Guide to the Human Genome
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Name: GABRR2 Sequence: fasta or formatted (490aa) NCBI GI: 153266866
Description:

gamma-aminobutyric acid (GABA) receptor, rho 2 precursor

Referenced in:

GABA and Glycine

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.9         24           2
 C cysteine            1.4          7           1
 D aspartate           5.1         25           1
 E glutamate           4.3         21           3
 F phenylalanine       6.9         34           3
 G glycine             4.5         22           2
 H histidine           2.9         14           1
 I isoleucine          4.9         24           2
 K lysine              6.3         31           2
 L leucine            10.0         49           2
 M methionine          4.3         21           2
 N asparagine          2.7         13           1
 P proline             3.7         18           1
 Q glutamine           2.4         12           2
 R arginine            5.9         29           2
 S serine              8.6         42           2
 T threonine           7.1         35           3
 V valine              7.6         37           2
 W tryptophan          2.0         10           1
 Y tyrosine            4.5         22           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   gamma-aminobutyric acid (GABA) receptor, rho 2 prec... 
GABRR1                0.662   gamma-aminobutyric acid (GABA) receptor, rho 1 [Hom...
GABRR3                0.535   gamma-aminobutyric acid (GABA) receptor, rho 3 [Hom...
GABRB3                0.308   gamma-aminobutyric acid (GABA) A receptor, beta 3 is...
GABRB3                0.308   gamma-aminobutyric acid (GABA) A receptor, beta 3 iso...
GABRB1                0.300   gamma-aminobutyric acid (GABA) A receptor, beta 1 p...
GABRB2                0.298   gamma-aminobutyric acid (GABA) A receptor, beta 2 iso...
GABRD                 0.289   gamma-aminobutyric acid (GABA) A receptor, delta pre...
GABRB2                0.278   gamma-aminobutyric acid (GABA) A receptor, beta 2 is...
GABRP                 0.271   gamma-aminobutyric acid (GABA) A receptor, pi 
GLRA2                 0.258   glycine receptor, alpha 2 isoform B 
GLRA2                 0.257   glycine receptor, alpha 2 isoform A 
GLRA2                 0.257   glycine receptor, alpha 2 isoform A 
GLRA3                 0.256   glycine receptor, alpha 3 isoform a 
GLRA1                 0.254   glycine receptor, alpha 1 isoform 1 precursor [Homo...
GLRA3                 0.252   glycine receptor, alpha 3 isoform b 
GLRA1                 0.248   glycine receptor, alpha 1 isoform 2 precursor [Homo...
GLRA4                 0.240   glycine receptor, alpha 4 precursor 
GABRQ                 0.236   gamma-aminobutyric acid (GABA) receptor, theta precur...
GABRA6                0.235   gamma-aminobutyric acid A receptor, alpha 6 precurs...
GABRG2                0.229   gamma-aminobutyric acid A receptor, gamma 2 isoform ...
GABRG1                0.229   gamma-aminobutyric acid A receptor, gamma 1 precurso...
GABRG2                0.228   gamma-aminobutyric acid A receptor, gamma 2 isoform ...
GABRA5                0.221   gamma-aminobutyric acid (GABA) A receptor, alpha 5 pr...
GABRA2                0.220   gamma-aminobutyric acid A receptor, alpha 2 
GABRA2                0.220   gamma-aminobutyric acid A receptor, alpha 2 precurs...
GLRB                  0.220   glycine receptor, beta 
GABRG3                0.219   gamma-aminobutyric acid (GABA) A receptor, gamma 3 ...
GABRA4                0.215   gamma-aminobutyric acid A receptor, alpha 4 precurso...
GABRE                 0.214   gamma-aminobutyric acid (GABA) A receptor, epsilon p...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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