Guide to the Human Genome
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Name: GABRB2 Sequence: fasta or formatted (512aa) NCBI GI: 12548785
Description:

gamma-aminobutyric acid (GABA) A receptor, beta 2 isoform 1

Referenced in:

GABA and Glycine

Other entries for this name:
alt prot [474aa] gamma-aminobutyric acid (GABA) A receptor, beta 2 isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.1         31           2
 C cysteine            0.8          4           1
 D aspartate           6.2         32           2
 E glutamate           3.1         16           1
 F phenylalanine       4.9         25           2
 G glycine             4.7         24           2
 H histidine           1.2          6           1
 I isoleucine          7.0         36           2
 K lysine              5.3         27           2
 L leucine             9.6         49           2
 M methionine          3.7         19           2
 N asparagine          5.3         27           2
 P proline             4.3         22           2
 Q glutamine           2.7         14           2
 R arginine            7.0         36           3
 S serine              6.2         32           2
 T threonine           7.2         37           3
 V valine              7.0         36           2
 W tryptophan          2.0         10           1
 Y tyrosine            5.7         29           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   gamma-aminobutyric acid (GABA) A receptor, beta 2 is... 
GABRB2                0.902   gamma-aminobutyric acid (GABA) A receptor, beta 2 iso...
GABRB3                0.721   gamma-aminobutyric acid (GABA) A receptor, beta 3 iso...
GABRB1                0.717   gamma-aminobutyric acid (GABA) A receptor, beta 1 p...
GABRB3                0.701   gamma-aminobutyric acid (GABA) A receptor, beta 3 is...
GABRQ                 0.341   gamma-aminobutyric acid (GABA) receptor, theta precur...
GABRD                 0.302   gamma-aminobutyric acid (GABA) A receptor, delta pre...
GABRR1                0.274   gamma-aminobutyric acid (GABA) receptor, rho 1 [Hom...
GABRP                 0.271   gamma-aminobutyric acid (GABA) A receptor, pi 
GABRR2                0.267   gamma-aminobutyric acid (GABA) receptor, rho 2 prec...
GABRR3                0.264   gamma-aminobutyric acid (GABA) receptor, rho 3 [Hom...
GLRA3                 0.257   glycine receptor, alpha 3 isoform a 
GABRG2                0.254   gamma-aminobutyric acid A receptor, gamma 2 isoform ...
GABRG2                0.254   gamma-aminobutyric acid A receptor, gamma 2 isoform ...
GLRA2                 0.254   glycine receptor, alpha 2 isoform A 
GLRA2                 0.254   glycine receptor, alpha 2 isoform A 
GLRA2                 0.253   glycine receptor, alpha 2 isoform B 
GLRA3                 0.253   glycine receptor, alpha 3 isoform b 
GLRA1                 0.252   glycine receptor, alpha 1 isoform 1 precursor [Homo...
GLRA1                 0.252   glycine receptor, alpha 1 isoform 2 precursor [Homo...
GLRA4                 0.252   glycine receptor, alpha 4 precursor 
GABRG1                0.242   gamma-aminobutyric acid A receptor, gamma 1 precurso...
GABRA4                0.242   gamma-aminobutyric acid A receptor, alpha 4 precurso...
GABRG3                0.240   gamma-aminobutyric acid (GABA) A receptor, gamma 3 ...
GABRA2                0.234   gamma-aminobutyric acid A receptor, alpha 2 
GABRA2                0.234   gamma-aminobutyric acid A receptor, alpha 2 precurs...
GABRG2                0.232   gamma-aminobutyric acid A receptor, gamma 2 isoform...
GABRA1                0.231   gamma-aminobutyric acid (GABA) A receptor, alpha 1 ...
GABRA1                0.231   gamma-aminobutyric acid (GABA) A receptor, alpha 1 ...
GABRA1                0.231   gamma-aminobutyric acid (GABA) A receptor, alpha 1 ...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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