Guide to the Human Genome
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Name: GABRA4 Sequence: fasta or formatted (554aa) NCBI GI: 34452723
Description:

gamma-aminobutyric acid A receptor, alpha 4 precursor

Referenced in:

GABA and Glycine

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.2         40           2
 C cysteine            1.3          7           1
 D aspartate           2.9         16           1
 E glutamate           4.9         27           2
 F phenylalanine       4.9         27           2
 G glycine             5.1         28           2
 H histidine           1.4          8           1
 I isoleucine          5.4         30           1
 K lysine              6.3         35           2
 L leucine             6.7         37           2
 M methionine          4.2         23           2
 N asparagine          4.3         24           2
 P proline             6.5         36           3
 Q glutamine           2.3         13           1
 R arginine            5.4         30           2
 S serine             10.1         56           3
 T threonine           8.7         48           2
 V valine              7.8         43           2
 W tryptophan          1.1          6           1
 Y tyrosine            3.6         20           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   gamma-aminobutyric acid A receptor, alpha 4 precurso... 
GABRA6                0.511   gamma-aminobutyric acid A receptor, alpha 6 precurs...
GABRA3                0.449   gamma-aminobutyric acid A receptor, alpha 3 precursor...
GABRA1                0.428   gamma-aminobutyric acid (GABA) A receptor, alpha 1 ...
GABRA1                0.428   gamma-aminobutyric acid (GABA) A receptor, alpha 1 ...
GABRA1                0.428   gamma-aminobutyric acid (GABA) A receptor, alpha 1 ...
GABRA1                0.428   gamma-aminobutyric acid (GABA) A receptor, alpha 1 ...
GABRA1                0.428   gamma-aminobutyric acid (GABA) A receptor, alpha 1 ...
GABRA1                0.428   gamma-aminobutyric acid (GABA) A receptor, alpha 1 ...
GABRA1                0.428   gamma-aminobutyric acid (GABA) A receptor, alpha 1 p...
GABRA5                0.420   gamma-aminobutyric acid (GABA) A receptor, alpha 5 pr...
GABRA2                0.419   gamma-aminobutyric acid A receptor, alpha 2 
GABRA2                0.419   gamma-aminobutyric acid A receptor, alpha 2 precurs...
GABRG2                0.317   gamma-aminobutyric acid A receptor, gamma 2 isoform ...
GABRG2                0.317   gamma-aminobutyric acid A receptor, gamma 2 isoform ...
GABRG1                0.317   gamma-aminobutyric acid A receptor, gamma 1 precurso...
GABRG3                0.302   gamma-aminobutyric acid (GABA) A receptor, gamma 3 ...
GABRG2                0.297   gamma-aminobutyric acid A receptor, gamma 2 isoform...
GABRE                 0.258   gamma-aminobutyric acid (GABA) A receptor, epsilon p...
GABRB1                0.231   gamma-aminobutyric acid (GABA) A receptor, beta 1 p...
GABRB2                0.230   gamma-aminobutyric acid (GABA) A receptor, beta 2 iso...
GABRB2                0.227   gamma-aminobutyric acid (GABA) A receptor, beta 2 is...
GABRB3                0.225   gamma-aminobutyric acid (GABA) A receptor, beta 3 is...
GABRB3                0.225   gamma-aminobutyric acid (GABA) A receptor, beta 3 iso...
GLRA3                 0.220   glycine receptor, alpha 3 isoform b 
GLRA2                 0.219   glycine receptor, alpha 2 isoform A 
GLRA2                 0.219   glycine receptor, alpha 2 isoform A 
GLRA3                 0.219   glycine receptor, alpha 3 isoform a 
GLRA2                 0.219   glycine receptor, alpha 2 isoform B 
GLRA1                 0.214   glycine receptor, alpha 1 isoform 1 precursor [Homo...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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