Guide to the Human Genome
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Name: GABRG3 Sequence: fasta or formatted (467aa) NCBI GI: 110347416
Description:

gamma-aminobutyric acid (GABA) A receptor, gamma 3

Referenced in:

GABA and Glycine

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.3         20           2
 C cysteine            2.6         12           2
 D aspartate           5.4         25           1
 E glutamate           4.7         22           2
 F phenylalanine       4.9         23           2
 G glycine             3.0         14           1
 H histidine           1.3          6           1
 I isoleucine          7.1         33           1
 K lysine              4.9         23           2
 L leucine            11.1         52           5
 M methionine          3.0         14           1
 N asparagine          4.1         19           2
 P proline             4.5         21           3
 Q glutamine           2.8         13           1
 R arginine            5.4         25           2
 S serine              8.6         40           3
 T threonine           8.8         41           3
 V valine              5.6         26           2
 W tryptophan          2.8         13           1
 Y tyrosine            5.4         25           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   gamma-aminobutyric acid (GABA) A receptor, gamma 3 ... 
GABRG2                0.678   gamma-aminobutyric acid A receptor, gamma 2 isoform ...
GABRG2                0.675   gamma-aminobutyric acid A receptor, gamma 2 isoform ...
GABRG2                0.655   gamma-aminobutyric acid A receptor, gamma 2 isoform...
GABRG1                0.655   gamma-aminobutyric acid A receptor, gamma 1 precurso...
GABRE                 0.411   gamma-aminobutyric acid (GABA) A receptor, epsilon p...
GABRA6                0.370   gamma-aminobutyric acid A receptor, alpha 6 precurs...
GABRA3                0.353   gamma-aminobutyric acid A receptor, alpha 3 precursor...
GABRA4                0.349   gamma-aminobutyric acid A receptor, alpha 4 precurso...
GABRA5                0.347   gamma-aminobutyric acid (GABA) A receptor, alpha 5 pr...
GABRA1                0.343   gamma-aminobutyric acid (GABA) A receptor, alpha 1 ...
GABRA1                0.343   gamma-aminobutyric acid (GABA) A receptor, alpha 1 ...
GABRA1                0.343   gamma-aminobutyric acid (GABA) A receptor, alpha 1 ...
GABRA1                0.343   gamma-aminobutyric acid (GABA) A receptor, alpha 1 ...
GABRA1                0.343   gamma-aminobutyric acid (GABA) A receptor, alpha 1 ...
GABRA1                0.343   gamma-aminobutyric acid (GABA) A receptor, alpha 1 ...
GABRA1                0.343   gamma-aminobutyric acid (GABA) A receptor, alpha 1 p...
GABRA2                0.337   gamma-aminobutyric acid A receptor, alpha 2 
GABRA2                0.337   gamma-aminobutyric acid A receptor, alpha 2 precurs...
GABRB2                0.273   gamma-aminobutyric acid (GABA) A receptor, beta 2 iso...
GABRB1                0.263   gamma-aminobutyric acid (GABA) A receptor, beta 1 p...
GABRB3                0.263   gamma-aminobutyric acid (GABA) A receptor, beta 3 is...
GABRB3                0.263   gamma-aminobutyric acid (GABA) A receptor, beta 3 iso...
GABRB2                0.260   gamma-aminobutyric acid (GABA) A receptor, beta 2 is...
GABRD                 0.255   gamma-aminobutyric acid (GABA) A receptor, delta pre...
GLRA2                 0.249   glycine receptor, alpha 2 isoform A 
GLRA2                 0.249   glycine receptor, alpha 2 isoform A 
GLRA2                 0.249   glycine receptor, alpha 2 isoform B 
GLRA3                 0.246   glycine receptor, alpha 3 isoform a 
GLRA1                 0.245   glycine receptor, alpha 1 isoform 2 precursor [Homo...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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