Guide to the Human Genome
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Name: GABRA6 Sequence: fasta or formatted (453aa) NCBI GI: 157389018
Description:

gamma-aminobutyric acid A receptor, alpha 6 precursor

Referenced in:

GABA and Glycine

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.0         27           2
 C cysteine            1.1          5           1
 D aspartate           3.1         14           1
 E glutamate           5.3         24           2
 F phenylalanine       5.7         26           2
 G glycine             4.6         21           2
 H histidine           1.3          6           1
 I isoleucine          6.8         31           2
 K lysine              5.5         25           2
 L leucine             9.1         41           2
 M methionine          3.5         16           1
 N asparagine          4.2         19           2
 P proline             6.0         27           3
 Q glutamine           2.6         12           1
 R arginine            3.5         16           1
 S serine              9.1         41           3
 T threonine           8.6         39           2
 V valine              7.7         35           2
 W tryptophan          1.8          8           1
 Y tyrosine            4.4         20           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   gamma-aminobutyric acid A receptor, alpha 6 precurs... 
GABRA4                0.624   gamma-aminobutyric acid A receptor, alpha 4 precurso...
GABRA3                0.557   gamma-aminobutyric acid A receptor, alpha 3 precursor...
GABRA5                0.548   gamma-aminobutyric acid (GABA) A receptor, alpha 5 pr...
GABRA1                0.541   gamma-aminobutyric acid (GABA) A receptor, alpha 1 ...
GABRA1                0.541   gamma-aminobutyric acid (GABA) A receptor, alpha 1 ...
GABRA1                0.541   gamma-aminobutyric acid (GABA) A receptor, alpha 1 ...
GABRA1                0.541   gamma-aminobutyric acid (GABA) A receptor, alpha 1 ...
GABRA1                0.541   gamma-aminobutyric acid (GABA) A receptor, alpha 1 ...
GABRA1                0.541   gamma-aminobutyric acid (GABA) A receptor, alpha 1 ...
GABRA1                0.541   gamma-aminobutyric acid (GABA) A receptor, alpha 1 p...
GABRA2                0.536   gamma-aminobutyric acid A receptor, alpha 2 
GABRA2                0.536   gamma-aminobutyric acid A receptor, alpha 2 precurs...
GABRG2                0.417   gamma-aminobutyric acid A receptor, gamma 2 isoform ...
GABRG2                0.411   gamma-aminobutyric acid A receptor, gamma 2 isoform ...
GABRG1                0.406   gamma-aminobutyric acid A receptor, gamma 1 precurso...
GABRG3                0.391   gamma-aminobutyric acid (GABA) A receptor, gamma 3 ...
GABRG2                0.387   gamma-aminobutyric acid A receptor, gamma 2 isoform...
GABRE                 0.331   gamma-aminobutyric acid (GABA) A receptor, epsilon p...
GLRA1                 0.288   glycine receptor, alpha 1 isoform 1 precursor [Homo...
GLRA3                 0.286   glycine receptor, alpha 3 isoform a 
GLRA2                 0.285   glycine receptor, alpha 2 isoform A 
GLRA2                 0.285   glycine receptor, alpha 2 isoform A 
GLRA2                 0.284   glycine receptor, alpha 2 isoform B 
GLRA3                 0.284   glycine receptor, alpha 3 isoform b 
GLRA1                 0.279   glycine receptor, alpha 1 isoform 2 precursor [Homo...
GABRB1                0.269   gamma-aminobutyric acid (GABA) A receptor, beta 1 p...
GABRB2                0.267   gamma-aminobutyric acid (GABA) A receptor, beta 2 iso...
GABRB3                0.259   gamma-aminobutyric acid (GABA) A receptor, beta 3 is...
GABRR2                0.258   gamma-aminobutyric acid (GABA) receptor, rho 2 prec...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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