Guide to the Human Genome
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Name: GLRA1 Sequence: fasta or formatted (449aa) NCBI GI: 119372310
Description:

glycine receptor, alpha 1 isoform 2 precursor

Referenced in:

GABA and Glycine

Other entries for this name:
alt prot [457aa] glycine receptor, alpha 1 isoform 1 precursor
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.1         32           2
 C cysteine            1.6          7           1
 D aspartate           5.1         23           2
 E glutamate           4.9         22           2
 F phenylalanine       6.5         29           2
 G glycine             4.7         21           1
 H histidine           1.8          8           2
 I isoleucine          7.3         33           2
 K lysine              5.6         25           2
 L leucine             9.1         41           2
 M methionine          4.0         18           1
 N asparagine          5.3         24           2
 P proline             5.1         23           3
 Q glutamine           3.3         15           2
 R arginine            6.2         28           2
 S serine              7.1         32           2
 T threonine           4.9         22           2
 V valine              4.5         20           1
 W tryptophan          1.8          8           1
 Y tyrosine            4.0         18           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   glycine receptor, alpha 1 isoform 2 precursor [Homo... 
GLRA1                 0.992   glycine receptor, alpha 1 isoform 1 precursor [Homo...
GLRA3                 0.825   glycine receptor, alpha 3 isoform b 
GLRA3                 0.817   glycine receptor, alpha 3 isoform a 
GLRA2                 0.761   glycine receptor, alpha 2 isoform B 
GLRA2                 0.758   glycine receptor, alpha 2 isoform A 
GLRA2                 0.758   glycine receptor, alpha 2 isoform A 
GLRA4                 0.664   glycine receptor, alpha 4 precursor 
GLRB                  0.373   glycine receptor, beta 
GABRB1                0.293   gamma-aminobutyric acid (GABA) A receptor, beta 1 p...
GABRB3                0.293   gamma-aminobutyric acid (GABA) A receptor, beta 3 is...
GABRB3                0.292   gamma-aminobutyric acid (GABA) A receptor, beta 3 iso...
GABRB2                0.292   gamma-aminobutyric acid (GABA) A receptor, beta 2 iso...
GABRD                 0.292   gamma-aminobutyric acid (GABA) A receptor, delta pre...
GABRA2                0.290   gamma-aminobutyric acid A receptor, alpha 2 
GABRA2                0.290   gamma-aminobutyric acid A receptor, alpha 2 precurs...
GABRB2                0.287   gamma-aminobutyric acid (GABA) A receptor, beta 2 is...
GABRP                 0.279   gamma-aminobutyric acid (GABA) A receptor, pi 
GABRR1                0.279   gamma-aminobutyric acid (GABA) receptor, rho 1 [Hom...
GABRA6                0.278   gamma-aminobutyric acid A receptor, alpha 6 precurs...
GABRA5                0.278   gamma-aminobutyric acid (GABA) A receptor, alpha 5 pr...
GABRA3                0.276   gamma-aminobutyric acid A receptor, alpha 3 precursor...
GABRA1                0.274   gamma-aminobutyric acid (GABA) A receptor, alpha 1 ...
GABRA1                0.274   gamma-aminobutyric acid (GABA) A receptor, alpha 1 ...
GABRA1                0.274   gamma-aminobutyric acid (GABA) A receptor, alpha 1 ...
GABRA1                0.274   gamma-aminobutyric acid (GABA) A receptor, alpha 1 ...
GABRA1                0.274   gamma-aminobutyric acid (GABA) A receptor, alpha 1 ...
GABRA1                0.274   gamma-aminobutyric acid (GABA) A receptor, alpha 1 ...
GABRA1                0.274   gamma-aminobutyric acid (GABA) A receptor, alpha 1 p...
GABRR2                0.271   gamma-aminobutyric acid (GABA) receptor, rho 2 prec...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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