Guide to the Human Genome
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Name: GLRA2 Sequence: fasta or formatted (452aa) NCBI GI: 169646728
Description:

glycine receptor, alpha 2 isoform B

Referenced in:

GABA and Glycine

Other entries for this name:
alt prot [452aa] glycine receptor, alpha 2 isoform A
alt prot [452aa] glycine receptor, alpha 2 isoform A
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.2         28           2
 C cysteine            1.8          8           1
 D aspartate           6.2         28           2
 E glutamate           4.0         18           2
 F phenylalanine       6.9         31           2
 G glycine             4.4         20           1
 H histidine           2.0          9           1
 I isoleucine          6.2         28           2
 K lysine              6.6         30           3
 L leucine            10.0         45           2
 M methionine          3.1         14           1
 N asparagine          4.9         22           1
 P proline             4.6         21           2
 Q glutamine           3.8         17           2
 R arginine            5.8         26           3
 S serine              6.6         30           2
 T threonine           6.4         29           2
 V valine              5.5         25           1
 W tryptophan          1.5          7           1
 Y tyrosine            3.5         16           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   glycine receptor, alpha 2 isoform B 
GLRA2                 0.998   glycine receptor, alpha 2 isoform A 
GLRA2                 0.998   glycine receptor, alpha 2 isoform A 
GLRA3                 0.782   glycine receptor, alpha 3 isoform b 
GLRA3                 0.777   glycine receptor, alpha 3 isoform a 
GLRA1                 0.756   glycine receptor, alpha 1 isoform 2 precursor [Homo...
GLRA1                 0.751   glycine receptor, alpha 1 isoform 1 precursor [Homo...
GLRA4                 0.705   glycine receptor, alpha 4 precursor 
GLRB                  0.390   glycine receptor, beta 
GABRB3                0.298   gamma-aminobutyric acid (GABA) A receptor, beta 3 is...
GABRB3                0.296   gamma-aminobutyric acid (GABA) A receptor, beta 3 iso...
GABRB1                0.296   gamma-aminobutyric acid (GABA) A receptor, beta 1 p...
GABRD                 0.295   gamma-aminobutyric acid (GABA) A receptor, delta pre...
GABRB2                0.294   gamma-aminobutyric acid (GABA) A receptor, beta 2 iso...
GABRB2                0.286   gamma-aminobutyric acid (GABA) A receptor, beta 2 is...
GABRA6                0.280   gamma-aminobutyric acid A receptor, alpha 6 precurs...
GABRA2                0.280   gamma-aminobutyric acid A receptor, alpha 2 
GABRA2                0.280   gamma-aminobutyric acid A receptor, alpha 2 precurs...
GABRR2                0.280   gamma-aminobutyric acid (GABA) receptor, rho 2 prec...
GABRR1                0.279   gamma-aminobutyric acid (GABA) receptor, rho 1 [Hom...
GABRA1                0.279   gamma-aminobutyric acid (GABA) A receptor, alpha 1 ...
GABRA1                0.279   gamma-aminobutyric acid (GABA) A receptor, alpha 1 ...
GABRA1                0.279   gamma-aminobutyric acid (GABA) A receptor, alpha 1 ...
GABRA1                0.279   gamma-aminobutyric acid (GABA) A receptor, alpha 1 ...
GABRA1                0.279   gamma-aminobutyric acid (GABA) A receptor, alpha 1 ...
GABRA1                0.279   gamma-aminobutyric acid (GABA) A receptor, alpha 1 ...
GABRA1                0.279   gamma-aminobutyric acid (GABA) A receptor, alpha 1 p...
GABRA5                0.278   gamma-aminobutyric acid (GABA) A receptor, alpha 5 pr...
GABRP                 0.278   gamma-aminobutyric acid (GABA) A receptor, pi 
GABRA3                0.273   gamma-aminobutyric acid A receptor, alpha 3 precursor...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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