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Search of human proteins with 153251766
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|153251766 hypothetical protein LOC56181 isoform a [Homo
sapiens]
(292 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|153251766 hypothetical protein LOC56181 isoform a [Homo sapiens] 579 e-165
gi|153251748 hypothetical protein LOC56181 isoform a [Homo sapiens] 579 e-165
gi|153251745 hypothetical protein LOC56181 isoform a [Homo sapiens] 579 e-165
gi|153251771 hypothetical protein LOC56181 isoform b [Homo sapiens] 302 2e-82
gi|149999350 DUF729 domain containing 1 [Homo sapiens] 97 2e-20
gi|39653315 DUF729 domain containing 1 [Homo sapiens] 97 2e-20
gi|224994164 mitochondrial fission regulator 1 isoform 3 [Homo s... 91 9e-19
gi|224994160 mitochondrial fission regulator 1 isoform 1 [Homo s... 91 9e-19
gi|224994162 mitochondrial fission regulator 1 isoform 2 [Homo s... 62 6e-10
gi|156766068 CDC42 binding protein kinase gamma (DMPK-like) [Hom... 34 0.13
gi|239752529 PREDICTED: similar to mucin [Homo sapiens] 34 0.17
gi|24430146 nucleoporin 153kDa [Homo sapiens] 33 0.39
gi|27436948 lamin A/C isoform 3 [Homo sapiens] 33 0.39
gi|5031875 lamin A/C isoform 2 [Homo sapiens] 33 0.39
gi|27436946 lamin A/C isoform 1 precursor [Homo sapiens] 33 0.39
gi|122937400 odz, odd Oz/ten-m homolog 3 [Homo sapiens] 32 0.66
gi|102469037 jun D proto-oncogene [Homo sapiens] 31 1.5
gi|169217460 PREDICTED: similar to Mucin-6, partial [Homo sapiens] 31 1.5
gi|19924175 axonal transport of synaptic vesicles [Homo sapiens] 31 1.5
gi|21217561 Shaw-related voltage-gated potassium channel protein... 31 1.5
gi|21217563 Shaw-related voltage-gated potassium channel protein... 31 1.5
gi|24497458 Shaw-related voltage-gated potassium channel protein... 31 1.5
gi|110347400 odz, odd Oz/ten-m homolog 1 isoform 3 [Homo sapiens] 30 1.9
gi|253970446 odz, odd Oz/ten-m homolog 1 isoform 2 [Homo sapiens] 30 1.9
gi|253970444 odz, odd Oz/ten-m homolog 1 isoform 1 [Homo sapiens] 30 1.9
gi|226371620 transcription factor 7-like 2 isoform 3 [Homo sapiens] 30 1.9
gi|169790958 methionine synthase reductase isoform 1 [Homo sapiens] 30 1.9
gi|169790956 methionine synthase reductase isoform 2 [Homo sapiens] 30 1.9
gi|4507869 vasodilator-stimulated phosphoprotein [Homo sapiens] 30 1.9
gi|115298663 SCL/TAL1 interrupting locus isoform 1 [Homo sapiens] 30 1.9
>gi|153251766 hypothetical protein LOC56181 isoform a [Homo sapiens]
Length = 292
Score = 579 bits (1492), Expect = e-165
Identities = 292/292 (100%), Positives = 292/292 (100%)
Query: 1 MSGMEATVTIPIWQNKPHGAARSVVRRIGTNLPLKPCARASFETLPNISDLCLRDVPPVP 60
MSGMEATVTIPIWQNKPHGAARSVVRRIGTNLPLKPCARASFETLPNISDLCLRDVPPVP
Sbjct: 1 MSGMEATVTIPIWQNKPHGAARSVVRRIGTNLPLKPCARASFETLPNISDLCLRDVPPVP 60
Query: 61 TLADIAWIAADEEETYARVRSDTRPLRHTWKPSPLIVMQRNASVPNLRGSEERLLALKKP 120
TLADIAWIAADEEETYARVRSDTRPLRHTWKPSPLIVMQRNASVPNLRGSEERLLALKKP
Sbjct: 61 TLADIAWIAADEEETYARVRSDTRPLRHTWKPSPLIVMQRNASVPNLRGSEERLLALKKP 120
Query: 121 ALPALSRTTELQDELSHLRSQIAKIVAADAASASLTPDFLSPGSSNVSSPLPCFGSSFHS 180
ALPALSRTTELQDELSHLRSQIAKIVAADAASASLTPDFLSPGSSNVSSPLPCFGSSFHS
Sbjct: 121 ALPALSRTTELQDELSHLRSQIAKIVAADAASASLTPDFLSPGSSNVSSPLPCFGSSFHS 180
Query: 181 TTSFVISDITEETEVEVPELPSVPLLCSASPECCKPEHKAACSSSEEDDCVSLSKASSFA 240
TTSFVISDITEETEVEVPELPSVPLLCSASPECCKPEHKAACSSSEEDDCVSLSKASSFA
Sbjct: 181 TTSFVISDITEETEVEVPELPSVPLLCSASPECCKPEHKAACSSSEEDDCVSLSKASSFA 240
Query: 241 DMMGILKDFHRMKQSQDLNRSLLKEEDPAVLISEVLRRKFALKEEDISRKGN 292
DMMGILKDFHRMKQSQDLNRSLLKEEDPAVLISEVLRRKFALKEEDISRKGN
Sbjct: 241 DMMGILKDFHRMKQSQDLNRSLLKEEDPAVLISEVLRRKFALKEEDISRKGN 292
>gi|153251748 hypothetical protein LOC56181 isoform a [Homo sapiens]
Length = 292
Score = 579 bits (1492), Expect = e-165
Identities = 292/292 (100%), Positives = 292/292 (100%)
Query: 1 MSGMEATVTIPIWQNKPHGAARSVVRRIGTNLPLKPCARASFETLPNISDLCLRDVPPVP 60
MSGMEATVTIPIWQNKPHGAARSVVRRIGTNLPLKPCARASFETLPNISDLCLRDVPPVP
Sbjct: 1 MSGMEATVTIPIWQNKPHGAARSVVRRIGTNLPLKPCARASFETLPNISDLCLRDVPPVP 60
Query: 61 TLADIAWIAADEEETYARVRSDTRPLRHTWKPSPLIVMQRNASVPNLRGSEERLLALKKP 120
TLADIAWIAADEEETYARVRSDTRPLRHTWKPSPLIVMQRNASVPNLRGSEERLLALKKP
Sbjct: 61 TLADIAWIAADEEETYARVRSDTRPLRHTWKPSPLIVMQRNASVPNLRGSEERLLALKKP 120
Query: 121 ALPALSRTTELQDELSHLRSQIAKIVAADAASASLTPDFLSPGSSNVSSPLPCFGSSFHS 180
ALPALSRTTELQDELSHLRSQIAKIVAADAASASLTPDFLSPGSSNVSSPLPCFGSSFHS
Sbjct: 121 ALPALSRTTELQDELSHLRSQIAKIVAADAASASLTPDFLSPGSSNVSSPLPCFGSSFHS 180
Query: 181 TTSFVISDITEETEVEVPELPSVPLLCSASPECCKPEHKAACSSSEEDDCVSLSKASSFA 240
TTSFVISDITEETEVEVPELPSVPLLCSASPECCKPEHKAACSSSEEDDCVSLSKASSFA
Sbjct: 181 TTSFVISDITEETEVEVPELPSVPLLCSASPECCKPEHKAACSSSEEDDCVSLSKASSFA 240
Query: 241 DMMGILKDFHRMKQSQDLNRSLLKEEDPAVLISEVLRRKFALKEEDISRKGN 292
DMMGILKDFHRMKQSQDLNRSLLKEEDPAVLISEVLRRKFALKEEDISRKGN
Sbjct: 241 DMMGILKDFHRMKQSQDLNRSLLKEEDPAVLISEVLRRKFALKEEDISRKGN 292
>gi|153251745 hypothetical protein LOC56181 isoform a [Homo sapiens]
Length = 292
Score = 579 bits (1492), Expect = e-165
Identities = 292/292 (100%), Positives = 292/292 (100%)
Query: 1 MSGMEATVTIPIWQNKPHGAARSVVRRIGTNLPLKPCARASFETLPNISDLCLRDVPPVP 60
MSGMEATVTIPIWQNKPHGAARSVVRRIGTNLPLKPCARASFETLPNISDLCLRDVPPVP
Sbjct: 1 MSGMEATVTIPIWQNKPHGAARSVVRRIGTNLPLKPCARASFETLPNISDLCLRDVPPVP 60
Query: 61 TLADIAWIAADEEETYARVRSDTRPLRHTWKPSPLIVMQRNASVPNLRGSEERLLALKKP 120
TLADIAWIAADEEETYARVRSDTRPLRHTWKPSPLIVMQRNASVPNLRGSEERLLALKKP
Sbjct: 61 TLADIAWIAADEEETYARVRSDTRPLRHTWKPSPLIVMQRNASVPNLRGSEERLLALKKP 120
Query: 121 ALPALSRTTELQDELSHLRSQIAKIVAADAASASLTPDFLSPGSSNVSSPLPCFGSSFHS 180
ALPALSRTTELQDELSHLRSQIAKIVAADAASASLTPDFLSPGSSNVSSPLPCFGSSFHS
Sbjct: 121 ALPALSRTTELQDELSHLRSQIAKIVAADAASASLTPDFLSPGSSNVSSPLPCFGSSFHS 180
Query: 181 TTSFVISDITEETEVEVPELPSVPLLCSASPECCKPEHKAACSSSEEDDCVSLSKASSFA 240
TTSFVISDITEETEVEVPELPSVPLLCSASPECCKPEHKAACSSSEEDDCVSLSKASSFA
Sbjct: 181 TTSFVISDITEETEVEVPELPSVPLLCSASPECCKPEHKAACSSSEEDDCVSLSKASSFA 240
Query: 241 DMMGILKDFHRMKQSQDLNRSLLKEEDPAVLISEVLRRKFALKEEDISRKGN 292
DMMGILKDFHRMKQSQDLNRSLLKEEDPAVLISEVLRRKFALKEEDISRKGN
Sbjct: 241 DMMGILKDFHRMKQSQDLNRSLLKEEDPAVLISEVLRRKFALKEEDISRKGN 292
>gi|153251771 hypothetical protein LOC56181 isoform b [Homo sapiens]
Length = 205
Score = 302 bits (774), Expect = 2e-82
Identities = 162/216 (75%), Positives = 173/216 (80%), Gaps = 16/216 (7%)
Query: 1 MSGMEATVTIPIWQNKPHGAARSVVRRIGTNLPLKPCARASFETLPNISDLCLRDVPPVP 60
MSGMEATVTIPIWQNKPHGAARSVVRRIGTNLPLKPCARASFETLPNISDLCLRDVPPVP
Sbjct: 1 MSGMEATVTIPIWQNKPHGAARSVVRRIGTNLPLKPCARASFETLPNISDLCLRDVPPVP 60
Query: 61 TLADIAWIAADEEETYARVRSDTRPLRHTWKPSPLIVMQRNASVPNLRGSEERLLALKKP 120
TLADIAWIAADEEETYARVRSDTRPLRHTWKPSPLIVMQRNASVPNLRGSEERLLALKKP
Sbjct: 61 TLADIAWIAADEEETYARVRSDTRPLRHTWKPSPLIVMQRNASVPNLRGSEERLLALKKP 120
Query: 121 ALPALSRTTELQDELSHLRSQIAKIVAADAASASLTPDFLSPGSSNVSSPLPCFGSSFHS 180
ALPALSRTTELQDELSHLRSQIAKIVAADA ++ + S SFH
Sbjct: 121 ALPALSRTTELQDELSHLRSQIAKIVAADAVTSPRRQRWRS--------------LSFHQ 166
Query: 181 TTSFVISDITEETEVEVPELPSVPLLCSASPECCKP 216
+ FV+ + + +LP+V L + C +P
Sbjct: 167 SPCFVLPALNVAN--QNTKLPAVRLKRMTASLCPRP 200
>gi|149999350 DUF729 domain containing 1 [Homo sapiens]
Length = 385
Score = 96.7 bits (239), Expect = 2e-20
Identities = 95/334 (28%), Positives = 140/334 (41%), Gaps = 60/334 (17%)
Query: 3 GMEATVTIPIWQNKPHGAARSVVRRIGTNLPLKPCARASFETLPNI----SDLCLRDVPP 58
G+ + IW+NK +G+ RS+VR IG LPL+PC R +FE +P + SD C
Sbjct: 16 GVPVEQVLLIWENKDYGSTRSIVRIIGKMLPLEPCRRPNFELIPLLNSVDSDNC---GSM 72
Query: 59 VPTLADIAWIAADEEETYARVRSDT-----------RPLRHTWKPSPLIVMQRNASVPNL 107
VP+ ADI ++A DEE +Y R R+ PLR P V Q+ +L
Sbjct: 73 VPSFADILYVANDEEASYLRFRNSIWKNEEEKVEIFHPLRLVRDPLSPAVRQKETVKNDL 132
Query: 108 RGSEERLLALKKPALPALSRTTELQDELSHLRSQIAKIVAADAASASLTPDFLSPGSSNV 167
+E A+ + L++EL+ LRSQIA IV S S G S+
Sbjct: 133 PVNE-----------AAIRKIAALENELTFLRSQIAAIVEMQELKNSTNSS--SFGLSDE 179
Query: 168 SSPLPCFGSSFHSTTSFVISDITEETEVEVPELPSVPLLCSASPECCKPEHKAACSSSEE 227
L SS + S + P P P S P C P + + +
Sbjct: 180 RISLGQLSSSRAAHLSVDPDQLPGSVLSPPPPPPLPPQFSSLQPPCFPPVQPGSNNICDS 239
Query: 228 DD-CVSLSKASSFA------------------DMMGILKDFHRMK----QSQDLNRSLLK 264
D+ +SK + A +M+ +LKD +++K + R + K
Sbjct: 240 DNPATEMSKQNPAANKTNYSHHSKSQRNKDIPNMLDVLKDMNKVKLRAIERSPGGRPIHK 299
Query: 265 EE------DPAVLISEVLRRKFALKEEDISRKGN 292
+ DP LIS L++KFA +E+D K N
Sbjct: 300 RKRQNSHWDPVSLISHALKQKFAFQEDDSFEKEN 333
>gi|39653315 DUF729 domain containing 1 [Homo sapiens]
Length = 385
Score = 96.7 bits (239), Expect = 2e-20
Identities = 95/334 (28%), Positives = 140/334 (41%), Gaps = 60/334 (17%)
Query: 3 GMEATVTIPIWQNKPHGAARSVVRRIGTNLPLKPCARASFETLPNI----SDLCLRDVPP 58
G+ + IW+NK +G+ RS+VR IG LPL+PC R +FE +P + SD C
Sbjct: 16 GVPVEQVLLIWENKDYGSTRSIVRIIGKMLPLEPCRRPNFELIPLLNSVDSDNC---GSM 72
Query: 59 VPTLADIAWIAADEEETYARVRSDT-----------RPLRHTWKPSPLIVMQRNASVPNL 107
VP+ ADI ++A DEE +Y R R+ PLR P V Q+ +L
Sbjct: 73 VPSFADILYVANDEEASYLRFRNSIWKNEEEKVEIFHPLRLVRDPLSPAVRQKETVKNDL 132
Query: 108 RGSEERLLALKKPALPALSRTTELQDELSHLRSQIAKIVAADAASASLTPDFLSPGSSNV 167
+E A+ + L++EL+ LRSQIA IV S S G S+
Sbjct: 133 PVNE-----------AAIRKIAALENELTFLRSQIAAIVEMQELKNSTNSS--SFGLSDE 179
Query: 168 SSPLPCFGSSFHSTTSFVISDITEETEVEVPELPSVPLLCSASPECCKPEHKAACSSSEE 227
L SS + S + P P P S P C P + + +
Sbjct: 180 RISLGQLSSSRAAHLSVDPDQLPGSVLSPPPPPPLPPQFSSLQPPCFPPVQPGSNNICDS 239
Query: 228 DD-CVSLSKASSFA------------------DMMGILKDFHRMK----QSQDLNRSLLK 264
D+ +SK + A +M+ +LKD +++K + R + K
Sbjct: 240 DNPATEMSKQNPAANKTNYSHHSKSQRNKDIPNMLDVLKDMNKVKLRAIERSPGGRPIHK 299
Query: 265 EE------DPAVLISEVLRRKFALKEEDISRKGN 292
+ DP LIS L++KFA +E+D K N
Sbjct: 300 RKRQNSHWDPVSLISHALKQKFAFQEDDSFEKEN 333
>gi|224994164 mitochondrial fission regulator 1 isoform 3 [Homo
sapiens]
Length = 348
Score = 91.3 bits (225), Expect = 9e-19
Identities = 88/296 (29%), Positives = 136/296 (45%), Gaps = 58/296 (19%)
Query: 12 IWQNKPHGAARSVVRRIGTNLPLKPCARASFETLPNISDLCLR--DVPPVPTLADIAWIA 69
+W KP+G++RS+VR+IGTNL L C R F+ + ++ V + AD+ W+A
Sbjct: 24 LWSRKPYGSSRSIVRKIGTNLSLIQCPRVQFQINSHATEWSPSHPGEDAVASFADVGWVA 83
Query: 70 ADEEETYARVRSDTR---PLRHT---WKPSPLIVMQRNASVPNLRGSEERLLALKKPAL- 122
+E E AR+R++ R PL+ ++ +P R S+P+L E + LK PAL
Sbjct: 84 KEEGECSARLRTEVRSRPPLQDDLLFFEKAP----SRQISLPDLSQEEPQ---LKTPALA 136
Query: 123 --PALSRTTELQDELSHLRSQIAKIVAADAAS-------ASLTPDFLSPGSSNVSSPLPC 173
AL + L++EL+ LR+QIAKIV S T + P PLP
Sbjct: 137 NEEALQKICALENELAALRAQIAKIVTQQEQQNLTAGDLDSTTFGTIPPHPPPPPPPLPP 196
Query: 174 FGSSFHSTTSFVISDITEETEVEVPELPSVPLLCSASPECCKPEHKAACSSSEEDDCVSL 233
H +TS V D+ +E + + L +P+ KPE
Sbjct: 197 PALGLHQSTSAV--DLIKERREK--RANAGKTLVKNNPK--KPE---------------- 234
Query: 234 SKASSFADMMGILKDFHRMK------QSQDLNRSLLKEEDPAVLISEVLRRKFALK 283
+M+ ILK+ + +K QD+ + DPA LI+E L++KFA +
Sbjct: 235 -----MPNMLEILKEMNSVKLRSVKRSEQDVKPKPVDATDPAALIAEALKKKFAYR 285
>gi|224994160 mitochondrial fission regulator 1 isoform 1 [Homo
sapiens]
Length = 333
Score = 91.3 bits (225), Expect = 9e-19
Identities = 88/296 (29%), Positives = 136/296 (45%), Gaps = 58/296 (19%)
Query: 12 IWQNKPHGAARSVVRRIGTNLPLKPCARASFETLPNISDLCLR--DVPPVPTLADIAWIA 69
+W KP+G++RS+VR+IGTNL L C R F+ + ++ V + AD+ W+A
Sbjct: 24 LWSRKPYGSSRSIVRKIGTNLSLIQCPRVQFQINSHATEWSPSHPGEDAVASFADVGWVA 83
Query: 70 ADEEETYARVRSDTR---PLRHT---WKPSPLIVMQRNASVPNLRGSEERLLALKKPAL- 122
+E E AR+R++ R PL+ ++ +P R S+P+L E + LK PAL
Sbjct: 84 KEEGECSARLRTEVRSRPPLQDDLLFFEKAP----SRQISLPDLSQEEPQ---LKTPALA 136
Query: 123 --PALSRTTELQDELSHLRSQIAKIVAADAAS-------ASLTPDFLSPGSSNVSSPLPC 173
AL + L++EL+ LR+QIAKIV S T + P PLP
Sbjct: 137 NEEALQKICALENELAALRAQIAKIVTQQEQQNLTAGDLDSTTFGTIPPHPPPPPPPLPP 196
Query: 174 FGSSFHSTTSFVISDITEETEVEVPELPSVPLLCSASPECCKPEHKAACSSSEEDDCVSL 233
H +TS V D+ +E + + L +P+ KPE
Sbjct: 197 PALGLHQSTSAV--DLIKERREK--RANAGKTLVKNNPK--KPE---------------- 234
Query: 234 SKASSFADMMGILKDFHRMK------QSQDLNRSLLKEEDPAVLISEVLRRKFALK 283
+M+ ILK+ + +K QD+ + DPA LI+E L++KFA +
Sbjct: 235 -----MPNMLEILKEMNSVKLRSVKRSEQDVKPKPVDATDPAALIAEALKKKFAYR 285
>gi|224994162 mitochondrial fission regulator 1 isoform 2 [Homo
sapiens]
Length = 300
Score = 62.0 bits (149), Expect = 6e-10
Identities = 71/247 (28%), Positives = 109/247 (44%), Gaps = 56/247 (22%)
Query: 59 VPTLADIAWIAADEEETYARVRSDTR---PLRHT---WKPSPLIVMQRNASVPNLRGSEE 112
V + AD+ W+A +E E AR+R++ R PL+ ++ +P R S+P+L E
Sbjct: 40 VASFADVGWVAKEEGECSARLRTEVRSRPPLQDDLLFFEKAP----SRQISLPDLSQEEP 95
Query: 113 RLLALKKPALP---ALSRTTELQDELSHLRSQIAKIVAADAAS-------ASLTPDFLSP 162
+L K PAL AL + L++EL+ LR+QIAKIV S T + P
Sbjct: 96 QL---KTPALANEEALQKICALENELAALRAQIAKIVTQQEQQNLTAGDLDSTTFGTIPP 152
Query: 163 GSSNVSSPLPCFGSSFHSTTSFVISDITEETEVEVPELPSVPLLCSASPECCKPEHKAAC 222
PLP H +TS V D+ +E + + L +P+ KPE
Sbjct: 153 HPPPPPPPLPPPALGLHQSTSAV--DLIKERREK--RANAGKTLVKNNPK--KPE----- 201
Query: 223 SSSEEDDCVSLSKASSFADMMGILKDFHRMK------QSQDLNRSLLKEEDPAVLISEVL 276
+M+ ILK+ + +K QD+ + DPA LI+E L
Sbjct: 202 ----------------MPNMLEILKEMNSVKLRSVKRSEQDVKPKPVDATDPAALIAEAL 245
Query: 277 RRKFALK 283
++KFA +
Sbjct: 246 KKKFAYR 252
>gi|156766068 CDC42 binding protein kinase gamma (DMPK-like) [Homo
sapiens]
Length = 1551
Score = 34.3 bits (77), Expect = 0.13
Identities = 37/128 (28%), Positives = 54/128 (42%), Gaps = 20/128 (15%)
Query: 62 LADIAWIAADEEETYARVRSDT---RPLRHTWKPSPLIVMQRN----------ASVPNLR 108
L +A A+E E+ V + T RPL H WK L M+ + A + +
Sbjct: 698 LQALATKMAEELESLRNVGTQTLPARPLDHQWKARRLQKMEASARLELQSALEAEIRAKQ 757
Query: 109 GSEERLLALKKPALPALSRTTE-------LQDELSHLRSQIAKIVAADAASASLTPDFLS 161
G +ERL +++ L A R E LQ EL+ LR ++ D ++ FLS
Sbjct: 758 GLQERLTQVQEAQLQAERRLQEAEKQSQALQQELAMLREELRARGPVDTKPSNSLIPFLS 817
Query: 162 PGSSNVSS 169
SS S
Sbjct: 818 FRSSEKDS 825
>gi|239752529 PREDICTED: similar to mucin [Homo sapiens]
Length = 594
Score = 33.9 bits (76), Expect = 0.17
Identities = 26/93 (27%), Positives = 42/93 (45%), Gaps = 14/93 (15%)
Query: 120 PALPALSRTTELQDELSHLRSQIAKIVAADAASASLTPDF---------LSPGSSNVSSP 170
P+L +L TT SH + +V + ++ TP F S + +++S
Sbjct: 273 PSLTSLITTT----NTSHSTPSLTSLVTSTETASHSTPSFTSLITTIEATSHSTPSLTSS 328
Query: 171 LPCFGSSFHSTTSFV-ISDITEETEVEVPELPS 202
+ G++ HST SF ++ ITE T P L S
Sbjct: 329 ITTTGTTSHSTPSFTYLTTITESTSHSTPSLTS 361
>gi|24430146 nucleoporin 153kDa [Homo sapiens]
Length = 1475
Score = 32.7 bits (73), Expect = 0.39
Identities = 22/58 (37%), Positives = 31/58 (53%), Gaps = 3/58 (5%)
Query: 157 PDFLSPGSSNVSSPLPCFGSSFH-STTSFVISDITEETEVEVPELP--SVPLLCSASP 211
P+F P ++ +SS + G T FV S EE E+EVP LP S+P+ S+ P
Sbjct: 428 PNFSLPAANGLSSGVGGGGGKMRRERTRFVASKPLEEEEMEVPVLPKISLPITSSSLP 485
Score = 30.4 bits (67), Expect = 1.9
Identities = 26/88 (29%), Positives = 37/88 (42%), Gaps = 9/88 (10%)
Query: 124 ALSRTTELQDELSHLRSQIAKIVAADAASASLTPDFLSPGSSNVSSPLPCFGSSFHSTTS 183
A T E S L SQ +K+ + ++TP PG+S+ ++ FG +T+S
Sbjct: 1239 AFGNTAESSTSQSLLFSQDSKLATTSSTGTAVTPFVFGPGASSNNTTTSGFGFGATTTSS 1298
Query: 184 FVISDITEETEVEVPELPSVPLLCSASP 211
S T PS P SASP
Sbjct: 1299 SAGSSFVFGTG------PSAP---SASP 1317
>gi|27436948 lamin A/C isoform 3 [Homo sapiens]
Length = 634
Score = 32.7 bits (73), Expect = 0.39
Identities = 34/91 (37%), Positives = 47/91 (51%), Gaps = 9/91 (9%)
Query: 61 TLADIAWIAADEEETYARVRSDTRPL--RHTWKPSPLIVMQRNASVPNLRGSEERLLALK 118
TL +A A + ++VR + + L R+T K LI Q A + +L E LL K
Sbjct: 91 TLDSVAKERARLQLELSKVREEFKELKARNTKKEGDLIAAQ--ARLKDL----EALLNSK 144
Query: 119 KPALP-ALSRTTELQDELSHLRSQIAKIVAA 148
+ AL ALS L+ EL LR Q+AK+ AA
Sbjct: 145 EAALSTALSEKRTLEGELHDLRGQVAKLEAA 175
>gi|5031875 lamin A/C isoform 2 [Homo sapiens]
Length = 572
Score = 32.7 bits (73), Expect = 0.39
Identities = 34/91 (37%), Positives = 47/91 (51%), Gaps = 9/91 (9%)
Query: 61 TLADIAWIAADEEETYARVRSDTRPL--RHTWKPSPLIVMQRNASVPNLRGSEERLLALK 118
TL +A A + ++VR + + L R+T K LI Q A + +L E LL K
Sbjct: 91 TLDSVAKERARLQLELSKVREEFKELKARNTKKEGDLIAAQ--ARLKDL----EALLNSK 144
Query: 119 KPALP-ALSRTTELQDELSHLRSQIAKIVAA 148
+ AL ALS L+ EL LR Q+AK+ AA
Sbjct: 145 EAALSTALSEKRTLEGELHDLRGQVAKLEAA 175
>gi|27436946 lamin A/C isoform 1 precursor [Homo sapiens]
Length = 664
Score = 32.7 bits (73), Expect = 0.39
Identities = 34/91 (37%), Positives = 47/91 (51%), Gaps = 9/91 (9%)
Query: 61 TLADIAWIAADEEETYARVRSDTRPL--RHTWKPSPLIVMQRNASVPNLRGSEERLLALK 118
TL +A A + ++VR + + L R+T K LI Q A + +L E LL K
Sbjct: 91 TLDSVAKERARLQLELSKVREEFKELKARNTKKEGDLIAAQ--ARLKDL----EALLNSK 144
Query: 119 KPALP-ALSRTTELQDELSHLRSQIAKIVAA 148
+ AL ALS L+ EL LR Q+AK+ AA
Sbjct: 145 EAALSTALSEKRTLEGELHDLRGQVAKLEAA 175
>gi|122937400 odz, odd Oz/ten-m homolog 3 [Homo sapiens]
Length = 2699
Score = 32.0 bits (71), Expect = 0.66
Identities = 22/81 (27%), Positives = 32/81 (39%), Gaps = 8/81 (9%)
Query: 157 PDFLSPGSSNVSSPLPCFGSSFHSTTSFVISDITEETEVEVPELPSVPLLCSASPEC--- 213
P FL P S + P+ C G+ +S + + TE +VP + C C
Sbjct: 537 PGFLGPDCSRAACPVLCSGNGQYSKGRCLCFSGWKGTECDVPTTQCIDPQCGGRGICIMG 596
Query: 214 ---CKPEHKAACSSSEEDDCV 231
C +K S EE DC+
Sbjct: 597 SCACNSGYKG--ESCEEADCI 615
>gi|102469037 jun D proto-oncogene [Homo sapiens]
Length = 347
Score = 30.8 bits (68), Expect = 1.5
Identities = 23/90 (25%), Positives = 43/90 (47%), Gaps = 11/90 (12%)
Query: 56 VPPVPTLADIAWIAADEEETYARVRSDTRPLRHTWKPSPLIVMQRNASVPNLRGSEERLL 115
VP VP+ + ++ + +T R++++ + LR+ S R + + EE++
Sbjct: 246 VPDVPSFGESPPLSPIDMDTQERIKAERKRLRNRIAASKC----RKRKLERISRLEEKVK 301
Query: 116 ALKKPALPALSRTTELQDELSHLRSQIAKI 145
LK S+ TEL S LR Q+A++
Sbjct: 302 TLK-------SQNTELASTASLLREQVAQL 324
>gi|169217460 PREDICTED: similar to Mucin-6, partial [Homo sapiens]
Length = 350
Score = 30.8 bits (68), Expect = 1.5
Identities = 28/103 (27%), Positives = 44/103 (42%), Gaps = 5/103 (4%)
Query: 128 TTELQDELSHLRSQIAKIVAADAASASLTPDFL----SPGSSNVSSPLPCFGSSFHSTTS 183
TT++ + + S A S+ LT F S GSS VSS P +SF +TT+
Sbjct: 118 TTKITTNPTSIGSSTPMAHTTSATSSRLTTPFTTHSPSTGSSPVSSTGPMTATSFQTTTT 177
Query: 184 FVISDITEET-EVEVPELPSVPLLCSASPECCKPEHKAACSSS 225
+ +++ T VP + + S P + A S+S
Sbjct: 178 YPTPSLSQTTLPTYVPPFSTSLVTPSTHTVITPPRTQMATSAS 220
>gi|19924175 axonal transport of synaptic vesicles [Homo sapiens]
Length = 1690
Score = 30.8 bits (68), Expect = 1.5
Identities = 23/91 (25%), Positives = 41/91 (45%), Gaps = 1/91 (1%)
Query: 65 IAWIAADEEETYARVRSDTRPLRHTWKPSPLIVMQRNASVPNLRGSEERLLALKKPALPA 124
+A++ +E R RSD+ L H W+ L ++Q + E+L ++P A
Sbjct: 1352 VAYVRGEENLAGWRPRSDSLILDHQWELEKLSLLQEVEKTRHYLLLREKLETAQRPVPEA 1411
Query: 125 LSRTTELQDELSHLRSQIAKIVAADAASASL 155
LS +D SH S + ++A+ + L
Sbjct: 1412 LSPAFS-EDSESHGSSSASSPLSAEGRPSPL 1441
>gi|21217561 Shaw-related voltage-gated potassium channel protein 2
isoform KV3.2a [Homo sapiens]
Length = 613
Score = 30.8 bits (68), Expect = 1.5
Identities = 17/71 (23%), Positives = 34/71 (47%), Gaps = 7/71 (9%)
Query: 163 GSSNVSSPLPCFGSSFHSTTSFVISD--ITEETEVEVPELPSVPLLCSASPECCKPEHKA 220
G ++ P+P ++F S ++ + + + +P P ++SP CK E
Sbjct: 461 GVLTIAMPVPVIVNNFGMYYSLAMAKQKLPRKRKKHIPPAPQ-----ASSPTFCKTELNM 515
Query: 221 ACSSSEEDDCV 231
AC+S++ D C+
Sbjct: 516 ACNSTQSDTCL 526
>gi|21217563 Shaw-related voltage-gated potassium channel protein 2
isoform KV3.2b [Homo sapiens]
Length = 638
Score = 30.8 bits (68), Expect = 1.5
Identities = 17/71 (23%), Positives = 34/71 (47%), Gaps = 7/71 (9%)
Query: 163 GSSNVSSPLPCFGSSFHSTTSFVISD--ITEETEVEVPELPSVPLLCSASPECCKPEHKA 220
G ++ P+P ++F S ++ + + + +P P ++SP CK E
Sbjct: 461 GVLTIAMPVPVIVNNFGMYYSLAMAKQKLPRKRKKHIPPAPQ-----ASSPTFCKTELNM 515
Query: 221 ACSSSEEDDCV 231
AC+S++ D C+
Sbjct: 516 ACNSTQSDTCL 526
>gi|24497458 Shaw-related voltage-gated potassium channel protein 2
isoform KV3.2c [Homo sapiens]
Length = 558
Score = 30.8 bits (68), Expect = 1.5
Identities = 17/71 (23%), Positives = 34/71 (47%), Gaps = 7/71 (9%)
Query: 163 GSSNVSSPLPCFGSSFHSTTSFVISD--ITEETEVEVPELPSVPLLCSASPECCKPEHKA 220
G ++ P+P ++F S ++ + + + +P P ++SP CK E
Sbjct: 461 GVLTIAMPVPVIVNNFGMYYSLAMAKQKLPRKRKKHIPPAPQ-----ASSPTFCKTELNM 515
Query: 221 ACSSSEEDDCV 231
AC+S++ D C+
Sbjct: 516 ACNSTQSDTCL 526
>gi|110347400 odz, odd Oz/ten-m homolog 1 isoform 3 [Homo sapiens]
Length = 2725
Score = 30.4 bits (67), Expect = 1.9
Identities = 22/81 (27%), Positives = 32/81 (39%), Gaps = 8/81 (9%)
Query: 157 PDFLSPGSSNVSSPLPCFGSSFHSTTSFVISDITEETEVEVPELPSVPLLCSASPEC--- 213
P FL P + S P+ C G+ + V + E +VPE + C C
Sbjct: 551 PGFLGPDCARDSCPVLCGGNGEYEKGHCVCRHGWKGPECDVPEEQCIDPTCFGHGTCIMG 610
Query: 214 ---CKPEHKAACSSSEEDDCV 231
C P +K EE+DC+
Sbjct: 611 VCICVPGYKG--EICEEEDCL 629
>gi|253970446 odz, odd Oz/ten-m homolog 1 isoform 2 [Homo sapiens]
Length = 2731
Score = 30.4 bits (67), Expect = 1.9
Identities = 22/81 (27%), Positives = 32/81 (39%), Gaps = 8/81 (9%)
Query: 157 PDFLSPGSSNVSSPLPCFGSSFHSTTSFVISDITEETEVEVPELPSVPLLCSASPEC--- 213
P FL P + S P+ C G+ + V + E +VPE + C C
Sbjct: 550 PGFLGPDCARDSCPVLCGGNGEYEKGHCVCRHGWKGPECDVPEEQCIDPTCFGHGTCIMG 609
Query: 214 ---CKPEHKAACSSSEEDDCV 231
C P +K EE+DC+
Sbjct: 610 VCICVPGYKG--EICEEEDCL 628
>gi|253970444 odz, odd Oz/ten-m homolog 1 isoform 1 [Homo sapiens]
Length = 2732
Score = 30.4 bits (67), Expect = 1.9
Identities = 22/81 (27%), Positives = 32/81 (39%), Gaps = 8/81 (9%)
Query: 157 PDFLSPGSSNVSSPLPCFGSSFHSTTSFVISDITEETEVEVPELPSVPLLCSASPEC--- 213
P FL P + S P+ C G+ + V + E +VPE + C C
Sbjct: 551 PGFLGPDCARDSCPVLCGGNGEYEKGHCVCRHGWKGPECDVPEEQCIDPTCFGHGTCIMG 610
Query: 214 ---CKPEHKAACSSSEEDDCV 231
C P +K EE+DC+
Sbjct: 611 VCICVPGYKG--EICEEEDCL 629
>gi|226371620 transcription factor 7-like 2 isoform 3 [Homo sapiens]
Length = 489
Score = 30.4 bits (67), Expect = 1.9
Identities = 36/152 (23%), Positives = 56/152 (36%), Gaps = 22/152 (14%)
Query: 62 LADIAWIAADEEETYARVRSDTRPLRHTWKPSPLIVMQRNASVPNLRGSEER-------- 113
LAD+ +E ET SD+ R +P P R+ S +L + +R
Sbjct: 41 LADVKSSLVNESETNQNSSSDSEAER---RPPPRSESFRDKSRESLEEAAKRQDGGLFKG 97
Query: 114 ----------LLALKKPALPALSRTTELQDELSHLRSQIAKIVAADAASASLTPDFLSPG 163
+ L P LP S + + L ++ + + A S D SP
Sbjct: 98 PPYPGYPFIMIPDLTSPYLPNGSLSPTARTYLQ-MKWPLLDVQAGSLQSRQALKDARSPS 156
Query: 164 SSNVSSPLPCFGSSFHSTTSFVISDITEETEV 195
+++ SPLPC + SD T T+V
Sbjct: 157 PAHIVSPLPCCTQGHDCQHFYPPSDFTVSTQV 188
>gi|169790958 methionine synthase reductase isoform 1 [Homo sapiens]
Length = 698
Score = 30.4 bits (67), Expect = 1.9
Identities = 35/132 (26%), Positives = 59/132 (44%), Gaps = 11/132 (8%)
Query: 108 RGSEERLLALKKPALPALSRTTELQDELSHLRSQIAKIVAADAA---SASLTPDFLSPGS 164
RG EE AL A PA SRT ++ EL H+ SQ+ + D+ S L + ++
Sbjct: 158 RGQEEISGALPV-ASPASSRTDLVKSELLHIESQVELLRFDDSGRKDSEVLKQNAVNSNQ 216
Query: 165 SNVSSPLPCFGSSFHSTTSFVISDITEETEVEVPELPSVPLLCSASPECCKPEHKAACSS 224
SNV F S+ + + ++ + + +P LP L + E + + +S
Sbjct: 217 SNVVI------EDFESSLTRSVPPLS-QASLNIPGLPPEYLQVHLQESLGQEESQVSVTS 269
Query: 225 SEEDDCVSLSKA 236
++ V +SKA
Sbjct: 270 ADPVFQVPISKA 281
>gi|169790956 methionine synthase reductase isoform 2 [Homo sapiens]
Length = 725
Score = 30.4 bits (67), Expect = 1.9
Identities = 35/132 (26%), Positives = 59/132 (44%), Gaps = 11/132 (8%)
Query: 108 RGSEERLLALKKPALPALSRTTELQDELSHLRSQIAKIVAADAA---SASLTPDFLSPGS 164
RG EE AL A PA SRT ++ EL H+ SQ+ + D+ S L + ++
Sbjct: 185 RGQEEISGALPV-ASPASSRTDLVKSELLHIESQVELLRFDDSGRKDSEVLKQNAVNSNQ 243
Query: 165 SNVSSPLPCFGSSFHSTTSFVISDITEETEVEVPELPSVPLLCSASPECCKPEHKAACSS 224
SNV F S+ + + ++ + + +P LP L + E + + +S
Sbjct: 244 SNVVI------EDFESSLTRSVPPLS-QASLNIPGLPPEYLQVHLQESLGQEESQVSVTS 296
Query: 225 SEEDDCVSLSKA 236
++ V +SKA
Sbjct: 297 ADPVFQVPISKA 308
>gi|4507869 vasodilator-stimulated phosphoprotein [Homo sapiens]
Length = 380
Score = 30.4 bits (67), Expect = 1.9
Identities = 17/76 (22%), Positives = 37/76 (48%), Gaps = 7/76 (9%)
Query: 69 AADEEETYARVRSDTRPLRHTWKPSPLIVMQRNASVPNLRGSEERLLALKKPALPALSRT 128
+A++EE ARV + + +R W+ + + ++P ++ S + +P P+ S
Sbjct: 289 SANQEEPEARVPAQSESVRRPWE-------KNSTTLPRMKSSSSVTTSETQPCTPSSSDY 341
Query: 129 TELQDELSHLRSQIAK 144
++LQ L ++ K
Sbjct: 342 SDLQRVKQELLEEVKK 357
>gi|115298663 SCL/TAL1 interrupting locus isoform 1 [Homo sapiens]
Length = 1288
Score = 30.4 bits (67), Expect = 1.9
Identities = 19/67 (28%), Positives = 28/67 (41%)
Query: 210 SPECCKPEHKAACSSSEEDDCVSLSKASSFADMMGILKDFHRMKQSQDLNRSLLKEEDPA 269
SP P H C+ C+ K S MMG+ D +R QD LL+ +
Sbjct: 683 SPVARPPSHMDLCNPQPCTVCMHTPKTESDNGMMGLSPDAYRFLTEQDRQLRLLQAQIQR 742
Query: 270 VLISEVL 276
+L ++ L
Sbjct: 743 LLEAQSL 749
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.315 0.129 0.373
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,763,866
Number of Sequences: 37866
Number of extensions: 539201
Number of successful extensions: 2135
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 41
Number of HSP's that attempted gapping in prelim test: 2090
Number of HSP's gapped (non-prelim): 77
length of query: 292
length of database: 18,247,518
effective HSP length: 101
effective length of query: 191
effective length of database: 14,423,052
effective search space: 2754802932
effective search space used: 2754802932
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.