Guide to the Human Genome
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Search of human proteins with 153218631

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|153218631 breast carcinoma amplified sequence 3 isoform 1
[Homo sapiens]
         (928 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|153218631 breast carcinoma amplified sequence 3 isoform 1 [Ho...  1897   0.0  
gi|153218595 breast carcinoma amplified sequence 3 isoform 2 [Ho...  1853   0.0  
gi|122939167 WDR45-like [Homo sapiens]                                 42   0.003
gi|71483646 WD repeat domain 45 isoform 2 [Homo sapiens]               38   0.038
gi|47059042 WD repeat domain 45 isoform 1 [Homo sapiens]               38   0.038
gi|75677340 WD repeat domain, phosphoinositide interacting 2 iso...    37   0.065
gi|75677331 WD repeat domain, phosphoinositide interacting 2 iso...    37   0.065
gi|75677329 WD repeat domain, phosphoinositide interacting 2 iso...    37   0.065
gi|54111428 WD repeat domain, phosphoinositide interacting 2 iso...    37   0.065
gi|7661580 WD repeat domain, phosphoinositide interacting 2 isof...    37   0.065
gi|157388939 WD repeat domain, phosphoinositide interacting 1 [H...    34   0.55 
gi|194328693 storkhead box 1 isoform d [Homo sapiens]                  34   0.72 
gi|194328691 storkhead box 1 isoform a [Homo sapiens]                  34   0.72 
gi|63025200 storkhead box 1 isoform a [Homo sapiens]                   34   0.72 
gi|239747975 PREDICTED: hypothetical protein XP_002346485 [Homo ...    33   0.94 
gi|239741872 PREDICTED: hypothetical protein XP_002342329 [Homo ...    33   0.94 
gi|148529011 coronin, actin binding protein, 2B [Homo sapiens]         33   1.2  
gi|153791893 zinc finger, BED-type containing 4 [Homo sapiens]         33   1.6  
gi|46094076 tsukushin [Homo sapiens]                                   33   1.6  
gi|83367077 mucin 16 [Homo sapiens]                                    32   2.1  
gi|20986497 mitogen-activated protein kinase 7 isoform 1 [Homo s...    32   2.1  
gi|209529736 mitogen-activated protein kinase 7 isoform 1 [Homo ...    32   2.1  
gi|209529734 mitogen-activated protein kinase 7 isoform 1 [Homo ...    32   2.1  
gi|20986499 mitogen-activated protein kinase 7 isoform 2 [Homo s...    32   2.1  
gi|148612838 hypothetical protein LOC158358 [Homo sapiens]             32   2.1  
gi|54792088 hypothetical protein LOC23506 [Homo sapiens]               32   2.1  
gi|46370073 GRB2-associated binding protein 1 isoform b [Homo sa...    32   2.7  
gi|46370071 GRB2-associated binding protein 1 isoform a [Homo sa...    32   2.7  
gi|24430146 nucleoporin 153kDa [Homo sapiens]                          31   4.7  
gi|150378503 leiomodin 2 (cardiac) [Homo sapiens]                      31   4.7  

>gi|153218631 breast carcinoma amplified sequence 3 isoform 1 [Homo
           sapiens]
          Length = 928

 Score = 1897 bits (4914), Expect = 0.0
 Identities = 928/928 (100%), Positives = 928/928 (100%)

Query: 1   MNEAMATDSPRRPSRCTGGVVVRPQAVTEQSYMESVVTFLQDVVPQAYSGTPLTEEKEKI 60
           MNEAMATDSPRRPSRCTGGVVVRPQAVTEQSYMESVVTFLQDVVPQAYSGTPLTEEKEKI
Sbjct: 1   MNEAMATDSPRRPSRCTGGVVVRPQAVTEQSYMESVVTFLQDVVPQAYSGTPLTEEKEKI 60

Query: 61  VWVRFENADLNDTSRNLEFHEIHSTGNEPPLLIMIGYSDGMQVWSIPISGEAQELFSVRH 120
           VWVRFENADLNDTSRNLEFHEIHSTGNEPPLLIMIGYSDGMQVWSIPISGEAQELFSVRH
Sbjct: 61  VWVRFENADLNDTSRNLEFHEIHSTGNEPPLLIMIGYSDGMQVWSIPISGEAQELFSVRH 120

Query: 121 GPIRAARILPAPQFGAQKCDNFAEKRPLLGVCKSIGSSGTSPPYCCVDLYSLRTGEMVKS 180
           GPIRAARILPAPQFGAQKCDNFAEKRPLLGVCKSIGSSGTSPPYCCVDLYSLRTGEMVKS
Sbjct: 121 GPIRAARILPAPQFGAQKCDNFAEKRPLLGVCKSIGSSGTSPPYCCVDLYSLRTGEMVKS 180

Query: 181 IQFKTPIYDLHCNKRILVVVLQEKIAAFDSCTFTKKFFVTSCYPCPGPNMNPIALGSRWL 240
           IQFKTPIYDLHCNKRILVVVLQEKIAAFDSCTFTKKFFVTSCYPCPGPNMNPIALGSRWL
Sbjct: 181 IQFKTPIYDLHCNKRILVVVLQEKIAAFDSCTFTKKFFVTSCYPCPGPNMNPIALGSRWL 240

Query: 241 AYAENKLIRCHQSRGGACGDNIQSYTATVISAAKTLKSGLTMVGKVVTQLTGTLPSGVTE 300
           AYAENKLIRCHQSRGGACGDNIQSYTATVISAAKTLKSGLTMVGKVVTQLTGTLPSGVTE
Sbjct: 241 AYAENKLIRCHQSRGGACGDNIQSYTATVISAAKTLKSGLTMVGKVVTQLTGTLPSGVTE 300

Query: 301 DDVAIHSNSRRSPLVPGIITVIDTETVGEGQVLVSEDSDSDGIVAHFPAHEKPVCCMAFN 360
           DDVAIHSNSRRSPLVPGIITVIDTETVGEGQVLVSEDSDSDGIVAHFPAHEKPVCCMAFN
Sbjct: 301 DDVAIHSNSRRSPLVPGIITVIDTETVGEGQVLVSEDSDSDGIVAHFPAHEKPVCCMAFN 360

Query: 361 TSGMLLVTTDTLGHDFHVFQILTHPWSSSQCAVHHLYTLHRGETEAKVQDICFSHDCRWV 420
           TSGMLLVTTDTLGHDFHVFQILTHPWSSSQCAVHHLYTLHRGETEAKVQDICFSHDCRWV
Sbjct: 361 TSGMLLVTTDTLGHDFHVFQILTHPWSSSQCAVHHLYTLHRGETEAKVQDICFSHDCRWV 420

Query: 421 VVSTLRGTSHVFPINPYGGQPCVRTHMSPRVVNRMSRFQKSAGLEEIEQELTSKQGGRCS 480
           VVSTLRGTSHVFPINPYGGQPCVRTHMSPRVVNRMSRFQKSAGLEEIEQELTSKQGGRCS
Sbjct: 421 VVSTLRGTSHVFPINPYGGQPCVRTHMSPRVVNRMSRFQKSAGLEEIEQELTSKQGGRCS 480

Query: 481 PVPGLSSSPSGSPLHGKLNSQDSYNNFTNNNPGNPRLSPLPSLMVVMPLAQIKQPMTLGT 540
           PVPGLSSSPSGSPLHGKLNSQDSYNNFTNNNPGNPRLSPLPSLMVVMPLAQIKQPMTLGT
Sbjct: 481 PVPGLSSSPSGSPLHGKLNSQDSYNNFTNNNPGNPRLSPLPSLMVVMPLAQIKQPMTLGT 540

Query: 541 ITKRTGPYLFGAGCFSIKAPCKVKPPPQISPSKSMGGEFCVAAIFGTSRSWFANNAGLKR 600
           ITKRTGPYLFGAGCFSIKAPCKVKPPPQISPSKSMGGEFCVAAIFGTSRSWFANNAGLKR
Sbjct: 541 ITKRTGPYLFGAGCFSIKAPCKVKPPPQISPSKSMGGEFCVAAIFGTSRSWFANNAGLKR 600

Query: 601 EKDQSKQVVVESLYIISCYGTLVEHMMEPRPLSTAPKISDDTPLEMMTSPRASWTLVRTP 660
           EKDQSKQVVVESLYIISCYGTLVEHMMEPRPLSTAPKISDDTPLEMMTSPRASWTLVRTP
Sbjct: 601 EKDQSKQVVVESLYIISCYGTLVEHMMEPRPLSTAPKISDDTPLEMMTSPRASWTLVRTP 660

Query: 661 QWNELQPPFNANHPLLLAADAVQYYQFLLAGLVPPGSPGPITRHGSYDSLASDHSGQEDE 720
           QWNELQPPFNANHPLLLAADAVQYYQFLLAGLVPPGSPGPITRHGSYDSLASDHSGQEDE
Sbjct: 661 QWNELQPPFNANHPLLLAADAVQYYQFLLAGLVPPGSPGPITRHGSYDSLASDHSGQEDE 720

Query: 721 EWLSQVEIVTHTGPHRRLWMGPQFQFKTIHPSGQTTVISSSSSVLQSHGPSDTPQPLLDF 780
           EWLSQVEIVTHTGPHRRLWMGPQFQFKTIHPSGQTTVISSSSSVLQSHGPSDTPQPLLDF
Sbjct: 721 EWLSQVEIVTHTGPHRRLWMGPQFQFKTIHPSGQTTVISSSSSVLQSHGPSDTPQPLLDF 780

Query: 781 DTDDLDLNSLRIQPVRSDPVSMPGSSRPVSDRRGVSTVIDAASGTFDRSVTLLEVCGSWP 840
           DTDDLDLNSLRIQPVRSDPVSMPGSSRPVSDRRGVSTVIDAASGTFDRSVTLLEVCGSWP
Sbjct: 781 DTDDLDLNSLRIQPVRSDPVSMPGSSRPVSDRRGVSTVIDAASGTFDRSVTLLEVCGSWP 840

Query: 841 EGFGLRHMSSMEHTEEGLRERLADAMAESPSRDVVGSGTELQREGSIETLSNSSGSTSGS 900
           EGFGLRHMSSMEHTEEGLRERLADAMAESPSRDVVGSGTELQREGSIETLSNSSGSTSGS
Sbjct: 841 EGFGLRHMSSMEHTEEGLRERLADAMAESPSRDVVGSGTELQREGSIETLSNSSGSTSGS 900

Query: 901 IPRNFDGYRSPLPTNESQPLSLFPTGFP 928
           IPRNFDGYRSPLPTNESQPLSLFPTGFP
Sbjct: 901 IPRNFDGYRSPLPTNESQPLSLFPTGFP 928


>gi|153218595 breast carcinoma amplified sequence 3 isoform 2 [Homo
           sapiens]
          Length = 913

 Score = 1853 bits (4800), Expect = 0.0
 Identities = 913/928 (98%), Positives = 913/928 (98%), Gaps = 15/928 (1%)

Query: 1   MNEAMATDSPRRPSRCTGGVVVRPQAVTEQSYMESVVTFLQDVVPQAYSGTPLTEEKEKI 60
           MNEAMATDSPRRPSRCTGGVVVRPQAVTEQSYMESVVTFLQDVVPQAYSGTPLTEEKEKI
Sbjct: 1   MNEAMATDSPRRPSRCTGGVVVRPQAVTEQSYMESVVTFLQDVVPQAYSGTPLTEEKEKI 60

Query: 61  VWVRFENADLNDTSRNLEFHEIHSTGNEPPLLIMIGYSDGMQVWSIPISGEAQELFSVRH 120
           VWVRFENADLNDTSRNLEFHEIHSTGNEPPLLIMIGYSDGMQVWSIPISGEAQELFSVRH
Sbjct: 61  VWVRFENADLNDTSRNLEFHEIHSTGNEPPLLIMIGYSDGMQVWSIPISGEAQELFSVRH 120

Query: 121 GPIRAARILPAPQFGAQKCDNFAEKRPLLGVCKSIGSSGTSPPYCCVDLYSLRTGEMVKS 180
           GPIRAARILPAPQFGAQKCDNFAEKRPLLGVCKSIGSSGTSPPYCCVDLYSLRTGEMVKS
Sbjct: 121 GPIRAARILPAPQFGAQKCDNFAEKRPLLGVCKSIGSSGTSPPYCCVDLYSLRTGEMVKS 180

Query: 181 IQFKTPIYDLHCNKRILVVVLQEKIAAFDSCTFTKKFFVTSCYPCPGPNMNPIALGSRWL 240
           IQFKTPIYDLHCNKRILVVVLQEKIAAFDSCTFTKKFFVTSCYPCPGPNMNPIALGSRWL
Sbjct: 181 IQFKTPIYDLHCNKRILVVVLQEKIAAFDSCTFTKKFFVTSCYPCPGPNMNPIALGSRWL 240

Query: 241 AYAENKLIRCHQSRGGACGDNIQSYTATVISAAKTLKSGLTMVGKVVTQLTGTLPSGVTE 300
           AYAENKLIRCHQSRGGACGDNIQSYTATVISAAKTLKSGLTMVGKVVTQLTGTLPSGVTE
Sbjct: 241 AYAENKLIRCHQSRGGACGDNIQSYTATVISAAKTLKSGLTMVGKVVTQLTGTLPSGVTE 300

Query: 301 DDVAIHSNSRRSPLVPGIITVIDTETVGEGQVLVSEDSDSDGIVAHFPAHEKPVCCMAFN 360
           DDVAIHSNSRRSPLVPGIITVIDTETVGEGQVLVSEDSDSDGIVAHFPAHEKPVCCMAFN
Sbjct: 301 DDVAIHSNSRRSPLVPGIITVIDTETVGEGQVLVSEDSDSDGIVAHFPAHEKPVCCMAFN 360

Query: 361 TSGMLLVTTDTLGHDFHVFQILTHPWSSSQCAVHHLYTLHRGETEAKVQDICFSHDCRWV 420
           TSGMLLVTTDTLGHDFHVFQILTHPWSSSQCAVHHLYTLHRGETEAKVQDICFSHDCRWV
Sbjct: 361 TSGMLLVTTDTLGHDFHVFQILTHPWSSSQCAVHHLYTLHRGETEAKVQDICFSHDCRWV 420

Query: 421 VVSTLRGTSHVFPINPYGGQPCVRTHMSPRVVNRMSRFQKSAGLEEIEQELTSKQGGRCS 480
           VVSTLRGTSHVFPINPYGGQPCVRTHMSPRVVNRMSRFQKSAGLEEIEQELTSKQGGRCS
Sbjct: 421 VVSTLRGTSHVFPINPYGGQPCVRTHMSPRVVNRMSRFQKSAGLEEIEQELTSKQGGRCS 480

Query: 481 PVPGLSSSPSGSPLHGKLNSQDSYNNFTNNNPGNPRLSPLPSLMVVMPLAQIKQPMTLGT 540
           PVPGLSSSPSGSPLHGKLNSQDSYNNFTNNNPGNPRLSPLPSLMVVMPLAQIKQPMTLGT
Sbjct: 481 PVPGLSSSPSGSPLHGKLNSQDSYNNFTNNNPGNPRLSPLPSLMVVMPLAQIKQPMTLGT 540

Query: 541 ITKRTGPYLFGAGCFSIKAPCKVKPPPQISPSKSMGGEFCVAAIFGTSRSWFANNAGLKR 600
           ITKRTG               KVKPPPQISPSKSMGGEFCVAAIFGTSRSWFANNAGLKR
Sbjct: 541 ITKRTG---------------KVKPPPQISPSKSMGGEFCVAAIFGTSRSWFANNAGLKR 585

Query: 601 EKDQSKQVVVESLYIISCYGTLVEHMMEPRPLSTAPKISDDTPLEMMTSPRASWTLVRTP 660
           EKDQSKQVVVESLYIISCYGTLVEHMMEPRPLSTAPKISDDTPLEMMTSPRASWTLVRTP
Sbjct: 586 EKDQSKQVVVESLYIISCYGTLVEHMMEPRPLSTAPKISDDTPLEMMTSPRASWTLVRTP 645

Query: 661 QWNELQPPFNANHPLLLAADAVQYYQFLLAGLVPPGSPGPITRHGSYDSLASDHSGQEDE 720
           QWNELQPPFNANHPLLLAADAVQYYQFLLAGLVPPGSPGPITRHGSYDSLASDHSGQEDE
Sbjct: 646 QWNELQPPFNANHPLLLAADAVQYYQFLLAGLVPPGSPGPITRHGSYDSLASDHSGQEDE 705

Query: 721 EWLSQVEIVTHTGPHRRLWMGPQFQFKTIHPSGQTTVISSSSSVLQSHGPSDTPQPLLDF 780
           EWLSQVEIVTHTGPHRRLWMGPQFQFKTIHPSGQTTVISSSSSVLQSHGPSDTPQPLLDF
Sbjct: 706 EWLSQVEIVTHTGPHRRLWMGPQFQFKTIHPSGQTTVISSSSSVLQSHGPSDTPQPLLDF 765

Query: 781 DTDDLDLNSLRIQPVRSDPVSMPGSSRPVSDRRGVSTVIDAASGTFDRSVTLLEVCGSWP 840
           DTDDLDLNSLRIQPVRSDPVSMPGSSRPVSDRRGVSTVIDAASGTFDRSVTLLEVCGSWP
Sbjct: 766 DTDDLDLNSLRIQPVRSDPVSMPGSSRPVSDRRGVSTVIDAASGTFDRSVTLLEVCGSWP 825

Query: 841 EGFGLRHMSSMEHTEEGLRERLADAMAESPSRDVVGSGTELQREGSIETLSNSSGSTSGS 900
           EGFGLRHMSSMEHTEEGLRERLADAMAESPSRDVVGSGTELQREGSIETLSNSSGSTSGS
Sbjct: 826 EGFGLRHMSSMEHTEEGLRERLADAMAESPSRDVVGSGTELQREGSIETLSNSSGSTSGS 885

Query: 901 IPRNFDGYRSPLPTNESQPLSLFPTGFP 928
           IPRNFDGYRSPLPTNESQPLSLFPTGFP
Sbjct: 886 IPRNFDGYRSPLPTNESQPLSLFPTGFP 913


>gi|122939167 WDR45-like [Homo sapiens]
          Length = 344

 Score = 42.0 bits (97), Expect = 0.003
 Identities = 27/103 (26%), Positives = 43/103 (41%), Gaps = 9/103 (8%)

Query: 330 GQVLVSEDSDSDGIVAHFPAHEKPVCCMAFNTSGMLLVTTDTLGHDFHVFQILTHPWSSS 389
           G V + + + ++      PAHE  + C+A N  G  + T    G    +F   +      
Sbjct: 164 GHVQLVDLASTEKPPVDIPAHEGVLSCIALNLQGTRIATASEKGTLIRIFDTSSG----- 218

Query: 390 QCAVHHLYTLHRGETEAKVQDICFSHDCRWVVVSTLRGTSHVF 432
               H +  L RG   A +  I F+ D   + VS+  GT H+F
Sbjct: 219 ----HLIQELRRGSQAANIYCINFNQDASLICVSSDHGTVHIF 257


>gi|71483646 WD repeat domain 45 isoform 2 [Homo sapiens]
          Length = 360

 Score = 38.1 bits (87), Expect = 0.038
 Identities = 22/86 (25%), Positives = 38/86 (44%), Gaps = 9/86 (10%)

Query: 349 AHEKPVCCMAFNTSGMLLVTTDTLGHDFHVFQILTHPWSSSQCAVHHLYTLHRGETEAKV 408
           AH+  + C++ N  G ++ +    G    +F   +            L  L RG   A +
Sbjct: 190 AHQSDIACVSLNQPGTVVASASQKGTLIRLFDTQSK---------EKLVELRRGTDPATL 240

Query: 409 QDICFSHDCRWVVVSTLRGTSHVFPI 434
             I FSHD  ++  S+ +GT H+F +
Sbjct: 241 YCINFSHDSSFLCASSDKGTVHIFAL 266


>gi|47059042 WD repeat domain 45 isoform 1 [Homo sapiens]
          Length = 361

 Score = 38.1 bits (87), Expect = 0.038
 Identities = 22/86 (25%), Positives = 38/86 (44%), Gaps = 9/86 (10%)

Query: 349 AHEKPVCCMAFNTSGMLLVTTDTLGHDFHVFQILTHPWSSSQCAVHHLYTLHRGETEAKV 408
           AH+  + C++ N  G ++ +    G    +F   +            L  L RG   A +
Sbjct: 191 AHQSDIACVSLNQPGTVVASASQKGTLIRLFDTQSK---------EKLVELRRGTDPATL 241

Query: 409 QDICFSHDCRWVVVSTLRGTSHVFPI 434
             I FSHD  ++  S+ +GT H+F +
Sbjct: 242 YCINFSHDSSFLCASSDKGTVHIFAL 267


>gi|75677340 WD repeat domain, phosphoinositide interacting 2
           isoform e [Homo sapiens]
          Length = 384

 Score = 37.4 bits (85), Expect = 0.065
 Identities = 30/117 (25%), Positives = 49/117 (41%), Gaps = 13/117 (11%)

Query: 326 TVGEGQVLVSEDSDSDGIVAHFPAHEKPVCCMAFNTSGMLLVTTDTLGHDFHVFQILTHP 385
           T+GE QV  + +  +  ++   PAH+ P+  +AF+ SG  L T    G    VF I    
Sbjct: 121 TIGEVQVFDTINLRAANMI---PAHDSPLAALAFDASGTKLATASEKGTVIRVFSIPEG- 176

Query: 386 WSSSQCAVHHLYTLHRGETE-AKVQDICFSHDCRWVVVSTLRGTSHVFPINPYGGQP 441
                     L+   RG      +  + FS D  ++  S+   T H+F +     +P
Sbjct: 177 --------QKLFEFRRGVKRCVSICSLAFSMDGMFLSASSNTETVHIFKLETVKEKP 225


>gi|75677331 WD repeat domain, phosphoinositide interacting 2
           isoform d [Homo sapiens]
          Length = 425

 Score = 37.4 bits (85), Expect = 0.065
 Identities = 30/117 (25%), Positives = 49/117 (41%), Gaps = 13/117 (11%)

Query: 326 TVGEGQVLVSEDSDSDGIVAHFPAHEKPVCCMAFNTSGMLLVTTDTLGHDFHVFQILTHP 385
           T+GE QV  + +  +  ++   PAH+ P+  +AF+ SG  L T    G    VF I    
Sbjct: 162 TIGEVQVFDTINLRAANMI---PAHDSPLAALAFDASGTKLATASEKGTVIRVFSIPEG- 217

Query: 386 WSSSQCAVHHLYTLHRGETE-AKVQDICFSHDCRWVVVSTLRGTSHVFPINPYGGQP 441
                     L+   RG      +  + FS D  ++  S+   T H+F +     +P
Sbjct: 218 --------QKLFEFRRGVKRCVSICSLAFSMDGMFLSASSNTETVHIFKLETVKEKP 266


>gi|75677329 WD repeat domain, phosphoinositide interacting 2
           isoform c [Homo sapiens]
          Length = 443

 Score = 37.4 bits (85), Expect = 0.065
 Identities = 30/117 (25%), Positives = 49/117 (41%), Gaps = 13/117 (11%)

Query: 326 TVGEGQVLVSEDSDSDGIVAHFPAHEKPVCCMAFNTSGMLLVTTDTLGHDFHVFQILTHP 385
           T+GE QV  + +  +  ++   PAH+ P+  +AF+ SG  L T    G    VF I    
Sbjct: 180 TIGEVQVFDTINLRAANMI---PAHDSPLAALAFDASGTKLATASEKGTVIRVFSIPEG- 235

Query: 386 WSSSQCAVHHLYTLHRGETE-AKVQDICFSHDCRWVVVSTLRGTSHVFPINPYGGQP 441
                     L+   RG      +  + FS D  ++  S+   T H+F +     +P
Sbjct: 236 --------QKLFEFRRGVKRCVSICSLAFSMDGMFLSASSNTETVHIFKLETVKEKP 284


>gi|54111428 WD repeat domain, phosphoinositide interacting 2
           isoform b [Homo sapiens]
          Length = 436

 Score = 37.4 bits (85), Expect = 0.065
 Identities = 30/117 (25%), Positives = 49/117 (41%), Gaps = 13/117 (11%)

Query: 326 TVGEGQVLVSEDSDSDGIVAHFPAHEKPVCCMAFNTSGMLLVTTDTLGHDFHVFQILTHP 385
           T+GE QV  + +  +  ++   PAH+ P+  +AF+ SG  L T    G    VF I    
Sbjct: 162 TIGEVQVFDTINLRAANMI---PAHDSPLAALAFDASGTKLATASEKGTVIRVFSIPEG- 217

Query: 386 WSSSQCAVHHLYTLHRGETE-AKVQDICFSHDCRWVVVSTLRGTSHVFPINPYGGQP 441
                     L+   RG      +  + FS D  ++  S+   T H+F +     +P
Sbjct: 218 --------QKLFEFRRGVKRCVSICSLAFSMDGMFLSASSNTETVHIFKLETVKEKP 266


>gi|7661580 WD repeat domain, phosphoinositide interacting 2 isoform
           a [Homo sapiens]
          Length = 454

 Score = 37.4 bits (85), Expect = 0.065
 Identities = 30/117 (25%), Positives = 49/117 (41%), Gaps = 13/117 (11%)

Query: 326 TVGEGQVLVSEDSDSDGIVAHFPAHEKPVCCMAFNTSGMLLVTTDTLGHDFHVFQILTHP 385
           T+GE QV  + +  +  ++   PAH+ P+  +AF+ SG  L T    G    VF I    
Sbjct: 180 TIGEVQVFDTINLRAANMI---PAHDSPLAALAFDASGTKLATASEKGTVIRVFSIPEG- 235

Query: 386 WSSSQCAVHHLYTLHRGETE-AKVQDICFSHDCRWVVVSTLRGTSHVFPINPYGGQP 441
                     L+   RG      +  + FS D  ++  S+   T H+F +     +P
Sbjct: 236 --------QKLFEFRRGVKRCVSICSLAFSMDGMFLSASSNTETVHIFKLETVKEKP 284


>gi|157388939 WD repeat domain, phosphoinositide interacting 1 [Homo
           sapiens]
          Length = 446

 Score = 34.3 bits (77), Expect = 0.55
 Identities = 35/130 (26%), Positives = 52/130 (40%), Gaps = 21/130 (16%)

Query: 306 HSNSRRSPLVPGIITVIDTETVGEGQVLVSEDSDSDGIVAHFPAHEKPVCCMAFNTSGML 365
           HSNS  +   PG +T       GE   +V  D +S   V    AHE  +  + FN SG  
Sbjct: 152 HSNSYLA--YPGSLTS------GE---IVLYDGNSLKTVCTIAAHEGTLAAITFNASGSK 200

Query: 366 LVTTDTLGHDFHVFQILTHPWSSSQCAVHHLYTLHRG-ETEAKVQDICFSHDCRWVVVST 424
           L +    G    VF +              LY   RG +    +  + FS D +++  S+
Sbjct: 201 LASASEKGTVIRVFSVPDG---------QKLYEFRRGMKRYVTISSLVFSMDSQFLCASS 251

Query: 425 LRGTSHVFPI 434
              T H+F +
Sbjct: 252 NTETVHIFKL 261


>gi|194328693 storkhead box 1 isoform d [Homo sapiens]
          Length = 879

 Score = 33.9 bits (76), Expect = 0.72
 Identities = 23/72 (31%), Positives = 32/72 (44%), Gaps = 7/72 (9%)

Query: 484 GLSSSPSGSPLHGKLNSQDSYNNFTNNNPGNPRLSPLPSLMVVMPLAQIKQP------MT 537
           GLS+ P G   H + +   + N  +   PG+ RL   P L    P+ +IK P        
Sbjct: 307 GLSAKPQGQG-HSRRDRHKARNQGSEFQPGSIRLEKHPKLPATQPIPRIKSPNEMVGQKP 365

Query: 538 LGTITKRTGPYL 549
           LG IT   G +L
Sbjct: 366 LGEITTVLGSHL 377


>gi|194328691 storkhead box 1 isoform a [Homo sapiens]
          Length = 989

 Score = 33.9 bits (76), Expect = 0.72
 Identities = 23/72 (31%), Positives = 32/72 (44%), Gaps = 7/72 (9%)

Query: 484 GLSSSPSGSPLHGKLNSQDSYNNFTNNNPGNPRLSPLPSLMVVMPLAQIKQP------MT 537
           GLS+ P G   H + +   + N  +   PG+ RL   P L    P+ +IK P        
Sbjct: 417 GLSAKPQGQG-HSRRDRHKARNQGSEFQPGSIRLEKHPKLPATQPIPRIKSPNEMVGQKP 475

Query: 538 LGTITKRTGPYL 549
           LG IT   G +L
Sbjct: 476 LGEITTVLGSHL 487


>gi|63025200 storkhead box 1 isoform a [Homo sapiens]
          Length = 989

 Score = 33.9 bits (76), Expect = 0.72
 Identities = 23/72 (31%), Positives = 32/72 (44%), Gaps = 7/72 (9%)

Query: 484 GLSSSPSGSPLHGKLNSQDSYNNFTNNNPGNPRLSPLPSLMVVMPLAQIKQP------MT 537
           GLS+ P G   H + +   + N  +   PG+ RL   P L    P+ +IK P        
Sbjct: 417 GLSAKPQGQG-HSRRDRHKARNQGSEFQPGSIRLEKHPKLPATQPIPRIKSPNEMVGQKP 475

Query: 538 LGTITKRTGPYL 549
           LG IT   G +L
Sbjct: 476 LGEITTVLGSHL 487


>gi|239747975 PREDICTED: hypothetical protein XP_002346485 [Homo
           sapiens]
          Length = 219

 Score = 33.5 bits (75), Expect = 0.94
 Identities = 32/118 (27%), Positives = 50/118 (42%), Gaps = 12/118 (10%)

Query: 702 TRHGSYDSLASDHSGQEDEEWLSQVEIVTHTGPHRRLWMGPQFQFKTIHPSGQTTVISSS 761
           T HG+Y   +S H   E    L Q+  +      R  + G     K  HP  Q TV+S S
Sbjct: 58  THHGAYSINSSHHPSPE----LLQMRNMDCYHCSRGSFSGRARSSKHSHPQQQHTVLSQS 113

Query: 762 SSVLQSHGPSDTPQPLLDFDTDDLDLNSLRIQPVRSDPVSMPGSSR-----PVSDRRG 814
            S ++S GP    +P  +     ++  +   +P R  P +   ++R     P + RRG
Sbjct: 114 LSPMESEGPHRRRKPGAESPRRAIEAGA---RPPRQRPGAGTAAARASRAGPRASRRG 168


>gi|239741872 PREDICTED: hypothetical protein XP_002342329 [Homo
           sapiens]
          Length = 219

 Score = 33.5 bits (75), Expect = 0.94
 Identities = 32/118 (27%), Positives = 50/118 (42%), Gaps = 12/118 (10%)

Query: 702 TRHGSYDSLASDHSGQEDEEWLSQVEIVTHTGPHRRLWMGPQFQFKTIHPSGQTTVISSS 761
           T HG+Y   +S H   E    L Q+  +      R  + G     K  HP  Q TV+S S
Sbjct: 58  THHGAYSINSSHHPSPE----LLQMRNMDCYHCSRGSFSGRARSSKHSHPQQQHTVLSQS 113

Query: 762 SSVLQSHGPSDTPQPLLDFDTDDLDLNSLRIQPVRSDPVSMPGSSR-----PVSDRRG 814
            S ++S GP    +P  +     ++  +   +P R  P +   ++R     P + RRG
Sbjct: 114 LSPMESEGPHRRRKPGAESPRRAIEAGA---RPPRQRPGAGTAAARASRAGPRASRRG 168


>gi|148529011 coronin, actin binding protein, 2B [Homo sapiens]
          Length = 480

 Score = 33.1 bits (74), Expect = 1.2
 Identities = 25/79 (31%), Positives = 36/79 (45%), Gaps = 1/79 (1%)

Query: 292 GTLPSGVTEDDVAIHSNSRRSPLVPGIITVIDTE-TVGEGQVLVSEDSDSDGIVAHFPAH 350
           G L   +TE  + +H +SRR  LV    T  +   + G    ++  + D    V     H
Sbjct: 120 GGLKRNMTEALLELHGHSRRVGLVEWHPTTNNILFSAGYDYKVLIWNLDVGEPVKMIDCH 179

Query: 351 EKPVCCMAFNTSGMLLVTT 369
              + CM+FNT G LL TT
Sbjct: 180 TDVILCMSFNTDGSLLTTT 198


>gi|153791893 zinc finger, BED-type containing 4 [Homo sapiens]
          Length = 1171

 Score = 32.7 bits (73), Expect = 1.6
 Identities = 22/79 (27%), Positives = 38/79 (48%), Gaps = 5/79 (6%)

Query: 398 TLHRGETEAKVQDICFSHDCRWVVVSTLRGTSHVFPINPYGGQPCVRTHMSPRVVNRMSR 457
           TL+ GE  + VQ  CFSH    +V   ++    V  +     + C R H SP+   +++ 
Sbjct: 816 TLNEGE-HSSVQ--CFSHTVNLIVSEAIKSQRMVQNLLSLARKICERVHRSPKAKEKLAE 872

Query: 458 FQKSAGLEE--IEQELTSK 474
            Q+   L +  + Q++ SK
Sbjct: 873 LQREYALPQHHLIQDVPSK 891


>gi|46094076 tsukushin [Homo sapiens]
          Length = 353

 Score = 32.7 bits (73), Expect = 1.6
 Identities = 32/126 (25%), Positives = 52/126 (41%), Gaps = 18/126 (14%)

Query: 769 GPSDTPQPLLDFDTDDLDLNSLRIQPVRSDPVSMPGSSRPVSDRRGVSTVIDAASGTFDR 828
           GP   P P+   DT  LDL+S R++ V    ++ PG +         + +   +   F R
Sbjct: 48  GPHIMPVPI-PLDTAHLDLSSNRLEMVNESVLAGPGYTTLAGLDLSHNLLTSISPTAFSR 106

Query: 829 SVTLLEVCGSWPEGFGLRHMSSMEHTEEGLRERLADAMAESPSRDVVGSGTELQREGSIE 888
                           LR++ S++ +  GL    A++   SP  DV  S  +L RE S+ 
Sbjct: 107 ----------------LRYLESLDLSHNGLTALPAESFTSSPLSDVNLSHNQL-REVSVS 149

Query: 889 TLSNSS 894
             +  S
Sbjct: 150 AFTTHS 155


>gi|83367077 mucin 16 [Homo sapiens]
          Length = 14507

 Score = 32.3 bits (72), Expect = 2.1
 Identities = 36/135 (26%), Positives = 53/135 (39%), Gaps = 10/135 (7%)

Query: 706  SYDSLASDHSGQEDEEWLSQVEIVTHTGPHRRLWMGPQFQFKT-----IHPSGQTTVISS 760
            S  SL   HS        SQ+  +   GP    WM P    KT     +  S  TT  S 
Sbjct: 7926 STTSLTMTHSTISQGFSHSQMSTLMRRGPEDVSWMSPPLLEKTRPSFSLMSSPATTSPSP 7985

Query: 761  SSSVLQSHGPSDTPQPLLDFDTDDL----DLNSLRIQPVRSDPVSMPGSSRPVSDRRGVS 816
             SS L     S +P P+    T  L    D+     +PV + P ++  +S  +     V+
Sbjct: 7986 VSSTL-PESISSSPLPVTSLLTSGLAKTTDMLHKSSEPVTNSPANLSSTSVEILATSEVT 8044

Query: 817  TVIDAASGTFDRSVT 831
            T  +    + +R+VT
Sbjct: 8045 TDTEKTHPSSNRTVT 8059


>gi|20986497 mitogen-activated protein kinase 7 isoform 1 [Homo
           sapiens]
          Length = 816

 Score = 32.3 bits (72), Expect = 2.1
 Identities = 36/129 (27%), Positives = 51/129 (39%), Gaps = 12/129 (9%)

Query: 450 RVVNRMSRFQKSAGLEEIEQELTSKQGGRCSPVPGLSSSPSGSPLHGKL---NSQDSYNN 506
           R   R  R +++   E+  QE   K+ G      G S  PS  PL G +   N +     
Sbjct: 517 REEKRRRRQERAKEREKRRQERERKERGA-----GASGGPSTDPLAGLVLSDNDRSLLER 571

Query: 507 FTNN-NPGNPRLSPLPS-LMVVMPLAQIKQPMTL--GTITKRTGPYLFGAGCFSIKAPCK 562
           +T    P  P L+ +P+      P     QP +   G + + TGP    AG  S   P  
Sbjct: 572 WTRMARPAAPALTSVPAPAPAPTPTPTPVQPTSPPPGPVAQPTGPQPQSAGSTSGPVPQP 631

Query: 563 VKPPPQISP 571
             PPP  +P
Sbjct: 632 ACPPPGPAP 640


>gi|209529736 mitogen-activated protein kinase 7 isoform 1 [Homo
           sapiens]
          Length = 816

 Score = 32.3 bits (72), Expect = 2.1
 Identities = 36/129 (27%), Positives = 51/129 (39%), Gaps = 12/129 (9%)

Query: 450 RVVNRMSRFQKSAGLEEIEQELTSKQGGRCSPVPGLSSSPSGSPLHGKL---NSQDSYNN 506
           R   R  R +++   E+  QE   K+ G      G S  PS  PL G +   N +     
Sbjct: 517 REEKRRRRQERAKEREKRRQERERKERGA-----GASGGPSTDPLAGLVLSDNDRSLLER 571

Query: 507 FTNN-NPGNPRLSPLPS-LMVVMPLAQIKQPMTL--GTITKRTGPYLFGAGCFSIKAPCK 562
           +T    P  P L+ +P+      P     QP +   G + + TGP    AG  S   P  
Sbjct: 572 WTRMARPAAPALTSVPAPAPAPTPTPTPVQPTSPPPGPVAQPTGPQPQSAGSTSGPVPQP 631

Query: 563 VKPPPQISP 571
             PPP  +P
Sbjct: 632 ACPPPGPAP 640


>gi|209529734 mitogen-activated protein kinase 7 isoform 1 [Homo
           sapiens]
          Length = 816

 Score = 32.3 bits (72), Expect = 2.1
 Identities = 36/129 (27%), Positives = 51/129 (39%), Gaps = 12/129 (9%)

Query: 450 RVVNRMSRFQKSAGLEEIEQELTSKQGGRCSPVPGLSSSPSGSPLHGKL---NSQDSYNN 506
           R   R  R +++   E+  QE   K+ G      G S  PS  PL G +   N +     
Sbjct: 517 REEKRRRRQERAKEREKRRQERERKERGA-----GASGGPSTDPLAGLVLSDNDRSLLER 571

Query: 507 FTNN-NPGNPRLSPLPS-LMVVMPLAQIKQPMTL--GTITKRTGPYLFGAGCFSIKAPCK 562
           +T    P  P L+ +P+      P     QP +   G + + TGP    AG  S   P  
Sbjct: 572 WTRMARPAAPALTSVPAPAPAPTPTPTPVQPTSPPPGPVAQPTGPQPQSAGSTSGPVPQP 631

Query: 563 VKPPPQISP 571
             PPP  +P
Sbjct: 632 ACPPPGPAP 640


>gi|20986499 mitogen-activated protein kinase 7 isoform 2 [Homo
           sapiens]
          Length = 677

 Score = 32.3 bits (72), Expect = 2.1
 Identities = 36/129 (27%), Positives = 51/129 (39%), Gaps = 12/129 (9%)

Query: 450 RVVNRMSRFQKSAGLEEIEQELTSKQGGRCSPVPGLSSSPSGSPLHGKL---NSQDSYNN 506
           R   R  R +++   E+  QE   K+ G      G S  PS  PL G +   N +     
Sbjct: 378 REEKRRRRQERAKEREKRRQERERKERGA-----GASGGPSTDPLAGLVLSDNDRSLLER 432

Query: 507 FTNN-NPGNPRLSPLPS-LMVVMPLAQIKQPMTL--GTITKRTGPYLFGAGCFSIKAPCK 562
           +T    P  P L+ +P+      P     QP +   G + + TGP    AG  S   P  
Sbjct: 433 WTRMARPAAPALTSVPAPAPAPTPTPTPVQPTSPPPGPVAQPTGPQPQSAGSTSGPVPQP 492

Query: 563 VKPPPQISP 571
             PPP  +P
Sbjct: 493 ACPPPGPAP 501


>gi|148612838 hypothetical protein LOC158358 [Homo sapiens]
          Length = 2103

 Score = 32.3 bits (72), Expect = 2.1
 Identities = 49/210 (23%), Positives = 81/210 (38%), Gaps = 20/210 (9%)

Query: 284  GKVVTQLTGTLPSGVTEDDVAIHSNSRRSPLVPGIITVIDTETVGEGQVLVSEDSDSDGI 343
            G V TQL  T     T   ++  S++R  PL P  +T +        +   SE   +   
Sbjct: 1158 GTVSTQLPNTA-FNKTITPLSNISSARPQPLSP--VTSVSNLLTPSVKTSQSEAGKAKNA 1214

Query: 344  VAHFPAHEKPVCCMAFNTSGMLLVTTDTLGHDFHVFQILTHPWSSSQCAVHHLYTLHRGE 403
            V+       P      +++G  L +T TL          T+P SS  C      T    E
Sbjct: 1215 VSA-ATFSLPSASPTISSTGQPLSSTTTLNGS-------TNPGSSFNCFAQQ--TADSSE 1264

Query: 404  TEAKVQDICFSHDCRWVVVSTLRGTSHVFPINPYGGQPCVRTHMSPRVVNRMSRFQKSAG 463
             + +++ +C   D + ++V T  G + V  +     Q       SP  V+  S F  +  
Sbjct: 1265 AKQELKTVCI-RDSQSILVRTRGGNTGVVKVQTNPDQN------SPNTVSSSSVFTFAPQ 1317

Query: 464  LEEIEQELTSKQGGRCSPVPGLSSSPSGSP 493
            L+      ++      SPV G +++ S SP
Sbjct: 1318 LQAFLVPKSTTSSSAFSPVAGTTTTSSLSP 1347


>gi|54792088 hypothetical protein LOC23506 [Homo sapiens]
          Length = 1079

 Score = 32.3 bits (72), Expect = 2.1
 Identities = 52/239 (21%), Positives = 88/239 (36%), Gaps = 48/239 (20%)

Query: 352 KPVCCMAFNTSGMLLVTTDTLGHDFHVFQ---ILTHPWSSSQCAVHHLYTLHRGETEAKV 408
           KPV   A +++G  +V    +G   H  Q   ++    S S  +VHH+ T++    + + 
Sbjct: 371 KPVTSQAVSSTGGSIVIHSPMGQP-HAPQSQFLIPTSLSVSSNSVHHVQTINGQLLQTQP 429

Query: 409 QDICFSHDCRWVVVSTLRGTSHVFPINPY----------------------GGQPCVRTH 446
             +         V+     ++ +    PY                       G P +  H
Sbjct: 430 SQLISGQVASEHVMLNRNSSNMLRTNQPYTGPMLNNQNTAVHLVSGQTFAASGSPVIANH 489

Query: 447 MSPRVVNRMSRFQK--------SAGLEEIEQ---------ELTSKQGGRCSPVPGLSSSP 489
            SP++V      Q+        S G   + Q          +TS  G   S  P +SS+ 
Sbjct: 490 ASPQLVGGQMPLQQASPTVLHLSPGQSSVSQGRPGFATMPSVTSMSGP--SRFPAVSSAS 547

Query: 490 SGSPLHGK-LNSQDSYNNFTNNNPGNPRLSPLP-SLMVVMPLAQIKQPMTLGTITKRTG 546
           +  P  G  + S  S +NFT +    P  +P+P S+   +P++  K   T    T  TG
Sbjct: 548 TAHPSLGSAVQSGSSGSNFTGDQLTQPNRTPVPVSVSHRLPVSSSKSTSTFSN-TPGTG 605


>gi|46370073 GRB2-associated binding protein 1 isoform b [Homo
           sapiens]
          Length = 694

 Score = 32.0 bits (71), Expect = 2.7
 Identities = 42/183 (22%), Positives = 68/183 (37%), Gaps = 42/183 (22%)

Query: 660 PQWNELQPPFNANHPLLLAADAVQYYQFLLAGLVPPGSPGPITRHGSYDSLASDHSGQED 719
           P+W ELQ P  +      A D+ ++          P SP P + H +  S  SD      
Sbjct: 540 PEWEELQAPVRSPITRSFARDSSRF----------PMSPRPDSVHSTTSS--SD------ 581

Query: 720 EEWLSQVEIVTHTGPHRRLWMGPQFQFKTIHPSGQTTVISSSSSVLQSHGPSDTPQPLLD 779
                     +H      + M P    +  +  G  ++   SS +++  G          
Sbjct: 582 ----------SHDSEENYVPMNPNLSSEDPNLFGSNSLDGGSSPMIKPKGDKQV------ 625

Query: 780 FDTDDLDLNSLRIQPVRSDPVSMPGSSRPVSDRRGVSTVIDAASGTFDRSVTLLEVCGSW 839
            +  DLDL+S +  P R    S  GSS  V+D R    V+D       +++ L     +W
Sbjct: 626 -EYLDLDLDSGKSTPPRKQKSSGSGSS--VADERVDYVVVDQ-----QKTLALKSTREAW 677

Query: 840 PEG 842
            +G
Sbjct: 678 TDG 680


>gi|46370071 GRB2-associated binding protein 1 isoform a [Homo
           sapiens]
          Length = 724

 Score = 32.0 bits (71), Expect = 2.7
 Identities = 42/183 (22%), Positives = 68/183 (37%), Gaps = 42/183 (22%)

Query: 660 PQWNELQPPFNANHPLLLAADAVQYYQFLLAGLVPPGSPGPITRHGSYDSLASDHSGQED 719
           P+W ELQ P  +      A D+ ++          P SP P + H +  S  SD      
Sbjct: 570 PEWEELQAPVRSPITRSFARDSSRF----------PMSPRPDSVHSTTSS--SD------ 611

Query: 720 EEWLSQVEIVTHTGPHRRLWMGPQFQFKTIHPSGQTTVISSSSSVLQSHGPSDTPQPLLD 779
                     +H      + M P    +  +  G  ++   SS +++  G          
Sbjct: 612 ----------SHDSEENYVPMNPNLSSEDPNLFGSNSLDGGSSPMIKPKGDKQV------ 655

Query: 780 FDTDDLDLNSLRIQPVRSDPVSMPGSSRPVSDRRGVSTVIDAASGTFDRSVTLLEVCGSW 839
            +  DLDL+S +  P R    S  GSS  V+D R    V+D       +++ L     +W
Sbjct: 656 -EYLDLDLDSGKSTPPRKQKSSGSGSS--VADERVDYVVVDQ-----QKTLALKSTREAW 707

Query: 840 PEG 842
            +G
Sbjct: 708 TDG 710


>gi|24430146 nucleoporin 153kDa [Homo sapiens]
          Length = 1475

 Score = 31.2 bits (69), Expect = 4.7
 Identities = 17/65 (26%), Positives = 27/65 (41%)

Query: 487  SSPSGSPLHGKLNSQDSYNNFTNNNPGNPRLSPLPSLMVVMPLAQIKQPMTLGTITKRTG 546
            S+PS SP  G   +     +   + P  P    + S   + P      P T GT++  + 
Sbjct: 1311 SAPSASPAFGANQTPTFGQSQGASQPNPPGFGSISSSTALFPTGSQPAPPTFGTVSSSSQ 1370

Query: 547  PYLFG 551
            P +FG
Sbjct: 1371 PPVFG 1375


>gi|150378503 leiomodin 2 (cardiac) [Homo sapiens]
          Length = 547

 Score = 31.2 bits (69), Expect = 4.7
 Identities = 26/86 (30%), Positives = 44/86 (51%), Gaps = 17/86 (19%)

Query: 706 SYDSLASDHSGQEDEEWLSQVEIVTHT-GPHRRLWMGPQFQFKTIHPSGQTTVISSSSSV 764
           +YDS+ SD+S  + + + SQ+E +  T G + R    P      IHP G  TVI  +   
Sbjct: 152 NYDSVNSDNS--KPKIFKSQIENINLTNGSNGRNTESPA----AIHPCGNPTVIEDALDK 205

Query: 765 LQSHGPSDTPQPLLDFDTDDLDLNSL 790
           ++S+ P          DT +++LN++
Sbjct: 206 IKSNDP----------DTTEVNLNNI 221


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.317    0.133    0.405 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 40,775,211
Number of Sequences: 37866
Number of extensions: 2083351
Number of successful extensions: 5555
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 34
Number of HSP's that attempted gapping in prelim test: 5519
Number of HSP's gapped (non-prelim): 79
length of query: 928
length of database: 18,247,518
effective HSP length: 112
effective length of query: 816
effective length of database: 14,006,526
effective search space: 11429325216
effective search space used: 11429325216
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 67 (30.4 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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