Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: STOX1 Sequence: fasta or formatted (989aa) NCBI GI: 63025200
Description:

storkhead box 1 isoform a

Referenced in:

Ovary, Uterus and Placenta

Other entries for this name:
alt prot [227aa] storkhead box 1 isoform b
alt prot [169aa] storkhead box 1 isoform c
alt mRNA [989aa] storkhead box 1 isoform a
alt prot [879aa] storkhead box 1 isoform d
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.3         62           2
 C cysteine            1.7         17           2
 D aspartate           4.9         48           3
 E glutamate           7.5         74           3
 F phenylalanine       3.4         34           1
 G glycine             6.3         62           2
 H histidine           3.1         31           2
 I isoleucine          4.2         42           2
 K lysine              6.1         60           2
 L leucine             8.1         80           2
 M methionine          2.1         21           1
 N asparagine          4.2         42           2
 P proline             6.6         65           2
 Q glutamine           6.6         65           2
 R arginine            6.5         64           3
 S serine              9.1         90           2
 T threonine           5.1         50           3
 V valine              5.1         50           2
 W tryptophan          0.7          7           1
 Y tyrosine            2.5         25           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   storkhead box 1 isoform a 
STOX1                 1.000   storkhead box 1 isoform a 
STOX1                 0.890   storkhead box 1 isoform d 
STOX1                 0.211   storkhead box 1 isoform b 
STOX1                 0.145   storkhead box 1 isoform c 
STOX2                 0.117   storkhead box 2 
MLL3                  0.005   myeloid/lymphoid or mixed-lineage leukemia 3 
BCAS3                 0.005   breast carcinoma amplified sequence 3 isoform 1 [Ho...
MAGED2                0.005   melanoma antigen family D, 2 
MAGED2                0.005   melanoma antigen family D, 2 
MAGED2                0.005   melanoma antigen family D, 2 
PHACTR4               0.004   phosphatase and actin regulator 4 isoform 2 
GRAMD1A               0.004   GRAM domain containing 1A isoform 2 
PHACTR4               0.004   phosphatase and actin regulator 4 isoform 1 
EFCAB5                0.004   EF-hand calcium binding domain 5 isoform b 
EFCAB5                0.004   EF-hand calcium binding domain 5 isoform a 
ELF2                  0.004   E74-like factor 2 (ets domain transcription factor) i...
KIAA1370              0.004   hypothetical protein LOC56204 
CBX8                  0.004   chromobox homolog 8 
P2RX2                 0.004   purinergic receptor P2X2 isoform H 
P2RX2                 0.004   purinergic receptor P2X2 isoform I 
P2RX2                 0.004   purinergic receptor P2X2 isoform D 
P2RX2                 0.004   purinergic receptor P2X2 isoform A 
P2RX2                 0.004   purinergic receptor P2X2 isoform C 
BAT2D1                0.004   HBxAg transactivated protein 2 
AMN                   0.004   amnionless protein precursor 
BCAS3                 0.004   breast carcinoma amplified sequence 3 isoform 2 [Ho...
KLRAQ1                0.004   KLRAQ motif containing 1 isoform 2 
KLRAQ1                0.004   KLRAQ motif containing 1 isoform 1 
NEFH                  0.004   neurofilament, heavy polypeptide 200kDa 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press