Guide to the Human Genome
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Name: KIAA2026 Sequence: fasta or formatted (2103aa) NCBI GI: 148612838
Description:

hypothetical protein LOC158358

Not currently referenced in the text

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.2        131           4
 C cysteine            1.7         35           2
 D aspartate           2.9         61           2
 E glutamate           6.1        128           3
 F phenylalanine       2.8         59           2
 G glycine             5.4        114           3
 H histidine           2.0         42           1
 I isoleucine          5.4        113           2
 K lysine              7.6        159           9
 L leucine             9.1        191           2
 M methionine          1.4         30           2
 N asparagine          4.4         93           2
 P proline             8.3        174           3
 Q glutamine           5.4        113           3
 R arginine            3.7         77           3
 S serine             11.6        243           4
 T threonine           7.9        167           4
 V valine              6.4        134           2
 W tryptophan          0.5         10           1
 Y tyrosine            1.4         29           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   hypothetical protein LOC158358 
MUC17                 0.025   mucin 17 
MUC4                  0.023   mucin 4 isoform a 
MUC2                  0.020   mucin 2 precursor 
MUC16                 0.018   mucin 16 
LOC100131514          0.018   PREDICTED: similar to hCG1747327, partial 
MUC5B                 0.018   mucin 5, subtype B, tracheobronchial 
MUC5AC                0.017   mucin 5AC 
MUC6                  0.017   mucin 6, gastric 
MUC3A                 0.017   PREDICTED: mucin 3A, intestinal 
LOC729792             0.016   PREDICTED: hypothetical protein 
LOC729792             0.016   PREDICTED: hypothetical protein 
MUC12                 0.016   PREDICTED: mucin 12 
LOC729792             0.016   PREDICTED: hypothetical protein 
LOC100294501          0.016   PREDICTED: hypothetical protein 
LOC100294238          0.016   PREDICTED: hypothetical protein 
LOC100294204          0.016   PREDICTED: hypothetical protein 
LOC100294136          0.016   PREDICTED: hypothetical protein 
LOC100294091          0.016   PREDICTED: hypothetical protein 
LOC730401             0.016   PREDICTED: hypothetical protein 
LOC100294249          0.016   PREDICTED: hypothetical protein XP_002344067 
MUC12                 0.016   PREDICTED: mucin 12, cell surface associated 
MUC3A                 0.015   PREDICTED: mucin 3A, cell surface associated, parti...
LOC100134138          0.014   PREDICTED: similar to mucin, partial 
MUC3B                 0.013   PREDICTED: mucin 3B, cell surface associated, parti...
MUC21                 0.012   mucin 21 
LOC100294420          0.011   PREDICTED: similar to mucin 2 
LOC100294236          0.011   PREDICTED: similar to diffuse panbronchiolitis crit...
SRCAP                 0.011   Snf2-related CBP activator protein 
MUC12                 0.010   PREDICTED: mucin 12 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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