Guide to the Human Genome
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Name: WDR45L Sequence: fasta or formatted (344aa) NCBI GI: 122939167
Description:

WDR45-like

Referenced in:

WD Repeat Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.4         22           2
 C cysteine            4.1         14           1
 D aspartate           4.7         16           2
 E glutamate           5.2         18           1
 F phenylalanine       6.1         21           1
 G glycine             7.3         25           3
 H histidine           3.5         12           1
 I isoleucine          5.5         19           1
 K lysine              7.0         24           3
 L leucine             9.0         31           2
 M methionine          1.7          6           1
 N asparagine          5.8         20           2
 P proline             5.5         19           2
 Q glutamine           3.2         11           1
 R arginine            3.2         11           2
 S serine              7.0         24           2
 T threonine           4.7         16           1
 V valine              6.7         23           3
 W tryptophan          0.6          2           1
 Y tyrosine            2.9         10           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   WDR45-like 
WDR45                 0.432   WD repeat domain 45 isoform 2 
WDR45                 0.428   WD repeat domain 45 isoform 1 
WIPI2                 0.167   WD repeat domain, phosphoinositide interacting 2 iso...
WIPI2                 0.167   WD repeat domain, phosphoinositide interacting 2 iso...
WIPI2                 0.151   WD repeat domain, phosphoinositide interacting 2 iso...
WIPI2                 0.151   WD repeat domain, phosphoinositide interacting 2 isof...
WIPI1                 0.149   WD repeat domain, phosphoinositide interacting 1 [H...
WIPI2                 0.146   WD repeat domain, phosphoinositide interacting 2 iso...
WDR69                 0.035   WD repeat domain 69 
BCAS3                 0.025   breast carcinoma amplified sequence 3 isoform 1 [Ho...
BCAS3                 0.025   breast carcinoma amplified sequence 3 isoform 2 [Ho...
WDR5                  0.017   WD repeat domain 5 
WDR5                  0.017   WD repeat domain 5 
WDR5B                 0.017   WD repeat domain 5B 
GNB5                  0.017   guanine nucleotide-binding protein, beta-5 subunit is...
GNB5                  0.017   guanine nucleotide-binding protein, beta-5 subunit i...
WDR51B                0.016   WD repeat domain 51B 
WSB2                  0.014   WD SOCS-box protein 2 
SNRNP40               0.014   WD repeat domain 57 (U5 snRNP specific) 
ELP2                  0.013   elongator protein 2 
WDR35                 0.013   WD repeat domain 35 isoform 2 
WDR35                 0.013   WD repeat domain 35 isoform 1 
WDR1                  0.012   WD repeat-containing protein 1 isoform 2 
APAF1                 0.012   apoptotic peptidase activating factor 1 isoform d [H...
APAF1                 0.012   apoptotic peptidase activating factor 1 isoform c [H...
APAF1                 0.012   apoptotic peptidase activating factor 1 isoform b [Ho...
APAF1                 0.012   apoptotic peptidase activating factor 1 isoform a [Ho...
PREB                  0.012   prolactin regulatory element binding protein 
WDR1                  0.012   WD repeat-containing protein 1 isoform 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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