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Search of human proteins with 15149476
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|15149476 arginyl-tRNA synthetase [Homo sapiens]
(660 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|15149476 arginyl-tRNA synthetase [Homo sapiens] 1318 0.0
gi|197100773 arginyl-tRNA synthetase 2, mitochondrial precursor ... 205 1e-52
gi|40538799 ataxin-1 ubiquitin-like interacting protein [Homo sa... 39 0.015
gi|38570111 threonyl-tRNA synthetase-like 2 [Homo sapiens] 37 0.058
gi|16753205 ubiquilin 1 isoform 2 [Homo sapiens] 35 0.22
gi|16753203 ubiquilin 1 isoform 1 [Homo sapiens] 35 0.22
gi|156415984 tropomodulin 4 (muscle) [Homo sapiens] 34 0.38
gi|157694505 LINE-1 type transposase domain containing 1 [Homo s... 33 0.64
gi|109255234 centrosomal protein 290kDa [Homo sapiens] 33 0.84
gi|29294649 dicer1 [Homo sapiens] 33 1.1
gi|29294651 dicer1 [Homo sapiens] 33 1.1
gi|216548091 leucine zipper protein 1 [Homo sapiens] 33 1.1
gi|216548085 leucine zipper protein 1 [Homo sapiens] 33 1.1
gi|38044112 restin isoform b [Homo sapiens] 32 1.4
gi|4506751 restin isoform a [Homo sapiens] 32 1.4
gi|122937345 myosin VB [Homo sapiens] 32 2.4
gi|14670362 POZ (BTB) and AT hook containing zinc finger 1 long ... 31 3.2
gi|14670360 POZ (BTB) and AT hook containing zinc finger 1 long ... 31 3.2
gi|218505835 membrane-associated guanylate kinase-related 3 iso... 31 3.2
gi|87298937 centrosomal protein 110kDa [Homo sapiens] 31 3.2
gi|19718764 ubiquitin protein ligase E3A isoform 3 [Homo sapiens] 31 4.2
gi|19718762 ubiquitin protein ligase E3A isoform 1 [Homo sapiens] 31 4.2
gi|19718766 ubiquitin protein ligase E3A isoform 2 [Homo sapiens] 31 4.2
gi|30581135 structural maintenance of chromosomes 1A [Homo sapiens] 31 4.2
gi|14195601 protein phosphatase 1, regulatory (inhibitor) subuni... 30 5.4
gi|4505319 protein phosphatase 1, regulatory (inhibitor) subunit... 30 5.4
gi|22208850 Golgi coiled-coil protein 1 [Homo sapiens] 30 5.4
gi|148762940 DVL-binding protein DAPLE [Homo sapiens] 30 5.4
gi|205277396 dynactin 1 isoform 4 [Homo sapiens] 30 7.1
gi|205277392 dynactin 1 isoform 3 [Homo sapiens] 30 7.1
>gi|15149476 arginyl-tRNA synthetase [Homo sapiens]
Length = 660
Score = 1318 bits (3411), Expect = 0.0
Identities = 660/660 (100%), Positives = 660/660 (100%)
Query: 1 MDVLVSECSARLLQQEEEIKSLTAEIDRLKNCGCLGASPNLEQLQEENLKLKYRLNILRK 60
MDVLVSECSARLLQQEEEIKSLTAEIDRLKNCGCLGASPNLEQLQEENLKLKYRLNILRK
Sbjct: 1 MDVLVSECSARLLQQEEEIKSLTAEIDRLKNCGCLGASPNLEQLQEENLKLKYRLNILRK 60
Query: 61 SLQAERNKPTKNMINIISRLQEVFGHAIKAAYPDLENPPLLVTPSQQAKFGDYQCNSAMG 120
SLQAERNKPTKNMINIISRLQEVFGHAIKAAYPDLENPPLLVTPSQQAKFGDYQCNSAMG
Sbjct: 61 SLQAERNKPTKNMINIISRLQEVFGHAIKAAYPDLENPPLLVTPSQQAKFGDYQCNSAMG 120
Query: 121 ISQMLKTKEQKVNPREIAENITKHLPDNECIEKVEIAGPGFINVHLRKDFVSEQLTSLLV 180
ISQMLKTKEQKVNPREIAENITKHLPDNECIEKVEIAGPGFINVHLRKDFVSEQLTSLLV
Sbjct: 121 ISQMLKTKEQKVNPREIAENITKHLPDNECIEKVEIAGPGFINVHLRKDFVSEQLTSLLV 180
Query: 181 NGVQLPALGENKKVIVDFSSPNIAKEMHVGHLRSTIIGESISRLFEFAGYDVLRLNHVGD 240
NGVQLPALGENKKVIVDFSSPNIAKEMHVGHLRSTIIGESISRLFEFAGYDVLRLNHVGD
Sbjct: 181 NGVQLPALGENKKVIVDFSSPNIAKEMHVGHLRSTIIGESISRLFEFAGYDVLRLNHVGD 240
Query: 241 WGTQFGMLIAHLQDKFPDYLTVSPPIGDLQVFYKESKKRFDTEEEFKKRAYQCVVLLQGK 300
WGTQFGMLIAHLQDKFPDYLTVSPPIGDLQVFYKESKKRFDTEEEFKKRAYQCVVLLQGK
Sbjct: 241 WGTQFGMLIAHLQDKFPDYLTVSPPIGDLQVFYKESKKRFDTEEEFKKRAYQCVVLLQGK 300
Query: 301 NPDITKAWKLICDVSRQELNKIYDALDVSLIERGESFYQDRMNDIVKEFEDRGFVQVDDG 360
NPDITKAWKLICDVSRQELNKIYDALDVSLIERGESFYQDRMNDIVKEFEDRGFVQVDDG
Sbjct: 301 NPDITKAWKLICDVSRQELNKIYDALDVSLIERGESFYQDRMNDIVKEFEDRGFVQVDDG 360
Query: 361 RKIVFVPGCSIPLTIVKSDGGYTYDTSDLAAIKQRLFEEKADMIIYVVDNGQSVHFQTIF 420
RKIVFVPGCSIPLTIVKSDGGYTYDTSDLAAIKQRLFEEKADMIIYVVDNGQSVHFQTIF
Sbjct: 361 RKIVFVPGCSIPLTIVKSDGGYTYDTSDLAAIKQRLFEEKADMIIYVVDNGQSVHFQTIF 420
Query: 421 AAAQMIGWYDPKVTRVFHAGFGVVLGEDKKKFKTRSGETVRLMDLLGEGLKRSMDKLKEK 480
AAAQMIGWYDPKVTRVFHAGFGVVLGEDKKKFKTRSGETVRLMDLLGEGLKRSMDKLKEK
Sbjct: 421 AAAQMIGWYDPKVTRVFHAGFGVVLGEDKKKFKTRSGETVRLMDLLGEGLKRSMDKLKEK 480
Query: 481 ERDKVLTAEELNAAQTSVAYGCIKYADLSHNRLNDYIFSFDKMLDDRGNTAAYLLYAFTR 540
ERDKVLTAEELNAAQTSVAYGCIKYADLSHNRLNDYIFSFDKMLDDRGNTAAYLLYAFTR
Sbjct: 481 ERDKVLTAEELNAAQTSVAYGCIKYADLSHNRLNDYIFSFDKMLDDRGNTAAYLLYAFTR 540
Query: 541 IRSIARLANIDEEMLQKAARETKILLDHEKEWKLGRCILRFPEILQKILDDLFLHTLCDY 600
IRSIARLANIDEEMLQKAARETKILLDHEKEWKLGRCILRFPEILQKILDDLFLHTLCDY
Sbjct: 541 IRSIARLANIDEEMLQKAARETKILLDHEKEWKLGRCILRFPEILQKILDDLFLHTLCDY 600
Query: 601 IYELATAFTEFYDSCYCVEKDRQTGKILKVNMWRMLLCEAVAAVMAKGFDILGIKPVQRM 660
IYELATAFTEFYDSCYCVEKDRQTGKILKVNMWRMLLCEAVAAVMAKGFDILGIKPVQRM
Sbjct: 601 IYELATAFTEFYDSCYCVEKDRQTGKILKVNMWRMLLCEAVAAVMAKGFDILGIKPVQRM 660
>gi|197100773 arginyl-tRNA synthetase 2, mitochondrial precursor
[Homo sapiens]
Length = 578
Score = 205 bits (521), Expect = 1e-52
Identities = 166/576 (28%), Positives = 275/576 (47%), Gaps = 51/576 (8%)
Query: 105 SQQAKFGDYQCNSAMGISQMLKTKEQKVNP--REIAENITKHLPDNECIEKVEIAGPGFI 162
SQ+ + D+Q + + +L+ P + A+ + + L + + ++ G +
Sbjct: 34 SQKEEVADFQ----LSVDSLLEKDNDHSRPDIQVQAKRLAEKLRCDTVVSEIS-TGQRTV 88
Query: 163 NVHLRKDFVSEQ-LTSLLVNGVQLPALGE------NKKVIVDFSSPNIAKEMHVGHLRST 215
N + ++ +++ L ++ +G + E KK++V+FSSPN+AK+ HVGHLRST
Sbjct: 89 NFKINRELLTKTVLQQVIEDGSKYGLKSELFSGLPQKKIVVEFSSPNVAKKFHVGHLRST 148
Query: 216 IIGESISRLFEFAGYDVLRLNHVGDWGTQFGMLIAHLQDKFPDYLTVSPPIGDLQVFYKE 275
IIG I+ L E G+ V+R+N++GDWG QFG+L Q + S P+ L Y +
Sbjct: 149 IIGNFIANLKEALGHQVIRINYLGDWGMQFGLLGTGFQLFGYEEKLQSNPLQHLFEVYVQ 208
Query: 276 SKKRFDTEEEFKKRAYQCVVLLQGKNPDITKAWKLICDVSRQELNKIYDALDVSLIE-RG 334
K ++ K A + L+ + W+ D+S +E ++Y L V E G
Sbjct: 209 VNKEAADDKSVAKAAQEFFQRLELGDVQALSLWQKFRDLSIEEYIRVYKRLGVYFDEYSG 268
Query: 335 ESFYQDRMNDIVKEFEDRG-FVQVDDGRKIVFVPGCSIP---LTIVKSDGGYTYDTSDLA 390
ESFY+++ +++K E +G ++ G +V + G P T+++SDG Y T DLA
Sbjct: 269 ESFYREKSQEVLKLLESKGLLLKTIKGTAVVDLSGNGDPSSICTVMRSDGTSLYATRDLA 328
Query: 391 AIKQRLFEEKADMIIYVVDNGQSVHFQTIFAAAQMIGWYDPKVTRVFHAGFGVVLGEDKK 450
A R+ + D +IYV D GQ HFQ +F +++G YD R H FGVV G
Sbjct: 329 AAIDRMDKYNFDTMIYVTDKGQKKHFQQVFQMLKIMG-YD-WAERCQHVPFGVVQG---- 382
Query: 451 KFKTRSGETVRLMDLLGEGLKRSMDKLKEKERDKVLTAEELNAAQTSVAYGCIKYADLSH 510
KTR G+ L D+L E R + + + K L + A + +A I+ D
Sbjct: 383 -MKTRRGDVTFLEDVLNEIQLRMLQNMASIKTTKELKNPQETAERVGLAALIIQ--DFKG 439
Query: 511 NRLNDYIFSFDKMLDDRGNTAAYLLYAFTRIRSIAR------LANIDEEMLQKAARETKI 564
L+DY FS+D++ RG+T +L Y R+ S+ L + + LQ+ ++
Sbjct: 440 LLLSDYKFSWDRVFQSRGDTGVFLQYTHARLHSLEETFGCGYLNDFNTACLQEP--QSVS 497
Query: 565 LLDHEKEWKLGRCILRFPEILQKILDDLFLHTLCDYIYELATAFTEFYDSCYCVEKDRQT 624
+L H +LRF E+L K D + Y+ L+ + + + +
Sbjct: 498 ILQH---------LLRFDEVLYKSSQDFQPRHIVSYLLTLSHLAAVAHKTLQIKDSPPEV 548
Query: 625 GKILKVNMWRMLLCEAVAAVMAKGFDILGIKPVQRM 660
R+ L +AV +V+A G +LGI PV RM
Sbjct: 549 AGA------RLHLFKAVRSVLANGMKLLGITPVCRM 578
>gi|40538799 ataxin-1 ubiquitin-like interacting protein [Homo
sapiens]
Length = 601
Score = 38.9 bits (89), Expect = 0.015
Identities = 28/110 (25%), Positives = 54/110 (49%), Gaps = 12/110 (10%)
Query: 37 ASPNLEQLQEENLKLKYRLN---ILRKSLQAERN-----KPTKNMINIISRLQEVFG--H 86
A+P ++QL E N ++ + LN ++R++++ RN + +N +S L+ + G +
Sbjct: 221 ANPQMQQLMERNPEISHMLNNPELMRQTMELARNPAMMQEMMRNQDRALSNLESIPGGYN 280
Query: 87 AIKAAYPDLENPPLLVTPSQ--QAKFGDYQCNSAMGISQMLKTKEQKVNP 134
A++ Y D++ P Q F NS SQ L+T+ ++ P
Sbjct: 281 ALRRMYTDIQEPMFSAAREQFGNNPFSSLAGNSDSSSSQPLRTENREPLP 330
>gi|38570111 threonyl-tRNA synthetase-like 2 [Homo sapiens]
Length = 802
Score = 37.0 bits (84), Expect = 0.058
Identities = 24/70 (34%), Positives = 40/70 (57%), Gaps = 10/70 (14%)
Query: 9 SARLLQQEEEIKSLTAEIDRLKN------CGCLGASP----NLEQLQEENLKLKYRLNIL 58
++RL +QEE+I+ L +E++RL++ C P + QL+ EN L++RL L
Sbjct: 12 ASRLERQEEDIRWLWSEVERLRDEQLNAPYSCQAEGPCLTREVAQLRAENCDLRHRLCSL 71
Query: 59 RKSLQAERNK 68
R L ER++
Sbjct: 72 RLCLAEERSR 81
Score = 29.6 bits (65), Expect = 9.3
Identities = 36/149 (24%), Positives = 62/149 (41%), Gaps = 18/149 (12%)
Query: 8 CSARLLQQEEEIKSLTAEIDRLKNCGCLGASPNLEQLQEENLKLKYRLNILRKSLQAERN 67
CS RL EE + T E L+ GA P Q Q++++K K K ++E +
Sbjct: 69 CSLRLCLAEERSRQATLESAELEAAQEAGAQPPPSQSQDKDMKKK-------KMKESEAD 121
Query: 68 KPTKNMINIISRLQEVFGHAIKAAYPDLENPPLLVTPSQQAKFGDYQCNSAMGIS--QML 125
K+ I ++F K ++ LL K GD + ++ Q +
Sbjct: 122 SEVKHQPIFIKERLKLFEILKK------DHQLLLAI---YGKKGDTSNIITVRVADGQTV 172
Query: 126 KTKEQKVNPREIAENITKHLPDNECIEKV 154
+ + K P ++A I++ L ++ I KV
Sbjct: 173 QGEVWKTTPYQVAAEISQELAESTVIAKV 201
>gi|16753205 ubiquilin 1 isoform 2 [Homo sapiens]
Length = 561
Score = 35.0 bits (79), Expect = 0.22
Identities = 22/80 (27%), Positives = 43/80 (53%), Gaps = 10/80 (12%)
Query: 37 ASPNLEQLQEENLKLKYRLN---ILRKSLQAERN-----KPTKNMINIISRLQEVFG--H 86
A+P ++QL + N ++ + LN I+R++L+ RN + +N +S L+ + G +
Sbjct: 211 ANPQMQQLIQRNPEISHMLNNPDIMRQTLELARNPAMMQEMMRNQDRALSNLESIPGGYN 270
Query: 87 AIKAAYPDLENPPLLVTPSQ 106
A++ Y D++ P L Q
Sbjct: 271 ALRRMYTDIQEPMLSAAQEQ 290
>gi|16753203 ubiquilin 1 isoform 1 [Homo sapiens]
Length = 589
Score = 35.0 bits (79), Expect = 0.22
Identities = 22/80 (27%), Positives = 43/80 (53%), Gaps = 10/80 (12%)
Query: 37 ASPNLEQLQEENLKLKYRLN---ILRKSLQAERN-----KPTKNMINIISRLQEVFG--H 86
A+P ++QL + N ++ + LN I+R++L+ RN + +N +S L+ + G +
Sbjct: 211 ANPQMQQLIQRNPEISHMLNNPDIMRQTLELARNPAMMQEMMRNQDRALSNLESIPGGYN 270
Query: 87 AIKAAYPDLENPPLLVTPSQ 106
A++ Y D++ P L Q
Sbjct: 271 ALRRMYTDIQEPMLSAAQEQ 290
>gi|156415984 tropomodulin 4 (muscle) [Homo sapiens]
Length = 345
Score = 34.3 bits (77), Expect = 0.38
Identities = 36/165 (21%), Positives = 73/165 (44%), Gaps = 27/165 (16%)
Query: 10 ARLLQQEEEIKSLTAEIDRLKNCGCLGASPNLEQLQEENLKLKYRLNIL--------RKS 61
A L Q+++ KS T +DR L+ L+++ L++K R +++ +
Sbjct: 47 AGLRQRDQTKKSPTGPLDR---------EALLQYLEQQALEVKERDDLVPFTGEKKGKPY 97
Query: 62 LQAERNKPTKNMINIISRLQEVFGHAIKAAYPDLENPPLLVTPSQQAKFGDYQCNSAM-- 119
+Q +R P + I + L+E HA A D+ + T ++ D C+ +
Sbjct: 98 IQPKREIPAEEQITLEPELEEALAHATDAEMCDIAAILDMYTLMSNKQYYDALCSGEICN 157
Query: 120 --GISQMLKTKEQK------VNPREIAENITKHLPDNECIEKVEI 156
GIS +++ + K NP I E + + +++ +E+V +
Sbjct: 158 TEGISSVVQPDKYKPVPDEPPNPTNIEEILKRVRSNDKELEEVNL 202
>gi|157694505 LINE-1 type transposase domain containing 1 [Homo
sapiens]
Length = 865
Score = 33.5 bits (75), Expect = 0.64
Identities = 31/132 (23%), Positives = 56/132 (42%), Gaps = 18/132 (13%)
Query: 249 IAHLQDKFPDYLTVSPPIGDLQVFYKESKKRFDTEE----EFKKRAYQCVVLLQGKNPDI 304
I +L+ L + + DL ++R D+ E EF K Q +
Sbjct: 632 IGNLKSSHSGVLEIENSVDDLSSRMDILEERIDSLEDQIEEFSKDTMQ-----------M 680
Query: 305 TKAWKLICDVSRQELNKIYDALDVSLIERGES-FYQDRMNDIVKEFEDRGFVQVDDGRKI 363
TK ++I ++++ + + ++ LI E Y++R DI+KE D F ++ G +
Sbjct: 681 TK--QIISKERQRDIEERSRSCNIRLIGIPEKESYENRAEDIIKEIIDENFAELKKGSSL 738
Query: 364 VFVPGCSIPLTI 375
V C +P I
Sbjct: 739 EIVSACRVPSKI 750
>gi|109255234 centrosomal protein 290kDa [Homo sapiens]
Length = 2479
Score = 33.1 bits (74), Expect = 0.84
Identities = 34/137 (24%), Positives = 61/137 (44%), Gaps = 22/137 (16%)
Query: 16 EEEIKSLTAEIDRLKNCGCLGASPNLEQLQEENLKLKYRLNILRKSLQAERNKPTKNMIN 75
E+E+K + AE++ LK L+Q Q+E+ LK L + +A PT M N
Sbjct: 1677 EDEVKKVKAEVEDLKYL--------LDQSQKESQCLKSELQAQK---EANSRAPTTTMRN 1725
Query: 76 IISRLQEVFGHAIKAAYPDLENPPLLVTPSQQAKFGDYQCNSA-------MGISQML--K 126
++ RL+ A+K + LL ++ + + SA + + Q++
Sbjct: 1726 LVERLKSQL--ALKEKQQKALSRALLELRAEMTAAAEERIISATSQKEAHLNVQQIVDRH 1783
Query: 127 TKEQKVNPREIAENITK 143
T+E K ++ EN+ K
Sbjct: 1784 TRELKTQVEDLNENLLK 1800
>gi|29294649 dicer1 [Homo sapiens]
Length = 1922
Score = 32.7 bits (73), Expect = 1.1
Identities = 33/120 (27%), Positives = 49/120 (40%), Gaps = 33/120 (27%)
Query: 452 FKTRSGETVRLMDLLGEGLKRSMDKLKEKERDKVL--TAEELNAAQTSVA---------- 499
+ T GE + L GLK + +K +R+K L T E N+ Q +++
Sbjct: 1570 YLTSCGERAAQLFLCSLGLK-VLPVIKRTDREKALCPTRENFNSQQKNLSVSCAAASVAS 1628
Query: 500 ----------YGCIKY----------ADLSHNRLNDYIFSFDKMLDDRGNTAAYLLYAFT 539
YGC+K AD + N L +F+K ++ R AYLL AFT
Sbjct: 1629 SRSSVLKDSEYGCLKIPPRCMFDHPDADKTLNHLISGFENFEKKINYRFKNKAYLLQAFT 1688
>gi|29294651 dicer1 [Homo sapiens]
Length = 1922
Score = 32.7 bits (73), Expect = 1.1
Identities = 33/120 (27%), Positives = 49/120 (40%), Gaps = 33/120 (27%)
Query: 452 FKTRSGETVRLMDLLGEGLKRSMDKLKEKERDKVL--TAEELNAAQTSVA---------- 499
+ T GE + L GLK + +K +R+K L T E N+ Q +++
Sbjct: 1570 YLTSCGERAAQLFLCSLGLK-VLPVIKRTDREKALCPTRENFNSQQKNLSVSCAAASVAS 1628
Query: 500 ----------YGCIKY----------ADLSHNRLNDYIFSFDKMLDDRGNTAAYLLYAFT 539
YGC+K AD + N L +F+K ++ R AYLL AFT
Sbjct: 1629 SRSSVLKDSEYGCLKIPPRCMFDHPDADKTLNHLISGFENFEKKINYRFKNKAYLLQAFT 1688
>gi|216548091 leucine zipper protein 1 [Homo sapiens]
Length = 1076
Score = 32.7 bits (73), Expect = 1.1
Identities = 22/70 (31%), Positives = 41/70 (58%), Gaps = 9/70 (12%)
Query: 14 QQEEEIKSLTAEIDRLKNCGCLGASPNLEQLQEENLKLKYRLNILRKSLQAERNKPTKNM 73
Q++ ++K L EI++LK + E L+EE K+K + N L+ + +E+N KN
Sbjct: 283 QEDNKVKDLNQEIEKLKT-----QIKHFESLEEELKKMKSKNNDLQDNYLSEQN---KNK 334
Query: 74 INIISRLQEV 83
+ + S+L+E+
Sbjct: 335 L-LASQLEEI 343
>gi|216548085 leucine zipper protein 1 [Homo sapiens]
Length = 1076
Score = 32.7 bits (73), Expect = 1.1
Identities = 22/70 (31%), Positives = 41/70 (58%), Gaps = 9/70 (12%)
Query: 14 QQEEEIKSLTAEIDRLKNCGCLGASPNLEQLQEENLKLKYRLNILRKSLQAERNKPTKNM 73
Q++ ++K L EI++LK + E L+EE K+K + N L+ + +E+N KN
Sbjct: 283 QEDNKVKDLNQEIEKLKT-----QIKHFESLEEELKKMKSKNNDLQDNYLSEQN---KNK 334
Query: 74 INIISRLQEV 83
+ + S+L+E+
Sbjct: 335 L-LASQLEEI 343
>gi|38044112 restin isoform b [Homo sapiens]
Length = 1392
Score = 32.3 bits (72), Expect = 1.4
Identities = 32/140 (22%), Positives = 66/140 (47%), Gaps = 19/140 (13%)
Query: 1 MDVLVSECSARLLQQEEEIKSLTAEIDRLKNCGCLGASPNLEQLQEENLKLKYRLNILRK 60
M+ L ++ + ++E ++++ +++D+ ++ + L +LQE +K+K L +
Sbjct: 646 MEALRAKLMKVIKEKENSLEAIRSKLDKAEDQHLVEMEDTLNKLQEAEIKVK-ELEV--- 701
Query: 61 SLQAERNKPTKNMINIISRLQEVFGHAIKAAYPDLENPPLLVTPSQQAKFGDYQCNSAMG 120
LQA+ N+ TK + N S+L KA L + L S + K +
Sbjct: 702 -LQAKCNEQTKVIDNFTSQL--------KATEEKLLDLDALRKASSEGK------SEMKK 746
Query: 121 ISQMLKTKEQKVNPREIAEN 140
+ Q L+ E+++ EI +N
Sbjct: 747 LRQQLEAAEKQIKHLEIEKN 766
>gi|4506751 restin isoform a [Homo sapiens]
Length = 1427
Score = 32.3 bits (72), Expect = 1.4
Identities = 32/140 (22%), Positives = 66/140 (47%), Gaps = 19/140 (13%)
Query: 1 MDVLVSECSARLLQQEEEIKSLTAEIDRLKNCGCLGASPNLEQLQEENLKLKYRLNILRK 60
M+ L ++ + ++E ++++ +++D+ ++ + L +LQE +K+K L +
Sbjct: 681 MEALRAKLMKVIKEKENSLEAIRSKLDKAEDQHLVEMEDTLNKLQEAEIKVK-ELEV--- 736
Query: 61 SLQAERNKPTKNMINIISRLQEVFGHAIKAAYPDLENPPLLVTPSQQAKFGDYQCNSAMG 120
LQA+ N+ TK + N S+L KA L + L S + K +
Sbjct: 737 -LQAKCNEQTKVIDNFTSQL--------KATEEKLLDLDALRKASSEGK------SEMKK 781
Query: 121 ISQMLKTKEQKVNPREIAEN 140
+ Q L+ E+++ EI +N
Sbjct: 782 LRQQLEAAEKQIKHLEIEKN 801
>gi|122937345 myosin VB [Homo sapiens]
Length = 1848
Score = 31.6 bits (70), Expect = 2.4
Identities = 38/146 (26%), Positives = 62/146 (42%), Gaps = 17/146 (11%)
Query: 14 QQEEEIKSLTAE-----IDRLKNCGCLGASPNLEQLQEENLKLKYRLNILRKSL--QAER 66
+++++ K + AE ID N S ++L+ EN KLK LN LRK++ QA +
Sbjct: 1170 REQQDSKKVQAEPPQTDIDLDPNADLAYNSLKRQELESENKKLKNDLNELRKAVADQATQ 1229
Query: 67 NKPTKNMINIISRLQEVFGHAIKAAYPDLENPPLLVTPSQQAKFGDYQCNSAMGISQMLK 126
N + + S L + +K A+ +LE ++ Q SA +
Sbjct: 1230 NNSSHGSPDSYSLLL----NQLKLAHEELE------VRKEEVLILRTQIVSADQRRLAGR 1279
Query: 127 TKEQKVNPREIAENITKHLPDNECIE 152
E +N R N KH+ + IE
Sbjct: 1280 NAEPNINARSSWPNSEKHVDQEDAIE 1305
>gi|14670362 POZ (BTB) and AT hook containing zinc finger 1 long A
isoform [Homo sapiens]
Length = 641
Score = 31.2 bits (69), Expect = 3.2
Identities = 27/93 (29%), Positives = 42/93 (45%), Gaps = 4/93 (4%)
Query: 91 AYPDLENPPLLVTPSQQAKFGDYQCNSAMGISQMLKTKEQKVNPREIAENITKHLPDNEC 150
+Y DL + L TP +Q+ G + C+ A+ ++M E+K E N+
Sbjct: 518 SYGDLSDASDLKTPEKQSANGSFSCDMAVPKNKMESDGEKKYPCPECGSFFRSKSYLNKH 577
Query: 151 IEKVEI---AGP-GFINVHLRKDFVSEQLTSLL 179
I+KV + GP G + L F +Q SLL
Sbjct: 578 IQKVHVRALGGPLGDLGPALGSPFSPQQNMSLL 610
>gi|14670360 POZ (BTB) and AT hook containing zinc finger 1 long C
isoform [Homo sapiens]
Length = 687
Score = 31.2 bits (69), Expect = 3.2
Identities = 27/93 (29%), Positives = 42/93 (45%), Gaps = 4/93 (4%)
Query: 91 AYPDLENPPLLVTPSQQAKFGDYQCNSAMGISQMLKTKEQKVNPREIAENITKHLPDNEC 150
+Y DL + L TP +Q+ G + C+ A+ ++M E+K E N+
Sbjct: 564 SYGDLSDASDLKTPEKQSANGSFSCDMAVPKNKMESDGEKKYPCPECGSFFRSKSYLNKH 623
Query: 151 IEKVEI---AGP-GFINVHLRKDFVSEQLTSLL 179
I+KV + GP G + L F +Q SLL
Sbjct: 624 IQKVHVRALGGPLGDLGPALGSPFSPQQNMSLL 656
>gi|218505835 membrane-associated guanylate kinase-related 3 isoform
1 [Homo sapiens]
Length = 1481
Score = 31.2 bits (69), Expect = 3.2
Identities = 20/67 (29%), Positives = 35/67 (52%), Gaps = 7/67 (10%)
Query: 445 LGEDKKKFKTRSGETVRLMDLLGEGLKRSMDKLKEKERDKVLT-------AEELNAAQTS 497
+ E++K K +GET D +GE ++ S +LK++ +KV++ +EL AA +
Sbjct: 1379 VSENEKGKKVTTGETSSSNDKIGENVQLSEKRLKQEPEEKVVSNKTEDHKGKELEAADKN 1438
Query: 498 VAYGCIK 504
G K
Sbjct: 1439 KETGRFK 1445
>gi|87298937 centrosomal protein 110kDa [Homo sapiens]
Length = 2325
Score = 31.2 bits (69), Expect = 3.2
Identities = 42/177 (23%), Positives = 77/177 (43%), Gaps = 27/177 (15%)
Query: 7 ECSARLLQQEEEIKSLTAEIDRLKNCGCLGASPNLEQLQEENLKLKYRLNILRKSLQAER 66
E +A L Q + ++ + AE++ N A+ QL+EE K+ + + +LQAE
Sbjct: 689 EVNASLQQTQGDLSAYEAELEARLNLRDAEAN----QLKEELEKVTRLTQLEQSALQAEL 744
Query: 67 NKPTKNMINIISRLQ-----EVFGHAIKAAYPDLENPPLLVTPSQQAKFGDYQCNSAMGI 121
K + + N + + Q E + A L++ L+ QQ K D+Q
Sbjct: 745 EKERQALKNALGKAQFSEEKEQENSELHAKLKHLQDDNNLL--KQQLK--DFQ------- 793
Query: 122 SQMLKTKEQKVNPREIAENITKHLPDNECIEKVEIAGPGFINVHLRKDFVSEQLTSL 178
+ + + V P E+A + +E K+++ G G +N+H D + + L L
Sbjct: 794 NHLNHVVDGLVRPEEVAARV------DELRRKLKL-GTGEMNIHSPSDVLGKSLADL 843
>gi|19718764 ubiquitin protein ligase E3A isoform 3 [Homo sapiens]
Length = 872
Score = 30.8 bits (68), Expect = 4.2
Identities = 19/81 (23%), Positives = 39/81 (48%), Gaps = 7/81 (8%)
Query: 335 ESFYQDRMNDIVKEFEDRGFVQVDDGRKIVFVPGCSIPLTIVKSDGGYTYDTSDLAAIKQ 394
E F + +N++++ +D F +V+ K F+ C L V + G YD +
Sbjct: 444 EEFINEPLNEVLEMDKDYTFFKVETENKFSFMT-CPFILNAVTKNLGLYYDN------RI 496
Query: 395 RLFEEKADMIIYVVDNGQSVH 415
R++ E+ ++Y + GQ ++
Sbjct: 497 RMYSERRITVLYSLVQGQQLN 517
>gi|19718762 ubiquitin protein ligase E3A isoform 1 [Homo sapiens]
Length = 852
Score = 30.8 bits (68), Expect = 4.2
Identities = 19/81 (23%), Positives = 39/81 (48%), Gaps = 7/81 (8%)
Query: 335 ESFYQDRMNDIVKEFEDRGFVQVDDGRKIVFVPGCSIPLTIVKSDGGYTYDTSDLAAIKQ 394
E F + +N++++ +D F +V+ K F+ C L V + G YD +
Sbjct: 424 EEFINEPLNEVLEMDKDYTFFKVETENKFSFMT-CPFILNAVTKNLGLYYDN------RI 476
Query: 395 RLFEEKADMIIYVVDNGQSVH 415
R++ E+ ++Y + GQ ++
Sbjct: 477 RMYSERRITVLYSLVQGQQLN 497
>gi|19718766 ubiquitin protein ligase E3A isoform 2 [Homo sapiens]
Length = 875
Score = 30.8 bits (68), Expect = 4.2
Identities = 19/81 (23%), Positives = 39/81 (48%), Gaps = 7/81 (8%)
Query: 335 ESFYQDRMNDIVKEFEDRGFVQVDDGRKIVFVPGCSIPLTIVKSDGGYTYDTSDLAAIKQ 394
E F + +N++++ +D F +V+ K F+ C L V + G YD +
Sbjct: 447 EEFINEPLNEVLEMDKDYTFFKVETENKFSFMT-CPFILNAVTKNLGLYYDN------RI 499
Query: 395 RLFEEKADMIIYVVDNGQSVH 415
R++ E+ ++Y + GQ ++
Sbjct: 500 RMYSERRITVLYSLVQGQQLN 520
>gi|30581135 structural maintenance of chromosomes 1A [Homo sapiens]
Length = 1233
Score = 30.8 bits (68), Expect = 4.2
Identities = 21/80 (26%), Positives = 43/80 (53%), Gaps = 3/80 (3%)
Query: 274 KESKKRFDTEEEF---KKRAYQCVVLLQGKNPDITKAWKLICDVSRQELNKIYDALDVSL 330
+E++KR + EE+ K++ + L+G+ + + K D +ELN++ + L +
Sbjct: 429 EENQKRIEKLEEYITTSKQSLEEQKKLEGELTEEVEMAKRRIDEINKELNQVMEQLGDAR 488
Query: 331 IERGESFYQDRMNDIVKEFE 350
I+R ES Q R +I++ +
Sbjct: 489 IDRQESSRQQRKAEIMESIK 508
>gi|14195601 protein phosphatase 1, regulatory (inhibitor) subunit
12B isoform b [Homo sapiens]
Length = 998
Score = 30.4 bits (67), Expect = 5.4
Identities = 34/142 (23%), Positives = 63/142 (44%), Gaps = 16/142 (11%)
Query: 355 VQVDDGRKIVFVPGCS------IPLTIVKSDGGYTYDTSDLAAIKQRLFEEKADMIIYVV 408
V+ +DG VF+ CS + + + T + L A+ Q +E DM+ ++V
Sbjct: 54 VRFEDGA--VFLAACSSGDTDEVRKLLARGADINTVNVDGLTALHQACIDENLDMVKFLV 111
Query: 409 DNGQSVHFQ-----TIFAAAQMIGWYDPKVTRVFH-AGFGVVLGEDKKKFKTRSGETVRL 462
+N +V+ Q T AA G+ + + H A G+V E + + E +
Sbjct: 112 ENRANVNQQDNEGWTPLHAAASCGYLNIAEYFINHGASVGIVNSEG--EVPSDLAEEPAM 169
Query: 463 MDLLGEGLKRSMDKLKEKERDK 484
DLL E +K+ L++ +++
Sbjct: 170 KDLLLEQVKKQGIDLEQSRKEE 191
>gi|4505319 protein phosphatase 1, regulatory (inhibitor) subunit
12B isoform a [Homo sapiens]
Length = 982
Score = 30.4 bits (67), Expect = 5.4
Identities = 34/142 (23%), Positives = 63/142 (44%), Gaps = 16/142 (11%)
Query: 355 VQVDDGRKIVFVPGCS------IPLTIVKSDGGYTYDTSDLAAIKQRLFEEKADMIIYVV 408
V+ +DG VF+ CS + + + T + L A+ Q +E DM+ ++V
Sbjct: 54 VRFEDGA--VFLAACSSGDTDEVRKLLARGADINTVNVDGLTALHQACIDENLDMVKFLV 111
Query: 409 DNGQSVHFQ-----TIFAAAQMIGWYDPKVTRVFH-AGFGVVLGEDKKKFKTRSGETVRL 462
+N +V+ Q T AA G+ + + H A G+V E + + E +
Sbjct: 112 ENRANVNQQDNEGWTPLHAAASCGYLNIAEYFINHGASVGIVNSEG--EVPSDLAEEPAM 169
Query: 463 MDLLGEGLKRSMDKLKEKERDK 484
DLL E +K+ L++ +++
Sbjct: 170 KDLLLEQVKKQGIDLEQSRKEE 191
>gi|22208850 Golgi coiled-coil protein 1 [Homo sapiens]
Length = 775
Score = 30.4 bits (67), Expect = 5.4
Identities = 38/151 (25%), Positives = 63/151 (41%), Gaps = 34/151 (22%)
Query: 11 RLLQQEEEIKSLTAEIDRLKNCGCLGASPNLEQLQEENLKLKYRLNI-----LRKSLQAE 65
+L ++ EE+KS I KN P L++LQEE +LK +RK+ AE
Sbjct: 294 QLTREVEELKSELQAIRDEKN----QPDPRLQELQEEAARLKSHFQAQLQQEMRKTALAE 349
Query: 66 RNKPTKNMI---------NIISRLQEVFGHAIKAAYP---------------DLENPPLL 101
++ + N IS + E+ G KA DLEN L
Sbjct: 350 DQLRQQSQVEEQRVAALENQISEVSELLGTYEKAKQKDQLAIQKLKERILQLDLENKTLA 409
Query: 102 VTPSQQAKFGDYQCNSAMGISQMLKTKEQKV 132
+ S ++ + S++ ++ +LK K +K+
Sbjct: 410 LAASSRSPLDSHGEESSLDVN-VLKDKMEKL 439
>gi|148762940 DVL-binding protein DAPLE [Homo sapiens]
Length = 2028
Score = 30.4 bits (67), Expect = 5.4
Identities = 19/65 (29%), Positives = 40/65 (61%), Gaps = 3/65 (4%)
Query: 5 VSEC-SARLLQQEEEIKSLTAEIDRLKNCGCLGASPNLE--QLQEENLKLKYRLNILRKS 61
++EC S+R+L+ E+E +SL + I L++ + L+ +L++EN +L ++ L+
Sbjct: 457 LNECASSRILKLEKENQSLQSTIQGLRDASLVLEESGLKCGELEKENHQLSKKIEKLQTQ 516
Query: 62 LQAER 66
L+ E+
Sbjct: 517 LEREK 521
>gi|205277396 dynactin 1 isoform 4 [Homo sapiens]
Length = 1139
Score = 30.0 bits (66), Expect = 7.1
Identities = 26/82 (31%), Positives = 43/82 (52%), Gaps = 11/82 (13%)
Query: 1 MDVLVSECSARLLQQE-----EEIKSLTAEIDRLK----NCGCLGASPN--LEQLQEENL 49
+D ++E A LQQE E + LT +++ LK G GA+ + L+QL+E+N
Sbjct: 175 LDKEMAEERAESLQQEVEALKERVDELTTDLEILKAEIEEKGSDGAASSYQLKQLEEQNA 234
Query: 50 KLKYRLNILRKSLQAERNKPTK 71
+LK L +R +E+ + K
Sbjct: 235 RLKDALVRMRDLSSSEKQEHVK 256
>gi|205277392 dynactin 1 isoform 3 [Homo sapiens]
Length = 1253
Score = 30.0 bits (66), Expect = 7.1
Identities = 26/82 (31%), Positives = 43/82 (52%), Gaps = 11/82 (13%)
Query: 1 MDVLVSECSARLLQQE-----EEIKSLTAEIDRLK----NCGCLGASPN--LEQLQEENL 49
+D ++E A LQQE E + LT +++ LK G GA+ + L+QL+E+N
Sbjct: 289 LDKEMAEERAESLQQEVEALKERVDELTTDLEILKAEIEEKGSDGAASSYQLKQLEEQNA 348
Query: 50 KLKYRLNILRKSLQAERNKPTK 71
+LK L +R +E+ + K
Sbjct: 349 RLKDALVRMRDLSSSEKQEHVK 370
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.321 0.138 0.400
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 23,413,073
Number of Sequences: 37866
Number of extensions: 1003503
Number of successful extensions: 3064
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 32
Number of HSP's that attempted gapping in prelim test: 3021
Number of HSP's gapped (non-prelim): 81
length of query: 660
length of database: 18,247,518
effective HSP length: 109
effective length of query: 551
effective length of database: 14,120,124
effective search space: 7780188324
effective search space used: 7780188324
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.