PATZ1 4275

Name: PATZ1	Sequence: fasta or formatted (641aa)		NCBI GI: 14670362
Description: POZ (BTB) and AT hook containing zinc finger 1 long A isoform		Referenced in: Kruppel-related Zinc Finger Proteins
Other entries for this name: alt prot [687aa] POZ (BTB) and AT hook containing zinc finger 1 long C isoform alt prot [537aa] POZ (BTB) and AT hook containing zinc finger 1 short isoform alt prot [537aa] POZ (BTB) and AT hook containing zinc finger 1 long B isoform
Composition: Amino acid Percentage Count Longest homopolymer A alanine 8.1 52 2 C cysteine 3.7 24 1 D aspartate 5.3 34 1 E glutamate 5.0 32 3 F phenylalanine 3.9 25 2 G glycine 10.0 64 3 H histidine 3.4 22 1 I isoleucine 3.3 21 1 K lysine 5.1 33 2 L leucine 8.3 53 2 M methionine 2.5 16 1 N asparagine 3.1 20 1 P proline 7.5 48 3 Q glutamine 4.4 28 2 R arginine 6.4 41 1 S serine 9.8 63 2 T threonine 2.7 17 1 V valine 5.3 34 2 W tryptophan 0.0 0 0 Y tyrosine 2.2 14 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 POZ (BTB) and AT hook containing zinc finger 1 long ... PATZ1 0.983 POZ (BTB) and AT hook containing zinc finger 1 long ... PATZ1 0.780 POZ (BTB) and AT hook containing zinc finger 1 long ... PATZ1 0.684 POZ (BTB) and AT hook containing zinc finger 1 short... MAZ 0.186 MYC-associated zinc finger protein isoform 1 MAZ 0.184 MYC-associated zinc finger protein isoform 2 VEZF1 0.163 zinc finger protein 161 ZNF559 0.095 zinc finger protein 559 ZNF493 0.094 zinc finger protein 493 isoform 1 ZNF493 0.094 zinc finger protein 493 isoform 3 ZNF814 0.093 zinc finger protein 814 LOC654254 0.093 zinc finger protein LOC654254 ZNF486 0.091 zinc finger protein 486 ZNF506 0.090 zinc finger protein 506 isoform 1 ZNF506 0.090 zinc finger protein 506 isoform 2 ZNF681 0.090 zinc finger protein 681 ZNF708 0.089 zinc finger protein 708 ZNF595 0.089 zinc finger protein 595 ZNF100 0.089 zinc finger protein 100 ZNF429 0.088 zinc finger protein 429 ZNF211 0.088 zinc finger protein 211 isoform 2 ZNF211 0.088 zinc finger protein 211 isoform 1 ZNF675 0.088 zinc finger protein 675 ZNF253 0.088 zinc finger protein 253 LOC646864 0.087 PREDICTED: similar to hCG36734 LOC646864 0.087 PREDICTED: similar to hCG36734 LOC646864 0.087 PREDICTED: similar to hCG36734 ZNF98 0.087 zinc finger protein 98 ZNF436 0.087 zinc finger protein 436 ZNF436 0.087 zinc finger protein 436 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.