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Search of human proteins with 15082236
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|15082236 transmembrane protein 10 isoform a [Homo sapiens]
(141 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|15082236 transmembrane protein 10 isoform a [Homo sapiens] 286 5e-78
gi|91932793 transmembrane protein 10 isoform c [Homo sapiens] 260 2e-70
gi|91932795 transmembrane protein 10 isoform b [Homo sapiens] 239 7e-64
gi|13376115 adipocyte-specific adhesion molecule [Homo sapiens] 37 0.007
gi|11138123 cholinergic receptor, nicotinic, alpha 10 [Homo sapi... 30 0.66
gi|11641231 ectodysplasin A receptor precursor [Homo sapiens] 30 0.66
gi|52630342 major histocompatibility complex, class I, C precurs... 29 1.1
gi|4502263 activating transcription factor 3 isoform 1 [Homo sap... 29 1.1
gi|95102483 activating transcription factor 3 isoform 2 [Homo sa... 29 1.1
gi|71902536 activating transcription factor 3 isoform 1 [Homo sa... 29 1.1
gi|126362953 leukocyte immunoglobulin-like receptor, subfamily B... 29 1.1
gi|126362951 leukocyte immunoglobulin-like receptor, subfamily B... 29 1.1
gi|157952215 protein tyrosine phosphatase, receptor type, B isof... 28 3.3
gi|157952213 protein tyrosine phosphatase, receptor type, B isof... 28 3.3
gi|21314764 Fc receptor-like 3 precursor [Homo sapiens] 27 4.3
gi|130980072 CD33 antigen isoform 2 precursor [Homo sapiens] 27 5.6
gi|130979981 CD33 antigen isoform 1 precursor [Homo sapiens] 27 5.6
gi|116812586 leucine zipper protein 5 [Homo sapiens] 27 5.6
gi|110349721 titin isoform novex-3 [Homo sapiens] 27 7.3
gi|110349719 titin isoform N2-A [Homo sapiens] 27 7.3
gi|110349717 titin isoform novex-2 [Homo sapiens] 27 7.3
gi|110349713 titin isoform novex-1 [Homo sapiens] 27 7.3
gi|110349715 titin isoform N2-B [Homo sapiens] 27 7.3
gi|134304851 glutamate receptor, ionotropic, AMPA 2 isoform 3 [H... 26 9.5
gi|74275354 glutamate receptor, ionotropic, AMPA 2 isoform 1 pre... 26 9.5
gi|46487911 zinc finger protein 406 isoform ZFAT-1 [Homo sapiens] 26 9.5
gi|71480169 zinc finger protein 406 isoform TR-ZFAT [Homo sapiens] 26 9.5
gi|57222338 microfibrillar-associated protein 3-like isoform 2 [... 26 9.5
gi|150378549 tangerin [Homo sapiens] 26 9.5
gi|153792329 microfibrillar-associated protein 3-like isoform 1 ... 26 9.5
>gi|15082236 transmembrane protein 10 isoform a [Homo sapiens]
Length = 141
Score = 286 bits (731), Expect = 5e-78
Identities = 141/141 (100%), Positives = 141/141 (100%)
Query: 1 MSFSLNFTLPANTTSSPVTGGKETDCGPSLGLAAGIPLLVATALLVALLFTLIHRRRSSI 60
MSFSLNFTLPANTTSSPVTGGKETDCGPSLGLAAGIPLLVATALLVALLFTLIHRRRSSI
Sbjct: 1 MSFSLNFTLPANTTSSPVTGGKETDCGPSLGLAAGIPLLVATALLVALLFTLIHRRRSSI 60
Query: 61 EAMEESDRPCEISEIDDNPKISENPRRSPTHEKNTMGAQEAHIYVKTVAGSEEPVHDRYR 120
EAMEESDRPCEISEIDDNPKISENPRRSPTHEKNTMGAQEAHIYVKTVAGSEEPVHDRYR
Sbjct: 61 EAMEESDRPCEISEIDDNPKISENPRRSPTHEKNTMGAQEAHIYVKTVAGSEEPVHDRYR 120
Query: 121 PTIEMERRRGLWWLVPRLSLE 141
PTIEMERRRGLWWLVPRLSLE
Sbjct: 121 PTIEMERRRGLWWLVPRLSLE 141
>gi|91932793 transmembrane protein 10 isoform c [Homo sapiens]
Length = 131
Score = 260 bits (665), Expect = 2e-70
Identities = 128/128 (100%), Positives = 128/128 (100%)
Query: 14 TSSPVTGGKETDCGPSLGLAAGIPLLVATALLVALLFTLIHRRRSSIEAMEESDRPCEIS 73
TSSPVTGGKETDCGPSLGLAAGIPLLVATALLVALLFTLIHRRRSSIEAMEESDRPCEIS
Sbjct: 4 TSSPVTGGKETDCGPSLGLAAGIPLLVATALLVALLFTLIHRRRSSIEAMEESDRPCEIS 63
Query: 74 EIDDNPKISENPRRSPTHEKNTMGAQEAHIYVKTVAGSEEPVHDRYRPTIEMERRRGLWW 133
EIDDNPKISENPRRSPTHEKNTMGAQEAHIYVKTVAGSEEPVHDRYRPTIEMERRRGLWW
Sbjct: 64 EIDDNPKISENPRRSPTHEKNTMGAQEAHIYVKTVAGSEEPVHDRYRPTIEMERRRGLWW 123
Query: 134 LVPRLSLE 141
LVPRLSLE
Sbjct: 124 LVPRLSLE 131
>gi|91932795 transmembrane protein 10 isoform b [Homo sapiens]
Length = 118
Score = 239 bits (609), Expect = 7e-64
Identities = 117/117 (100%), Positives = 117/117 (100%)
Query: 25 DCGPSLGLAAGIPLLVATALLVALLFTLIHRRRSSIEAMEESDRPCEISEIDDNPKISEN 84
DCGPSLGLAAGIPLLVATALLVALLFTLIHRRRSSIEAMEESDRPCEISEIDDNPKISEN
Sbjct: 2 DCGPSLGLAAGIPLLVATALLVALLFTLIHRRRSSIEAMEESDRPCEISEIDDNPKISEN 61
Query: 85 PRRSPTHEKNTMGAQEAHIYVKTVAGSEEPVHDRYRPTIEMERRRGLWWLVPRLSLE 141
PRRSPTHEKNTMGAQEAHIYVKTVAGSEEPVHDRYRPTIEMERRRGLWWLVPRLSLE
Sbjct: 62 PRRSPTHEKNTMGAQEAHIYVKTVAGSEEPVHDRYRPTIEMERRRGLWWLVPRLSLE 118
>gi|13376115 adipocyte-specific adhesion molecule [Homo sapiens]
Length = 373
Score = 36.6 bits (83), Expect = 0.007
Identities = 24/53 (45%), Positives = 33/53 (62%), Gaps = 2/53 (3%)
Query: 29 SLGLAAG-IPLLVATALLVALLFTLIHRRRSSIEAMEESDRPCEISEIDDNPK 80
S+G+ AG + +VA ALL+ LL L+ RR+ E EE +RP EI E + PK
Sbjct: 230 SIGMVAGAVTGIVAGALLIFLLVWLLIRRKDK-ERYEEEERPNEIREDAEAPK 281
>gi|11138123 cholinergic receptor, nicotinic, alpha 10 [Homo
sapiens]
Length = 450
Score = 30.0 bits (66), Expect = 0.66
Identities = 28/87 (32%), Positives = 39/87 (44%), Gaps = 7/87 (8%)
Query: 26 CGPSLGLAAGIPLLVATALLVALLFTLIHRRRSSIEAMEESDRPCEISEIDDNPKISENP 85
CGPS+ +P LL L L R R E +S RP E+S +P+ P
Sbjct: 325 CGPSV---RPVPAWARALLLGHLARGLCVRERG--EPCGQS-RPPELSPSPQSPEGGAGP 378
Query: 86 RRSPTHEKNTMGAQEAHI-YVKTVAGS 111
P HE + QEA + +V T+A +
Sbjct: 379 PAGPCHEPRCLCRQEALLHHVATIANT 405
>gi|11641231 ectodysplasin A receptor precursor [Homo sapiens]
Length = 448
Score = 30.0 bits (66), Expect = 0.66
Identities = 24/109 (22%), Positives = 48/109 (44%), Gaps = 20/109 (18%)
Query: 29 SLGLAAGIPLLVATALLVALLFTLIHRRRS-----------SIEAM--------EESDRP 69
+L +A ++A A+++ ++F ++ + S S+EA E D
Sbjct: 187 ALIIAMSTIFIMAIAIVLIIMFYILKTKPSAPACCTSHPGKSVEAQVSKDEEKKEAPDNV 246
Query: 70 CEISEIDDNPKISENPRRSPTHEKNTMGAQEAHIYVKTVAGSEEPVHDR 118
SE D+ K++ P + PT +N ++ + ++V EEP D+
Sbjct: 247 VMFSEKDEFEKLTATPAK-PTKSENDASSENEQLLSRSVDSDEEPAPDK 294
>gi|52630342 major histocompatibility complex, class I, C precursor
[Homo sapiens]
Length = 366
Score = 29.3 bits (64), Expect = 1.1
Identities = 13/32 (40%), Positives = 23/32 (71%)
Query: 28 PSLGLAAGIPLLVATALLVALLFTLIHRRRSS 59
P +G+ AG+ +LV A+L A++ ++ RR+SS
Sbjct: 307 PIMGIVAGLAVLVVLAVLGAVVTAMMCRRKSS 338
>gi|4502263 activating transcription factor 3 isoform 1 [Homo
sapiens]
Length = 181
Score = 29.3 bits (64), Expect = 1.1
Identities = 15/47 (31%), Positives = 24/47 (51%)
Query: 52 LIHRRRSSIEAMEESDRPCEISEIDDNPKISENPRRSPTHEKNTMGA 98
L HR S++E++ SDRP +S E+ R+ E+N + A
Sbjct: 54 LCHRMSSALESVTVSDRPLGVSITKAEVAPEEDERKKRRRERNKIAA 100
>gi|95102483 activating transcription factor 3 isoform 2 [Homo
sapiens]
Length = 135
Score = 29.3 bits (64), Expect = 1.1
Identities = 15/47 (31%), Positives = 24/47 (51%)
Query: 52 LIHRRRSSIEAMEESDRPCEISEIDDNPKISENPRRSPTHEKNTMGA 98
L HR S++E++ SDRP +S E+ R+ E+N + A
Sbjct: 54 LCHRMSSALESVTVSDRPLGVSITKAEVAPEEDERKKRRRERNKIAA 100
>gi|71902536 activating transcription factor 3 isoform 1 [Homo
sapiens]
Length = 181
Score = 29.3 bits (64), Expect = 1.1
Identities = 15/47 (31%), Positives = 24/47 (51%)
Query: 52 LIHRRRSSIEAMEESDRPCEISEIDDNPKISENPRRSPTHEKNTMGA 98
L HR S++E++ SDRP +S E+ R+ E+N + A
Sbjct: 54 LCHRMSSALESVTVSDRPLGVSITKAEVAPEEDERKKRRRERNKIAA 100
>gi|126362953 leukocyte immunoglobulin-like receptor, subfamily B,
member 1 isoform 3 [Homo sapiens]
Length = 651
Score = 29.3 bits (64), Expect = 1.1
Identities = 22/66 (33%), Positives = 26/66 (39%), Gaps = 18/66 (27%)
Query: 10 PANTTSSPVTGGKETDCGPS------------------LGLAAGIPLLVATALLVALLFT 51
P+ SSP TG T GP LG+ GI + V LL+ LL
Sbjct: 422 PSGGPSSPTTGPTSTSAGPEDQPLTPTGSDPQSGLGRHLGVVIGILVAVILLLLLLLLLF 481
Query: 52 LIHRRR 57
LI R R
Sbjct: 482 LILRHR 487
>gi|126362951 leukocyte immunoglobulin-like receptor, subfamily B,
member 1 isoform 2 [Homo sapiens]
Length = 652
Score = 29.3 bits (64), Expect = 1.1
Identities = 22/66 (33%), Positives = 26/66 (39%), Gaps = 18/66 (27%)
Query: 10 PANTTSSPVTGGKETDCGPS------------------LGLAAGIPLLVATALLVALLFT 51
P+ SSP TG T GP LG+ GI + V LL+ LL
Sbjct: 422 PSGGPSSPTTGPTSTSAGPEDQPLTPTGSDPQSGLGRHLGVVIGILVAVILLLLLLLLLF 481
Query: 52 LIHRRR 57
LI R R
Sbjct: 482 LILRHR 487
>gi|157952215 protein tyrosine phosphatase, receptor type, B isoform a
[Homo sapiens]
Length = 2215
Score = 27.7 bits (60), Expect = 3.3
Identities = 23/70 (32%), Positives = 32/70 (45%), Gaps = 11/70 (15%)
Query: 7 FTLPANTTSSPVTGGKETDCGPSLGLAAGIPLLVATALLVALLF---TLIH-RRRSSIEA 62
F+LP T S P+ G E G++AG+ L+ +VALL + H R R S
Sbjct: 1823 FSLPITTESEPLFGAIE-------GVSAGLFLIGMLVAVVALLICRQKVSHGRERPSARL 1875
Query: 63 MEESDRPCEI 72
DRP +
Sbjct: 1876 SIRRDRPLSV 1885
>gi|157952213 protein tyrosine phosphatase, receptor type, B isoform b
precursor [Homo sapiens]
Length = 1997
Score = 27.7 bits (60), Expect = 3.3
Identities = 23/70 (32%), Positives = 32/70 (45%), Gaps = 11/70 (15%)
Query: 7 FTLPANTTSSPVTGGKETDCGPSLGLAAGIPLLVATALLVALLF---TLIH-RRRSSIEA 62
F+LP T S P+ G E G++AG+ L+ +VALL + H R R S
Sbjct: 1605 FSLPITTESEPLFGAIE-------GVSAGLFLIGMLVAVVALLICRQKVSHGRERPSARL 1657
Query: 63 MEESDRPCEI 72
DRP +
Sbjct: 1658 SIRRDRPLSV 1667
>gi|21314764 Fc receptor-like 3 precursor [Homo sapiens]
Length = 734
Score = 27.3 bits (59), Expect = 4.3
Identities = 24/92 (26%), Positives = 38/92 (41%), Gaps = 7/92 (7%)
Query: 33 AAGIPLLVATALLVALLFTLIH-----RRRSSIEAMEESDR-PCEISEIDDNPKISENPR 86
AAGI LV + L++A L+H R+ + A S P E E + +P+
Sbjct: 574 AAGITGLVLSILVLAAAAALLHYARARRKPGGLSATGTSSHSPSECQEPSSSRPSRIDPQ 633
Query: 87 RSPTHEKNTMGAQEAHIYVKTVAGSEEPVHDR 118
PTH K + +Y G P++ +
Sbjct: 634 E-PTHSKPLAPMELEPMYSNVNPGDSNPIYSQ 664
>gi|130980072 CD33 antigen isoform 2 precursor [Homo sapiens]
Length = 237
Score = 26.9 bits (58), Expect = 5.6
Identities = 21/73 (28%), Positives = 36/73 (49%), Gaps = 7/73 (9%)
Query: 2 SFSLNFT-LPANTTSSPV----TGGKETDCGPSLGLAAGIPLLVATALLVALLFTLI--H 54
+ LN T +P N T+ +G +ET G G G + AL + L+F ++ H
Sbjct: 99 TIQLNVTYVPQNPTTGIFPGDGSGKQETRAGVVHGAIGGAGVTALLALCLCLIFFIVKTH 158
Query: 55 RRRSSIEAMEESD 67
RR+++ A+ +D
Sbjct: 159 RRKAARTAVGRND 171
>gi|130979981 CD33 antigen isoform 1 precursor [Homo sapiens]
Length = 364
Score = 26.9 bits (58), Expect = 5.6
Identities = 21/73 (28%), Positives = 36/73 (49%), Gaps = 7/73 (9%)
Query: 2 SFSLNFT-LPANTTSSPV----TGGKETDCGPSLGLAAGIPLLVATALLVALLFTLI--H 54
+ LN T +P N T+ +G +ET G G G + AL + L+F ++ H
Sbjct: 226 TIQLNVTYVPQNPTTGIFPGDGSGKQETRAGVVHGAIGGAGVTALLALCLCLIFFIVKTH 285
Query: 55 RRRSSIEAMEESD 67
RR+++ A+ +D
Sbjct: 286 RRKAARTAVGRND 298
>gi|116812586 leucine zipper protein 5 [Homo sapiens]
Length = 1143
Score = 26.9 bits (58), Expect = 5.6
Identities = 14/39 (35%), Positives = 18/39 (46%)
Query: 85 PRRSPTHEKNTMGAQEAHIYVKTVAGSEEPVHDRYRPTI 123
PRRSP H K H K G EE ++ Y+P +
Sbjct: 297 PRRSPVHSKVREVLSYFHHQKKVRQGVEEMLYRLYKPIL 335
>gi|110349721 titin isoform novex-3 [Homo sapiens]
Length = 5604
Score = 26.6 bits (57), Expect = 7.3
Identities = 19/67 (28%), Positives = 33/67 (49%), Gaps = 8/67 (11%)
Query: 71 EISEIDDNPKISENPRRSPTHEKNTMG-AQEAHIYVKTVAGSEEPVHDRYRPTIEMERRR 129
E+S + PKI E + T+G +AH V+ V G +P + Y+ +++ER
Sbjct: 2070 ELSPSMEAPKIFERI------QSQTVGQGSDAHFRVRVV-GKPDPECEWYKNGVKIERSD 2122
Query: 130 GLWWLVP 136
++W P
Sbjct: 2123 RIYWYWP 2129
>gi|110349719 titin isoform N2-A [Homo sapiens]
Length = 33423
Score = 26.6 bits (57), Expect = 7.3
Identities = 19/67 (28%), Positives = 33/67 (49%), Gaps = 8/67 (11%)
Query: 71 EISEIDDNPKISENPRRSPTHEKNTMG-AQEAHIYVKTVAGSEEPVHDRYRPTIEMERRR 129
E+S + PKI E + T+G +AH V+ V G +P + Y+ +++ER
Sbjct: 2070 ELSPSMEAPKIFERI------QSQTVGQGSDAHFRVRVV-GKPDPECEWYKNGVKIERSD 2122
Query: 130 GLWWLVP 136
++W P
Sbjct: 2123 RIYWYWP 2129
>gi|110349717 titin isoform novex-2 [Homo sapiens]
Length = 27118
Score = 26.6 bits (57), Expect = 7.3
Identities = 19/67 (28%), Positives = 33/67 (49%), Gaps = 8/67 (11%)
Query: 71 EISEIDDNPKISENPRRSPTHEKNTMG-AQEAHIYVKTVAGSEEPVHDRYRPTIEMERRR 129
E+S + PKI E + T+G +AH V+ V G +P + Y+ +++ER
Sbjct: 2024 ELSPSMEAPKIFERI------QSQTVGQGSDAHFRVRVV-GKPDPECEWYKNGVKIERSD 2076
Query: 130 GLWWLVP 136
++W P
Sbjct: 2077 RIYWYWP 2083
>gi|110349713 titin isoform novex-1 [Homo sapiens]
Length = 27051
Score = 26.6 bits (57), Expect = 7.3
Identities = 19/67 (28%), Positives = 33/67 (49%), Gaps = 8/67 (11%)
Query: 71 EISEIDDNPKISENPRRSPTHEKNTMG-AQEAHIYVKTVAGSEEPVHDRYRPTIEMERRR 129
E+S + PKI E + T+G +AH V+ V G +P + Y+ +++ER
Sbjct: 2024 ELSPSMEAPKIFERI------QSQTVGQGSDAHFRVRVV-GKPDPECEWYKNGVKIERSD 2076
Query: 130 GLWWLVP 136
++W P
Sbjct: 2077 RIYWYWP 2083
>gi|110349715 titin isoform N2-B [Homo sapiens]
Length = 26926
Score = 26.6 bits (57), Expect = 7.3
Identities = 19/67 (28%), Positives = 33/67 (49%), Gaps = 8/67 (11%)
Query: 71 EISEIDDNPKISENPRRSPTHEKNTMG-AQEAHIYVKTVAGSEEPVHDRYRPTIEMERRR 129
E+S + PKI E + T+G +AH V+ V G +P + Y+ +++ER
Sbjct: 2024 ELSPSMEAPKIFERI------QSQTVGQGSDAHFRVRVV-GKPDPECEWYKNGVKIERSD 2076
Query: 130 GLWWLVP 136
++W P
Sbjct: 2077 RIYWYWP 2083
>gi|134304851 glutamate receptor, ionotropic, AMPA 2 isoform 3 [Homo
sapiens]
Length = 836
Score = 26.2 bits (56), Expect = 9.5
Identities = 23/90 (25%), Positives = 41/90 (45%), Gaps = 10/90 (11%)
Query: 19 TGGKETDCGPSLGLAAGIPLLVATALLVALLFTLI---HRRRSSIEAMEESDRPCEISEI 75
+G KE SL AG+ ++ L +A+L LI ++ R+ + M+ + I
Sbjct: 752 SGSKEKTSALSLSNVAGVFYILVGGLGLAMLVALIEFCYKSRAEAKRMKVAKNAQNI--- 808
Query: 76 DDNPKISENPRRSPTHEK--NTMGAQEAHI 103
NP S+N + T+++ N G + I
Sbjct: 809 --NPSSSQNSQNFATYKEGYNVYGIESVKI 836
>gi|74275354 glutamate receptor, ionotropic, AMPA 2 isoform 1
precursor [Homo sapiens]
Length = 883
Score = 26.2 bits (56), Expect = 9.5
Identities = 23/90 (25%), Positives = 41/90 (45%), Gaps = 10/90 (11%)
Query: 19 TGGKETDCGPSLGLAAGIPLLVATALLVALLFTLI---HRRRSSIEAMEESDRPCEISEI 75
+G KE SL AG+ ++ L +A+L LI ++ R+ + M+ + I
Sbjct: 799 SGSKEKTSALSLSNVAGVFYILVGGLGLAMLVALIEFCYKSRAEAKRMKVAKNAQNI--- 855
Query: 76 DDNPKISENPRRSPTHEK--NTMGAQEAHI 103
NP S+N + T+++ N G + I
Sbjct: 856 --NPSSSQNSQNFATYKEGYNVYGIESVKI 883
>gi|46487911 zinc finger protein 406 isoform ZFAT-1 [Homo sapiens]
Length = 1243
Score = 26.2 bits (56), Expect = 9.5
Identities = 17/56 (30%), Positives = 29/56 (51%), Gaps = 5/56 (8%)
Query: 61 EAMEESDRPCEIS-EIDDNPKISENPRRSPTHEKNTMGAQEAHIYVKTVAGSEEPV 115
EA ESD E + DD K S+ PR T + + +EA + ++G+++P+
Sbjct: 148 EAGNESDLELEKKCKEDDREKASKRPRSQKTEKVQKISGKEA----RQLSGAKKPI 199
>gi|71480169 zinc finger protein 406 isoform TR-ZFAT [Homo sapiens]
Length = 846
Score = 26.2 bits (56), Expect = 9.5
Identities = 17/56 (30%), Positives = 29/56 (51%), Gaps = 5/56 (8%)
Query: 61 EAMEESDRPCEIS-EIDDNPKISENPRRSPTHEKNTMGAQEAHIYVKTVAGSEEPV 115
EA ESD E + DD K S+ PR T + + +EA + ++G+++P+
Sbjct: 136 EAGNESDLELEKKCKEDDREKASKRPRSQKTEKVQKISGKEA----RQLSGAKKPI 187
>gi|57222338 microfibrillar-associated protein 3-like isoform 2
[Homo sapiens]
Length = 306
Score = 26.2 bits (56), Expect = 9.5
Identities = 14/46 (30%), Positives = 21/46 (45%)
Query: 58 SSIEAMEESDRPCEISEIDDNPKISENPRRSPTHEKNTMGAQEAHI 103
+S E E P E+ + P E + TH+KNT E+H+
Sbjct: 261 TSTELTSEEPTPVEVPDKVLPPAYLEATEPAVTHDKNTCIIYESHV 306
>gi|150378549 tangerin [Homo sapiens]
Length = 1523
Score = 26.2 bits (56), Expect = 9.5
Identities = 27/105 (25%), Positives = 41/105 (39%), Gaps = 14/105 (13%)
Query: 16 SPVTGGKETDCGPSLGLAAGIPLLVATALLVALLFTLIHRRRSSIEAMEESDRPCEISEI 75
S V G +ET+ G S GI A +L T R++ I E + S +
Sbjct: 836 SEVAGAQETEVGGS-----GISGPEAGMAEARVLMT----RKTEIIVPEAEKEEAQTSGV 886
Query: 76 DD-----NPKISENPRRSPTHEKNTMGAQEAHIYVKTVAGSEEPV 115
+ + R+P + +G+QEA + V GSE V
Sbjct: 887 QEAETRVGSALKYEALRAPVTQPRVLGSQEAKAEISGVQGSETQV 931
>gi|153792329 microfibrillar-associated protein 3-like isoform 1
[Homo sapiens]
Length = 409
Score = 26.2 bits (56), Expect = 9.5
Identities = 14/46 (30%), Positives = 21/46 (45%)
Query: 58 SSIEAMEESDRPCEISEIDDNPKISENPRRSPTHEKNTMGAQEAHI 103
+S E E P E+ + P E + TH+KNT E+H+
Sbjct: 364 TSTELTSEEPTPVEVPDKVLPPAYLEATEPAVTHDKNTCIIYESHV 409
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.316 0.132 0.389
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,545,895
Number of Sequences: 37866
Number of extensions: 226417
Number of successful extensions: 812
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 19
Number of HSP's that attempted gapping in prelim test: 786
Number of HSP's gapped (non-prelim): 45
length of query: 141
length of database: 18,247,518
effective HSP length: 92
effective length of query: 49
effective length of database: 14,763,846
effective search space: 723428454
effective search space used: 723428454
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 56 (26.2 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.