OPALIN 5104

Name: OPALIN	Sequence: fasta or formatted (141aa)		NCBI GI: 15082236
Description: transmembrane protein 10 isoform a		Not currently referenced in the text
Other entries for this name: alt prot {131aa} transmembrane protein 10 isoform c alt prot {118aa} transmembrane protein 10 isoform b
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.1 10 2 C cysteine 1.4 2 1 D aspartate 3.5 5 2 E glutamate 9.9 14 2 F phenylalanine 2.1 3 1 G glycine 5.7 8 2 H histidine 2.8 4 1 I isoleucine 5.7 8 1 K lysine 2.8 4 1 L leucine 10.6 15 2 M methionine 2.8 4 1 N asparagine 3.5 5 1 P proline 7.8 11 1 Q glutamine 0.7 1 1 R arginine 8.5 12 3 S serine 9.2 13 2 T threonine 7.8 11 2 V valine 5.0 7 1 W tryptophan 1.4 2 2 Y tyrosine 1.4 2 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 transmembrane protein 10 isoform a OPALIN 0.900 transmembrane protein 10 isoform c OPALIN 0.820 transmembrane protein 10 isoform b ASAM 0.046 adipocyte-specific adhesion molecule CHRNA10 0.019 cholinergic receptor, nicotinic, alpha 10 EDAR 0.019 ectodysplasin A receptor precursor HLA-C 0.015 major histocompatibility complex, class I, C precurs... ATF3 0.015 activating transcription factor 3 isoform 1 ATF3 0.015 activating transcription factor 3 isoform 2 ATF3 0.015 activating transcription factor 3 isoform 1 LILRB1 0.015 leukocyte immunoglobulin-like receptor, subfamily B... LILRB1 0.015 leukocyte immunoglobulin-like receptor, subfamily B... PTPRB 0.011 protein tyrosine phosphatase, receptor type, B isof... PTPRB 0.011 protein tyrosine phosphatase, receptor type, B isof... FCRL3 0.008 Fc receptor-like 3 precursor CD33 0.008 CD33 antigen isoform 2 precursor CD33 0.008 CD33 antigen isoform 1 precursor NCAPG2 0.008 leucine zipper protein 5 TTN 0.008 titin isoform novex-3 TTN 0.008 titin isoform N2-A TTN 0.008 titin isoform novex-2 TTN 0.008 titin isoform novex-1 TTN 0.008 titin isoform N2-B GRIA2 0.004 glutamate receptor, ionotropic, AMPA 2 isoform 3 [H... GRIA2 0.004 glutamate receptor, ionotropic, AMPA 2 isoform 1 pre... ZFAT 0.004 zinc finger protein 406 isoform ZFAT-1 ZFAT 0.004 zinc finger protein 406 isoform TR-ZFAT MFAP3L 0.004 microfibrillar-associated protein 3-like isoform 2 [... EHBP1L1 0.004 tangerin MFAP3L 0.004 microfibrillar-associated protein 3-like isoform 1 ... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.