Guide to the Human Genome
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Name: LOC100131031 Sequence: fasta or formatted (252aa) NCBI GI: 169168964
Description:

PREDICTED: hypothetical protein LOC100131031

Not currently referenced in the text

Other entries for this name:
alt mRNA {252aa} PREDICTED: hypothetical protein LOC100131031
alt mRNA {252aa} PREDICTED: hypothetical protein LOC100131031
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.3         16           3
 C cysteine            2.0          5           1
 D aspartate           4.8         12           2
 E glutamate          13.5         34           3
 F phenylalanine       0.4          1           1
 G glycine             1.6          4           1
 H histidine           2.4          6           2
 I isoleucine          3.6          9           2
 K lysine             11.9         30           2
 L leucine            10.7         27           3
 M methionine          2.8          7           1
 N asparagine          6.7         17           2
 P proline             2.4          6           1
 Q glutamine           7.1         18           2
 R arginine            3.2          8           1
 S serine              5.2         13           1
 T threonine           6.7         17           1
 V valine              7.1         18           2
 W tryptophan          0.0          0           0
 Y tyrosine            1.6          4           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   PREDICTED: hypothetical protein LOC100131031 
LOC100131031          1.000   PREDICTED: hypothetical protein LOC100131031 
LOC100131031          1.000   PREDICTED: hypothetical protein LOC100131031 
ANKRD18A              0.252   PREDICTED: ankyrin repeat domain 18A 
ANKRD18A              0.252   PREDICTED: ankyrin repeat domain 18A 
ANKRD18A              0.252   PREDICTED: ankyrin repeat domain 18A 
ANKRD18B              0.235   PREDICTED: ankyrin repeat domain 18B 
ANKRD18B              0.235   PREDICTED: ankyrin repeat domain 18B 
ANKRD18B              0.235   PREDICTED: ankyrin repeat domain 18B 
ANKRD26               0.224   ankyrin repeat domain 26 
ANKRD20A4             0.201   ankyrin repeat domain 20 family, member A4 
ANKRD20A2             0.197   ankyrin repeat domain 20 family, member A2 
ANKRD20A1             0.197   ankyrin repeat domain 20 family, member A1 
ANKRD62               0.197   PREDICTED: ankyrin repeat domain 62 
ANKRD62               0.197   PREDICTED: ankyrin repeat domain 62 isoform 4 [Homo...
ANKRD20A5             0.194   PREDICTED: ankyrin repeat domain 20 family, member ...
ANKRD20A5             0.194   PREDICTED: ankyrin repeat domain 20 family, member ...
ANKRD62               0.192   PREDICTED: ankyrin repeat domain 62 isoform 1 [Homo...
ANKRD20A3             0.190   ankyrin repeat domain 20 family, member A3 
CCDC144A              0.184   coiled-coil domain containing 144A 
ANKRD30B              0.182   ankyrin repeat domain 30B 
ANKRD36               0.179   PREDICTED: ankyrin repeat domain 36 
LOC730658             0.177   PREDICTED: similar to UPF0634 protein KIAA1641 [Hom...
ANKRD36B              0.173   ankyrin repeat domain 36B 
LOC400986             0.165   PREDICTED: protein immuno-reactive with anti-PTH po...
LOC400986             0.165   PREDICTED: protein immuno-reactive with anti-PTH po...
ANKRD30A              0.162   ankyrin repeat domain 30A 
POTEA                 0.147   POTE ankyrin domain family, member A isoform 1 [Homo...
FLJ46358              0.128   PREDICTED: FLJ46358 protein 
FLJ46358              0.128   PREDICTED: FLJ46358 protein 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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