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Search of human proteins with 150170725
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|150170725 zinc and ring finger 4 [Homo sapiens]
(429 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|150170725 zinc and ring finger 4 [Homo sapiens] 893 0.0
gi|14149702 ring finger protein 167 [Homo sapiens] 222 6e-58
gi|34577087 ring finger protein 13 [Homo sapiens] 214 1e-55
gi|6005864 ring finger protein 13 [Homo sapiens] 214 1e-55
gi|29788758 ring finger protein 130 [Homo sapiens] 74 3e-13
gi|37675277 ring finger protein 148 [Homo sapiens] 72 1e-12
gi|58331204 ring finger protein 150 [Homo sapiens] 69 8e-12
gi|21040269 ring finger protein 133 [Homo sapiens] 69 1e-11
gi|29789407 ring finger protein 149 [Homo sapiens] 67 4e-11
gi|56711322 ring finger protein 43 [Homo sapiens] 65 1e-10
gi|34452686 ring finger protein, LIM domain interacting [Homo sa... 64 2e-10
gi|34452684 ring finger protein, LIM domain interacting [Homo sa... 64 2e-10
gi|150378447 zinc and ring finger 3 [Homo sapiens] 63 4e-10
gi|37588871 ring finger protein 128 isoform 2 [Homo sapiens] 62 1e-09
gi|37588873 ring finger protein 128 isoform 1 [Homo sapiens] 61 2e-09
gi|37622894 ring finger protein 126 [Homo sapiens] 57 3e-08
gi|5174653 ring finger protein 6 [Homo sapiens] 57 4e-08
gi|34305295 ring finger protein 6 [Homo sapiens] 57 4e-08
gi|34305293 ring finger protein 6 [Homo sapiens] 57 4e-08
gi|37577185 ring finger protein 38 isoform 2 [Homo sapiens] 56 7e-08
gi|37577181 ring finger protein 38 isoform 2 [Homo sapiens] 56 7e-08
gi|37577179 ring finger protein 38 isoform 3 [Homo sapiens] 56 7e-08
gi|37577177 ring finger protein 38 isoform 2 [Homo sapiens] 56 7e-08
gi|37577175 ring finger protein 38 isoform 1 [Homo sapiens] 56 7e-08
gi|7662486 ring finger protein 44 [Homo sapiens] 55 9e-08
gi|197245452 ring finger protein 24 isoform 2 [Homo sapiens] 55 1e-07
gi|197245450 ring finger protein 24 isoform 1 [Homo sapiens] 55 1e-07
gi|6857791 ring finger protein 24 isoform 1 [Homo sapiens] 55 1e-07
gi|63025220 ring finger protein 215 [Homo sapiens] 55 1e-07
gi|38045931 ring finger protein 122 [Homo sapiens] 55 2e-07
>gi|150170725 zinc and ring finger 4 [Homo sapiens]
Length = 429
Score = 893 bits (2308), Expect = 0.0
Identities = 429/429 (100%), Positives = 429/429 (100%)
Query: 1 MPLCRPEHLMPRASRVPVAASLPLSHAVIPTQLPSRPGHRPPGRPRRCPKASCLPPPVGP 60
MPLCRPEHLMPRASRVPVAASLPLSHAVIPTQLPSRPGHRPPGRPRRCPKASCLPPPVGP
Sbjct: 1 MPLCRPEHLMPRASRVPVAASLPLSHAVIPTQLPSRPGHRPPGRPRRCPKASCLPPPVGP 60
Query: 61 SSTQTAKRVTMGWPRPGRALVAVKALLVLSLLQVPAQAVVRAVLEDNSSSVDFADLPALF 120
SSTQTAKRVTMGWPRPGRALVAVKALLVLSLLQVPAQAVVRAVLEDNSSSVDFADLPALF
Sbjct: 61 SSTQTAKRVTMGWPRPGRALVAVKALLVLSLLQVPAQAVVRAVLEDNSSSVDFADLPALF 120
Query: 121 GVPLAPEGIRGYLMEVKPANACHPIEAPRLGNRSLGAIVLIRRYDCTFDLKVLNAQRAGF 180
GVPLAPEGIRGYLMEVKPANACHPIEAPRLGNRSLGAIVLIRRYDCTFDLKVLNAQRAGF
Sbjct: 121 GVPLAPEGIRGYLMEVKPANACHPIEAPRLGNRSLGAIVLIRRYDCTFDLKVLNAQRAGF 180
Query: 181 EAAIVHNVHSDDLVSMTHVYEDLRGQIAIPSVFVSEAASQDLRVILGCNKSAHALLLPDD 240
EAAIVHNVHSDDLVSMTHVYEDLRGQIAIPSVFVSEAASQDLRVILGCNKSAHALLLPDD
Sbjct: 181 EAAIVHNVHSDDLVSMTHVYEDLRGQIAIPSVFVSEAASQDLRVILGCNKSAHALLLPDD 240
Query: 241 PPCHDLGCHPVLTVSWVLGCTLALVVSAFFVLNHLWLWAQACCSHRRPVKTSTCQKAQVR 300
PPCHDLGCHPVLTVSWVLGCTLALVVSAFFVLNHLWLWAQACCSHRRPVKTSTCQKAQVR
Sbjct: 241 PPCHDLGCHPVLTVSWVLGCTLALVVSAFFVLNHLWLWAQACCSHRRPVKTSTCQKAQVR 300
Query: 301 TFTWHNDLCAICLDEYEEGDQLKILPCSHTYHCKCIDPWFSQAPRRSCPVCKQSVAATED 360
TFTWHNDLCAICLDEYEEGDQLKILPCSHTYHCKCIDPWFSQAPRRSCPVCKQSVAATED
Sbjct: 301 TFTWHNDLCAICLDEYEEGDQLKILPCSHTYHCKCIDPWFSQAPRRSCPVCKQSVAATED 360
Query: 361 SFDSTTYSFRDEDPSLPGHRPPIWAIQVQLRSRRLELLGRASPHCHCSTTSLEAEYTTVS 420
SFDSTTYSFRDEDPSLPGHRPPIWAIQVQLRSRRLELLGRASPHCHCSTTSLEAEYTTVS
Sbjct: 361 SFDSTTYSFRDEDPSLPGHRPPIWAIQVQLRSRRLELLGRASPHCHCSTTSLEAEYTTVS 420
Query: 421 SAPPEAPGQ 429
SAPPEAPGQ
Sbjct: 421 SAPPEAPGQ 429
>gi|14149702 ring finger protein 167 [Homo sapiens]
Length = 350
Score = 222 bits (565), Expect = 6e-58
Identities = 132/345 (38%), Positives = 201/345 (58%), Gaps = 43/345 (12%)
Query: 95 PAQAVVRAVLEDNSSSVDFADLPALFGVPLAPEGIRGYLMEVKPANACHPIEAPRLG--N 152
P + ++RA D+++S+DFADLPALFG L+ EG++G+L+E P NAC PI P N
Sbjct: 21 PTRGLIRAT-SDHNASMDFADLPALFGATLSQEGLQGFLVEAHPDNACSPIAPPPPAPVN 79
Query: 153 RSLGAIVLIRRYDCTFDLKVLNAQRAGFEAAIVHNVHSDDLVSMTHVYEDLRGQIAIPSV 212
S+ I L+RR+DC FDLKVLNAQ+AG+ AA+VHNV+S++L++M E+++ QI IPSV
Sbjct: 80 GSV-FIALLRRFDCNFDLKVLNAQKAGYGAAVVHNVNSNELLNMVWNSEEIQQQIWIPSV 138
Query: 213 FVSEAASQDLRVILGCNKSAHALLLPDDPPCHDLGCHPVLTVSWVLGCTLALVVSAFFVL 272
F+ E +S+ LR + K A LL+PD+ LG + ++ + ++G L L + A +
Sbjct: 139 FIGERSSEYLRALFVYEKGARVLLVPDN--TFPLGYY-LIPFTGIVG-LLVLAMGAVMIA 194
Query: 273 NHLWLWAQACCSHRRPVKTSTCQKAQVRTFTWHN-------DLCAICLDEYEEGDQLKIL 325
C HR+ ++ + K Q++ H+ D+CAICLDEYE+GD+L++L
Sbjct: 195 R--------CIQHRKRLQRNRLTKEQLKQIPTHDYQKGDQYDVCAICLDEYEDGDKLRVL 246
Query: 326 PCSHTYHCKCIDPWFSQAPRRSCPVCKQSV--AATEDSFDSTTYSFRDEDPSLPGHRPPI 383
PC+H YH +C+DPW +Q R++CP+CKQ V ++ + T + D P P
Sbjct: 247 PCAHAYHSRCVDPWLTQT-RKTCPICKQPVHRGPGDEDQEEETQGQEEGDEGEPRDHP-- 303
Query: 384 WAIQVQLRSRRLELLGRASPHCHCSTTSLEAEYTTVSSAPPEAPG 428
S R LLG S+ +L + +++ AP PG
Sbjct: 304 -------ASERTPLLG--------SSPTLPTSFGSLAPAPLVFPG 333
>gi|34577087 ring finger protein 13 [Homo sapiens]
Length = 381
Score = 214 bits (545), Expect = 1e-55
Identities = 129/321 (40%), Positives = 188/321 (58%), Gaps = 28/321 (8%)
Query: 80 LVAVKALLVLSLLQVPAQAVVRAVLEDNSSSVDFADLPALFGVPLAPEGIRGYLMEVKPA 139
++ V+ L+LL P +A + A +N+S F DLPA FG L EG++G+L+ KP
Sbjct: 18 ILTVQLFAFLNLL--PVEADILAYNFENASQT-FDDLPARFGYRLPAEGLKGFLINSKPE 74
Query: 140 NACHPIEAPRLGNRSLGA-IVLIRRYDCTFDLKVLNAQRAGFEAAIVHNVHSDDLVSMTH 198
NAC PI P + + S G IVLIRR DC FD+KVLNAQRAG++AAIVHNV SDDL+SM
Sbjct: 75 NACEPIVPPPVKDNSSGTFIVLIRRLDCNFDIKVLNAQRAGYKAAIVHNVDSDDLISMGS 134
Query: 199 VYEDLRGQIAIPSVFVSEAASQDLRVILGCNKSAHALLLPDDPPCHDLGCHPVLTVSWVL 258
++ +I IPSVF+ E+++ L+ K H +L+P+ + P L ++
Sbjct: 135 NDIEVLKKIDIPSVFIGESSANSLKDEFTYEKGGHLILVPEFSLPLEYYLIPFLI---IV 191
Query: 259 GCTLALVVSAFFVLNHLWLWAQACCSHRRPVKTSTCQKAQVRTFTWHN-------DLCAI 311
G L L+V F++ R + + +K Q++ H D+CAI
Sbjct: 192 GICLILIV--IFMITKF-------VQDRHRARRNRLRKDQLKKLPVHKFKKGDEYDVCAI 242
Query: 312 CLDEYEEGDQLKILPCSHTYHCKCIDPWFSQAPRRSCPVCKQSVAATEDSFDSTTYSFRD 371
CLDEYE+GD+L+ILPCSH YHCKC+DPW ++ +++CPVCKQ V ++ DS T S ++
Sbjct: 243 CLDEYEDGDKLRILPCSHAYHCKCVDPWLTKT-KKTCPVCKQKVVPSQGDSDSDTDSSQE 301
Query: 372 EDPSLPGHRP---PIWAIQVQ 389
E+ + H P P+ ++ Q
Sbjct: 302 EN-EVTEHTPLLRPLASVSAQ 321
>gi|6005864 ring finger protein 13 [Homo sapiens]
Length = 381
Score = 214 bits (545), Expect = 1e-55
Identities = 129/321 (40%), Positives = 188/321 (58%), Gaps = 28/321 (8%)
Query: 80 LVAVKALLVLSLLQVPAQAVVRAVLEDNSSSVDFADLPALFGVPLAPEGIRGYLMEVKPA 139
++ V+ L+LL P +A + A +N+S F DLPA FG L EG++G+L+ KP
Sbjct: 18 ILTVQLFAFLNLL--PVEADILAYNFENASQT-FDDLPARFGYRLPAEGLKGFLINSKPE 74
Query: 140 NACHPIEAPRLGNRSLGA-IVLIRRYDCTFDLKVLNAQRAGFEAAIVHNVHSDDLVSMTH 198
NAC PI P + + S G IVLIRR DC FD+KVLNAQRAG++AAIVHNV SDDL+SM
Sbjct: 75 NACEPIVPPPVKDNSSGTFIVLIRRLDCNFDIKVLNAQRAGYKAAIVHNVDSDDLISMGS 134
Query: 199 VYEDLRGQIAIPSVFVSEAASQDLRVILGCNKSAHALLLPDDPPCHDLGCHPVLTVSWVL 258
++ +I IPSVF+ E+++ L+ K H +L+P+ + P L ++
Sbjct: 135 NDIEVLKKIDIPSVFIGESSANSLKDEFTYEKGGHLILVPEFSLPLEYYLIPFLI---IV 191
Query: 259 GCTLALVVSAFFVLNHLWLWAQACCSHRRPVKTSTCQKAQVRTFTWHN-------DLCAI 311
G L L+V F++ R + + +K Q++ H D+CAI
Sbjct: 192 GICLILIV--IFMITKF-------VQDRHRARRNRLRKDQLKKLPVHKFKKGDEYDVCAI 242
Query: 312 CLDEYEEGDQLKILPCSHTYHCKCIDPWFSQAPRRSCPVCKQSVAATEDSFDSTTYSFRD 371
CLDEYE+GD+L+ILPCSH YHCKC+DPW ++ +++CPVCKQ V ++ DS T S ++
Sbjct: 243 CLDEYEDGDKLRILPCSHAYHCKCVDPWLTKT-KKTCPVCKQKVVPSQGDSDSDTDSSQE 301
Query: 372 EDPSLPGHRP---PIWAIQVQ 389
E+ + H P P+ ++ Q
Sbjct: 302 EN-EVTEHTPLLRPLASVSAQ 321
>gi|29788758 ring finger protein 130 [Homo sapiens]
Length = 419
Score = 73.9 bits (180), Expect = 3e-13
Identities = 53/214 (24%), Positives = 96/214 (44%), Gaps = 26/214 (12%)
Query: 158 IVLIRRYDCTFDLKVLNAQRAGFEAAIVHNVHS-DDLVSMTHVYEDLRGQIAIPSVFVSE 216
I L++R +CTF K+ A A +++N S ++ V+MTH G I +V ++E
Sbjct: 105 IALLQRGNCTFKEKISRAAFHNAVAVVIYNNKSKEEPVTMTHP-----GTGDIIAVMITE 159
Query: 217 AASQDLRVILGCNKSAHALLLPDD---PPCHDLGCHPVLTVSWVLGCTLALVVSAFFVLN 273
+D+ L N S + P G +++S+++ L ++ SA+ +
Sbjct: 160 LRGKDILSYLEKNISVQMTIAVGTRMPPKNFSRGSLVFVSISFIV---LMIISSAWLIFY 216
Query: 274 HLWLWAQACCSHRRPVKTSTCQKAQVRTFTWHN------------DLCAICLDEYEEGDQ 321
+ R + K + T D CA+C++ Y++ D
Sbjct: 217 FIQKIRYTNARDRNQRRLGDAAKKAISKLTTRTVKKGDKETDPDFDHCAVCIESYKQNDV 276
Query: 322 LKILPCSHTYHCKCIDPWFSQAPRRSCPVCKQSV 355
++ILPC H +H C+DPW S+ +CP+CK ++
Sbjct: 277 VRILPCKHVFHKSCVDPWLSE--HCTCPMCKLNI 308
>gi|37675277 ring finger protein 148 [Homo sapiens]
Length = 305
Score = 71.6 bits (174), Expect = 1e-12
Identities = 64/260 (24%), Positives = 105/260 (40%), Gaps = 39/260 (15%)
Query: 116 LPALFGVPLAPEGIRGYLMEVKPANACHPIEAPRLGNRSLGAIVLIRRYDCTFDLKVLNA 175
L + GV PEG NACHP+ ++ + LI R CTF K+ A
Sbjct: 68 LERVSGVVALPEGWN--------QNACHPLTNFSRPKQADSWLALIERGGCTFTHKINVA 119
Query: 176 QRAGFEAAIVHNVHS--DDLVSMTHVYEDLRGQIAIPSVFVSEAASQDLRVILGCNKSAH 233
G I++N + M+H +G I +V +S + + ++ K +
Sbjct: 120 AEKGANGVIIYNYQGTGSKVFPMSH-----QGTENIVAVMISNL--KGMEILHSIQKGVY 172
Query: 234 ALLLPDDPPCH-DLGCHPVLTVSWVLGCTLALVVSAFFVLNHLWLWA----QACCSHRRP 288
++ + H H ++ + L T+A +F L+ +W + R
Sbjct: 173 VTVIIEVGRMHMQWVSHYIMYLFTFLAATIA-----YFYLDCVWRLTPRVPNSFTRRRSQ 227
Query: 289 VKTST---CQKAQVRTFT-------WHNDLCAICLDEYEEGDQLKILPCSHTYHCKCIDP 338
+KT + Q+R + D C +C D Y+ D ++IL C H +H CIDP
Sbjct: 228 IKTDVKKAIDQLQLRVLKEGDEELDLNEDNCVVCFDTYKPQDVVRILTCKHFFHKACIDP 287
Query: 339 WFSQAPRRSCPVCKQSVAAT 358
W R+CP+CK + T
Sbjct: 288 WL--LAHRTCPMCKCDILKT 305
>gi|58331204 ring finger protein 150 [Homo sapiens]
Length = 438
Score = 68.9 bits (167), Expect = 8e-12
Identities = 53/229 (23%), Positives = 95/229 (41%), Gaps = 21/229 (9%)
Query: 141 ACHPIEAPRLGNRSLGAIVLIRRYDCTFDLKVLNAQRAGFEAAIVHNVHSD--DLVSMTH 198
AC P R I LI + +CT+ K+ NA A ++ NV S+ + ++M H
Sbjct: 101 ACDPNTKFAAPTRGKNWIALIPKGNCTYRDKIRNAFLQNASAVVIFNVGSNTNETITMPH 160
Query: 199 VYEDLRGQIAIPSVFVSEAASQDLRVILGCNKSAHALLLPDDPPCHDLGCHPVLTVSWVL 258
G I ++ + E +++ +L N + + + +
Sbjct: 161 A-----GVEDIVAIMIPEPKGKEIVSLLERNITVTMYITIGTRNLQKYVSRTSVVFVSIS 215
Query: 259 GCTLALVVSAFFVLNHLWLWAQACCSHRRPVKTSTC-----QKAQVRTFTWHN------- 306
L ++ A+ V ++ + A R + K Q+RT +
Sbjct: 216 FIVLMIISLAWLVFYYIQRFRYANARDRNQRRLGDAAKKAISKLQIRTIKKGDKETESDF 275
Query: 307 DLCAICLDEYEEGDQLKILPCSHTYHCKCIDPWFSQAPRRSCPVCKQSV 355
D CA+C++ Y+ D ++ILPC H +H C+DPW R+CP+CK ++
Sbjct: 276 DNCAVCIEGYKPNDVVRILPCRHLFHKSCVDPWL--LDHRTCPMCKMNI 322
>gi|21040269 ring finger protein 133 [Homo sapiens]
Length = 376
Score = 68.6 bits (166), Expect = 1e-11
Identities = 68/252 (26%), Positives = 103/252 (40%), Gaps = 37/252 (14%)
Query: 116 LPALFGVPLAPEGIRGYLMEVKPANACHPIEAPRLGNRSLGAIVLIRRYDCTFDLKVLNA 175
L + GV + PEG K NAC+P S + LI R CTF K+ A
Sbjct: 68 LKRVAGVIVPPEG--------KIQNACNPNTIFSRSKYSETWLALIERGGCTFTQKIKVA 119
Query: 176 QRAGFEAAIVHNVHS--DDLVSMTH-VYEDLRGQIAIPSVFVSEAASQDLRVILGCNKSA 232
G I++NV + + M H +ED+ V V + + K
Sbjct: 120 TEKGASGVIIYNVPGTGNQVFPMFHQAFEDV--------VVVMIGNLKGTEIFHLIKKGV 171
Query: 233 HALLLPDDPPCHDLGCHPVLTVSWVLGCTLALVVSAFFVLNHLWLWAQACCSHRRPVKTS 292
+ + H + + L VS+V+ T L A+F+ H+ A +RR + +
Sbjct: 172 LITAVVEVGRKHIIWMNHYL-VSFVIVTTATL---AYFIFYHIHRLCLARIQNRRWQRLT 227
Query: 293 T-----CQKAQVRT-------FTWHNDLCAICLDEYEEGDQLKILPCSHTYHCKCIDPWF 340
T + Q+R + D C IC + Y+ D ++IL C H +H CIDPW
Sbjct: 228 TDLQNTFGQLQLRVVKEGDEEINPNGDSCVICFERYKPNDIVRILTCKHFFHKNCIDPWI 287
Query: 341 SQAPRRSCPVCK 352
P +CP+CK
Sbjct: 288 --LPHGTCPICK 297
>gi|29789407 ring finger protein 149 [Homo sapiens]
Length = 400
Score = 66.6 bits (161), Expect = 4e-11
Identities = 78/309 (25%), Positives = 118/309 (38%), Gaps = 57/309 (18%)
Query: 77 GRALVAVKALLVLSLLQVPAQAVVRAVLEDN--SSSVDFADLPALFGVPLAPEGIRGYLM 134
GRAL A++ + + V +V E S L GVP AP G
Sbjct: 32 GRALEWFSAVVNIEYVDPQTNLTVWSVSESGRFGDSSPKEGAHGLVGVPWAPGG------ 85
Query: 135 EVKPANACHP---IEAPRLGNRSLGA-IVLIRRYDCTFDLKVLNAQRAGFEAAIVHNVHS 190
C P P G R + L+ R CTF KVL A R A +++N
Sbjct: 86 ---DLEGCAPDTRFFVPEPGGRGAAPWVALVARGGCTFKDKVLVAARRNASAVVLYN--- 139
Query: 191 DDLVSMTHVYEDLRGQIAIPSVFVSEAASQDLRVILGCNKSAHALL---LPDDPPCHDLG 247
E+ G I +P +S A + ++ VI+ +L P +G
Sbjct: 140 ----------EERYGNITLP---MSHAGTGNIVVIMISYPKGREILELVQKGIPVTMTIG 186
Query: 248 CHPVLTVSWVLGCTLALVVSAFF---VLNHLWL---WAQACC---------SHRRPVKTS 292
++ G ++ V AF +++ WL + Q SHR+ K
Sbjct: 187 VGTRHVQEFISGQSVVFVAIAFITMMIISLAWLIFYYIQRFLYTGSQIGSQSHRKETKKV 246
Query: 293 TCQ------KAQVRTFTWHNDLCAICLDEYEEGDQLKILPCSHTYHCKCIDPWFSQAPRR 346
Q K + + CA+C++ ++ D ++ILPC H +H CIDPW R
Sbjct: 247 IGQLLLHTVKHGEKGIDVDAENCAVCIENFKVKDIIRILPCKHIFHRICIDPWL--LDHR 304
Query: 347 SCPVCKQSV 355
+CP+CK V
Sbjct: 305 TCPMCKLDV 313
>gi|56711322 ring finger protein 43 [Homo sapiens]
Length = 783
Score = 65.1 bits (157), Expect = 1e-10
Identities = 42/130 (32%), Positives = 58/130 (44%), Gaps = 31/130 (23%)
Query: 280 QACCSHRR---PVKTSTCQKAQVRTFTWHNDLCAICLDEYEEGDQLKILPCSHTYHCKCI 336
QA C R P S+C A V CAICL+E+ EG +L+++ C H +H C+
Sbjct: 249 QASCRQARGEWPDSGSSCSSAPV---------CAICLEEFSEGQELRVISCLHEFHRNCV 299
Query: 337 DPWFSQAPRRSCPVCKQSVAATEDSFDSTTYSFRDEDPSLPGHRPPIWAIQVQLRSRRLE 396
DPW Q R+CP+C ++ DSF + PS P RRL
Sbjct: 300 DPWLHQ--HRTCPLCMFNI-TEGDSFSQSL------GPSRSYQEP----------GRRLH 340
Query: 397 LLGRASPHCH 406
L+ + H H
Sbjct: 341 LIRQHPGHAH 350
>gi|34452686 ring finger protein, LIM domain interacting [Homo
sapiens]
Length = 624
Score = 64.3 bits (155), Expect = 2e-10
Identities = 24/50 (48%), Positives = 37/50 (74%), Gaps = 2/50 (4%)
Query: 309 CAICLDEYEEGDQLKILPCSHTYHCKCIDPWFSQAPRRSCPVCKQSVAAT 358
C++C+ EY EG++L+ LPCSH YH CID W S+ +CP+C+++V A+
Sbjct: 570 CSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSE--NSTCPICRRAVLAS 617
>gi|34452684 ring finger protein, LIM domain interacting [Homo
sapiens]
Length = 624
Score = 64.3 bits (155), Expect = 2e-10
Identities = 24/50 (48%), Positives = 37/50 (74%), Gaps = 2/50 (4%)
Query: 309 CAICLDEYEEGDQLKILPCSHTYHCKCIDPWFSQAPRRSCPVCKQSVAAT 358
C++C+ EY EG++L+ LPCSH YH CID W S+ +CP+C+++V A+
Sbjct: 570 CSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSE--NSTCPICRRAVLAS 617
>gi|150378447 zinc and ring finger 3 [Homo sapiens]
Length = 836
Score = 63.2 bits (152), Expect = 4e-10
Identities = 21/47 (44%), Positives = 36/47 (76%), Gaps = 2/47 (4%)
Query: 309 CAICLDEYEEGDQLKILPCSHTYHCKCIDPWFSQAPRRSCPVCKQSV 355
CAICL++Y +G++L+++PC+H +H KC+DPW Q +CP C+ ++
Sbjct: 193 CAICLEKYIDGEELRVIPCTHRFHRKCVDPWLLQ--HHTCPHCRHNI 237
>gi|37588871 ring finger protein 128 isoform 2 [Homo sapiens]
Length = 402
Score = 61.6 bits (148), Expect = 1e-09
Identities = 48/219 (21%), Positives = 94/219 (42%), Gaps = 42/219 (19%)
Query: 158 IVLIRRYDCTFDLKVLNAQRAGFEAAIVHNVHS--DDLVSMTHVYEDLRGQIAIPSVFVS 215
I LI R +CTF K+ A R +A +++N + + M + G + I ++ +
Sbjct: 92 IALIERGNCTFSEKIQTAGRRNADAVVIYNAPETGNQTIQMANF-----GAVDIVAIMIG 146
Query: 216 EAASQDLRVILGCNKSAHALLLPDDPPCHDLGCHPVLTVSWVLGCTLALVVSAFFVLNHL 275
+ +++ + ++ + H WV ++ V +FF++
Sbjct: 147 NL--KGTKILQSIQRGIQVTMVIEVGKKHG---------PWVNHYSIFFVSVSFFIITAA 195
Query: 276 WLW------------AQACCSHRRPVKTSTCQ---KAQVRTFTWHN-------DLCAICL 313
+ A+A +R +K + + Q+RT + D CA+C+
Sbjct: 196 TVGYFIFYSARRLRNARAQSRKQRQLKADAKKAIGRLQLRTLKQGDKEIGPDGDSCAVCI 255
Query: 314 DEYEEGDQLKILPCSHTYHCKCIDPWFSQAPRRSCPVCK 352
+ Y+ D ++IL C+H +H C+DPW + R+CP+CK
Sbjct: 256 ELYKPNDLVRILTCNHIFHKTCVDPWLLE--HRTCPMCK 292
>gi|37588873 ring finger protein 128 isoform 1 [Homo sapiens]
Length = 428
Score = 60.8 bits (146), Expect = 2e-09
Identities = 68/292 (23%), Positives = 124/292 (42%), Gaps = 57/292 (19%)
Query: 93 QVPAQAVVRAVLEDNSSSVDFADLPA--LFGVPLAPEGIRGYLMEVKPANACHP---IEA 147
+VP V R V E + V D P + GV + P+G G L NAC+P
Sbjct: 52 RVPHTGVNRTVWELSEEGVYGQDSPLEPVAGVLVPPDG-PGAL------NACNPHTNFTV 104
Query: 148 PRLGNRSLGA--IVLIRRYD-CTFDLKVLNAQRAGFEAAIVHNVHS--DDLVSMTHVYED 202
P + ++ + LI+R CTF K+ A G A++ N ++++ M+H
Sbjct: 105 PTVWGSTVQVSWLALIQRGGGCTFADKIHLAYERGASGAVIFNFPGTRNEVIPMSHP--- 161
Query: 203 LRGQIAIPSVFVSEAASQDLRVILGCNKSAHALLLPDDPPCHDLGCHPVLTVSWVLGCTL 262
G + I ++ + + +++ + ++ + H WV ++
Sbjct: 162 --GAVDIVAIMIGNL--KGTKILQSIQRGIQVTMVIEVGKKHG---------PWVNHYSI 208
Query: 263 ALVVSAFFVLNHLWLW------------AQACCSHRRPVKTSTCQ---KAQVRTFTWHN- 306
V +FF++ + A+A +R +K + + Q+RT +
Sbjct: 209 FFVSVSFFIITAATVGYFIFYSARRLRNARAQSRKQRQLKADAKKAIGRLQLRTLKQGDK 268
Query: 307 ------DLCAICLDEYEEGDQLKILPCSHTYHCKCIDPWFSQAPRRSCPVCK 352
D CA+C++ Y+ D ++IL C+H +H C+DPW + R+CP+CK
Sbjct: 269 EIGPDGDSCAVCIELYKPNDLVRILTCNHIFHKTCVDPWLLE--HRTCPMCK 318
>gi|37622894 ring finger protein 126 [Homo sapiens]
Length = 311
Score = 57.0 bits (136), Expect = 3e-08
Identities = 28/77 (36%), Positives = 41/77 (53%), Gaps = 12/77 (15%)
Query: 309 CAICLDEYEEGDQLKILPCSHTYHCKCIDPWFSQAPRRSCPVCKQSVAA----------T 358
C +C D+Y G++++ LPC+H +H CI PW Q SCPVC++S+ T
Sbjct: 229 CPVCKDDYALGERVRQLPCNHLFHDGCIVPWLEQ--HDSCPVCRKSLTGQNTATNPPGLT 286
Query: 359 EDSFDSTTYSFRDEDPS 375
SF S++ S PS
Sbjct: 287 GVSFSSSSSSSSSSSPS 303
>gi|5174653 ring finger protein 6 [Homo sapiens]
Length = 685
Score = 56.6 bits (135), Expect = 4e-08
Identities = 20/48 (41%), Positives = 33/48 (68%), Gaps = 2/48 (4%)
Query: 308 LCAICLDEYEEGDQLKILPCSHTYHCKCIDPWFSQAPRRSCPVCKQSV 355
+C++C+ +Y G++L+ LPC H +H CID W S+ +CP+C+Q V
Sbjct: 631 ICSVCISDYVTGNKLRQLPCMHEFHIHCIDRWLSE--NCTCPICRQPV 676
>gi|34305295 ring finger protein 6 [Homo sapiens]
Length = 685
Score = 56.6 bits (135), Expect = 4e-08
Identities = 20/48 (41%), Positives = 33/48 (68%), Gaps = 2/48 (4%)
Query: 308 LCAICLDEYEEGDQLKILPCSHTYHCKCIDPWFSQAPRRSCPVCKQSV 355
+C++C+ +Y G++L+ LPC H +H CID W S+ +CP+C+Q V
Sbjct: 631 ICSVCISDYVTGNKLRQLPCMHEFHIHCIDRWLSE--NCTCPICRQPV 676
>gi|34305293 ring finger protein 6 [Homo sapiens]
Length = 685
Score = 56.6 bits (135), Expect = 4e-08
Identities = 20/48 (41%), Positives = 33/48 (68%), Gaps = 2/48 (4%)
Query: 308 LCAICLDEYEEGDQLKILPCSHTYHCKCIDPWFSQAPRRSCPVCKQSV 355
+C++C+ +Y G++L+ LPC H +H CID W S+ +CP+C+Q V
Sbjct: 631 ICSVCISDYVTGNKLRQLPCMHEFHIHCIDRWLSE--NCTCPICRQPV 676
>gi|37577185 ring finger protein 38 isoform 2 [Homo sapiens]
Length = 432
Score = 55.8 bits (133), Expect = 7e-08
Identities = 18/45 (40%), Positives = 30/45 (66%), Gaps = 2/45 (4%)
Query: 308 LCAICLDEYEEGDQLKILPCSHTYHCKCIDPWFSQAPRRSCPVCK 352
LC +C+ ++E L++LPC+H +H KC+D W R+CP+C+
Sbjct: 379 LCVVCMCDFESRQLLRVLPCNHEFHAKCVDKWLK--ANRTCPICR 421
>gi|37577181 ring finger protein 38 isoform 2 [Homo sapiens]
Length = 432
Score = 55.8 bits (133), Expect = 7e-08
Identities = 18/45 (40%), Positives = 30/45 (66%), Gaps = 2/45 (4%)
Query: 308 LCAICLDEYEEGDQLKILPCSHTYHCKCIDPWFSQAPRRSCPVCK 352
LC +C+ ++E L++LPC+H +H KC+D W R+CP+C+
Sbjct: 379 LCVVCMCDFESRQLLRVLPCNHEFHAKCVDKWLK--ANRTCPICR 421
>gi|37577179 ring finger protein 38 isoform 3 [Homo sapiens]
Length = 465
Score = 55.8 bits (133), Expect = 7e-08
Identities = 18/45 (40%), Positives = 30/45 (66%), Gaps = 2/45 (4%)
Query: 308 LCAICLDEYEEGDQLKILPCSHTYHCKCIDPWFSQAPRRSCPVCK 352
LC +C+ ++E L++LPC+H +H KC+D W R+CP+C+
Sbjct: 412 LCVVCMCDFESRQLLRVLPCNHEFHAKCVDKWLK--ANRTCPICR 454
>gi|37577177 ring finger protein 38 isoform 2 [Homo sapiens]
Length = 432
Score = 55.8 bits (133), Expect = 7e-08
Identities = 18/45 (40%), Positives = 30/45 (66%), Gaps = 2/45 (4%)
Query: 308 LCAICLDEYEEGDQLKILPCSHTYHCKCIDPWFSQAPRRSCPVCK 352
LC +C+ ++E L++LPC+H +H KC+D W R+CP+C+
Sbjct: 379 LCVVCMCDFESRQLLRVLPCNHEFHAKCVDKWLK--ANRTCPICR 421
>gi|37577175 ring finger protein 38 isoform 1 [Homo sapiens]
Length = 515
Score = 55.8 bits (133), Expect = 7e-08
Identities = 18/45 (40%), Positives = 30/45 (66%), Gaps = 2/45 (4%)
Query: 308 LCAICLDEYEEGDQLKILPCSHTYHCKCIDPWFSQAPRRSCPVCK 352
LC +C+ ++E L++LPC+H +H KC+D W R+CP+C+
Sbjct: 462 LCVVCMCDFESRQLLRVLPCNHEFHAKCVDKWLK--ANRTCPICR 504
>gi|7662486 ring finger protein 44 [Homo sapiens]
Length = 432
Score = 55.5 bits (132), Expect = 9e-08
Identities = 18/45 (40%), Positives = 29/45 (64%), Gaps = 2/45 (4%)
Query: 308 LCAICLDEYEEGDQLKILPCSHTYHCKCIDPWFSQAPRRSCPVCK 352
LC +C ++E L++LPC+H +H KC+D W R+CP+C+
Sbjct: 379 LCVVCFSDFEARQLLRVLPCNHEFHTKCVDKWLK--ANRTCPICR 421
>gi|197245452 ring finger protein 24 isoform 2 [Homo sapiens]
Length = 169
Score = 55.1 bits (131), Expect = 1e-07
Identities = 23/60 (38%), Positives = 36/60 (60%), Gaps = 3/60 (5%)
Query: 296 KAQVRTFTWHNDLCAICLDEYEEGDQLKILPCSHTYHCKCIDPWFSQAPRRSCPVCKQSV 355
K +V+ H +LCA+CL++++ D+L I PC H +H KC+ W R+ CP+C V
Sbjct: 87 KEKVKELNLH-ELCAVCLEDFKPRDELGICPCKHAFHRKCLIKWLE--VRKVCPLCNMPV 143
>gi|197245450 ring finger protein 24 isoform 1 [Homo sapiens]
Length = 148
Score = 55.1 bits (131), Expect = 1e-07
Identities = 23/60 (38%), Positives = 36/60 (60%), Gaps = 3/60 (5%)
Query: 296 KAQVRTFTWHNDLCAICLDEYEEGDQLKILPCSHTYHCKCIDPWFSQAPRRSCPVCKQSV 355
K +V+ H +LCA+CL++++ D+L I PC H +H KC+ W R+ CP+C V
Sbjct: 66 KEKVKELNLH-ELCAVCLEDFKPRDELGICPCKHAFHRKCLIKWLE--VRKVCPLCNMPV 122
>gi|6857791 ring finger protein 24 isoform 1 [Homo sapiens]
Length = 148
Score = 55.1 bits (131), Expect = 1e-07
Identities = 23/60 (38%), Positives = 36/60 (60%), Gaps = 3/60 (5%)
Query: 296 KAQVRTFTWHNDLCAICLDEYEEGDQLKILPCSHTYHCKCIDPWFSQAPRRSCPVCKQSV 355
K +V+ H +LCA+CL++++ D+L I PC H +H KC+ W R+ CP+C V
Sbjct: 66 KEKVKELNLH-ELCAVCLEDFKPRDELGICPCKHAFHRKCLIKWLE--VRKVCPLCNMPV 122
>gi|63025220 ring finger protein 215 [Homo sapiens]
Length = 377
Score = 55.1 bits (131), Expect = 1e-07
Identities = 22/57 (38%), Positives = 34/57 (59%), Gaps = 2/57 (3%)
Query: 307 DLCAICLDEYEEGDQLKILPCSHTYHCKCIDPWFSQAPRRSCPVCKQSVAATEDSFD 363
+ CA+CLD + L++LPC H +H C+DPW +++CP+CK +V S D
Sbjct: 323 ETCAVCLDYFCNKQWLRVLPCKHEFHRDCVDPWLML--QQTCPLCKFNVLGNRYSDD 377
>gi|38045931 ring finger protein 122 [Homo sapiens]
Length = 155
Score = 54.7 bits (130), Expect = 2e-07
Identities = 20/66 (30%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
Query: 296 KAQVRTFTWHNDLCAICLDEYEEGDQLKILPCSHTYHCKCIDPWFSQAPRRSCPVCKQSV 355
K + + CA+CL++++ D+L +LPC H +H KC+ W R CP+C + +
Sbjct: 80 KGDAKKLQLYGQTCAVCLEDFKGKDELGVLPCQHAFHRKCLVKWLE--VRCVCPMCNKPI 137
Query: 356 AATEDS 361
A+ ++
Sbjct: 138 ASPSEA 143
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.322 0.135 0.440
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 19,482,223
Number of Sequences: 37866
Number of extensions: 996299
Number of successful extensions: 4692
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 100
Number of HSP's successfully gapped in prelim test: 242
Number of HSP's that attempted gapping in prelim test: 4349
Number of HSP's gapped (non-prelim): 533
length of query: 429
length of database: 18,247,518
effective HSP length: 105
effective length of query: 324
effective length of database: 14,271,588
effective search space: 4623994512
effective search space used: 4623994512
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.