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Search of human proteins with 109715862
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|109715862 gem (nuclear organelle) associated protein 8 [Homo
sapiens]
(242 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|109715862 gem (nuclear organelle) associated protein 8 [Homo ... 510 e-145
gi|109715864 gem (nuclear organelle) associated protein 8 [Homo ... 510 e-145
gi|8923481 gem (nuclear organelle) associated protein 8 [Homo sa... 510 e-145
gi|4505257 moesin [Homo sapiens] 42 6e-04
gi|4506467 radixin [Homo sapiens] 40 0.002
gi|239747174 PREDICTED: hypothetical protein XP_002343931, parti... 39 0.004
gi|90819233 myeloid/lymphoid or mixed-lineage leukemia (trithora... 38 0.007
gi|169167715 PREDICTED: hypothetical protein [Homo sapiens] 38 0.009
gi|210032790 hypothetical protein LOC27146 [Homo sapiens] 38 0.009
gi|56549694 enabled homolog isoform a [Homo sapiens] 37 0.015
gi|39930375 enabled homolog isoform b [Homo sapiens] 37 0.015
gi|148746195 trichohyalin [Homo sapiens] 37 0.015
gi|68299759 ecotropic viral integration site 5 [Homo sapiens] 37 0.020
gi|239757964 PREDICTED: hypothetical protein [Homo sapiens] 36 0.034
gi|197333879 genetic suppressor element 1 isoform 2 [Homo sapiens] 36 0.034
gi|44955926 genetic suppressor element 1 isoform 1 [Homo sapiens] 36 0.034
gi|15721939 metastatic lymph node 51 [Homo sapiens] 35 0.045
gi|102467242 inner centromere protein antigens 135/155kDa isofor... 35 0.045
gi|7662238 apoptotic chromatin condensation inducer 1 [Homo sapi... 35 0.059
gi|21396500 HIRA interacting protein 3 [Homo sapiens] 35 0.059
gi|71143123 U11/U12 snRNP 48K [Homo sapiens] 35 0.077
gi|239747134 PREDICTED: hypothetical protein XP_002343921 [Homo ... 34 0.10
gi|122937247 unc-13 homolog A [Homo sapiens] 34 0.10
gi|215490056 meningioma expressed antigen 5 (hyaluronidase) isof... 34 0.13
gi|11024698 meningioma expressed antigen 5 (hyaluronidase) isofo... 34 0.13
gi|102467235 inner centromere protein antigens 135/155kDa isofor... 34 0.13
gi|148762982 hypothetical protein LOC387640 [Homo sapiens] 34 0.13
gi|153085395 histone deacetylase 4 [Homo sapiens] 33 0.17
gi|8923421 seryl-tRNA synthetase 2 isoform b precursor [Homo sap... 33 0.17
gi|225579074 seryl-tRNA synthetase 2 isoform a precursor [Homo s... 33 0.17
>gi|109715862 gem (nuclear organelle) associated protein 8 [Homo
sapiens]
Length = 242
Score = 510 bits (1313), Expect = e-145
Identities = 242/242 (100%), Positives = 242/242 (100%)
Query: 1 MAAVKASTSKATRPWYSHPVYARYWQHYHQAMAWMQSHHNAYRKAVESCFNLPWYLPSAL 60
MAAVKASTSKATRPWYSHPVYARYWQHYHQAMAWMQSHHNAYRKAVESCFNLPWYLPSAL
Sbjct: 1 MAAVKASTSKATRPWYSHPVYARYWQHYHQAMAWMQSHHNAYRKAVESCFNLPWYLPSAL 60
Query: 61 LPQSSYDNEAAYPQSFYDHHVAWQDYPCSSSHFRRSGQHPRYSSRIQASTKEDQALSKEE 120
LPQSSYDNEAAYPQSFYDHHVAWQDYPCSSSHFRRSGQHPRYSSRIQASTKEDQALSKEE
Sbjct: 61 LPQSSYDNEAAYPQSFYDHHVAWQDYPCSSSHFRRSGQHPRYSSRIQASTKEDQALSKEE 120
Query: 121 EMETESDAEVECDLSNMEITEELRQYFAETERHREERRRQQQLDAERLDSYVNADHDLYC 180
EMETESDAEVECDLSNMEITEELRQYFAETERHREERRRQQQLDAERLDSYVNADHDLYC
Sbjct: 121 EMETESDAEVECDLSNMEITEELRQYFAETERHREERRRQQQLDAERLDSYVNADHDLYC 180
Query: 181 NTRRSVEAPTERPGERRQAEMKRLYGDSAAKIQAMEAAVQLSFDKHCDRKQPKYWPVIPL 240
NTRRSVEAPTERPGERRQAEMKRLYGDSAAKIQAMEAAVQLSFDKHCDRKQPKYWPVIPL
Sbjct: 181 NTRRSVEAPTERPGERRQAEMKRLYGDSAAKIQAMEAAVQLSFDKHCDRKQPKYWPVIPL 240
Query: 241 KF 242
KF
Sbjct: 241 KF 242
>gi|109715864 gem (nuclear organelle) associated protein 8 [Homo
sapiens]
Length = 242
Score = 510 bits (1313), Expect = e-145
Identities = 242/242 (100%), Positives = 242/242 (100%)
Query: 1 MAAVKASTSKATRPWYSHPVYARYWQHYHQAMAWMQSHHNAYRKAVESCFNLPWYLPSAL 60
MAAVKASTSKATRPWYSHPVYARYWQHYHQAMAWMQSHHNAYRKAVESCFNLPWYLPSAL
Sbjct: 1 MAAVKASTSKATRPWYSHPVYARYWQHYHQAMAWMQSHHNAYRKAVESCFNLPWYLPSAL 60
Query: 61 LPQSSYDNEAAYPQSFYDHHVAWQDYPCSSSHFRRSGQHPRYSSRIQASTKEDQALSKEE 120
LPQSSYDNEAAYPQSFYDHHVAWQDYPCSSSHFRRSGQHPRYSSRIQASTKEDQALSKEE
Sbjct: 61 LPQSSYDNEAAYPQSFYDHHVAWQDYPCSSSHFRRSGQHPRYSSRIQASTKEDQALSKEE 120
Query: 121 EMETESDAEVECDLSNMEITEELRQYFAETERHREERRRQQQLDAERLDSYVNADHDLYC 180
EMETESDAEVECDLSNMEITEELRQYFAETERHREERRRQQQLDAERLDSYVNADHDLYC
Sbjct: 121 EMETESDAEVECDLSNMEITEELRQYFAETERHREERRRQQQLDAERLDSYVNADHDLYC 180
Query: 181 NTRRSVEAPTERPGERRQAEMKRLYGDSAAKIQAMEAAVQLSFDKHCDRKQPKYWPVIPL 240
NTRRSVEAPTERPGERRQAEMKRLYGDSAAKIQAMEAAVQLSFDKHCDRKQPKYWPVIPL
Sbjct: 181 NTRRSVEAPTERPGERRQAEMKRLYGDSAAKIQAMEAAVQLSFDKHCDRKQPKYWPVIPL 240
Query: 241 KF 242
KF
Sbjct: 241 KF 242
>gi|8923481 gem (nuclear organelle) associated protein 8 [Homo
sapiens]
Length = 242
Score = 510 bits (1313), Expect = e-145
Identities = 242/242 (100%), Positives = 242/242 (100%)
Query: 1 MAAVKASTSKATRPWYSHPVYARYWQHYHQAMAWMQSHHNAYRKAVESCFNLPWYLPSAL 60
MAAVKASTSKATRPWYSHPVYARYWQHYHQAMAWMQSHHNAYRKAVESCFNLPWYLPSAL
Sbjct: 1 MAAVKASTSKATRPWYSHPVYARYWQHYHQAMAWMQSHHNAYRKAVESCFNLPWYLPSAL 60
Query: 61 LPQSSYDNEAAYPQSFYDHHVAWQDYPCSSSHFRRSGQHPRYSSRIQASTKEDQALSKEE 120
LPQSSYDNEAAYPQSFYDHHVAWQDYPCSSSHFRRSGQHPRYSSRIQASTKEDQALSKEE
Sbjct: 61 LPQSSYDNEAAYPQSFYDHHVAWQDYPCSSSHFRRSGQHPRYSSRIQASTKEDQALSKEE 120
Query: 121 EMETESDAEVECDLSNMEITEELRQYFAETERHREERRRQQQLDAERLDSYVNADHDLYC 180
EMETESDAEVECDLSNMEITEELRQYFAETERHREERRRQQQLDAERLDSYVNADHDLYC
Sbjct: 121 EMETESDAEVECDLSNMEITEELRQYFAETERHREERRRQQQLDAERLDSYVNADHDLYC 180
Query: 181 NTRRSVEAPTERPGERRQAEMKRLYGDSAAKIQAMEAAVQLSFDKHCDRKQPKYWPVIPL 240
NTRRSVEAPTERPGERRQAEMKRLYGDSAAKIQAMEAAVQLSFDKHCDRKQPKYWPVIPL
Sbjct: 181 NTRRSVEAPTERPGERRQAEMKRLYGDSAAKIQAMEAAVQLSFDKHCDRKQPKYWPVIPL 240
Query: 241 KF 242
KF
Sbjct: 241 KF 242
>gi|4505257 moesin [Homo sapiens]
Length = 577
Score = 41.6 bits (96), Expect = 6e-04
Identities = 38/139 (27%), Positives = 64/139 (46%), Gaps = 12/139 (8%)
Query: 97 GQHPRYSSRIQASTKEDQALSKEEEMETESDAEVECDLSNMEITEELRQYFAETERHREE 156
G H Y R + T E Q + + E L N E+ ++ AE E+ + E
Sbjct: 286 GNHELYMRRRKPDTIEVQQMKAQAREEKHQKQMERAMLEN----EKKKREMAEKEKEKIE 341
Query: 157 RRRQQQLDAERL----DSYVNADHDLYCNTRRSVEAPTERPGERRQAEMKRLYGDSAAKI 212
R +++ + ERL + A +L TRR++E ER +R Q+E ++L +
Sbjct: 342 REKEELM--ERLKQIEEQTKKAQQELEEQTRRALELEQER--KRAQSEAEKLAKERQEAE 397
Query: 213 QAMEAAVQLSFDKHCDRKQ 231
+A EA +Q S D+ ++Q
Sbjct: 398 EAKEALLQASRDQKKTQEQ 416
>gi|4506467 radixin [Homo sapiens]
Length = 583
Score = 40.0 bits (92), Expect = 0.002
Identities = 36/139 (25%), Positives = 64/139 (46%), Gaps = 12/139 (8%)
Query: 97 GQHPRYSSRIQASTKEDQALSKEEEMETESDAEVECDLSNMEITEELRQYFAETERHREE 156
G H Y R + T E Q + + E L N E+ ++ AE E+ R E
Sbjct: 286 GNHELYMRRRKPDTIEVQQMKAQAREEKHQKQLERAQLEN----EKKKREIAEKEKERIE 341
Query: 157 RRRQQQLDAERL----DSYVNADHDLYCNTRRSVEAPTERPGERRQAEMKRLYGDSAAKI 212
R +++ + ERL + + A +L TR+++E ER +R + E +RL + A
Sbjct: 342 REKEELM--ERLKQIEEQTIKAQKELEEQTRKALELDQER--KRAKEEAERLEKERRAAE 397
Query: 213 QAMEAAVQLSFDKHCDRKQ 231
+A A + + D+ +++Q
Sbjct: 398 EAKSAIAKQAADQMKNQEQ 416
>gi|239747174 PREDICTED: hypothetical protein XP_002343931, partial
[Homo sapiens]
Length = 213
Score = 38.9 bits (89), Expect = 0.004
Identities = 35/118 (29%), Positives = 50/118 (42%), Gaps = 8/118 (6%)
Query: 92 HFRRSGQHPRYSSRIQASTKEDQALSKEEEMETESDAEVECDLSNMEITEELRQYFAETE 151
H R Q R +R D+ K+ + E E E E D TE R ET+
Sbjct: 43 HSERDRQRDRERNR---ERDRDREREKQTDREGERQRERERDRDRQRETERERDKERETD 99
Query: 152 RHRE---ERRRQQQLDAERLDSYVNADHDLYCNTRRSVEAPTERPGERRQAEMKRLYG 206
RH E ER++Q++ + ER+ + R + T+R E RQAE +R G
Sbjct: 100 RHTETDRERQKQKEREMERVRDR-EREKQKEMGRERQTDRETDRERE-RQAERERETG 155
Score = 30.0 bits (66), Expect = 1.9
Identities = 30/117 (25%), Positives = 49/117 (41%), Gaps = 20/117 (17%)
Query: 95 RSGQHPRYSSRIQASTKEDQA-------LSKEEEMETESDAEVECDLSNMEITEELRQYF 147
R Q R R++ +E Q +E + E E AE E + TE+ R
Sbjct: 108 RQKQKEREMERVRDREREKQKEMGRERQTDRETDRERERQAERERETGRERKTED-RHRE 166
Query: 148 AETERHREERRRQQQLDAERLDSYVNADHDLYCNTRRSVEAPTERPGER-RQAEMKR 203
E ER RE R+++ + ER + + R + T+R +R R++E +R
Sbjct: 167 RERERKRERERKRETKERER-----------HTDMERERQRETDRKRDRQRESERER 212
>gi|90819233 myeloid/lymphoid or mixed-lineage leukemia (trithorax
homolog, Drosophila); translocated to, 4 isoform 2 [Homo
sapiens]
Length = 1651
Score = 38.1 bits (87), Expect = 0.007
Identities = 33/115 (28%), Positives = 50/115 (43%), Gaps = 28/115 (24%)
Query: 101 RYSSRIQASTKEDQALSKEEEMETESDAEVECDLSNMEITEELRQYFAETERHREERRRQ 160
++ R+Q S ++D E++ E E D D+ M I + L AE EERRRQ
Sbjct: 1565 QFQKRLQESKQKD-----EDDEEEEDD-----DVDTMLIMQRLE---AERRARDEERRRQ 1611
Query: 161 QQLDAERLDSYVNADHDLYCNTRRSVEAPTERPGERRQAEMKRLYGDSAAKIQAM 215
QQL+ R +R E + ERR+ E +R D+ K+ +
Sbjct: 1612 QQLEEMR---------------KREAEDRARQEEERRRQEEERTKRDAEEKVMVL 1651
>gi|169167715 PREDICTED: hypothetical protein [Homo sapiens]
Length = 285
Score = 37.7 bits (86), Expect = 0.009
Identities = 31/113 (27%), Positives = 49/113 (43%), Gaps = 9/113 (7%)
Query: 95 RSGQHPRYSSRIQASTKEDQ-----ALSKEEEMETESDAEVECDLSNME---ITEELRQY 146
R + R R + +E Q + K+ E+ETE D + E ++ E E RQ
Sbjct: 122 RQEERERQRDRKREKDRERQRQREIGIDKDREIETEKDRDREREMGETERYRDRERERQK 181
Query: 147 FAETERHREERRRQQQLDAER-LDSYVNADHDLYCNTRRSVEAPTERPGERRQ 198
ET R R+ R++++ D ER D + D Y + ER ER++
Sbjct: 182 QRETRRDRDRERQREKEDRERDRDRQKEREKDRYRERETGRDRDKERDRERQR 234
Score = 31.6 bits (70), Expect = 0.65
Identities = 25/112 (22%), Positives = 44/112 (39%), Gaps = 3/112 (2%)
Query: 95 RSGQHPRYSSRIQASTK---EDQALSKEEEMETESDAEVECDLSNMEITEELRQYFAETE 151
R Q R R +A + +D+ + K+ + + + D E + E ETE
Sbjct: 60 RERQRERERQRKRAKERHREKDREIEKDRDRQRKRDRERQRWRDRDRKRERWGDRDRETE 119
Query: 152 RHREERRRQQQLDAERLDSYVNADHDLYCNTRRSVEAPTERPGERRQAEMKR 203
R+E R +Q+ D ++ + R +E +R ER E +R
Sbjct: 120 TERQEERERQRDRKREKDRERQRQREIGIDKDREIETEKDRDREREMGETER 171
>gi|210032790 hypothetical protein LOC27146 [Homo sapiens]
Length = 1060
Score = 37.7 bits (86), Expect = 0.009
Identities = 28/118 (23%), Positives = 56/118 (47%), Gaps = 6/118 (5%)
Query: 99 HPRYSSRIQASTKEDQALSKEEEMETESDAEVECDLSNMEITEELRQYFAETERHREERR 158
HP+ Q+ KE + +M+T+ +A E + + E+LR+ +TE EE++
Sbjct: 369 HPQQD---QSCLKECPCMKGGTDMQTKKEASAETEYMKQQYEEDLRKIKHQTE---EEKK 422
Query: 159 RQQQLDAERLDSYVNADHDLYCNTRRSVEAPTERPGERRQAEMKRLYGDSAAKIQAME 216
+ +RL+ V + R SVEA ++ +A+++ + S +I+ +E
Sbjct: 423 HLKDQLVKRLEDLVKKHTVEIKSVRSSVEAERKKLQREVEAQLEEVRKKSEKEIKQLE 480
>gi|56549694 enabled homolog isoform a [Homo sapiens]
Length = 591
Score = 37.0 bits (84), Expect = 0.015
Identities = 29/116 (25%), Positives = 50/116 (43%), Gaps = 12/116 (10%)
Query: 105 RIQASTKEDQALSKEEEMETESDAEVECDLSNMEITEELRQYFAETERHREERRRQQQLD 164
R + + + L ++E +E + E + L + R+ ER R+ER RQ+QL+
Sbjct: 193 RERQERERQERLERQERLERQERLERQERLDRERQERQERERLERLERERQERERQEQLE 252
Query: 165 AERLDSYVNADHDLYCNTRRSVEAPTERPGERRQAEMKRLYGDSAAKIQAMEAAVQ 220
E+L+ + SVE P + + GDS+A ++AA Q
Sbjct: 253 REQLE-WERERRISSAAAPASVETP-----------LNSVLGDSSASEPGLQAASQ 296
Score = 27.7 bits (60), Expect = 9.4
Identities = 25/102 (24%), Positives = 43/102 (42%), Gaps = 3/102 (2%)
Query: 105 RIQASTKEDQALSKEEEMETESDAEVECDLSNMEITEELRQYFAETERHREERRRQQQLD 164
++Q ++ + + E E +E + E E R + ER R+ER RQ++L+
Sbjct: 146 QLQEQQRQKELERERLERERMERERLERERLERERLERERLEQEQLERERQERERQERLE 205
Query: 165 -AERLDSYVNADHDLYCNTRRSVEAPTERPG--ERRQAEMKR 203
ERL+ + + R ER ER + E +R
Sbjct: 206 RQERLERQERLERQERLDRERQERQERERLERLERERQERER 247
>gi|39930375 enabled homolog isoform b [Homo sapiens]
Length = 570
Score = 37.0 bits (84), Expect = 0.015
Identities = 29/116 (25%), Positives = 50/116 (43%), Gaps = 12/116 (10%)
Query: 105 RIQASTKEDQALSKEEEMETESDAEVECDLSNMEITEELRQYFAETERHREERRRQQQLD 164
R + + + L ++E +E + E + L + R+ ER R+ER RQ+QL+
Sbjct: 193 RERQERERQERLERQERLERQERLERQERLDRERQERQERERLERLERERQERERQEQLE 252
Query: 165 AERLDSYVNADHDLYCNTRRSVEAPTERPGERRQAEMKRLYGDSAAKIQAMEAAVQ 220
E+L+ + SVE P + + GDS+A ++AA Q
Sbjct: 253 REQLE-WERERRISSAAAPASVETP-----------LNSVLGDSSASEPGLQAASQ 296
Score = 27.7 bits (60), Expect = 9.4
Identities = 25/102 (24%), Positives = 43/102 (42%), Gaps = 3/102 (2%)
Query: 105 RIQASTKEDQALSKEEEMETESDAEVECDLSNMEITEELRQYFAETERHREERRRQQQLD 164
++Q ++ + + E E +E + E E R + ER R+ER RQ++L+
Sbjct: 146 QLQEQQRQKELERERLERERMERERLERERLERERLERERLEQEQLERERQERERQERLE 205
Query: 165 -AERLDSYVNADHDLYCNTRRSVEAPTERPG--ERRQAEMKR 203
ERL+ + + R ER ER + E +R
Sbjct: 206 RQERLERQERLERQERLDRERQERQERERLERLERERQERER 247
>gi|148746195 trichohyalin [Homo sapiens]
Length = 1943
Score = 37.0 bits (84), Expect = 0.015
Identities = 26/93 (27%), Positives = 46/93 (49%), Gaps = 6/93 (6%)
Query: 111 KEDQALSKEEEMETESDAEVECDLSNMEITEELRQYFAETERHREERRRQQQLDAERLDS 170
KE++ L +EE E E L +E +ELR+ E E+ ++ RR+QQL ++ +
Sbjct: 255 KEEEKLQEEEPQRQRELQEEEEQLRKLE-RQELRRERQEEEQQQQRLRREQQLRRKQEEE 313
Query: 171 YVNADHDLYCNTRRSVEAPTERPGERRQAEMKR 203
+ RR + E+ ERR+ +++R
Sbjct: 314 RREQQEE-----RREQQERREQQEERREQQLRR 341
Score = 36.2 bits (82), Expect = 0.026
Identities = 33/141 (23%), Positives = 61/141 (43%), Gaps = 13/141 (9%)
Query: 94 RRSGQHPRYSSRIQASTKEDQALSKEEEMETESDAEVECDLSNMEITEELRQYFAETERH 153
RR +Y + +E+Q L +E E + E +C EEL+Q E +
Sbjct: 1072 RRQELERQYRKEEELQQEEEQLLREEPEKRRRQERERQC-----REEEELQQ--EEEQLL 1124
Query: 154 REERRRQQQLDAERLDSYVNADHDLYCNTRRSVEAPTERPGERRQAEMKRLYGDSAAKIQ 213
REER ++++ + ER Y + + + E P +RR+ E++R Y + Q
Sbjct: 1125 REEREKRRRQELER--QYREEEE----VQQEEEQLLREEPEKRRRQELERQYREEEELQQ 1178
Query: 214 AMEAAVQLSFDKHCDRKQPKY 234
E ++ +K ++ +Y
Sbjct: 1179 EEEQLLREEQEKRRQERERQY 1199
Score = 35.4 bits (80), Expect = 0.045
Identities = 32/134 (23%), Positives = 58/134 (43%), Gaps = 7/134 (5%)
Query: 105 RIQASTKEDQALSKEEEMETESDAEVECDLSNMEITEELRQYFA----ETERHREERRRQ 160
R Q +E Q ++EE E E E ++ +E R+ + ETERH +ERR+Q
Sbjct: 415 REQQLRREQQLRREQEEERHEQKHEQERREQRLKREQEERRDWLKREEETERHEQERRKQ 474
Query: 161 Q---QLDAERLDSYVNADHDLYCNTRRSVEAPTERPGERRQAEMKRLYGDSAAKIQAMEA 217
Q + ER + ++ + + + E R E R+ + + + Q + +
Sbjct: 475 QLKRDQEEERRERWLKLEEEERREQQERREQQLRREQEERREQRLKRQEEEERLQQRLRS 534
Query: 218 AVQLSFDKHCDRKQ 231
QL ++ R+Q
Sbjct: 535 EQQLRREQEERREQ 548
Score = 35.4 bits (80), Expect = 0.045
Identities = 32/138 (23%), Positives = 58/138 (42%), Gaps = 16/138 (11%)
Query: 98 QHPRYSSRIQASTKE--DQALSKEEEMETESDAEVECDLSNMEITEELRQYFAETERHRE 155
+ R R++ +E +Q L +EE E + E L E EE RQ ++E E
Sbjct: 582 EEERRQQRLKREQEERLEQRLKREEVERLEQEERREQRLKREEPEEERRQQLLKSEEQEE 641
Query: 156 ER----------RRQQQL----DAERLDSYVNADHDLYCNTRRSVEAPTERPGERRQAEM 201
R RR+Q+L + ERL+ + +H+ + E E+ ER ++ +
Sbjct: 642 RRQQQLRREQQERREQRLKREEEEERLEQRLKREHEEERREQELAEEEQEQARERIKSRI 701
Query: 202 KRLYGDSAAKIQAMEAAV 219
+ ++ A ++ V
Sbjct: 702 PKWQWQLESEADARQSKV 719
Score = 30.8 bits (68), Expect = 1.1
Identities = 30/145 (20%), Positives = 59/145 (40%), Gaps = 20/145 (13%)
Query: 95 RSGQHPRYSSRIQASTKEDQALSKEEEMETESDAEVECDLSNMEITEELRQYFAETERHR 154
R R ++ +E++ L +EEE + E E RQY E E R
Sbjct: 1155 REEPEKRRRQELERQYREEEELQQEEEQLLREEQEKRRQ-------ERERQYREEEELQR 1207
Query: 155 EERRRQQQLDAERLD-------SYVNA--DHDLYCNTRRSVE----APTERPGERRQAEM 201
++R+++ + + +R D NA D+ +YC R + + ++ + Q ++
Sbjct: 1208 QKRKQRYRDEDQRSDLKWQWEPEKENAVRDNKVYCKGRENEQFRQLEDSQLRDRQSQQDL 1267
Query: 202 KRLYGDSAAKIQAMEAAVQLSFDKH 226
+ L G+ + + E D+H
Sbjct: 1268 QHLLGEQQERDREQERRRWQQRDRH 1292
Score = 30.4 bits (67), Expect = 1.4
Identities = 25/108 (23%), Positives = 43/108 (39%), Gaps = 6/108 (5%)
Query: 94 RRSGQHPRYSSRIQASTKEDQALSKEEEMETESDAEVECDLSNMEITEELRQYFAETERH 153
RR + +Y + KE+Q L +E E + E EEL+Q + R
Sbjct: 952 RRQERERQYRKDKKLQQKEEQLLGEEPEKRRRQERE-----KKYREEEELQQEEEQLLRE 1006
Query: 154 REERRRQQQLDAE-RLDSYVNADHDLYCNTRRSVEAPTERPGERRQAE 200
E+RR+Q+ + + R + + + R ER + R+ E
Sbjct: 1007 EREKRRRQEWERQYRKKDELQQEEEQLLREEREKRRLQERERQYREEE 1054
Score = 30.0 bits (66), Expect = 1.9
Identities = 31/135 (22%), Positives = 60/135 (44%), Gaps = 9/135 (6%)
Query: 94 RRSGQHPRYSS-RIQASTKEDQALSKEEEMETESDAEVECDLSNME--ITEELRQYFAET 150
R+ +H Y+ +Q +++Q L +EEE E + + + E EE + E
Sbjct: 882 RKRRRHTLYAKPALQEQLRKEQQLLQEEEEELQREEREKRRRQEQERQYREEEQLQQEEE 941
Query: 151 ERHREERRRQQQLDAERLDSYVNADHDLYCNTRRSVEAPTERPGERRQAEMKRLYGDSAA 210
+ REER ++++ + ER D L ++ + E P +RR+ E ++ Y +
Sbjct: 942 QLLREEREKRRRQERER---QYRKDKKL---QQKEEQLLGEEPEKRRRQEREKKYREEEE 995
Query: 211 KIQAMEAAVQLSFDK 225
Q E ++ +K
Sbjct: 996 LQQEEEQLLREEREK 1010
Score = 29.6 bits (65), Expect = 2.5
Identities = 24/107 (22%), Positives = 47/107 (43%), Gaps = 10/107 (9%)
Query: 105 RIQASTKEDQALSKEEE------METESDAEVECDLSNMEITEELRQYFAETERHREERR 158
R+Q + +Q L +E+E ++ E + +E + + E + + + EERR
Sbjct: 527 RLQQRLRSEQQLRREQEERREQLLKREEEKRLEQERREQRLKREQEERRDQLLKREEERR 586
Query: 159 RQ--QQLDAERLDSYVNAD--HDLYCNTRRSVEAPTERPGERRQAEM 201
+Q ++ ERL+ + + L RR E P E R+ ++
Sbjct: 587 QQRLKREQEERLEQRLKREEVERLEQEERREQRLKREEPEEERRQQL 633
Score = 28.9 bits (63), Expect = 4.2
Identities = 22/101 (21%), Positives = 42/101 (41%), Gaps = 1/101 (0%)
Query: 103 SSRIQASTKEDQALSKEEEMETESDAEVECDLSNMEITEELRQYFAETERHREERRRQQQ 162
+ R + ++ Q +EE E ++E + E E Q + R E+R ++Q
Sbjct: 464 TERHEQERRKQQLKRDQEEERRERWLKLE-EEERREQQERREQQLRREQEERREQRLKRQ 522
Query: 163 LDAERLDSYVNADHDLYCNTRRSVEAPTERPGERRQAEMKR 203
+ ERL + ++ L E +R E+R + +R
Sbjct: 523 EEEERLQQRLRSEQQLRREQEERREQLLKREEEKRLEQERR 563
Score = 28.5 bits (62), Expect = 5.5
Identities = 26/99 (26%), Positives = 39/99 (39%), Gaps = 19/99 (19%)
Query: 107 QASTKEDQALSKEEEMETESDAEVECDLSNMEITEELR--QYFAETERHREERRRQQQLD 164
Q +E Q K+EE E E E EE R Q E E RE++ R++Q +
Sbjct: 298 QRLRREQQLRRKQEEERREQQEERREQQERREQQEERREQQLRREQEERREQQLRREQEE 357
Query: 165 AERLDSYVNADHDLYCNTRRSVEAPTERPGERRQAEMKR 203
RR + E+ ERR+ +++R
Sbjct: 358 -----------------ERREQQLRREQEEERREQQLRR 379
Score = 28.1 bits (61), Expect = 7.2
Identities = 30/123 (24%), Positives = 51/123 (41%), Gaps = 13/123 (10%)
Query: 94 RRSGQHPRYSSRIQASTKE--DQALSKEEEMETESDA---EVECDLSNMEITEELRQYFA 148
RR Q R +++ +E +Q L +E+E E E E + ++ E +
Sbjct: 327 RREQQEERREQQLRREQEERREQQLRREQEEERREQQLRREQEEERREQQLRREQQLRRE 386
Query: 149 ETERHREERRRQQQLDAE---RLDSYVNADHDLYCNTRRSVEAPTER-----PGERRQAE 200
+ R ++ RR+QQL E R + + + L + E ER ERR+
Sbjct: 387 QQLRREQQLRREQQLRREQQLRREQQLRREQQLRREQQLRREQEEERHEQKHEQERREQR 446
Query: 201 MKR 203
+KR
Sbjct: 447 LKR 449
Score = 28.1 bits (61), Expect = 7.2
Identities = 25/116 (21%), Positives = 46/116 (39%), Gaps = 3/116 (2%)
Query: 111 KEDQALSKEEEMETESDAEVECDLSNMEITEELRQYFAETERHREERRRQQQLDAERLDS 170
+E+Q L ++E + E+ + EE Q ER R+ + +QQL + +
Sbjct: 1348 REEQPLRRQERDRKFREEELRHQEQGRKFLEE-EQRLRRQERERKFLKEEQQLRCQEREQ 1406
Query: 171 YVNADHDLYCNTRRSVEAPTERPGERRQAEMKRLYGDSAAKIQAMEAAVQLSFDKH 226
+ D D + ER + R+ E + + K +E QL ++H
Sbjct: 1407 QLRQDRDRKFREEEQQLSRQERDRKFREEEQQVRRQERERKF--LEEEQQLRQERH 1460
Score = 27.7 bits (60), Expect = 9.4
Identities = 21/101 (20%), Positives = 44/101 (43%), Gaps = 3/101 (2%)
Query: 105 RIQASTKEDQALSKEEEMETESDAEVECDLSNMEITEELRQYFAETERHREERRRQ--QQ 162
R + + +Q L +E+++ E E L + ++ ++H +ERR Q ++
Sbjct: 390 RREQQLRREQQLRREQQLRREQQLRREQQLRREQQLRREQEEERHEQKHEQERREQRLKR 449
Query: 163 LDAERLDSYVNADH-DLYCNTRRSVEAPTERPGERRQAEMK 202
ER D + + + RR + ++ ERR+ +K
Sbjct: 450 EQEERRDWLKREEETERHEQERRKQQLKRDQEEERRERWLK 490
>gi|68299759 ecotropic viral integration site 5 [Homo sapiens]
Length = 810
Score = 36.6 bits (83), Expect = 0.020
Identities = 28/113 (24%), Positives = 48/113 (42%), Gaps = 21/113 (18%)
Query: 89 SSSHFRRSGQHP-RYSSRIQASTKEDQALSKEEEMETESDAEVEC------------DLS 135
+S+H RR+ Q ++Q + +++ L + AE+EC +
Sbjct: 597 NSNHLRRAEQEVISLQEKVQYLSAQNKGLLTQLSEAKRKQAEIECKNKEEVMAVRLREAD 656
Query: 136 NMEITEELRQYFAETERHREERRRQQQLD--------AERLDSYVNADHDLYC 180
++ ELRQ+ AE E +EE + Q QL+ E D +H+L C
Sbjct: 657 SIAAVAELRQHIAELEIQKEEGKLQGQLNKSDSNQYIGELKDQIAELNHELRC 709
>gi|239757964 PREDICTED: hypothetical protein [Homo sapiens]
Length = 290
Score = 35.8 bits (81), Expect = 0.034
Identities = 34/115 (29%), Positives = 53/115 (46%), Gaps = 10/115 (8%)
Query: 95 RSGQHPRYSSRIQASTKE-DQALSKEEEMETESDAEVECDLSNMEITEELRQYFAETERH 153
R Q R R + +E D+ KE E +TE D + + + TE R E ++
Sbjct: 127 REKQKGRERERDRGRERERDRDREKERERQTEKDRDGQRETE----TERERDREREKQKE 182
Query: 154 RE-ERRRQQQLDAER-LDSYVNADHDLYCNTRRSVEAPTERPGER---RQAEMKR 203
RE ER R +Q D E+ + + + D T+ + T+R GER R+ E +R
Sbjct: 183 RETERDRDRQRDTEKERERQTDRERDRQRKTQTERQRETDREGERETDRRRERQR 237
>gi|197333879 genetic suppressor element 1 isoform 2 [Homo sapiens]
Length = 1113
Score = 35.8 bits (81), Expect = 0.034
Identities = 43/159 (27%), Positives = 65/159 (40%), Gaps = 21/159 (13%)
Query: 11 ATRPWYSHPVYARYWQHYHQAMAWMQSHHNAYRKAVESCFNLPWYLPSALLPQSSYDNEA 70
AT Y HP Y H A S+ A+ S F P P +L P
Sbjct: 140 ATAAAYYHPSYLAPHPFPHPAFRMDDSY---CLSALRSPF-YPIPTPGSLPP-------- 187
Query: 71 AYPQSFYDHHVAWQDYPCSSSHFRRSGQHPRYSSRIQASTKE-DQALSKEEEMETESDAE 129
+P + + H++ YP SH + H S + A + D+ L +E E E E + E
Sbjct: 188 LHPSAMH-LHLSGVRYPPELSHSSLAALHSERMSGLSAERLQMDEELRRERERERERERE 246
Query: 130 VECDLSNMEITEELRQYFAETERHRE-ERRRQQQLDAER 167
E D E ++ E E+ RE E+ R+++ + ER
Sbjct: 247 READ------REREKEREREREKEREQEKEREREKERER 279
>gi|44955926 genetic suppressor element 1 isoform 1 [Homo sapiens]
Length = 1217
Score = 35.8 bits (81), Expect = 0.034
Identities = 43/159 (27%), Positives = 65/159 (40%), Gaps = 21/159 (13%)
Query: 11 ATRPWYSHPVYARYWQHYHQAMAWMQSHHNAYRKAVESCFNLPWYLPSALLPQSSYDNEA 70
AT Y HP Y H A S+ A+ S F P P +L P
Sbjct: 244 ATAAAYYHPSYLAPHPFPHPAFRMDDSY---CLSALRSPF-YPIPTPGSLPP-------- 291
Query: 71 AYPQSFYDHHVAWQDYPCSSSHFRRSGQHPRYSSRIQASTKE-DQALSKEEEMETESDAE 129
+P + + H++ YP SH + H S + A + D+ L +E E E E + E
Sbjct: 292 LHPSAMH-LHLSGVRYPPELSHSSLAALHSERMSGLSAERLQMDEELRRERERERERERE 350
Query: 130 VECDLSNMEITEELRQYFAETERHRE-ERRRQQQLDAER 167
E D E ++ E E+ RE E+ R+++ + ER
Sbjct: 351 READ------REREKEREREREKEREQEKEREREKERER 383
>gi|15721939 metastatic lymph node 51 [Homo sapiens]
Length = 703
Score = 35.4 bits (80), Expect = 0.045
Identities = 32/124 (25%), Positives = 49/124 (39%), Gaps = 16/124 (12%)
Query: 117 SKEEEMETESDAEVECDLSNMEITEELRQYFAETERHREERRRQQQLDAERLDSYVNADH 176
++E E E+E E + LS+ E E+ E + EE + +L +E D+
Sbjct: 72 AEESECESEDGIEGDAVLSDYESAEDSE---GEEGEYSEEENSKVELKSEANDAV----- 123
Query: 177 DLYCNTRRSVEAPTERPGERRQAEMKRLYGDSAAKIQAMEAAVQLSFDKHC----DRKQP 232
N+ E E+P + +R GD + +E V KH DRK P
Sbjct: 124 ----NSSTKEEKGEEKPDTKSTVTGERQSGDGQESTEPVENKVGKKGPKHLDDDEDRKNP 179
Query: 233 KYWP 236
Y P
Sbjct: 180 AYIP 183
>gi|102467242 inner centromere protein antigens 135/155kDa isoform 2
[Homo sapiens]
Length = 914
Score = 35.4 bits (80), Expect = 0.045
Identities = 30/113 (26%), Positives = 49/113 (43%), Gaps = 6/113 (5%)
Query: 105 RIQASTKEDQALSKEEEMETESDAEVECDLSNMEITEELRQYFAETERHREERRRQQQLD 164
R+ KE Q L E + + +AE L ++ E+ R+ E + REER R+
Sbjct: 527 RMDPKEKERQRL---ENLRRKEEAE---QLRRQKVEEDKRRRLEEVKLKREERLRKVLQA 580
Query: 165 AERLDSYVNADHDLYCNTRRSVEAPTERPGERRQAEMKRLYGDSAAKIQAMEA 217
ER++ ++ TE+ E R AE K +A K++ +EA
Sbjct: 581 RERVEQMKEEKKKQIEQKFAQIDEKTEKAKEERLAEEKAKKKAAAKKMEEVEA 633
Score = 33.1 bits (74), Expect = 0.22
Identities = 30/114 (26%), Positives = 44/114 (38%), Gaps = 16/114 (14%)
Query: 118 KEEEMETESDAEVECDLSNMEITEELRQYFAETERHREERRRQQQLDAERLDSYVNADHD 177
KEEE E A L+ E Q E ER +ERR Q++ + E
Sbjct: 664 KEEEQERLRKAAEAKRLAEQREQERREQERREQERREQERREQERREQE----------- 712
Query: 178 LYCNTRRSVEAPTERPGERRQAEMKRLYGDSAAKIQAMEAAVQLSFDKHCDRKQ 231
R+ E R ER QAE + + A ++Q + +L K + +Q
Sbjct: 713 -----RQLAEQERRREQERLQAERELQEREKALRLQKEQLQRELEEKKKKEEQQ 761
Score = 28.9 bits (63), Expect = 4.2
Identities = 16/74 (21%), Positives = 35/74 (47%)
Query: 94 RRSGQHPRYSSRIQASTKEDQALSKEEEMETESDAEVECDLSNMEITEELRQYFAETERH 153
RR + R Q ++++ L+++E + + E +L E L++ + E
Sbjct: 693 RREQERREQERREQERREQERQLAEQERRREQERLQAERELQEREKALRLQKEQLQRELE 752
Query: 154 REERRRQQQLDAER 167
++++ +QQ AER
Sbjct: 753 EKKKKEEQQRLAER 766
>gi|7662238 apoptotic chromatin condensation inducer 1 [Homo sapiens]
Length = 1341
Score = 35.0 bits (79), Expect = 0.059
Identities = 19/70 (27%), Positives = 31/70 (44%)
Query: 98 QHPRYSSRIQASTKEDQALSKEEEMETESDAEVECDLSNMEITEELRQYFAETERHREER 157
QHPR R Q +Q +E EME E + ++ E R +R R+ER
Sbjct: 1129 QHPRAEQREQERAVREQWAEREREMERRERTRSEREWDRDKVREGPRSRSRSRDRRRKER 1188
Query: 158 RRQQQLDAER 167
+ ++ +E+
Sbjct: 1189 AKSKEKKSEK 1198
Score = 28.5 bits (62), Expect = 5.5
Identities = 30/130 (23%), Positives = 58/130 (44%), Gaps = 24/130 (18%)
Query: 100 PRYSSRIQASTKEDQALSKEEEMETESDAEVE---------------------CDLSNME 138
PR SR + ++++A SKE++ E + A+ E L++ +
Sbjct: 1174 PRSRSRSRDRRRKERAKSKEKKSEKKEKAQEEPPAKLLDDLFRKTKAAPCIYWLPLTDSQ 1233
Query: 139 ITEELRQYFAETERHREERRRQQQLDAERLDSYVNADHDLYCNTRRSVEAPTERPGER-R 197
I ++ + AE + RE+RR++Q+ + E+ + A+ + R R +R R
Sbjct: 1234 IVQKEAER-AERAKEREKRRKEQE-EEEQKEREKEAERERNRQLEREKRREHSRERDRER 1291
Query: 198 QAEMKRLYGD 207
+ E +R GD
Sbjct: 1292 ERERERDRGD 1301
>gi|21396500 HIRA interacting protein 3 [Homo sapiens]
Length = 556
Score = 35.0 bits (79), Expect = 0.059
Identities = 30/130 (23%), Positives = 58/130 (44%), Gaps = 5/130 (3%)
Query: 107 QASTKEDQALSKEEEMETESDAEVECDLSNMEITEELRQYFAETERH----REERRRQQQ 162
+AS QA + EE E E + + T+ L++ E+E ++E+R ++
Sbjct: 184 KASVSRKQAREESEESEAEPVQRTAKKVEGNKGTKSLKESEQESEEEILAQKKEQREEEV 243
Query: 163 LDAERLDSYVNADHDLYCNTRRSVEAPTERPGERRQAEMKRLYGDSAAKIQAMEAAVQLS 222
+ E+ + D + ++ E +++++ KRL GDS ++ + EAA
Sbjct: 244 EEEEKEEDEEKGDWKPRTRSNGRRKSAREERSCKQKSQAKRLLGDSDSEEEQKEAA-SSG 302
Query: 223 FDKHCDRKQP 232
D DR+ P
Sbjct: 303 DDSGRDREPP 312
>gi|71143123 U11/U12 snRNP 48K [Homo sapiens]
Length = 339
Score = 34.7 bits (78), Expect = 0.077
Identities = 39/154 (25%), Positives = 59/154 (38%), Gaps = 20/154 (12%)
Query: 60 LLPQSSYDNEAAYPQSFYDHHVAWQDYPCSSSHFRRSGQHPRYSSR-------IQASTKE 112
L + + DN P+S+ + +DY +R H S I +E
Sbjct: 192 LAAKINQDNSRKSPKSYLEILAEVRDYKRRRQSYRAKNVHITKKSYTEVIRDVINVHMEE 251
Query: 113 DQALSKEEEMETESDAEV--ECDLSNMEITEELRQYF-AETERHREERRRQQQLDAERLD 169
+EE+ + E DAE E ++++ + Y AE RHR +R R
Sbjct: 252 LSNHWQEEQEKAEDDAEKNEERRSASVDSRQSGGSYLDAECSRHRRDRSRSPHKRKR--- 308
Query: 170 SYVNADHDLYCNTRRSVEAPTERPGERRQAEMKR 203
N D D C +RR ER GER + +R
Sbjct: 309 ---NKDKDKNCESRRR----KERDGERHHSHKRR 335
>gi|239747134 PREDICTED: hypothetical protein XP_002343921 [Homo
sapiens]
Length = 600
Score = 34.3 bits (77), Expect = 0.10
Identities = 31/112 (27%), Positives = 45/112 (40%), Gaps = 18/112 (16%)
Query: 95 RSGQHPRYSSRIQASTKEDQALSKEEEMETESDAEVECDLSNMEITEELRQYFAETERHR 154
R + R R + + ED+ + E E E + E E + E RQ +TER R
Sbjct: 185 RQERRERERQREKENKTEDRHSERGRERERERETETETERKRQTDRERDRQ--RKTERER 242
Query: 155 E---ERRRQQQLDAERLDSYVNADHDLYCNTRRSVEAPTERPGERRQAEMKR 203
E ER R + + ER + R E +R +RRQ E +R
Sbjct: 243 EKQAERERASERETER-------------DKERERERDRDRDRDRRQKERER 281
Score = 32.7 bits (73), Expect = 0.29
Identities = 35/119 (29%), Positives = 52/119 (43%), Gaps = 16/119 (13%)
Query: 94 RRSGQHPRYSSRI-QASTKEDQALSKEEEMETESDAEVECDLSNMEITEELRQYFA--ET 150
RR + R + R Q T+ D+ ++ E + E + E E + E R+ ET
Sbjct: 274 RRQKERERQTDRKRQRRTERDRETERKRERQRERERERERNRKRERERERERERERQRET 333
Query: 151 ERHRE-----ERRRQQQLDAERLDSYVNADHDLYCNTRRSVEAPTERPGER-RQAEMKR 203
ER RE +R+RQ ++D ER + RR E ER ER RQ+ +R
Sbjct: 334 ERDREKERERKRKRQTEMDRER-------NRQTGREGRRQAERERERERERDRQSARER 385
Score = 30.0 bits (66), Expect = 1.9
Identities = 32/123 (26%), Positives = 53/123 (43%), Gaps = 19/123 (15%)
Query: 94 RRSGQHPRYSSRIQASTKE-----DQALSKEEEMETESDAEVECDLSNMEITEELRQYFA 148
+R + R R + + +E D+ + E E + DAE E + T+ RQ
Sbjct: 116 QREKERNRQKERERETEREGERGRDRQTDGQRERERQRDAEKERERQ----TDRERQ--R 169
Query: 149 ETERHRE-----ERRRQQQLDAERLDSYVNADHDLYCNTRRSVEAPTERPGE---RRQAE 200
+TER+R+ E+ RQ++ + ER N D + R E E E +RQ +
Sbjct: 170 QTERNRQKEREREKNRQERRERERQREKENKTEDRHSERGRERERERETETETERKRQTD 229
Query: 201 MKR 203
+R
Sbjct: 230 RER 232
Score = 30.0 bits (66), Expect = 1.9
Identities = 21/76 (27%), Positives = 36/76 (47%), Gaps = 3/76 (3%)
Query: 95 RSGQHPRYSSRIQASTKEDQALSKEEEMETESDAEVECDLSNMEITEELRQYFA--ETER 152
R + R R A +E++ ++ + + E + + E D TE+ R+ E+ER
Sbjct: 369 RERERERERDRQSAREREERERDRDRDRQKERERQTEKDRDGQRETEKQREREKDRESER 428
Query: 153 HREE-RRRQQQLDAER 167
RE R R++Q ER
Sbjct: 429 GRERGREREKQKGRER 444
Score = 29.6 bits (65), Expect = 2.5
Identities = 25/98 (25%), Positives = 46/98 (46%), Gaps = 8/98 (8%)
Query: 112 EDQALSKEEEMETESD---AEVECDLSNMEITEELRQYFAETERHREERRRQQQLDAERL 168
+D+ ++++E E + E E D E+ R + +RHRE +R +++ +
Sbjct: 52 DDRERNRQKERERRREKRQTERETDRKRERRREKDRH--RKRDRHRERQRDREKERERQT 109
Query: 169 DSYVNADHDLYCNTRRSVEAPTERPGER---RQAEMKR 203
D + + N ++ E TER GER RQ + +R
Sbjct: 110 DRERDRQREKERNRQKERERETEREGERGRDRQTDGQR 147
Score = 29.3 bits (64), Expect = 3.2
Identities = 28/114 (24%), Positives = 49/114 (42%), Gaps = 15/114 (13%)
Query: 97 GQHPRYSSRIQASTKEDQALSKEEEMETESDAEVECDLSNMEITEELRQYFAETERHREE 156
GQ R R A + ++ +E + +TE + + E + E+ RQ E ER RE+
Sbjct: 145 GQRERERQR-DAEKERERQTDRERQRQTERNRQKERE------REKNRQERRERERQREK 197
Query: 157 RRRQQQLDAER-------LDSYVNADHDLYCNTRRSVEAPTERPGERRQAEMKR 203
+ + +ER ++ + + R + TER E +QAE +R
Sbjct: 198 ENKTEDRHSERGRERERERETETETERKRQTDRERDRQRKTERERE-KQAERER 250
>gi|122937247 unc-13 homolog A [Homo sapiens]
Length = 1791
Score = 34.3 bits (77), Expect = 0.10
Identities = 41/219 (18%), Positives = 79/219 (36%), Gaps = 34/219 (15%)
Query: 26 QHYHQAMAWMQSHHNAYRKAVESCFNLPWYLPSALLPQSSYDNEAAYP------QSFYDH 79
QH + + + YR + P+Y S P +S + P +S+ D
Sbjct: 273 QHNDDPDSAVDDRDSDYRSETSNSIPPPYYTTSQ--PNASVHQYSVRPPPLGSRESYSDS 330
Query: 80 HVAWQDY-------PCSSSHFRRSGQHPRYSSRIQASTKEDQALSKEEEMETESDAE--- 129
+++++ P SS + SG+ + SS++ D+ + +ME E D +
Sbjct: 331 MHSYEEFSEPQALSPTGSSRYASSGELSQGSSQLSEDFDPDEHSLQGSDMEDERDRDSYH 390
Query: 130 ------------VECDLSNMEITEELRQYFAETE--RHREERRRQQQLDAERLDSYVNAD 175
D E+ E+L + E E EE +++ + L SY +
Sbjct: 391 SCHSSVSYHKDSPRWDQDEEELEEDLEDFLEEEELPEDEEELEEEEEEVPDDLGSYAQRE 450
Query: 176 HDLYCNTR--RSVEAPTERPGERRQAEMKRLYGDSAAKI 212
+ + + P PG+ +A + AK+
Sbjct: 451 DVAVAEPKDFKRISLPPAAPGKEDKAPVAPTEAPDMAKV 489
>gi|215490056 meningioma expressed antigen 5 (hyaluronidase) isoform
b [Homo sapiens]
Length = 863
Score = 33.9 bits (76), Expect = 0.13
Identities = 16/81 (19%), Positives = 36/81 (44%)
Query: 113 DQALSKEEEMETESDAEVECDLSNMEITEELRQYFAETERHREERRRQQQLDAERLDSYV 172
D + K+EE + ++D ++ ++ ++ EEL+ + E E + + + + +
Sbjct: 413 DMVVEKQEETDHKNDNQILSEIVEAKMAEELKPMDTDKESIAESKSPEMSMQEDCISDIA 472
Query: 173 NADHDLYCNTRRSVEAPTERP 193
D N + V P E+P
Sbjct: 473 PMQTDEQTNKEQFVPGPNEKP 493
>gi|11024698 meningioma expressed antigen 5 (hyaluronidase) isoform
a [Homo sapiens]
Length = 916
Score = 33.9 bits (76), Expect = 0.13
Identities = 16/81 (19%), Positives = 36/81 (44%)
Query: 113 DQALSKEEEMETESDAEVECDLSNMEITEELRQYFAETERHREERRRQQQLDAERLDSYV 172
D + K+EE + ++D ++ ++ ++ EEL+ + E E + + + + +
Sbjct: 466 DMVVEKQEETDHKNDNQILSEIVEAKMAEELKPMDTDKESIAESKSPEMSMQEDCISDIA 525
Query: 173 NADHDLYCNTRRSVEAPTERP 193
D N + V P E+P
Sbjct: 526 PMQTDEQTNKEQFVPGPNEKP 546
>gi|102467235 inner centromere protein antigens 135/155kDa isoform 1
[Homo sapiens]
Length = 918
Score = 33.9 bits (76), Expect = 0.13
Identities = 29/107 (27%), Positives = 47/107 (43%), Gaps = 6/107 (5%)
Query: 111 KEDQALSKEEEMETESDAEVECDLSNMEITEELRQYFAETERHREERRRQQQLDAERLDS 170
KE Q L E + + +AE L ++ E+ R+ E + REER R+ ER++
Sbjct: 537 KERQRL---ENLRRKEEAE---QLRRQKVEEDKRRRLEEVKLKREERLRKVLQARERVEQ 590
Query: 171 YVNADHDLYCNTRRSVEAPTERPGERRQAEMKRLYGDSAAKIQAMEA 217
++ TE+ E R AE K +A K++ +EA
Sbjct: 591 MKEEKKKQIEQKFAQIDEKTEKAKEERLAEEKAKKKAAAKKMEEVEA 637
Score = 33.1 bits (74), Expect = 0.22
Identities = 30/114 (26%), Positives = 44/114 (38%), Gaps = 16/114 (14%)
Query: 118 KEEEMETESDAEVECDLSNMEITEELRQYFAETERHREERRRQQQLDAERLDSYVNADHD 177
KEEE E A L+ E Q E ER +ERR Q++ + E
Sbjct: 668 KEEEQERLRKAAEAKRLAEQREQERREQERREQERREQERREQERREQE----------- 716
Query: 178 LYCNTRRSVEAPTERPGERRQAEMKRLYGDSAAKIQAMEAAVQLSFDKHCDRKQ 231
R+ E R ER QAE + + A ++Q + +L K + +Q
Sbjct: 717 -----RQLAEQERRREQERLQAERELQEREKALRLQKEQLQRELEEKKKKEEQQ 765
Score = 28.9 bits (63), Expect = 4.2
Identities = 16/74 (21%), Positives = 35/74 (47%)
Query: 94 RRSGQHPRYSSRIQASTKEDQALSKEEEMETESDAEVECDLSNMEITEELRQYFAETERH 153
RR + R Q ++++ L+++E + + E +L E L++ + E
Sbjct: 697 RREQERREQERREQERREQERQLAEQERRREQERLQAERELQEREKALRLQKEQLQRELE 756
Query: 154 REERRRQQQLDAER 167
++++ +QQ AER
Sbjct: 757 EKKKKEEQQRLAER 770
>gi|148762982 hypothetical protein LOC387640 [Homo sapiens]
Length = 908
Score = 33.9 bits (76), Expect = 0.13
Identities = 35/130 (26%), Positives = 55/130 (42%), Gaps = 22/130 (16%)
Query: 14 PWYSHPVYARYWQHYHQAMAWMQSHHNAYRKAVESCFNLPWYLPSALLPQS-SYDNEAAY 72
P + H + + H+H+A QSHH + + +L S P+S S D+E++
Sbjct: 336 PHHHHHHHHHHHHHHHRAQPPQQSHHPPHHHRPQP------HLGS--FPESCSSDSESS- 386
Query: 73 PQSFYDHHVAWQDYPCSSSHFRRSGQHPRYSSRIQASTKEDQALSKEEEMETESDAEVEC 132
S+ DH D+ S S SS +S +E++ +EEE E E
Sbjct: 387 --SYSDHAANDSDFGSSLSS----------SSNSVSSEEEEEEGEEEEEEEEEEGGSGAS 434
Query: 133 DLSNMEITEE 142
D S + EE
Sbjct: 435 DSSEVSSEEE 444
>gi|153085395 histone deacetylase 4 [Homo sapiens]
Length = 1084
Score = 33.5 bits (75), Expect = 0.17
Identities = 24/125 (19%), Positives = 55/125 (44%), Gaps = 17/125 (13%)
Query: 111 KEDQALSKEEEMETESDAEVECDLSNMEITEELRQYFAETERHREERRRQQQLDAERLDS 170
++ + LS++ E + + + ++ M+ +EL ++ + ERHR+E+ ++Q ++L
Sbjct: 95 RQHEQLSRQHEAQLHEHIKQQQEMLAMKHQQELLEHQRKLERHRQEQELEKQHREQKLQQ 154
Query: 171 YVNADHDLYCNTRRSVEAPTERPGERRQAEMKRLYGDSAAKIQAMEAAVQLSFDKHCDRK 230
N + + S A TE + ++ + + + A+ HC
Sbjct: 155 LKNKE-----KGKESAVASTEVKMKLQEFVLNK------------KKALAHRNLNHCISS 197
Query: 231 QPKYW 235
P+YW
Sbjct: 198 DPRYW 202
>gi|8923421 seryl-tRNA synthetase 2 isoform b precursor [Homo
sapiens]
Length = 518
Score = 33.5 bits (75), Expect = 0.17
Identities = 28/88 (31%), Positives = 39/88 (44%), Gaps = 7/88 (7%)
Query: 76 FYDHHVAWQDYP----CSSSHFR---RSGQHPRYSSRIQASTKEDQALSKEEEMETESDA 128
F DH VA++D P CSS+ +R +GQ PR R+ TK + +E S
Sbjct: 308 FMDHTVAFRDLPVRMVCSSTCYRAETNTGQEPRGLYRVHHFTKVEMFGVTGPGLEQSSQL 367
Query: 129 EVECDLSNMEITEELRQYFAETERHREE 156
E MEI EL +F + +E
Sbjct: 368 LEEFLSLQMEILTELGLHFRVLDMPTQE 395
>gi|225579074 seryl-tRNA synthetase 2 isoform a precursor [Homo
sapiens]
Length = 520
Score = 33.5 bits (75), Expect = 0.17
Identities = 28/88 (31%), Positives = 39/88 (44%), Gaps = 7/88 (7%)
Query: 76 FYDHHVAWQDYP----CSSSHFR---RSGQHPRYSSRIQASTKEDQALSKEEEMETESDA 128
F DH VA++D P CSS+ +R +GQ PR R+ TK + +E S
Sbjct: 310 FMDHTVAFRDLPVRMVCSSTCYRAETNTGQEPRGLYRVHHFTKVEMFGVTGPGLEQSSQL 369
Query: 129 EVECDLSNMEITEELRQYFAETERHREE 156
E MEI EL +F + +E
Sbjct: 370 LEEFLSLQMEILTELGLHFRVLDMPTQE 397
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.316 0.126 0.391
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,273,628
Number of Sequences: 37866
Number of extensions: 402778
Number of successful extensions: 3145
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 67
Number of HSP's successfully gapped in prelim test: 194
Number of HSP's that attempted gapping in prelim test: 2516
Number of HSP's gapped (non-prelim): 716
length of query: 242
length of database: 18,247,518
effective HSP length: 99
effective length of query: 143
effective length of database: 14,498,784
effective search space: 2073326112
effective search space used: 2073326112
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.