Guide to the Human Genome
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Search of human proteins with 109715862

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|109715862 gem (nuclear organelle) associated protein 8 [Homo
sapiens]
         (242 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|109715862 gem (nuclear organelle) associated protein 8 [Homo ...   510   e-145
gi|109715864 gem (nuclear organelle) associated protein 8 [Homo ...   510   e-145
gi|8923481 gem (nuclear organelle) associated protein 8 [Homo sa...   510   e-145
gi|4505257 moesin [Homo sapiens]                                       42   6e-04
gi|4506467 radixin [Homo sapiens]                                      40   0.002
gi|239747174 PREDICTED: hypothetical protein XP_002343931, parti...    39   0.004
gi|90819233 myeloid/lymphoid or mixed-lineage leukemia (trithora...    38   0.007
gi|169167715 PREDICTED: hypothetical protein [Homo sapiens]            38   0.009
gi|210032790 hypothetical protein LOC27146 [Homo sapiens]              38   0.009
gi|56549694 enabled homolog isoform a [Homo sapiens]                   37   0.015
gi|39930375 enabled homolog isoform b [Homo sapiens]                   37   0.015
gi|148746195 trichohyalin [Homo sapiens]                               37   0.015
gi|68299759 ecotropic viral integration site 5 [Homo sapiens]          37   0.020
gi|239757964 PREDICTED: hypothetical protein [Homo sapiens]            36   0.034
gi|197333879 genetic suppressor element 1 isoform 2 [Homo sapiens]     36   0.034
gi|44955926 genetic suppressor element 1 isoform 1 [Homo sapiens]      36   0.034
gi|15721939 metastatic lymph node 51 [Homo sapiens]                    35   0.045
gi|102467242 inner centromere protein antigens 135/155kDa isofor...    35   0.045
gi|7662238 apoptotic chromatin condensation inducer 1 [Homo sapi...    35   0.059
gi|21396500 HIRA interacting protein 3 [Homo sapiens]                  35   0.059
gi|71143123 U11/U12 snRNP 48K [Homo sapiens]                           35   0.077
gi|239747134 PREDICTED: hypothetical protein XP_002343921 [Homo ...    34   0.10 
gi|122937247 unc-13 homolog A [Homo sapiens]                           34   0.10 
gi|215490056 meningioma expressed antigen 5 (hyaluronidase) isof...    34   0.13 
gi|11024698 meningioma expressed antigen 5 (hyaluronidase) isofo...    34   0.13 
gi|102467235 inner centromere protein antigens 135/155kDa isofor...    34   0.13 
gi|148762982 hypothetical protein LOC387640 [Homo sapiens]             34   0.13 
gi|153085395 histone deacetylase 4 [Homo sapiens]                      33   0.17 
gi|8923421 seryl-tRNA synthetase 2 isoform b precursor [Homo sap...    33   0.17 
gi|225579074 seryl-tRNA synthetase 2 isoform a precursor [Homo s...    33   0.17 

>gi|109715862 gem (nuclear organelle) associated protein 8 [Homo
           sapiens]
          Length = 242

 Score =  510 bits (1313), Expect = e-145
 Identities = 242/242 (100%), Positives = 242/242 (100%)

Query: 1   MAAVKASTSKATRPWYSHPVYARYWQHYHQAMAWMQSHHNAYRKAVESCFNLPWYLPSAL 60
           MAAVKASTSKATRPWYSHPVYARYWQHYHQAMAWMQSHHNAYRKAVESCFNLPWYLPSAL
Sbjct: 1   MAAVKASTSKATRPWYSHPVYARYWQHYHQAMAWMQSHHNAYRKAVESCFNLPWYLPSAL 60

Query: 61  LPQSSYDNEAAYPQSFYDHHVAWQDYPCSSSHFRRSGQHPRYSSRIQASTKEDQALSKEE 120
           LPQSSYDNEAAYPQSFYDHHVAWQDYPCSSSHFRRSGQHPRYSSRIQASTKEDQALSKEE
Sbjct: 61  LPQSSYDNEAAYPQSFYDHHVAWQDYPCSSSHFRRSGQHPRYSSRIQASTKEDQALSKEE 120

Query: 121 EMETESDAEVECDLSNMEITEELRQYFAETERHREERRRQQQLDAERLDSYVNADHDLYC 180
           EMETESDAEVECDLSNMEITEELRQYFAETERHREERRRQQQLDAERLDSYVNADHDLYC
Sbjct: 121 EMETESDAEVECDLSNMEITEELRQYFAETERHREERRRQQQLDAERLDSYVNADHDLYC 180

Query: 181 NTRRSVEAPTERPGERRQAEMKRLYGDSAAKIQAMEAAVQLSFDKHCDRKQPKYWPVIPL 240
           NTRRSVEAPTERPGERRQAEMKRLYGDSAAKIQAMEAAVQLSFDKHCDRKQPKYWPVIPL
Sbjct: 181 NTRRSVEAPTERPGERRQAEMKRLYGDSAAKIQAMEAAVQLSFDKHCDRKQPKYWPVIPL 240

Query: 241 KF 242
           KF
Sbjct: 241 KF 242


>gi|109715864 gem (nuclear organelle) associated protein 8 [Homo
           sapiens]
          Length = 242

 Score =  510 bits (1313), Expect = e-145
 Identities = 242/242 (100%), Positives = 242/242 (100%)

Query: 1   MAAVKASTSKATRPWYSHPVYARYWQHYHQAMAWMQSHHNAYRKAVESCFNLPWYLPSAL 60
           MAAVKASTSKATRPWYSHPVYARYWQHYHQAMAWMQSHHNAYRKAVESCFNLPWYLPSAL
Sbjct: 1   MAAVKASTSKATRPWYSHPVYARYWQHYHQAMAWMQSHHNAYRKAVESCFNLPWYLPSAL 60

Query: 61  LPQSSYDNEAAYPQSFYDHHVAWQDYPCSSSHFRRSGQHPRYSSRIQASTKEDQALSKEE 120
           LPQSSYDNEAAYPQSFYDHHVAWQDYPCSSSHFRRSGQHPRYSSRIQASTKEDQALSKEE
Sbjct: 61  LPQSSYDNEAAYPQSFYDHHVAWQDYPCSSSHFRRSGQHPRYSSRIQASTKEDQALSKEE 120

Query: 121 EMETESDAEVECDLSNMEITEELRQYFAETERHREERRRQQQLDAERLDSYVNADHDLYC 180
           EMETESDAEVECDLSNMEITEELRQYFAETERHREERRRQQQLDAERLDSYVNADHDLYC
Sbjct: 121 EMETESDAEVECDLSNMEITEELRQYFAETERHREERRRQQQLDAERLDSYVNADHDLYC 180

Query: 181 NTRRSVEAPTERPGERRQAEMKRLYGDSAAKIQAMEAAVQLSFDKHCDRKQPKYWPVIPL 240
           NTRRSVEAPTERPGERRQAEMKRLYGDSAAKIQAMEAAVQLSFDKHCDRKQPKYWPVIPL
Sbjct: 181 NTRRSVEAPTERPGERRQAEMKRLYGDSAAKIQAMEAAVQLSFDKHCDRKQPKYWPVIPL 240

Query: 241 KF 242
           KF
Sbjct: 241 KF 242


>gi|8923481 gem (nuclear organelle) associated protein 8 [Homo
           sapiens]
          Length = 242

 Score =  510 bits (1313), Expect = e-145
 Identities = 242/242 (100%), Positives = 242/242 (100%)

Query: 1   MAAVKASTSKATRPWYSHPVYARYWQHYHQAMAWMQSHHNAYRKAVESCFNLPWYLPSAL 60
           MAAVKASTSKATRPWYSHPVYARYWQHYHQAMAWMQSHHNAYRKAVESCFNLPWYLPSAL
Sbjct: 1   MAAVKASTSKATRPWYSHPVYARYWQHYHQAMAWMQSHHNAYRKAVESCFNLPWYLPSAL 60

Query: 61  LPQSSYDNEAAYPQSFYDHHVAWQDYPCSSSHFRRSGQHPRYSSRIQASTKEDQALSKEE 120
           LPQSSYDNEAAYPQSFYDHHVAWQDYPCSSSHFRRSGQHPRYSSRIQASTKEDQALSKEE
Sbjct: 61  LPQSSYDNEAAYPQSFYDHHVAWQDYPCSSSHFRRSGQHPRYSSRIQASTKEDQALSKEE 120

Query: 121 EMETESDAEVECDLSNMEITEELRQYFAETERHREERRRQQQLDAERLDSYVNADHDLYC 180
           EMETESDAEVECDLSNMEITEELRQYFAETERHREERRRQQQLDAERLDSYVNADHDLYC
Sbjct: 121 EMETESDAEVECDLSNMEITEELRQYFAETERHREERRRQQQLDAERLDSYVNADHDLYC 180

Query: 181 NTRRSVEAPTERPGERRQAEMKRLYGDSAAKIQAMEAAVQLSFDKHCDRKQPKYWPVIPL 240
           NTRRSVEAPTERPGERRQAEMKRLYGDSAAKIQAMEAAVQLSFDKHCDRKQPKYWPVIPL
Sbjct: 181 NTRRSVEAPTERPGERRQAEMKRLYGDSAAKIQAMEAAVQLSFDKHCDRKQPKYWPVIPL 240

Query: 241 KF 242
           KF
Sbjct: 241 KF 242


>gi|4505257 moesin [Homo sapiens]
          Length = 577

 Score = 41.6 bits (96), Expect = 6e-04
 Identities = 38/139 (27%), Positives = 64/139 (46%), Gaps = 12/139 (8%)

Query: 97  GQHPRYSSRIQASTKEDQALSKEEEMETESDAEVECDLSNMEITEELRQYFAETERHREE 156
           G H  Y  R +  T E Q +  +   E          L N    E+ ++  AE E+ + E
Sbjct: 286 GNHELYMRRRKPDTIEVQQMKAQAREEKHQKQMERAMLEN----EKKKREMAEKEKEKIE 341

Query: 157 RRRQQQLDAERL----DSYVNADHDLYCNTRRSVEAPTERPGERRQAEMKRLYGDSAAKI 212
           R +++ +  ERL    +    A  +L   TRR++E   ER  +R Q+E ++L  +     
Sbjct: 342 REKEELM--ERLKQIEEQTKKAQQELEEQTRRALELEQER--KRAQSEAEKLAKERQEAE 397

Query: 213 QAMEAAVQLSFDKHCDRKQ 231
           +A EA +Q S D+   ++Q
Sbjct: 398 EAKEALLQASRDQKKTQEQ 416


>gi|4506467 radixin [Homo sapiens]
          Length = 583

 Score = 40.0 bits (92), Expect = 0.002
 Identities = 36/139 (25%), Positives = 64/139 (46%), Gaps = 12/139 (8%)

Query: 97  GQHPRYSSRIQASTKEDQALSKEEEMETESDAEVECDLSNMEITEELRQYFAETERHREE 156
           G H  Y  R +  T E Q +  +   E          L N    E+ ++  AE E+ R E
Sbjct: 286 GNHELYMRRRKPDTIEVQQMKAQAREEKHQKQLERAQLEN----EKKKREIAEKEKERIE 341

Query: 157 RRRQQQLDAERL----DSYVNADHDLYCNTRRSVEAPTERPGERRQAEMKRLYGDSAAKI 212
           R +++ +  ERL    +  + A  +L   TR+++E   ER  +R + E +RL  +  A  
Sbjct: 342 REKEELM--ERLKQIEEQTIKAQKELEEQTRKALELDQER--KRAKEEAERLEKERRAAE 397

Query: 213 QAMEAAVQLSFDKHCDRKQ 231
           +A  A  + + D+  +++Q
Sbjct: 398 EAKSAIAKQAADQMKNQEQ 416


>gi|239747174 PREDICTED: hypothetical protein XP_002343931, partial
           [Homo sapiens]
          Length = 213

 Score = 38.9 bits (89), Expect = 0.004
 Identities = 35/118 (29%), Positives = 50/118 (42%), Gaps = 8/118 (6%)

Query: 92  HFRRSGQHPRYSSRIQASTKEDQALSKEEEMETESDAEVECDLSNMEITEELRQYFAETE 151
           H  R  Q  R  +R       D+   K+ + E E   E E D      TE  R    ET+
Sbjct: 43  HSERDRQRDRERNR---ERDRDREREKQTDREGERQRERERDRDRQRETERERDKERETD 99

Query: 152 RHRE---ERRRQQQLDAERLDSYVNADHDLYCNTRRSVEAPTERPGERRQAEMKRLYG 206
           RH E   ER++Q++ + ER+      +        R  +  T+R  E RQAE +R  G
Sbjct: 100 RHTETDRERQKQKEREMERVRDR-EREKQKEMGRERQTDRETDRERE-RQAERERETG 155



 Score = 30.0 bits (66), Expect = 1.9
 Identities = 30/117 (25%), Positives = 49/117 (41%), Gaps = 20/117 (17%)

Query: 95  RSGQHPRYSSRIQASTKEDQA-------LSKEEEMETESDAEVECDLSNMEITEELRQYF 147
           R  Q  R   R++   +E Q          +E + E E  AE E +      TE+ R   
Sbjct: 108 RQKQKEREMERVRDREREKQKEMGRERQTDRETDRERERQAERERETGRERKTED-RHRE 166

Query: 148 AETERHREERRRQQQLDAERLDSYVNADHDLYCNTRRSVEAPTERPGER-RQAEMKR 203
            E ER RE  R+++  + ER           + +  R  +  T+R  +R R++E +R
Sbjct: 167 RERERKRERERKRETKERER-----------HTDMERERQRETDRKRDRQRESERER 212


>gi|90819233 myeloid/lymphoid or mixed-lineage leukemia (trithorax
            homolog, Drosophila); translocated to, 4 isoform 2 [Homo
            sapiens]
          Length = 1651

 Score = 38.1 bits (87), Expect = 0.007
 Identities = 33/115 (28%), Positives = 50/115 (43%), Gaps = 28/115 (24%)

Query: 101  RYSSRIQASTKEDQALSKEEEMETESDAEVECDLSNMEITEELRQYFAETERHREERRRQ 160
            ++  R+Q S ++D     E++ E E D     D+  M I + L    AE     EERRRQ
Sbjct: 1565 QFQKRLQESKQKD-----EDDEEEEDD-----DVDTMLIMQRLE---AERRARDEERRRQ 1611

Query: 161  QQLDAERLDSYVNADHDLYCNTRRSVEAPTERPGERRQAEMKRLYGDSAAKIQAM 215
            QQL+  R               +R  E    +  ERR+ E +R   D+  K+  +
Sbjct: 1612 QQLEEMR---------------KREAEDRARQEEERRRQEEERTKRDAEEKVMVL 1651


>gi|169167715 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 285

 Score = 37.7 bits (86), Expect = 0.009
 Identities = 31/113 (27%), Positives = 49/113 (43%), Gaps = 9/113 (7%)

Query: 95  RSGQHPRYSSRIQASTKEDQ-----ALSKEEEMETESDAEVECDLSNME---ITEELRQY 146
           R  +  R   R +   +E Q      + K+ E+ETE D + E ++   E     E  RQ 
Sbjct: 122 RQEERERQRDRKREKDRERQRQREIGIDKDREIETEKDRDREREMGETERYRDRERERQK 181

Query: 147 FAETERHREERRRQQQLDAER-LDSYVNADHDLYCNTRRSVEAPTERPGERRQ 198
             ET R R+  R++++ D ER  D     + D Y       +   ER  ER++
Sbjct: 182 QRETRRDRDRERQREKEDRERDRDRQKEREKDRYRERETGRDRDKERDRERQR 234



 Score = 31.6 bits (70), Expect = 0.65
 Identities = 25/112 (22%), Positives = 44/112 (39%), Gaps = 3/112 (2%)

Query: 95  RSGQHPRYSSRIQASTK---EDQALSKEEEMETESDAEVECDLSNMEITEELRQYFAETE 151
           R  Q  R   R +A  +   +D+ + K+ + + + D E +         E       ETE
Sbjct: 60  RERQRERERQRKRAKERHREKDREIEKDRDRQRKRDRERQRWRDRDRKRERWGDRDRETE 119

Query: 152 RHREERRRQQQLDAERLDSYVNADHDLYCNTRRSVEAPTERPGERRQAEMKR 203
             R+E R +Q+      D       ++  +  R +E   +R  ER   E +R
Sbjct: 120 TERQEERERQRDRKREKDRERQRQREIGIDKDREIETEKDRDREREMGETER 171


>gi|210032790 hypothetical protein LOC27146 [Homo sapiens]
          Length = 1060

 Score = 37.7 bits (86), Expect = 0.009
 Identities = 28/118 (23%), Positives = 56/118 (47%), Gaps = 6/118 (5%)

Query: 99  HPRYSSRIQASTKEDQALSKEEEMETESDAEVECDLSNMEITEELRQYFAETERHREERR 158
           HP+     Q+  KE   +    +M+T+ +A  E +    +  E+LR+   +TE   EE++
Sbjct: 369 HPQQD---QSCLKECPCMKGGTDMQTKKEASAETEYMKQQYEEDLRKIKHQTE---EEKK 422

Query: 159 RQQQLDAERLDSYVNADHDLYCNTRRSVEAPTERPGERRQAEMKRLYGDSAAKIQAME 216
             +    +RL+  V        + R SVEA  ++     +A+++ +   S  +I+ +E
Sbjct: 423 HLKDQLVKRLEDLVKKHTVEIKSVRSSVEAERKKLQREVEAQLEEVRKKSEKEIKQLE 480


>gi|56549694 enabled homolog isoform a [Homo sapiens]
          Length = 591

 Score = 37.0 bits (84), Expect = 0.015
 Identities = 29/116 (25%), Positives = 50/116 (43%), Gaps = 12/116 (10%)

Query: 105 RIQASTKEDQALSKEEEMETESDAEVECDLSNMEITEELRQYFAETERHREERRRQQQLD 164
           R +   +  + L ++E +E +   E +  L       + R+     ER R+ER RQ+QL+
Sbjct: 193 RERQERERQERLERQERLERQERLERQERLDRERQERQERERLERLERERQERERQEQLE 252

Query: 165 AERLDSYVNADHDLYCNTRRSVEAPTERPGERRQAEMKRLYGDSAAKIQAMEAAVQ 220
            E+L+ +             SVE P           +  + GDS+A    ++AA Q
Sbjct: 253 REQLE-WERERRISSAAAPASVETP-----------LNSVLGDSSASEPGLQAASQ 296



 Score = 27.7 bits (60), Expect = 9.4
 Identities = 25/102 (24%), Positives = 43/102 (42%), Gaps = 3/102 (2%)

Query: 105 RIQASTKEDQALSKEEEMETESDAEVECDLSNMEITEELRQYFAETERHREERRRQQQLD 164
           ++Q   ++ +   +  E E      +E +    E  E  R    + ER R+ER RQ++L+
Sbjct: 146 QLQEQQRQKELERERLERERMERERLERERLERERLERERLEQEQLERERQERERQERLE 205

Query: 165 -AERLDSYVNADHDLYCNTRRSVEAPTERPG--ERRQAEMKR 203
             ERL+     +     +  R      ER    ER + E +R
Sbjct: 206 RQERLERQERLERQERLDRERQERQERERLERLERERQERER 247


>gi|39930375 enabled homolog isoform b [Homo sapiens]
          Length = 570

 Score = 37.0 bits (84), Expect = 0.015
 Identities = 29/116 (25%), Positives = 50/116 (43%), Gaps = 12/116 (10%)

Query: 105 RIQASTKEDQALSKEEEMETESDAEVECDLSNMEITEELRQYFAETERHREERRRQQQLD 164
           R +   +  + L ++E +E +   E +  L       + R+     ER R+ER RQ+QL+
Sbjct: 193 RERQERERQERLERQERLERQERLERQERLDRERQERQERERLERLERERQERERQEQLE 252

Query: 165 AERLDSYVNADHDLYCNTRRSVEAPTERPGERRQAEMKRLYGDSAAKIQAMEAAVQ 220
            E+L+ +             SVE P           +  + GDS+A    ++AA Q
Sbjct: 253 REQLE-WERERRISSAAAPASVETP-----------LNSVLGDSSASEPGLQAASQ 296



 Score = 27.7 bits (60), Expect = 9.4
 Identities = 25/102 (24%), Positives = 43/102 (42%), Gaps = 3/102 (2%)

Query: 105 RIQASTKEDQALSKEEEMETESDAEVECDLSNMEITEELRQYFAETERHREERRRQQQLD 164
           ++Q   ++ +   +  E E      +E +    E  E  R    + ER R+ER RQ++L+
Sbjct: 146 QLQEQQRQKELERERLERERMERERLERERLERERLERERLEQEQLERERQERERQERLE 205

Query: 165 -AERLDSYVNADHDLYCNTRRSVEAPTERPG--ERRQAEMKR 203
             ERL+     +     +  R      ER    ER + E +R
Sbjct: 206 RQERLERQERLERQERLDRERQERQERERLERLERERQERER 247


>gi|148746195 trichohyalin [Homo sapiens]
          Length = 1943

 Score = 37.0 bits (84), Expect = 0.015
 Identities = 26/93 (27%), Positives = 46/93 (49%), Gaps = 6/93 (6%)

Query: 111 KEDQALSKEEEMETESDAEVECDLSNMEITEELRQYFAETERHREERRRQQQLDAERLDS 170
           KE++ L +EE        E E  L  +E  +ELR+   E E+ ++  RR+QQL  ++ + 
Sbjct: 255 KEEEKLQEEEPQRQRELQEEEEQLRKLE-RQELRRERQEEEQQQQRLRREQQLRRKQEEE 313

Query: 171 YVNADHDLYCNTRRSVEAPTERPGERRQAEMKR 203
                 +     RR  +   E+  ERR+ +++R
Sbjct: 314 RREQQEE-----RREQQERREQQEERREQQLRR 341



 Score = 36.2 bits (82), Expect = 0.026
 Identities = 33/141 (23%), Positives = 61/141 (43%), Gaps = 13/141 (9%)

Query: 94   RRSGQHPRYSSRIQASTKEDQALSKEEEMETESDAEVECDLSNMEITEELRQYFAETERH 153
            RR     +Y    +   +E+Q L +E E     + E +C        EEL+Q   E +  
Sbjct: 1072 RRQELERQYRKEEELQQEEEQLLREEPEKRRRQERERQC-----REEEELQQ--EEEQLL 1124

Query: 154  REERRRQQQLDAERLDSYVNADHDLYCNTRRSVEAPTERPGERRQAEMKRLYGDSAAKIQ 213
            REER ++++ + ER   Y   +       +   +   E P +RR+ E++R Y +     Q
Sbjct: 1125 REEREKRRRQELER--QYREEEE----VQQEEEQLLREEPEKRRRQELERQYREEEELQQ 1178

Query: 214  AMEAAVQLSFDKHCDRKQPKY 234
              E  ++   +K    ++ +Y
Sbjct: 1179 EEEQLLREEQEKRRQERERQY 1199



 Score = 35.4 bits (80), Expect = 0.045
 Identities = 32/134 (23%), Positives = 58/134 (43%), Gaps = 7/134 (5%)

Query: 105 RIQASTKEDQALSKEEEMETESDAEVECDLSNMEITEELRQYFA----ETERHREERRRQ 160
           R Q   +E Q   ++EE   E   E E     ++  +E R+ +     ETERH +ERR+Q
Sbjct: 415 REQQLRREQQLRREQEEERHEQKHEQERREQRLKREQEERRDWLKREEETERHEQERRKQ 474

Query: 161 Q---QLDAERLDSYVNADHDLYCNTRRSVEAPTERPGERRQAEMKRLYGDSAAKIQAMEA 217
           Q     + ER + ++  + +     +   E    R  E R+ +  +   +     Q + +
Sbjct: 475 QLKRDQEEERRERWLKLEEEERREQQERREQQLRREQEERREQRLKRQEEEERLQQRLRS 534

Query: 218 AVQLSFDKHCDRKQ 231
             QL  ++   R+Q
Sbjct: 535 EQQLRREQEERREQ 548



 Score = 35.4 bits (80), Expect = 0.045
 Identities = 32/138 (23%), Positives = 58/138 (42%), Gaps = 16/138 (11%)

Query: 98  QHPRYSSRIQASTKE--DQALSKEEEMETESDAEVECDLSNMEITEELRQYFAETERHRE 155
           +  R   R++   +E  +Q L +EE    E +   E  L   E  EE RQ   ++E   E
Sbjct: 582 EEERRQQRLKREQEERLEQRLKREEVERLEQEERREQRLKREEPEEERRQQLLKSEEQEE 641

Query: 156 ER----------RRQQQL----DAERLDSYVNADHDLYCNTRRSVEAPTERPGERRQAEM 201
            R          RR+Q+L    + ERL+  +  +H+     +   E   E+  ER ++ +
Sbjct: 642 RRQQQLRREQQERREQRLKREEEEERLEQRLKREHEEERREQELAEEEQEQARERIKSRI 701

Query: 202 KRLYGDSAAKIQAMEAAV 219
            +      ++  A ++ V
Sbjct: 702 PKWQWQLESEADARQSKV 719



 Score = 30.8 bits (68), Expect = 1.1
 Identities = 30/145 (20%), Positives = 59/145 (40%), Gaps = 20/145 (13%)

Query: 95   RSGQHPRYSSRIQASTKEDQALSKEEEMETESDAEVECDLSNMEITEELRQYFAETERHR 154
            R     R    ++   +E++ L +EEE     + E           E  RQY  E E  R
Sbjct: 1155 REEPEKRRRQELERQYREEEELQQEEEQLLREEQEKRRQ-------ERERQYREEEELQR 1207

Query: 155  EERRRQQQLDAERLD-------SYVNA--DHDLYCNTRRSVE----APTERPGERRQAEM 201
            ++R+++ + + +R D          NA  D+ +YC  R + +      ++    + Q ++
Sbjct: 1208 QKRKQRYRDEDQRSDLKWQWEPEKENAVRDNKVYCKGRENEQFRQLEDSQLRDRQSQQDL 1267

Query: 202  KRLYGDSAAKIQAMEAAVQLSFDKH 226
            + L G+   + +  E       D+H
Sbjct: 1268 QHLLGEQQERDREQERRRWQQRDRH 1292



 Score = 30.4 bits (67), Expect = 1.4
 Identities = 25/108 (23%), Positives = 43/108 (39%), Gaps = 6/108 (5%)

Query: 94   RRSGQHPRYSSRIQASTKEDQALSKEEEMETESDAEVECDLSNMEITEELRQYFAETERH 153
            RR  +  +Y    +   KE+Q L +E E     + E           EEL+Q   +  R 
Sbjct: 952  RRQERERQYRKDKKLQQKEEQLLGEEPEKRRRQERE-----KKYREEEELQQEEEQLLRE 1006

Query: 154  REERRRQQQLDAE-RLDSYVNADHDLYCNTRRSVEAPTERPGERRQAE 200
              E+RR+Q+ + + R    +  + +      R      ER  + R+ E
Sbjct: 1007 EREKRRRQEWERQYRKKDELQQEEEQLLREEREKRRLQERERQYREEE 1054



 Score = 30.0 bits (66), Expect = 1.9
 Identities = 31/135 (22%), Positives = 60/135 (44%), Gaps = 9/135 (6%)

Query: 94   RRSGQHPRYSS-RIQASTKEDQALSKEEEMETESDAEVECDLSNME--ITEELRQYFAET 150
            R+  +H  Y+   +Q   +++Q L +EEE E + +   +      E    EE +    E 
Sbjct: 882  RKRRRHTLYAKPALQEQLRKEQQLLQEEEEELQREEREKRRRQEQERQYREEEQLQQEEE 941

Query: 151  ERHREERRRQQQLDAERLDSYVNADHDLYCNTRRSVEAPTERPGERRQAEMKRLYGDSAA 210
            +  REER ++++ + ER       D  L    ++  +   E P +RR+ E ++ Y +   
Sbjct: 942  QLLREEREKRRRQERER---QYRKDKKL---QQKEEQLLGEEPEKRRRQEREKKYREEEE 995

Query: 211  KIQAMEAAVQLSFDK 225
              Q  E  ++   +K
Sbjct: 996  LQQEEEQLLREEREK 1010



 Score = 29.6 bits (65), Expect = 2.5
 Identities = 24/107 (22%), Positives = 47/107 (43%), Gaps = 10/107 (9%)

Query: 105 RIQASTKEDQALSKEEE------METESDAEVECDLSNMEITEELRQYFAETERHREERR 158
           R+Q   + +Q L +E+E      ++ E +  +E +     +  E  +   +  +  EERR
Sbjct: 527 RLQQRLRSEQQLRREQEERREQLLKREEEKRLEQERREQRLKREQEERRDQLLKREEERR 586

Query: 159 RQ--QQLDAERLDSYVNAD--HDLYCNTRRSVEAPTERPGERRQAEM 201
           +Q  ++   ERL+  +  +    L    RR      E P E R+ ++
Sbjct: 587 QQRLKREQEERLEQRLKREEVERLEQEERREQRLKREEPEEERRQQL 633



 Score = 28.9 bits (63), Expect = 4.2
 Identities = 22/101 (21%), Positives = 42/101 (41%), Gaps = 1/101 (0%)

Query: 103 SSRIQASTKEDQALSKEEEMETESDAEVECDLSNMEITEELRQYFAETERHREERRRQQQ 162
           + R +   ++ Q    +EE   E   ++E +    E  E   Q     +  R E+R ++Q
Sbjct: 464 TERHEQERRKQQLKRDQEEERRERWLKLE-EEERREQQERREQQLRREQEERREQRLKRQ 522

Query: 163 LDAERLDSYVNADHDLYCNTRRSVEAPTERPGERRQAEMKR 203
            + ERL   + ++  L        E   +R  E+R  + +R
Sbjct: 523 EEEERLQQRLRSEQQLRREQEERREQLLKREEEKRLEQERR 563



 Score = 28.5 bits (62), Expect = 5.5
 Identities = 26/99 (26%), Positives = 39/99 (39%), Gaps = 19/99 (19%)

Query: 107 QASTKEDQALSKEEEMETESDAEVECDLSNMEITEELR--QYFAETERHREERRRQQQLD 164
           Q   +E Q   K+EE   E   E        E  EE R  Q   E E  RE++ R++Q +
Sbjct: 298 QRLRREQQLRRKQEEERREQQEERREQQERREQQEERREQQLRREQEERREQQLRREQEE 357

Query: 165 AERLDSYVNADHDLYCNTRRSVEAPTERPGERRQAEMKR 203
                             RR  +   E+  ERR+ +++R
Sbjct: 358 -----------------ERREQQLRREQEEERREQQLRR 379



 Score = 28.1 bits (61), Expect = 7.2
 Identities = 30/123 (24%), Positives = 51/123 (41%), Gaps = 13/123 (10%)

Query: 94  RRSGQHPRYSSRIQASTKE--DQALSKEEEMETESDA---EVECDLSNMEITEELRQYFA 148
           RR  Q  R   +++   +E  +Q L +E+E E        E E +    ++  E +    
Sbjct: 327 RREQQEERREQQLRREQEERREQQLRREQEEERREQQLRREQEEERREQQLRREQQLRRE 386

Query: 149 ETERHREERRRQQQLDAE---RLDSYVNADHDLYCNTRRSVEAPTER-----PGERRQAE 200
           +  R  ++ RR+QQL  E   R +  +  +  L    +   E   ER       ERR+  
Sbjct: 387 QQLRREQQLRREQQLRREQQLRREQQLRREQQLRREQQLRREQEEERHEQKHEQERREQR 446

Query: 201 MKR 203
           +KR
Sbjct: 447 LKR 449



 Score = 28.1 bits (61), Expect = 7.2
 Identities = 25/116 (21%), Positives = 46/116 (39%), Gaps = 3/116 (2%)

Query: 111  KEDQALSKEEEMETESDAEVECDLSNMEITEELRQYFAETERHREERRRQQQLDAERLDS 170
            +E+Q L ++E      + E+       +  EE  Q     ER R+  + +QQL  +  + 
Sbjct: 1348 REEQPLRRQERDRKFREEELRHQEQGRKFLEE-EQRLRRQERERKFLKEEQQLRCQEREQ 1406

Query: 171  YVNADHDLYCNTRRSVEAPTERPGERRQAEMKRLYGDSAAKIQAMEAAVQLSFDKH 226
             +  D D          +  ER  + R+ E +    +   K   +E   QL  ++H
Sbjct: 1407 QLRQDRDRKFREEEQQLSRQERDRKFREEEQQVRRQERERKF--LEEEQQLRQERH 1460



 Score = 27.7 bits (60), Expect = 9.4
 Identities = 21/101 (20%), Positives = 44/101 (43%), Gaps = 3/101 (2%)

Query: 105 RIQASTKEDQALSKEEEMETESDAEVECDLSNMEITEELRQYFAETERHREERRRQ--QQ 162
           R +   + +Q L +E+++  E     E  L   +     ++     ++H +ERR Q  ++
Sbjct: 390 RREQQLRREQQLRREQQLRREQQLRREQQLRREQQLRREQEEERHEQKHEQERREQRLKR 449

Query: 163 LDAERLDSYVNADH-DLYCNTRRSVEAPTERPGERRQAEMK 202
              ER D     +  + +   RR  +   ++  ERR+  +K
Sbjct: 450 EQEERRDWLKREEETERHEQERRKQQLKRDQEEERRERWLK 490


>gi|68299759 ecotropic viral integration site 5 [Homo sapiens]
          Length = 810

 Score = 36.6 bits (83), Expect = 0.020
 Identities = 28/113 (24%), Positives = 48/113 (42%), Gaps = 21/113 (18%)

Query: 89  SSSHFRRSGQHP-RYSSRIQASTKEDQALSKEEEMETESDAEVEC------------DLS 135
           +S+H RR+ Q       ++Q  + +++ L  +        AE+EC            +  
Sbjct: 597 NSNHLRRAEQEVISLQEKVQYLSAQNKGLLTQLSEAKRKQAEIECKNKEEVMAVRLREAD 656

Query: 136 NMEITEELRQYFAETERHREERRRQQQLD--------AERLDSYVNADHDLYC 180
           ++    ELRQ+ AE E  +EE + Q QL+         E  D     +H+L C
Sbjct: 657 SIAAVAELRQHIAELEIQKEEGKLQGQLNKSDSNQYIGELKDQIAELNHELRC 709


>gi|239757964 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 290

 Score = 35.8 bits (81), Expect = 0.034
 Identities = 34/115 (29%), Positives = 53/115 (46%), Gaps = 10/115 (8%)

Query: 95  RSGQHPRYSSRIQASTKE-DQALSKEEEMETESDAEVECDLSNMEITEELRQYFAETERH 153
           R  Q  R   R +   +E D+   KE E +TE D + + +      TE  R    E ++ 
Sbjct: 127 REKQKGRERERDRGRERERDRDREKERERQTEKDRDGQRETE----TERERDREREKQKE 182

Query: 154 RE-ERRRQQQLDAER-LDSYVNADHDLYCNTRRSVEAPTERPGER---RQAEMKR 203
           RE ER R +Q D E+  +   + + D    T+   +  T+R GER   R+ E +R
Sbjct: 183 RETERDRDRQRDTEKERERQTDRERDRQRKTQTERQRETDREGERETDRRRERQR 237


>gi|197333879 genetic suppressor element 1 isoform 2 [Homo sapiens]
          Length = 1113

 Score = 35.8 bits (81), Expect = 0.034
 Identities = 43/159 (27%), Positives = 65/159 (40%), Gaps = 21/159 (13%)

Query: 11  ATRPWYSHPVYARYWQHYHQAMAWMQSHHNAYRKAVESCFNLPWYLPSALLPQSSYDNEA 70
           AT   Y HP Y       H A     S+      A+ S F  P   P +L P        
Sbjct: 140 ATAAAYYHPSYLAPHPFPHPAFRMDDSY---CLSALRSPF-YPIPTPGSLPP-------- 187

Query: 71  AYPQSFYDHHVAWQDYPCSSSHFRRSGQHPRYSSRIQASTKE-DQALSKEEEMETESDAE 129
            +P + +  H++   YP   SH   +  H    S + A   + D+ L +E E E E + E
Sbjct: 188 LHPSAMH-LHLSGVRYPPELSHSSLAALHSERMSGLSAERLQMDEELRRERERERERERE 246

Query: 130 VECDLSNMEITEELRQYFAETERHRE-ERRRQQQLDAER 167
            E D       E  ++   E E+ RE E+ R+++ + ER
Sbjct: 247 READ------REREKEREREREKEREQEKEREREKERER 279


>gi|44955926 genetic suppressor element 1 isoform 1 [Homo sapiens]
          Length = 1217

 Score = 35.8 bits (81), Expect = 0.034
 Identities = 43/159 (27%), Positives = 65/159 (40%), Gaps = 21/159 (13%)

Query: 11  ATRPWYSHPVYARYWQHYHQAMAWMQSHHNAYRKAVESCFNLPWYLPSALLPQSSYDNEA 70
           AT   Y HP Y       H A     S+      A+ S F  P   P +L P        
Sbjct: 244 ATAAAYYHPSYLAPHPFPHPAFRMDDSY---CLSALRSPF-YPIPTPGSLPP-------- 291

Query: 71  AYPQSFYDHHVAWQDYPCSSSHFRRSGQHPRYSSRIQASTKE-DQALSKEEEMETESDAE 129
            +P + +  H++   YP   SH   +  H    S + A   + D+ L +E E E E + E
Sbjct: 292 LHPSAMH-LHLSGVRYPPELSHSSLAALHSERMSGLSAERLQMDEELRRERERERERERE 350

Query: 130 VECDLSNMEITEELRQYFAETERHRE-ERRRQQQLDAER 167
            E D       E  ++   E E+ RE E+ R+++ + ER
Sbjct: 351 READ------REREKEREREREKEREQEKEREREKERER 383


>gi|15721939 metastatic lymph node 51 [Homo sapiens]
          Length = 703

 Score = 35.4 bits (80), Expect = 0.045
 Identities = 32/124 (25%), Positives = 49/124 (39%), Gaps = 16/124 (12%)

Query: 117 SKEEEMETESDAEVECDLSNMEITEELRQYFAETERHREERRRQQQLDAERLDSYVNADH 176
           ++E E E+E   E +  LS+ E  E+      E   + EE   + +L +E  D+      
Sbjct: 72  AEESECESEDGIEGDAVLSDYESAEDSE---GEEGEYSEEENSKVELKSEANDAV----- 123

Query: 177 DLYCNTRRSVEAPTERPGERRQAEMKRLYGDSAAKIQAMEAAVQLSFDKHC----DRKQP 232
               N+    E   E+P  +     +R  GD     + +E  V     KH     DRK P
Sbjct: 124 ----NSSTKEEKGEEKPDTKSTVTGERQSGDGQESTEPVENKVGKKGPKHLDDDEDRKNP 179

Query: 233 KYWP 236
            Y P
Sbjct: 180 AYIP 183


>gi|102467242 inner centromere protein antigens 135/155kDa isoform 2
           [Homo sapiens]
          Length = 914

 Score = 35.4 bits (80), Expect = 0.045
 Identities = 30/113 (26%), Positives = 49/113 (43%), Gaps = 6/113 (5%)

Query: 105 RIQASTKEDQALSKEEEMETESDAEVECDLSNMEITEELRQYFAETERHREERRRQQQLD 164
           R+    KE Q L   E +  + +AE    L   ++ E+ R+   E +  REER R+    
Sbjct: 527 RMDPKEKERQRL---ENLRRKEEAE---QLRRQKVEEDKRRRLEEVKLKREERLRKVLQA 580

Query: 165 AERLDSYVNADHDLYCNTRRSVEAPTERPGERRQAEMKRLYGDSAAKIQAMEA 217
            ER++                ++  TE+  E R AE K     +A K++ +EA
Sbjct: 581 RERVEQMKEEKKKQIEQKFAQIDEKTEKAKEERLAEEKAKKKAAAKKMEEVEA 633



 Score = 33.1 bits (74), Expect = 0.22
 Identities = 30/114 (26%), Positives = 44/114 (38%), Gaps = 16/114 (14%)

Query: 118 KEEEMETESDAEVECDLSNMEITEELRQYFAETERHREERRRQQQLDAERLDSYVNADHD 177
           KEEE E    A     L+     E   Q   E ER  +ERR Q++ + E           
Sbjct: 664 KEEEQERLRKAAEAKRLAEQREQERREQERREQERREQERREQERREQE----------- 712

Query: 178 LYCNTRRSVEAPTERPGERRQAEMKRLYGDSAAKIQAMEAAVQLSFDKHCDRKQ 231
                R+  E    R  ER QAE +    + A ++Q  +   +L   K  + +Q
Sbjct: 713 -----RQLAEQERRREQERLQAERELQEREKALRLQKEQLQRELEEKKKKEEQQ 761



 Score = 28.9 bits (63), Expect = 4.2
 Identities = 16/74 (21%), Positives = 35/74 (47%)

Query: 94  RRSGQHPRYSSRIQASTKEDQALSKEEEMETESDAEVECDLSNMEITEELRQYFAETERH 153
           RR  +      R Q   ++++ L+++E    +   + E +L   E    L++   + E  
Sbjct: 693 RREQERREQERREQERREQERQLAEQERRREQERLQAERELQEREKALRLQKEQLQRELE 752

Query: 154 REERRRQQQLDAER 167
            ++++ +QQ  AER
Sbjct: 753 EKKKKEEQQRLAER 766


>gi|7662238 apoptotic chromatin condensation inducer 1 [Homo sapiens]
          Length = 1341

 Score = 35.0 bits (79), Expect = 0.059
 Identities = 19/70 (27%), Positives = 31/70 (44%)

Query: 98   QHPRYSSRIQASTKEDQALSKEEEMETESDAEVECDLSNMEITEELRQYFAETERHREER 157
            QHPR   R Q     +Q   +E EME       E +    ++ E  R      +R R+ER
Sbjct: 1129 QHPRAEQREQERAVREQWAEREREMERRERTRSEREWDRDKVREGPRSRSRSRDRRRKER 1188

Query: 158  RRQQQLDAER 167
             + ++  +E+
Sbjct: 1189 AKSKEKKSEK 1198



 Score = 28.5 bits (62), Expect = 5.5
 Identities = 30/130 (23%), Positives = 58/130 (44%), Gaps = 24/130 (18%)

Query: 100  PRYSSRIQASTKEDQALSKEEEMETESDAEVE---------------------CDLSNME 138
            PR  SR +   ++++A SKE++ E +  A+ E                       L++ +
Sbjct: 1174 PRSRSRSRDRRRKERAKSKEKKSEKKEKAQEEPPAKLLDDLFRKTKAAPCIYWLPLTDSQ 1233

Query: 139  ITEELRQYFAETERHREERRRQQQLDAERLDSYVNADHDLYCNTRRSVEAPTERPGER-R 197
            I ++  +  AE  + RE+RR++Q+ + E+ +    A+ +      R       R  +R R
Sbjct: 1234 IVQKEAER-AERAKEREKRRKEQE-EEEQKEREKEAERERNRQLEREKRREHSRERDRER 1291

Query: 198  QAEMKRLYGD 207
            + E +R  GD
Sbjct: 1292 ERERERDRGD 1301


>gi|21396500 HIRA interacting protein 3 [Homo sapiens]
          Length = 556

 Score = 35.0 bits (79), Expect = 0.059
 Identities = 30/130 (23%), Positives = 58/130 (44%), Gaps = 5/130 (3%)

Query: 107 QASTKEDQALSKEEEMETESDAEVECDLSNMEITEELRQYFAETERH----REERRRQQQ 162
           +AS    QA  + EE E E        +   + T+ L++   E+E      ++E+R ++ 
Sbjct: 184 KASVSRKQAREESEESEAEPVQRTAKKVEGNKGTKSLKESEQESEEEILAQKKEQREEEV 243

Query: 163 LDAERLDSYVNADHDLYCNTRRSVEAPTERPGERRQAEMKRLYGDSAAKIQAMEAAVQLS 222
            + E+ +     D      +    ++  E    +++++ KRL GDS ++ +  EAA    
Sbjct: 244 EEEEKEEDEEKGDWKPRTRSNGRRKSAREERSCKQKSQAKRLLGDSDSEEEQKEAA-SSG 302

Query: 223 FDKHCDRKQP 232
            D   DR+ P
Sbjct: 303 DDSGRDREPP 312


>gi|71143123 U11/U12 snRNP 48K [Homo sapiens]
          Length = 339

 Score = 34.7 bits (78), Expect = 0.077
 Identities = 39/154 (25%), Positives = 59/154 (38%), Gaps = 20/154 (12%)

Query: 60  LLPQSSYDNEAAYPQSFYDHHVAWQDYPCSSSHFRRSGQHPRYSSR-------IQASTKE 112
           L  + + DN    P+S+ +     +DY      +R    H    S        I    +E
Sbjct: 192 LAAKINQDNSRKSPKSYLEILAEVRDYKRRRQSYRAKNVHITKKSYTEVIRDVINVHMEE 251

Query: 113 DQALSKEEEMETESDAEV--ECDLSNMEITEELRQYF-AETERHREERRRQQQLDAERLD 169
                +EE+ + E DAE   E   ++++  +    Y  AE  RHR +R R          
Sbjct: 252 LSNHWQEEQEKAEDDAEKNEERRSASVDSRQSGGSYLDAECSRHRRDRSRSPHKRKR--- 308

Query: 170 SYVNADHDLYCNTRRSVEAPTERPGERRQAEMKR 203
              N D D  C +RR      ER GER  +  +R
Sbjct: 309 ---NKDKDKNCESRRR----KERDGERHHSHKRR 335


>gi|239747134 PREDICTED: hypothetical protein XP_002343921 [Homo
           sapiens]
          Length = 600

 Score = 34.3 bits (77), Expect = 0.10
 Identities = 31/112 (27%), Positives = 45/112 (40%), Gaps = 18/112 (16%)

Query: 95  RSGQHPRYSSRIQASTKEDQALSKEEEMETESDAEVECDLSNMEITEELRQYFAETERHR 154
           R  +  R   R + +  ED+   +  E E E + E E +       E  RQ   +TER R
Sbjct: 185 RQERRERERQREKENKTEDRHSERGRERERERETETETERKRQTDRERDRQ--RKTERER 242

Query: 155 E---ERRRQQQLDAERLDSYVNADHDLYCNTRRSVEAPTERPGERRQAEMKR 203
           E   ER R  + + ER             +  R  E   +R  +RRQ E +R
Sbjct: 243 EKQAERERASERETER-------------DKERERERDRDRDRDRRQKERER 281



 Score = 32.7 bits (73), Expect = 0.29
 Identities = 35/119 (29%), Positives = 52/119 (43%), Gaps = 16/119 (13%)

Query: 94  RRSGQHPRYSSRI-QASTKEDQALSKEEEMETESDAEVECDLSNMEITEELRQYFA--ET 150
           RR  +  R + R  Q  T+ D+   ++ E + E + E E +       E  R+     ET
Sbjct: 274 RRQKERERQTDRKRQRRTERDRETERKRERQRERERERERNRKRERERERERERERQRET 333

Query: 151 ERHRE-----ERRRQQQLDAERLDSYVNADHDLYCNTRRSVEAPTERPGER-RQAEMKR 203
           ER RE     +R+RQ ++D ER       +       RR  E   ER  ER RQ+  +R
Sbjct: 334 ERDREKERERKRKRQTEMDRER-------NRQTGREGRRQAERERERERERDRQSARER 385



 Score = 30.0 bits (66), Expect = 1.9
 Identities = 32/123 (26%), Positives = 53/123 (43%), Gaps = 19/123 (15%)

Query: 94  RRSGQHPRYSSRIQASTKE-----DQALSKEEEMETESDAEVECDLSNMEITEELRQYFA 148
           +R  +  R   R + + +E     D+    + E E + DAE E +      T+  RQ   
Sbjct: 116 QREKERNRQKERERETEREGERGRDRQTDGQRERERQRDAEKERERQ----TDRERQ--R 169

Query: 149 ETERHRE-----ERRRQQQLDAERLDSYVNADHDLYCNTRRSVEAPTERPGE---RRQAE 200
           +TER+R+     E+ RQ++ + ER     N   D +    R  E   E   E   +RQ +
Sbjct: 170 QTERNRQKEREREKNRQERRERERQREKENKTEDRHSERGRERERERETETETERKRQTD 229

Query: 201 MKR 203
            +R
Sbjct: 230 RER 232



 Score = 30.0 bits (66), Expect = 1.9
 Identities = 21/76 (27%), Positives = 36/76 (47%), Gaps = 3/76 (3%)

Query: 95  RSGQHPRYSSRIQASTKEDQALSKEEEMETESDAEVECDLSNMEITEELRQYFA--ETER 152
           R  +  R   R  A  +E++   ++ + + E + + E D      TE+ R+     E+ER
Sbjct: 369 RERERERERDRQSAREREERERDRDRDRQKERERQTEKDRDGQRETEKQREREKDRESER 428

Query: 153 HREE-RRRQQQLDAER 167
            RE  R R++Q   ER
Sbjct: 429 GRERGREREKQKGRER 444



 Score = 29.6 bits (65), Expect = 2.5
 Identities = 25/98 (25%), Positives = 46/98 (46%), Gaps = 8/98 (8%)

Query: 112 EDQALSKEEEMETESD---AEVECDLSNMEITEELRQYFAETERHREERRRQQQLDAERL 168
           +D+  ++++E E   +    E E D       E+ R    + +RHRE +R +++    + 
Sbjct: 52  DDRERNRQKERERRREKRQTERETDRKRERRREKDRH--RKRDRHRERQRDREKERERQT 109

Query: 169 DSYVNADHDLYCNTRRSVEAPTERPGER---RQAEMKR 203
           D   +   +   N ++  E  TER GER   RQ + +R
Sbjct: 110 DRERDRQREKERNRQKERERETEREGERGRDRQTDGQR 147



 Score = 29.3 bits (64), Expect = 3.2
 Identities = 28/114 (24%), Positives = 49/114 (42%), Gaps = 15/114 (13%)

Query: 97  GQHPRYSSRIQASTKEDQALSKEEEMETESDAEVECDLSNMEITEELRQYFAETERHREE 156
           GQ  R   R  A  + ++   +E + +TE + + E +       E+ RQ   E ER RE+
Sbjct: 145 GQRERERQR-DAEKERERQTDRERQRQTERNRQKERE------REKNRQERRERERQREK 197

Query: 157 RRRQQQLDAER-------LDSYVNADHDLYCNTRRSVEAPTERPGERRQAEMKR 203
             + +   +ER        ++    +     +  R  +  TER  E +QAE +R
Sbjct: 198 ENKTEDRHSERGRERERERETETETERKRQTDRERDRQRKTERERE-KQAERER 250


>gi|122937247 unc-13 homolog A [Homo sapiens]
          Length = 1791

 Score = 34.3 bits (77), Expect = 0.10
 Identities = 41/219 (18%), Positives = 79/219 (36%), Gaps = 34/219 (15%)

Query: 26  QHYHQAMAWMQSHHNAYRKAVESCFNLPWYLPSALLPQSSYDNEAAYP------QSFYDH 79
           QH     + +    + YR    +    P+Y  S   P +S    +  P      +S+ D 
Sbjct: 273 QHNDDPDSAVDDRDSDYRSETSNSIPPPYYTTSQ--PNASVHQYSVRPPPLGSRESYSDS 330

Query: 80  HVAWQDY-------PCSSSHFRRSGQHPRYSSRIQASTKEDQALSKEEEMETESDAE--- 129
             +++++       P  SS +  SG+  + SS++      D+   +  +ME E D +   
Sbjct: 331 MHSYEEFSEPQALSPTGSSRYASSGELSQGSSQLSEDFDPDEHSLQGSDMEDERDRDSYH 390

Query: 130 ------------VECDLSNMEITEELRQYFAETE--RHREERRRQQQLDAERLDSYVNAD 175
                          D    E+ E+L  +  E E     EE   +++   + L SY   +
Sbjct: 391 SCHSSVSYHKDSPRWDQDEEELEEDLEDFLEEEELPEDEEELEEEEEEVPDDLGSYAQRE 450

Query: 176 HDLYCNTR--RSVEAPTERPGERRQAEMKRLYGDSAAKI 212
                  +  + +  P   PG+  +A +        AK+
Sbjct: 451 DVAVAEPKDFKRISLPPAAPGKEDKAPVAPTEAPDMAKV 489


>gi|215490056 meningioma expressed antigen 5 (hyaluronidase) isoform
           b [Homo sapiens]
          Length = 863

 Score = 33.9 bits (76), Expect = 0.13
 Identities = 16/81 (19%), Positives = 36/81 (44%)

Query: 113 DQALSKEEEMETESDAEVECDLSNMEITEELRQYFAETERHREERRRQQQLDAERLDSYV 172
           D  + K+EE + ++D ++  ++   ++ EEL+    + E   E +  +  +  + +    
Sbjct: 413 DMVVEKQEETDHKNDNQILSEIVEAKMAEELKPMDTDKESIAESKSPEMSMQEDCISDIA 472

Query: 173 NADHDLYCNTRRSVEAPTERP 193
               D   N  + V  P E+P
Sbjct: 473 PMQTDEQTNKEQFVPGPNEKP 493


>gi|11024698 meningioma expressed antigen 5 (hyaluronidase) isoform
           a [Homo sapiens]
          Length = 916

 Score = 33.9 bits (76), Expect = 0.13
 Identities = 16/81 (19%), Positives = 36/81 (44%)

Query: 113 DQALSKEEEMETESDAEVECDLSNMEITEELRQYFAETERHREERRRQQQLDAERLDSYV 172
           D  + K+EE + ++D ++  ++   ++ EEL+    + E   E +  +  +  + +    
Sbjct: 466 DMVVEKQEETDHKNDNQILSEIVEAKMAEELKPMDTDKESIAESKSPEMSMQEDCISDIA 525

Query: 173 NADHDLYCNTRRSVEAPTERP 193
               D   N  + V  P E+P
Sbjct: 526 PMQTDEQTNKEQFVPGPNEKP 546


>gi|102467235 inner centromere protein antigens 135/155kDa isoform 1
           [Homo sapiens]
          Length = 918

 Score = 33.9 bits (76), Expect = 0.13
 Identities = 29/107 (27%), Positives = 47/107 (43%), Gaps = 6/107 (5%)

Query: 111 KEDQALSKEEEMETESDAEVECDLSNMEITEELRQYFAETERHREERRRQQQLDAERLDS 170
           KE Q L   E +  + +AE    L   ++ E+ R+   E +  REER R+     ER++ 
Sbjct: 537 KERQRL---ENLRRKEEAE---QLRRQKVEEDKRRRLEEVKLKREERLRKVLQARERVEQ 590

Query: 171 YVNADHDLYCNTRRSVEAPTERPGERRQAEMKRLYGDSAAKIQAMEA 217
                          ++  TE+  E R AE K     +A K++ +EA
Sbjct: 591 MKEEKKKQIEQKFAQIDEKTEKAKEERLAEEKAKKKAAAKKMEEVEA 637



 Score = 33.1 bits (74), Expect = 0.22
 Identities = 30/114 (26%), Positives = 44/114 (38%), Gaps = 16/114 (14%)

Query: 118 KEEEMETESDAEVECDLSNMEITEELRQYFAETERHREERRRQQQLDAERLDSYVNADHD 177
           KEEE E    A     L+     E   Q   E ER  +ERR Q++ + E           
Sbjct: 668 KEEEQERLRKAAEAKRLAEQREQERREQERREQERREQERREQERREQE----------- 716

Query: 178 LYCNTRRSVEAPTERPGERRQAEMKRLYGDSAAKIQAMEAAVQLSFDKHCDRKQ 231
                R+  E    R  ER QAE +    + A ++Q  +   +L   K  + +Q
Sbjct: 717 -----RQLAEQERRREQERLQAERELQEREKALRLQKEQLQRELEEKKKKEEQQ 765



 Score = 28.9 bits (63), Expect = 4.2
 Identities = 16/74 (21%), Positives = 35/74 (47%)

Query: 94  RRSGQHPRYSSRIQASTKEDQALSKEEEMETESDAEVECDLSNMEITEELRQYFAETERH 153
           RR  +      R Q   ++++ L+++E    +   + E +L   E    L++   + E  
Sbjct: 697 RREQERREQERREQERREQERQLAEQERRREQERLQAERELQEREKALRLQKEQLQRELE 756

Query: 154 REERRRQQQLDAER 167
            ++++ +QQ  AER
Sbjct: 757 EKKKKEEQQRLAER 770


>gi|148762982 hypothetical protein LOC387640 [Homo sapiens]
          Length = 908

 Score = 33.9 bits (76), Expect = 0.13
 Identities = 35/130 (26%), Positives = 55/130 (42%), Gaps = 22/130 (16%)

Query: 14  PWYSHPVYARYWQHYHQAMAWMQSHHNAYRKAVESCFNLPWYLPSALLPQS-SYDNEAAY 72
           P + H  +  +  H+H+A    QSHH  +    +       +L S   P+S S D+E++ 
Sbjct: 336 PHHHHHHHHHHHHHHHRAQPPQQSHHPPHHHRPQP------HLGS--FPESCSSDSESS- 386

Query: 73  PQSFYDHHVAWQDYPCSSSHFRRSGQHPRYSSRIQASTKEDQALSKEEEMETESDAEVEC 132
             S+ DH     D+  S S           SS   +S +E++   +EEE E E       
Sbjct: 387 --SYSDHAANDSDFGSSLSS----------SSNSVSSEEEEEEGEEEEEEEEEEGGSGAS 434

Query: 133 DLSNMEITEE 142
           D S +   EE
Sbjct: 435 DSSEVSSEEE 444


>gi|153085395 histone deacetylase 4 [Homo sapiens]
          Length = 1084

 Score = 33.5 bits (75), Expect = 0.17
 Identities = 24/125 (19%), Positives = 55/125 (44%), Gaps = 17/125 (13%)

Query: 111 KEDQALSKEEEMETESDAEVECDLSNMEITEELRQYFAETERHREERRRQQQLDAERLDS 170
           ++ + LS++ E +     + + ++  M+  +EL ++  + ERHR+E+  ++Q   ++L  
Sbjct: 95  RQHEQLSRQHEAQLHEHIKQQQEMLAMKHQQELLEHQRKLERHRQEQELEKQHREQKLQQ 154

Query: 171 YVNADHDLYCNTRRSVEAPTERPGERRQAEMKRLYGDSAAKIQAMEAAVQLSFDKHCDRK 230
             N +       + S  A TE   + ++  + +            + A+      HC   
Sbjct: 155 LKNKE-----KGKESAVASTEVKMKLQEFVLNK------------KKALAHRNLNHCISS 197

Query: 231 QPKYW 235
            P+YW
Sbjct: 198 DPRYW 202


>gi|8923421 seryl-tRNA synthetase 2 isoform b precursor [Homo
           sapiens]
          Length = 518

 Score = 33.5 bits (75), Expect = 0.17
 Identities = 28/88 (31%), Positives = 39/88 (44%), Gaps = 7/88 (7%)

Query: 76  FYDHHVAWQDYP----CSSSHFR---RSGQHPRYSSRIQASTKEDQALSKEEEMETESDA 128
           F DH VA++D P    CSS+ +R    +GQ PR   R+   TK +        +E  S  
Sbjct: 308 FMDHTVAFRDLPVRMVCSSTCYRAETNTGQEPRGLYRVHHFTKVEMFGVTGPGLEQSSQL 367

Query: 129 EVECDLSNMEITEELRQYFAETERHREE 156
             E     MEI  EL  +F   +   +E
Sbjct: 368 LEEFLSLQMEILTELGLHFRVLDMPTQE 395


>gi|225579074 seryl-tRNA synthetase 2 isoform a precursor [Homo
           sapiens]
          Length = 520

 Score = 33.5 bits (75), Expect = 0.17
 Identities = 28/88 (31%), Positives = 39/88 (44%), Gaps = 7/88 (7%)

Query: 76  FYDHHVAWQDYP----CSSSHFR---RSGQHPRYSSRIQASTKEDQALSKEEEMETESDA 128
           F DH VA++D P    CSS+ +R    +GQ PR   R+   TK +        +E  S  
Sbjct: 310 FMDHTVAFRDLPVRMVCSSTCYRAETNTGQEPRGLYRVHHFTKVEMFGVTGPGLEQSSQL 369

Query: 129 EVECDLSNMEITEELRQYFAETERHREE 156
             E     MEI  EL  +F   +   +E
Sbjct: 370 LEEFLSLQMEILTELGLHFRVLDMPTQE 397


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.316    0.126    0.391 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,273,628
Number of Sequences: 37866
Number of extensions: 402778
Number of successful extensions: 3145
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 67
Number of HSP's successfully gapped in prelim test: 194
Number of HSP's that attempted gapping in prelim test: 2516
Number of HSP's gapped (non-prelim): 716
length of query: 242
length of database: 18,247,518
effective HSP length: 99
effective length of query: 143
effective length of database: 14,498,784
effective search space: 2073326112
effective search space used: 2073326112
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 60 (27.7 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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