Guide to the Human Genome
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Name: GEMIN8 Sequence: fasta or formatted (242aa) NCBI GI: 8923481
Description:

gem (nuclear organelle) associated protein 8

Referenced in:

Capping and Splicing

Other entries for this name:
alt mRNA [242aa] gem (nuclear organelle) associated protein 8
alt mRNA [242aa] gem (nuclear organelle) associated protein 8
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            10.7         26           2
 C cysteine            2.1          5           1
 D aspartate           5.4         13           1
 E glutamate           9.5         23           3
 F phenylalanine       2.5          6           1
 G glycine             1.2          3           1
 H histidine           5.0         12           2
 I isoleucine          1.7          4           1
 K lysine              4.5         11           1
 L leucine             5.4         13           2
 M methionine          2.9          7           1
 N asparagine          2.5          6           1
 P proline             5.4         13           1
 Q glutamine           7.0         17           3
 R arginine            8.7         21           3
 S serine              9.5         23           3
 T threonine           3.3          8           1
 V valine              3.7          9           1
 W tryptophan          2.5          6           1
 Y tyrosine            6.6         16           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   gem (nuclear organelle) associated protein 8 
GEMIN8                1.000   gem (nuclear organelle) associated protein 8 
GEMIN8                1.000   gem (nuclear organelle) associated protein 8 
MSN                   0.035   moesin 
RDX                   0.031   radixin 
LOC100288837          0.029   PREDICTED: hypothetical protein XP_002343931, parti...
MLLT4                 0.027   myeloid/lymphoid or mixed-lineage leukemia (trithora...
LOC100134067          0.027   PREDICTED: hypothetical protein 
FAM184B               0.027   hypothetical protein LOC27146 
ENAH                  0.025   enabled homolog isoform a 
ENAH                  0.025   enabled homolog isoform b 
TCHH                  0.025   trichohyalin 
EVI5                  0.025   ecotropic viral integration site 5 
LOC100131202          0.023   PREDICTED: hypothetical protein 
KIAA0182              0.023   genetic suppressor element 1 isoform 2 
KIAA0182              0.023   genetic suppressor element 1 isoform 1 
CASC3                 0.021   metastatic lymph node 51 
INCENP                0.021   inner centromere protein antigens 135/155kDa isofor...
ACIN1                 0.021   apoptotic chromatin condensation inducer 1 
HIRIP3                0.021   HIRA interacting protein 3 
SNRNP48               0.021   U11/U12 snRNP 48K 
LOC100286959          0.019   PREDICTED: hypothetical protein XP_002343921 
UNC13A                0.019   unc-13 homolog A 
MGEA5                 0.019   meningioma expressed antigen 5 (hyaluronidase) isof...
MGEA5                 0.019   meningioma expressed antigen 5 (hyaluronidase) isofo...
INCENP                0.019   inner centromere protein antigens 135/155kDa isofor...
C10orf140             0.019   hypothetical protein LOC387640 
HDAC4                 0.016   histone deacetylase 4 
SARS2                 0.016   seryl-tRNA synthetase 2 isoform b precursor 
SARS2                 0.016   seryl-tRNA synthetase 2 isoform a precursor 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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