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Search of human proteins with 109715858
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|109715858 calcium-regulated heat-stable protein 1 [Homo
sapiens]
(147 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|109715854 calcium-regulated heat-stable protein 1 [Homo sapiens] 311 2e-85
gi|109715858 calcium-regulated heat-stable protein 1 [Homo sapiens] 311 2e-85
gi|24307959 RNA-binding protein pippin [Homo sapiens] 192 1e-49
gi|169207217 PREDICTED: zinc finger homeobox 2 [Homo sapiens] 35 0.029
gi|169207592 PREDICTED: zinc finger homeobox 2 [Homo sapiens] 35 0.029
gi|169207014 PREDICTED: zinc finger homeobox 2 [Homo sapiens] 35 0.029
gi|193083122 translocase of outer mitochondrial membrane 40 [Hom... 34 0.050
gi|193083120 translocase of outer mitochondrial membrane 40 [Hom... 34 0.050
gi|5174723 translocase of outer mitochondrial membrane 40 [Homo ... 34 0.050
gi|194473720 upstream of NRAS isoform 3 [Homo sapiens] 34 0.050
gi|56117852 upstream of NRAS isoform 1 [Homo sapiens] 34 0.050
gi|56117850 upstream of NRAS isoform 2 [Homo sapiens] 34 0.050
gi|120587019 zinc finger protein 318 [Homo sapiens] 34 0.050
gi|226528146 HRAS-like suppressor family, member 5 isoform 3 [Ho... 33 0.066
gi|16905367 HRAS-like suppressor family, member 5 isoform 1 [Hom... 33 0.066
gi|116256475 zinc finger protein 827 [Homo sapiens] 32 0.15
gi|149999378 inverted formin 2 isoform 2 [Homo sapiens] 32 0.15
gi|149999380 inverted formin 2 isoform 1 [Homo sapiens] 32 0.15
gi|169164209 PREDICTED: hypothetical protein [Homo sapiens] 32 0.25
gi|239741571 PREDICTED: hypothetical protein XP_002342241 [Homo ... 32 0.25
gi|54860079 nadrin isoform 1 [Homo sapiens] 32 0.25
gi|54860105 nadrin isoform 2 [Homo sapiens] 32 0.25
gi|40353727 synaptopodin isoform A [Homo sapiens] 31 0.33
gi|46852390 coiled-coil domain containing 6 [Homo sapiens] 31 0.33
gi|156071470 hyperpolarization activated cyclic nucleotide-gated... 31 0.42
gi|110349721 titin isoform novex-3 [Homo sapiens] 31 0.42
gi|110349719 titin isoform N2-A [Homo sapiens] 31 0.42
gi|110349717 titin isoform novex-2 [Homo sapiens] 31 0.42
gi|110349713 titin isoform novex-1 [Homo sapiens] 31 0.42
gi|110349715 titin isoform N2-B [Homo sapiens] 31 0.42
>gi|109715854 calcium-regulated heat-stable protein 1 [Homo sapiens]
Length = 147
Score = 311 bits (796), Expect = 2e-85
Identities = 147/147 (100%), Positives = 147/147 (100%)
Query: 1 MSSEPPPPPQPPTHQASVGLLDTPRSRERSPSPLRGNVVPSPLPTRRTRTFSATVRASQG 60
MSSEPPPPPQPPTHQASVGLLDTPRSRERSPSPLRGNVVPSPLPTRRTRTFSATVRASQG
Sbjct: 1 MSSEPPPPPQPPTHQASVGLLDTPRSRERSPSPLRGNVVPSPLPTRRTRTFSATVRASQG 60
Query: 61 PVYKGVCKCFCRSKGHGFITPADGGPDIFLHISDVEGEYVPVEGDEVTYKMCSIPPKNEK 120
PVYKGVCKCFCRSKGHGFITPADGGPDIFLHISDVEGEYVPVEGDEVTYKMCSIPPKNEK
Sbjct: 61 PVYKGVCKCFCRSKGHGFITPADGGPDIFLHISDVEGEYVPVEGDEVTYKMCSIPPKNEK 120
Query: 121 LQAVEVVITHLAPGTKHETWSGHVISS 147
LQAVEVVITHLAPGTKHETWSGHVISS
Sbjct: 121 LQAVEVVITHLAPGTKHETWSGHVISS 147
>gi|109715858 calcium-regulated heat-stable protein 1 [Homo sapiens]
Length = 147
Score = 311 bits (796), Expect = 2e-85
Identities = 147/147 (100%), Positives = 147/147 (100%)
Query: 1 MSSEPPPPPQPPTHQASVGLLDTPRSRERSPSPLRGNVVPSPLPTRRTRTFSATVRASQG 60
MSSEPPPPPQPPTHQASVGLLDTPRSRERSPSPLRGNVVPSPLPTRRTRTFSATVRASQG
Sbjct: 1 MSSEPPPPPQPPTHQASVGLLDTPRSRERSPSPLRGNVVPSPLPTRRTRTFSATVRASQG 60
Query: 61 PVYKGVCKCFCRSKGHGFITPADGGPDIFLHISDVEGEYVPVEGDEVTYKMCSIPPKNEK 120
PVYKGVCKCFCRSKGHGFITPADGGPDIFLHISDVEGEYVPVEGDEVTYKMCSIPPKNEK
Sbjct: 61 PVYKGVCKCFCRSKGHGFITPADGGPDIFLHISDVEGEYVPVEGDEVTYKMCSIPPKNEK 120
Query: 121 LQAVEVVITHLAPGTKHETWSGHVISS 147
LQAVEVVITHLAPGTKHETWSGHVISS
Sbjct: 121 LQAVEVVITHLAPGTKHETWSGHVISS 147
>gi|24307959 RNA-binding protein pippin [Homo sapiens]
Length = 153
Score = 192 bits (487), Expect = 1e-49
Identities = 97/151 (64%), Positives = 110/151 (72%), Gaps = 5/151 (3%)
Query: 2 SSEPPPPPQPPTHQASVGLLDT-PRSRERSPSPLRGNV----VPSPLPTRRTRTFSATVR 56
S PP PP H + T P RE S RG V +PSPLPT+RTRT+SAT R
Sbjct: 3 SESTSPPVVPPLHSPKSPVWPTFPFHREGSRVWERGGVPPRDLPSPLPTKRTRTYSATAR 62
Query: 57 ASQGPVYKGVCKCFCRSKGHGFITPADGGPDIFLHISDVEGEYVPVEGDEVTYKMCSIPP 116
AS GPV+KGVCK F RS+GHGFITP +G DIF+H+SD+EGEYVPVEGDEVTYKMC IPP
Sbjct: 63 ASAGPVFKGVCKQFSRSQGHGFITPENGSEDIFVHVSDIEGEYVPVEGDEVTYKMCPIPP 122
Query: 117 KNEKLQAVEVVITHLAPGTKHETWSGHVISS 147
KN+K QAVEVV+T LAP T HETWSG V+ S
Sbjct: 123 KNQKFQAVEVVLTQLAPHTPHETWSGQVVGS 153
>gi|169207217 PREDICTED: zinc finger homeobox 2 [Homo sapiens]
Length = 2790
Score = 34.7 bits (78), Expect = 0.029
Identities = 20/54 (37%), Positives = 24/54 (44%), Gaps = 11/54 (20%)
Query: 2 SSEPPPPPQPPTHQASVGLLDTPRSRERSPSPLRGNVV-----PSPLPTRRTRT 50
++ PPPPPQPP + + R ER P GN P PLP RT
Sbjct: 1609 AATPPPPPQPPKAELA------EREWERPPMAKEGNEAGPSSPPDPLPNEAART 1656
>gi|169207592 PREDICTED: zinc finger homeobox 2 [Homo sapiens]
Length = 2706
Score = 34.7 bits (78), Expect = 0.029
Identities = 20/54 (37%), Positives = 24/54 (44%), Gaps = 11/54 (20%)
Query: 2 SSEPPPPPQPPTHQASVGLLDTPRSRERSPSPLRGNVV-----PSPLPTRRTRT 50
++ PPPPPQPP + + R ER P GN P PLP RT
Sbjct: 1525 AATPPPPPQPPKAELA------EREWERPPMAKEGNEAGPSSPPDPLPNEAART 1572
>gi|169207014 PREDICTED: zinc finger homeobox 2 [Homo sapiens]
Length = 2706
Score = 34.7 bits (78), Expect = 0.029
Identities = 20/54 (37%), Positives = 24/54 (44%), Gaps = 11/54 (20%)
Query: 2 SSEPPPPPQPPTHQASVGLLDTPRSRERSPSPLRGNVV-----PSPLPTRRTRT 50
++ PPPPPQPP + + R ER P GN P PLP RT
Sbjct: 1525 AATPPPPPQPPKAELA------EREWERPPMAKEGNEAGPSSPPDPLPNEAART 1572
>gi|193083122 translocase of outer mitochondrial membrane 40 [Homo
sapiens]
Length = 361
Score = 33.9 bits (76), Expect = 0.050
Identities = 23/70 (32%), Positives = 29/70 (41%), Gaps = 2/70 (2%)
Query: 2 SSEPPPPPQPPTHQASVGLLDTPRSRERSPSPLRGNVVPSPLPTRRT--RTFSATVRASQ 59
+S PP P PP A VGL P S P G + + T R+ RT A ++
Sbjct: 7 ASSPPAGPPPPPAPALVGLPPPPPSPPGFTLPPLGGSLGAGTSTSRSSERTPGAATASAS 66
Query: 60 GPVYKGVCKC 69
G G C C
Sbjct: 67 GAAEDGACGC 76
>gi|193083120 translocase of outer mitochondrial membrane 40 [Homo
sapiens]
Length = 361
Score = 33.9 bits (76), Expect = 0.050
Identities = 23/70 (32%), Positives = 29/70 (41%), Gaps = 2/70 (2%)
Query: 2 SSEPPPPPQPPTHQASVGLLDTPRSRERSPSPLRGNVVPSPLPTRRT--RTFSATVRASQ 59
+S PP P PP A VGL P S P G + + T R+ RT A ++
Sbjct: 7 ASSPPAGPPPPPAPALVGLPPPPPSPPGFTLPPLGGSLGAGTSTSRSSERTPGAATASAS 66
Query: 60 GPVYKGVCKC 69
G G C C
Sbjct: 67 GAAEDGACGC 76
>gi|5174723 translocase of outer mitochondrial membrane 40 [Homo
sapiens]
Length = 361
Score = 33.9 bits (76), Expect = 0.050
Identities = 23/70 (32%), Positives = 29/70 (41%), Gaps = 2/70 (2%)
Query: 2 SSEPPPPPQPPTHQASVGLLDTPRSRERSPSPLRGNVVPSPLPTRRT--RTFSATVRASQ 59
+S PP P PP A VGL P S P G + + T R+ RT A ++
Sbjct: 7 ASSPPAGPPPPPAPALVGLPPPPPSPPGFTLPPLGGSLGAGTSTSRSSERTPGAATASAS 66
Query: 60 GPVYKGVCKC 69
G G C C
Sbjct: 67 GAAEDGACGC 76
>gi|194473720 upstream of NRAS isoform 3 [Homo sapiens]
Length = 813
Score = 33.9 bits (76), Expect = 0.050
Identities = 26/74 (35%), Positives = 35/74 (47%), Gaps = 7/74 (9%)
Query: 77 GFITPADGGPDIFLHISDVEGEYVPVE-GDEVTYKMCSIPPKNEKLQAVEVVITHLAPGT 135
GFI A+ +IF H S+ G+ +E GD V Y + K K+ A +V TH G
Sbjct: 546 GFIETANHDKEIFFHYSEFSGDVDSLELGDMVEYSLSK--GKGNKVSAEKVNKTHSVNGI 603
Query: 136 KHET----WSGHVI 145
E +SG VI
Sbjct: 604 TEEADPTIYSGKVI 617
Score = 26.6 bits (57), Expect = 8.0
Identities = 17/51 (33%), Positives = 28/51 (54%), Gaps = 4/51 (7%)
Query: 77 GFITPADGGPDIFLHISDVEGEYVPVE-GDEVTYKMCSIPPKNEKLQAVEV 126
GFI D +IF H S+ +G+ ++ GD+V + +I +N K A +V
Sbjct: 213 GFIERGDVVKEIFFHYSEFKGDLETLQPGDDVEF---TIKDRNGKEVATDV 260
>gi|56117852 upstream of NRAS isoform 1 [Homo sapiens]
Length = 798
Score = 33.9 bits (76), Expect = 0.050
Identities = 26/74 (35%), Positives = 35/74 (47%), Gaps = 7/74 (9%)
Query: 77 GFITPADGGPDIFLHISDVEGEYVPVE-GDEVTYKMCSIPPKNEKLQAVEVVITHLAPGT 135
GFI A+ +IF H S+ G+ +E GD V Y + K K+ A +V TH G
Sbjct: 531 GFIETANHDKEIFFHYSEFSGDVDSLELGDMVEYSLSK--GKGNKVSAEKVNKTHSVNGI 588
Query: 136 KHET----WSGHVI 145
E +SG VI
Sbjct: 589 TEEADPTIYSGKVI 602
Score = 26.6 bits (57), Expect = 8.0
Identities = 17/51 (33%), Positives = 28/51 (54%), Gaps = 4/51 (7%)
Query: 77 GFITPADGGPDIFLHISDVEGEYVPVE-GDEVTYKMCSIPPKNEKLQAVEV 126
GFI D +IF H S+ +G+ ++ GD+V + +I +N K A +V
Sbjct: 198 GFIERGDVVKEIFFHYSEFKGDLETLQPGDDVEF---TIKDRNGKEVATDV 245
>gi|56117850 upstream of NRAS isoform 2 [Homo sapiens]
Length = 767
Score = 33.9 bits (76), Expect = 0.050
Identities = 26/74 (35%), Positives = 35/74 (47%), Gaps = 7/74 (9%)
Query: 77 GFITPADGGPDIFLHISDVEGEYVPVE-GDEVTYKMCSIPPKNEKLQAVEVVITHLAPGT 135
GFI A+ +IF H S+ G+ +E GD V Y + K K+ A +V TH G
Sbjct: 500 GFIETANHDKEIFFHYSEFSGDVDSLELGDMVEYSLSK--GKGNKVSAEKVNKTHSVNGI 557
Query: 136 KHET----WSGHVI 145
E +SG VI
Sbjct: 558 TEEADPTIYSGKVI 571
Score = 26.6 bits (57), Expect = 8.0
Identities = 17/51 (33%), Positives = 28/51 (54%), Gaps = 4/51 (7%)
Query: 77 GFITPADGGPDIFLHISDVEGEYVPVE-GDEVTYKMCSIPPKNEKLQAVEV 126
GFI D +IF H S+ +G+ ++ GD+V + +I +N K A +V
Sbjct: 167 GFIERGDVVKEIFFHYSEFKGDLETLQPGDDVEF---TIKDRNGKEVATDV 214
>gi|120587019 zinc finger protein 318 [Homo sapiens]
Length = 2279
Score = 33.9 bits (76), Expect = 0.050
Identities = 23/58 (39%), Positives = 27/58 (46%), Gaps = 8/58 (13%)
Query: 3 SEPPPPPQPPTHQASVGLLDTPRSRERSPSPLRGNVVPSPLPTRRTRTFSATVRASQG 60
S PPPPP + + TP R RSPS RG SP P R R + RA +G
Sbjct: 39 SSPPPPPSGSSSR-------TPARRPRSPSGHRGRRA-SPSPPRGRRVSPSPPRARRG 88
>gi|226528146 HRAS-like suppressor family, member 5 isoform 3
[Homo sapiens]
Length = 253
Score = 33.5 bits (75), Expect = 0.066
Identities = 22/59 (37%), Positives = 28/59 (47%), Gaps = 2/59 (3%)
Query: 5 PPPPPQPPTHQASVGLLDTPRSRERSPSPLRGNVVPSPLPTRRTRTFSATVR--ASQGP 61
PPP P+P + A G D P + RS P G SPL + F+A V+ A Q P
Sbjct: 19 PPPLPKPASRTAGTGPKDQPPALRRSAVPHSGLNSISPLELEESVGFAALVQLPAKQPP 77
>gi|16905367 HRAS-like suppressor family, member 5 isoform 1 [Homo
sapiens]
Length = 279
Score = 33.5 bits (75), Expect = 0.066
Identities = 22/59 (37%), Positives = 28/59 (47%), Gaps = 2/59 (3%)
Query: 5 PPPPPQPPTHQASVGLLDTPRSRERSPSPLRGNVVPSPLPTRRTRTFSATVR--ASQGP 61
PPP P+P + A G D P + RS P G SPL + F+A V+ A Q P
Sbjct: 19 PPPLPKPASRTAGTGPKDQPPALRRSAVPHSGLNSISPLELEESVGFAALVQLPAKQPP 77
>gi|116256475 zinc finger protein 827 [Homo sapiens]
Length = 1077
Score = 32.3 bits (72), Expect = 0.15
Identities = 13/28 (46%), Positives = 15/28 (53%)
Query: 5 PPPPPQPPTHQASVGLLDTPRSRERSPS 32
PPPPP PP + LL P+ R PS
Sbjct: 335 PPPPPPPPPQSLELLLLPVPKGRVSKPS 362
>gi|149999378 inverted formin 2 isoform 2 [Homo sapiens]
Length = 1240
Score = 32.3 bits (72), Expect = 0.15
Identities = 19/45 (42%), Positives = 21/45 (46%), Gaps = 2/45 (4%)
Query: 2 SSEPPPPPQPPTHQASVGLLDTPRSRERSPSPLRGNVVP--SPLP 44
SS PPPP PP SVG P + P P G + P PLP
Sbjct: 433 SSAEPPPPPPPPPLPSVGAKALPTAPPPPPLPGLGAMAPPAPPLP 477
Score = 26.9 bits (58), Expect = 6.1
Identities = 16/40 (40%), Positives = 16/40 (40%), Gaps = 6/40 (15%)
Query: 5 PPPPPQPPTHQASVGLLDTPRSRERSPSPLRGNVVPSPLP 44
PP PP PP S L P P PL G P P P
Sbjct: 471 PPAPPLPPPLPGSCEFLPPP------PPPLPGLGCPPPPP 504
Score = 26.6 bits (57), Expect = 8.0
Identities = 17/44 (38%), Positives = 19/44 (43%), Gaps = 13/44 (29%)
Query: 2 SSEPPPPPQPPTHQASVGLLDTPRSRERSPSPLRGNVVPSPLPT 45
+S PPPPP PP S S E P P P PLP+
Sbjct: 418 ASTPPPPPPPPLLPGS--------SAEPPPPP-----PPPPLPS 448
>gi|149999380 inverted formin 2 isoform 1 [Homo sapiens]
Length = 1249
Score = 32.3 bits (72), Expect = 0.15
Identities = 19/45 (42%), Positives = 21/45 (46%), Gaps = 2/45 (4%)
Query: 2 SSEPPPPPQPPTHQASVGLLDTPRSRERSPSPLRGNVVP--SPLP 44
SS PPPP PP SVG P + P P G + P PLP
Sbjct: 433 SSAEPPPPPPPPPLPSVGAKALPTAPPPPPLPGLGAMAPPAPPLP 477
Score = 26.9 bits (58), Expect = 6.1
Identities = 16/40 (40%), Positives = 16/40 (40%), Gaps = 6/40 (15%)
Query: 5 PPPPPQPPTHQASVGLLDTPRSRERSPSPLRGNVVPSPLP 44
PP PP PP S L P P PL G P P P
Sbjct: 471 PPAPPLPPPLPGSCEFLPPP------PPPLPGLGCPPPPP 504
Score = 26.6 bits (57), Expect = 8.0
Identities = 17/44 (38%), Positives = 19/44 (43%), Gaps = 13/44 (29%)
Query: 2 SSEPPPPPQPPTHQASVGLLDTPRSRERSPSPLRGNVVPSPLPT 45
+S PPPPP PP S S E P P P PLP+
Sbjct: 418 ASTPPPPPPPPLLPGS--------SAEPPPPP-----PPPPLPS 448
>gi|169164209 PREDICTED: hypothetical protein [Homo sapiens]
Length = 179
Score = 31.6 bits (70), Expect = 0.25
Identities = 20/54 (37%), Positives = 22/54 (40%), Gaps = 6/54 (11%)
Query: 5 PPPPPQPPTHQASVGLLDTPRSRERSPSPLRGNVVPSPLPTRRTRTFSATVRAS 58
PPPP PPT L+ P PSP R SP P+R F AS
Sbjct: 16 PPPPDLPPTPTRRAPLIGCP------PSPARPAPSASPSPSRAAGPFLPPSHAS 63
>gi|239741571 PREDICTED: hypothetical protein XP_002342241 [Homo
sapiens]
Length = 179
Score = 31.6 bits (70), Expect = 0.25
Identities = 20/54 (37%), Positives = 22/54 (40%), Gaps = 6/54 (11%)
Query: 5 PPPPPQPPTHQASVGLLDTPRSRERSPSPLRGNVVPSPLPTRRTRTFSATVRAS 58
PPPP PPT L+ P PSP R SP P+R F AS
Sbjct: 16 PPPPDLPPTPTRRAPLIGCP------PSPARPAPSASPSPSRAAGPFLPPSHAS 63
>gi|54860079 nadrin isoform 1 [Homo sapiens]
Length = 881
Score = 31.6 bits (70), Expect = 0.25
Identities = 20/61 (32%), Positives = 25/61 (40%), Gaps = 5/61 (8%)
Query: 6 PPPP-----QPPTHQASVGLLDTPRSRERSPSPLRGNVVPSPLPTRRTRTFSATVRASQG 60
P PP QPP ++ L PR S SP++ P P P + T SQG
Sbjct: 675 PSPPTQHTGQPPGQPSAPSQLSAPRRYSSSLSPIQAPNHPPPQPPTQATPLMHTKPNSQG 734
Query: 61 P 61
P
Sbjct: 735 P 735
>gi|54860105 nadrin isoform 2 [Homo sapiens]
Length = 803
Score = 31.6 bits (70), Expect = 0.25
Identities = 20/61 (32%), Positives = 25/61 (40%), Gaps = 5/61 (8%)
Query: 6 PPPP-----QPPTHQASVGLLDTPRSRERSPSPLRGNVVPSPLPTRRTRTFSATVRASQG 60
P PP QPP ++ L PR S SP++ P P P + T SQG
Sbjct: 597 PSPPTQHTGQPPGQPSAPSQLSAPRRYSSSLSPIQAPNHPPPQPPTQATPLMHTKPNSQG 656
Query: 61 P 61
P
Sbjct: 657 P 657
>gi|40353727 synaptopodin isoform A [Homo sapiens]
Length = 903
Score = 31.2 bits (69), Expect = 0.33
Identities = 21/53 (39%), Positives = 25/53 (47%), Gaps = 10/53 (18%)
Query: 1 MSSEPPPPPQPPTHQASVGLLDTPRSRERSPSPLRGNVVPSPLPTRRTRTFSA 53
MSS PP PP PP +P ERS SPLR P P+R+ + A
Sbjct: 716 MSSPPPLPPPPPM---------SPSWSERSVSPLRPETEARP-PSRQLQALLA 758
Score = 27.7 bits (60), Expect = 3.6
Identities = 14/31 (45%), Positives = 14/31 (45%), Gaps = 10/31 (32%)
Query: 5 PPPPPQPPTHQASVGLLDTPRSRERSPSPLR 35
PPPPP PP P R RSP P R
Sbjct: 789 PPPPPPPP----------PPPPRMRSPQPAR 809
>gi|46852390 coiled-coil domain containing 6 [Homo sapiens]
Length = 474
Score = 31.2 bits (69), Expect = 0.33
Identities = 15/41 (36%), Positives = 21/41 (51%), Gaps = 5/41 (12%)
Query: 4 EPPPPPQPPTHQASVGLLDTPRSRERSPSPLRGNVVPSPLP 44
+PPPPP PP Q +V P + P+P + + PS P
Sbjct: 439 QPPPPPPPPPMQPTV-----PSAATSQPTPSQHSAHPSSQP 474
>gi|156071470 hyperpolarization activated cyclic nucleotide-gated
potassium channel 2 [Homo sapiens]
Length = 889
Score = 30.8 bits (68), Expect = 0.42
Identities = 21/59 (35%), Positives = 28/59 (47%), Gaps = 12/59 (20%)
Query: 2 SSEPPPPPQPPTHQASVGLLDTPRSRERSP------SPLRGNVVPSPLPTRRTRTFSAT 54
S PPPP PP AS PR+ SP +PL G +P+ +R +R SA+
Sbjct: 771 SPGPPPPASPPGAPAS------PRAPRTSPYGGLPAAPLAGPALPARRLSRASRPLSAS 823
Score = 29.3 bits (64), Expect = 1.2
Identities = 20/60 (33%), Positives = 24/60 (40%), Gaps = 4/60 (6%)
Query: 6 PPPPQPPTHQASVGLLDTPRSRERSPSPLRGNVVP----SPLPTRRTRTFSATVRASQGP 61
PPPP PP +++ L + P R V P SP RR A AS GP
Sbjct: 715 PPPPPPPQVTSAIATLQQAAAMSFCPQVARPLVGPLALGSPRLVRRPPPGPAPAAASPGP 774
>gi|110349721 titin isoform novex-3 [Homo sapiens]
Length = 5604
Score = 30.8 bits (68), Expect = 0.42
Identities = 22/64 (34%), Positives = 28/64 (43%), Gaps = 9/64 (14%)
Query: 5 PPPP----PQPPTHQASVGLL--DTPRSRERSPSPLRGNVVPSPLPTRRTRTFSATVRAS 58
PP P P PP+ A L +P SPSP+R P+P P R+ S R S
Sbjct: 258 PPKPKSRSPTPPSIAAKAQLARQQSPSPIRHSPSPVRHVRAPTPSP---VRSVSPAARIS 314
Query: 59 QGPV 62
P+
Sbjct: 315 TSPI 318
>gi|110349719 titin isoform N2-A [Homo sapiens]
Length = 33423
Score = 30.8 bits (68), Expect = 0.42
Identities = 22/64 (34%), Positives = 28/64 (43%), Gaps = 9/64 (14%)
Query: 5 PPPP----PQPPTHQASVGLL--DTPRSRERSPSPLRGNVVPSPLPTRRTRTFSATVRAS 58
PP P P PP+ A L +P SPSP+R P+P P R+ S R S
Sbjct: 258 PPKPKSRSPTPPSIAAKAQLARQQSPSPIRHSPSPVRHVRAPTPSP---VRSVSPAARIS 314
Query: 59 QGPV 62
P+
Sbjct: 315 TSPI 318
>gi|110349717 titin isoform novex-2 [Homo sapiens]
Length = 27118
Score = 30.8 bits (68), Expect = 0.42
Identities = 22/64 (34%), Positives = 28/64 (43%), Gaps = 9/64 (14%)
Query: 5 PPPP----PQPPTHQASVGLL--DTPRSRERSPSPLRGNVVPSPLPTRRTRTFSATVRAS 58
PP P P PP+ A L +P SPSP+R P+P P R+ S R S
Sbjct: 258 PPKPKSRSPTPPSIAAKAQLARQQSPSPIRHSPSPVRHVRAPTPSP---VRSVSPAARIS 314
Query: 59 QGPV 62
P+
Sbjct: 315 TSPI 318
>gi|110349713 titin isoform novex-1 [Homo sapiens]
Length = 27051
Score = 30.8 bits (68), Expect = 0.42
Identities = 22/64 (34%), Positives = 28/64 (43%), Gaps = 9/64 (14%)
Query: 5 PPPP----PQPPTHQASVGLL--DTPRSRERSPSPLRGNVVPSPLPTRRTRTFSATVRAS 58
PP P P PP+ A L +P SPSP+R P+P P R+ S R S
Sbjct: 258 PPKPKSRSPTPPSIAAKAQLARQQSPSPIRHSPSPVRHVRAPTPSP---VRSVSPAARIS 314
Query: 59 QGPV 62
P+
Sbjct: 315 TSPI 318
>gi|110349715 titin isoform N2-B [Homo sapiens]
Length = 26926
Score = 30.8 bits (68), Expect = 0.42
Identities = 22/64 (34%), Positives = 28/64 (43%), Gaps = 9/64 (14%)
Query: 5 PPPP----PQPPTHQASVGLL--DTPRSRERSPSPLRGNVVPSPLPTRRTRTFSATVRAS 58
PP P P PP+ A L +P SPSP+R P+P P R+ S R S
Sbjct: 258 PPKPKSRSPTPPSIAAKAQLARQQSPSPIRHSPSPVRHVRAPTPSP---VRSVSPAARIS 314
Query: 59 QGPV 62
P+
Sbjct: 315 TSPI 318
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.315 0.134 0.420
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,503,084
Number of Sequences: 37866
Number of extensions: 493882
Number of successful extensions: 4483
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 80
Number of HSP's successfully gapped in prelim test: 192
Number of HSP's that attempted gapping in prelim test: 3711
Number of HSP's gapped (non-prelim): 826
length of query: 147
length of database: 18,247,518
effective HSP length: 93
effective length of query: 54
effective length of database: 14,725,980
effective search space: 795202920
effective search space used: 795202920
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 57 (26.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.