Guide to the Human Genome
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Name: RAD51AP2 Sequence: fasta or formatted (1159aa) NCBI GI: 149773468
Description:

RAD51 associated protein 2

Referenced in:

DNases, Recombination, and DNA Repair

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             3.1         36           2
 C cysteine            2.9         34           2
 D aspartate           4.6         53           2
 E glutamate           8.9        103           3
 F phenylalanine       4.3         50           2
 G glycine             3.0         35           2
 H histidine           2.4         28           1
 I isoleucine          6.3         73           2
 K lysine              8.9        103           3
 L leucine             8.7        101           4
 M methionine          2.1         24           1
 N asparagine          8.9        103           2
 P proline             4.3         50           2
 Q glutamine           4.1         48           2
 R arginine            4.5         52           2
 S serine              9.5        110           3
 T threonine           4.7         54           2
 V valine              4.9         57           3
 W tryptophan          1.0         12           1
 Y tyrosine            2.8         33           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   RAD51 associated protein 2 
HMMR                  0.006   hyaluronan-mediated motility receptor isoform c [Ho...
HMMR                  0.006   hyaluronan-mediated motility receptor isoform d [Ho...
HMMR                  0.006   hyaluronan-mediated motility receptor isoform a [Ho...
HMMR                  0.006   hyaluronan-mediated motility receptor isoform b [Ho...
TTLL6                 0.005   tubulin tyrosine ligase-like family, member 6 isofo...
MYH10                 0.005   myosin, heavy polypeptide 10, non-muscle 
MYO5C                 0.005   myosin VC 
TRIP11                0.004   thyroid hormone receptor interactor 11 
CENPF                 0.004   centromere protein F 
CYLC1                 0.004   cylicin, basic protein of sperm head cytoskeleton 1...
BRCA1                 0.004   breast cancer 1, early onset isoform 2 
BRCA1                 0.004   breast cancer 1, early onset isoform 3 
BRCA1                 0.004   breast cancer 1, early onset isoform 1 
BRCA2                 0.004   breast cancer 2, early onset 
CLSPN                 0.004   claspin 
ZNF804A               0.003   zinc finger protein 804A 
C17orf96              0.003   hypothetical protein LOC100170841 
CCDC122               0.003   coiled-coil domain containing 122 
C10orf78              0.003   hypothetical protein LOC119392 isoform b 
C10orf78              0.003   hypothetical protein LOC119392 isoform a 
MNS1                  0.003   meiosis-specific nuclear structural 1 
CCDC18                0.003   sarcoma antigen NY-SAR-41 
CHKA                  0.003   choline kinase alpha isoform b 
CHKA                  0.003   choline kinase alpha isoform a 
LOC653125             0.003   PREDICTED: similar to Golgin subfamily A member 8-l...
LOC653073             0.003   PREDICTED: Golgin subfamily A member 8-like protein...
RAD51AP1              0.003   RAD51 associated protein 1 isoform b 
RAD51AP1              0.003   RAD51 associated protein 1 isoform a 
NIPBL                 0.003   delangin isoform B 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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