BLASTP 2.2.11 [Jun-05-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= gi|149588791 retinoic acid receptor responder (tazarotene induced) 3 [Homo sapiens] (164 letters) Database: hs.faa 37,866 sequences; 18,247,518 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|149588791 retinoic acid receptor responder (tazarotene induce... 333 3e-92 gi|189571621 HRAS-like suppressor 3 [Homo sapiens] 165 1e-41 gi|189571618 HRAS-like suppressor 3 [Homo sapiens] 165 1e-41 gi|8923526 HRAS-like suppressor 2 [Homo sapiens] 160 4e-40 gi|16905367 HRAS-like suppressor family, member 5 isoform 1 [Hom... 149 1e-36 gi|226491950 HRAS-like suppressor family, member 5 isoform 2 [Ho... 149 1e-36 gi|9966859 HRAS-like suppressor [Homo sapiens] 137 4e-33 gi|226528146 HRAS-like suppressor family, member 5 isoform 3 [Ho... 123 6e-29 gi|46249410 lecithin retinol acyltransferase [Homo sapiens] 57 9e-09 gi|28557798 family with sequence similarity 84, member B [Homo s... 51 4e-07 gi|21553329 family with sequence similarity 84, member A [Homo s... 45 3e-05 gi|48255931 hepatoma-derived growth factor-related protein 2 iso... 30 0.94 gi|6912330 deafness locus associated putative guanine nucleotide... 30 0.94 gi|14249158 hepatoma-derived growth factor-related protein 2 iso... 30 0.94 gi|30795121 F-box and WD repeat domain containing 8 isoform 2 [H... 29 2.1 gi|30795123 F-box and WD repeat domain containing 8 isoform 1 [H... 29 2.1 gi|7657587 solute carrier family 6 (neurotransmitter transporter... 28 4.6 gi|157388965 schlafen family member 11 [Homo sapiens] 28 4.6 gi|157388963 schlafen family member 11 [Homo sapiens] 28 4.6 gi|157388961 schlafen family member 11 [Homo sapiens] 28 4.6 gi|157388959 schlafen family member 11 [Homo sapiens] 28 4.6 gi|157388957 schlafen family member 11 [Homo sapiens] 28 4.6 gi|209969819 hypothetical protein LOC253143 [Homo sapiens] 28 4.6 gi|217416332 trinucleotide repeat containing 6C isoform 1 [Homo ... 27 6.1 gi|33413425 trinucleotide repeat containing 6C isoform 2 [Homo s... 27 6.1 gi|169166558 PREDICTED: similar to hCG18094 [Homo sapiens] 27 7.9 gi|169167297 PREDICTED: similar to hCG18094 [Homo sapiens] 27 7.9 gi|169166473 PREDICTED: similar to hCG18094 [Homo sapiens] 27 7.9 gi|212720861 tubulin tyrosine ligase-like family, member 11 a [H... 27 7.9 gi|89363028 tubulin tyrosine ligase-like family, member 11 b [Ho... 27 7.9 >gi|149588791 retinoic acid receptor responder (tazarotene induced) 3 [Homo sapiens] Length = 164 Score = 333 bits (855), Expect = 3e-92 Identities = 164/164 (100%), Positives = 164/164 (100%) Query: 1 MASPHQEPKPGDLIEIFRLGYEHWALYIGDGYVIHLAPPSEYPGAGSSSVFSVLSNSAEV 60 MASPHQEPKPGDLIEIFRLGYEHWALYIGDGYVIHLAPPSEYPGAGSSSVFSVLSNSAEV Sbjct: 1 MASPHQEPKPGDLIEIFRLGYEHWALYIGDGYVIHLAPPSEYPGAGSSSVFSVLSNSAEV 60 Query: 61 KRERLEDVVGGCCYRVNNSLDHEYQPRPVEVIISSAKEMVGQKMKYSIVSRNCEHFVTQL 120 KRERLEDVVGGCCYRVNNSLDHEYQPRPVEVIISSAKEMVGQKMKYSIVSRNCEHFVTQL Sbjct: 61 KRERLEDVVGGCCYRVNNSLDHEYQPRPVEVIISSAKEMVGQKMKYSIVSRNCEHFVTQL 120 Query: 121 RYGKSRCKQVEKAKVEVGVATALGILVVAGCSFAIRRYQKKATA 164 RYGKSRCKQVEKAKVEVGVATALGILVVAGCSFAIRRYQKKATA Sbjct: 121 RYGKSRCKQVEKAKVEVGVATALGILVVAGCSFAIRRYQKKATA 164 >gi|189571621 HRAS-like suppressor 3 [Homo sapiens] Length = 162 Score = 165 bits (418), Expect = 1e-41 Identities = 83/162 (51%), Positives = 107/162 (66%), Gaps = 1/162 (0%) Query: 1 MASPHQEPKPGDLIEIFRLGYEHWALYIGDGYVIHLAPPSEYPGAGSSSVFSVLSNSAEV 60 M +P EPKPGDLIEIFR Y HWA+Y+GDGYV+HLAPPSE GAG++SV S L++ A V Sbjct: 1 MRAPIPEPKPGDLIEIFRPFYRHWAIYVGDGYVVHLAPPSEVAGAGAASVMSALTDKAIV 60 Query: 61 KRERLEDVVGGCCYRVNNSLDHEYQPRPVEVIISSAKEMVGQKMKYSIVSRNCEHFVTQL 120 K+E L DV G Y+VNN D +Y P P II A+E+VGQ++ Y + S NCEHFV +L Sbjct: 61 KKELLYDVAGSDKYQVNNKHDDKYSPLPCSKIIQRAEELVGQEVLYKLTSENCEHFVNEL 120 Query: 121 RYGKSRCKQVEKAKVEVGVA-TALGILVVAGCSFAIRRYQKK 161 RYG +R QV + VA L + + G F+ + QK+ Sbjct: 121 RYGVARSDQVRDVIIAASVAGMGLAAMSLIGVMFSRNKRQKQ 162 >gi|189571618 HRAS-like suppressor 3 [Homo sapiens] Length = 162 Score = 165 bits (418), Expect = 1e-41 Identities = 83/162 (51%), Positives = 107/162 (66%), Gaps = 1/162 (0%) Query: 1 MASPHQEPKPGDLIEIFRLGYEHWALYIGDGYVIHLAPPSEYPGAGSSSVFSVLSNSAEV 60 M +P EPKPGDLIEIFR Y HWA+Y+GDGYV+HLAPPSE GAG++SV S L++ A V Sbjct: 1 MRAPIPEPKPGDLIEIFRPFYRHWAIYVGDGYVVHLAPPSEVAGAGAASVMSALTDKAIV 60 Query: 61 KRERLEDVVGGCCYRVNNSLDHEYQPRPVEVIISSAKEMVGQKMKYSIVSRNCEHFVTQL 120 K+E L DV G Y+VNN D +Y P P II A+E+VGQ++ Y + S NCEHFV +L Sbjct: 61 KKELLYDVAGSDKYQVNNKHDDKYSPLPCSKIIQRAEELVGQEVLYKLTSENCEHFVNEL 120 Query: 121 RYGKSRCKQVEKAKVEVGVA-TALGILVVAGCSFAIRRYQKK 161 RYG +R QV + VA L + + G F+ + QK+ Sbjct: 121 RYGVARSDQVRDVIIAASVAGMGLAAMSLIGVMFSRNKRQKQ 162 >gi|8923526 HRAS-like suppressor 2 [Homo sapiens] Length = 162 Score = 160 bits (406), Expect = 4e-40 Identities = 81/143 (56%), Positives = 95/143 (66%) Query: 1 MASPHQEPKPGDLIEIFRLGYEHWALYIGDGYVIHLAPPSEYPGAGSSSVFSVLSNSAEV 60 MA P+ GDLIEI R GY HWA+Y+GDGYV+HLAP SE GAG++SV S L+N A V Sbjct: 1 MALARPRPRLGDLIEISRFGYAHWAIYVGDGYVVHLAPASEIAGAGAASVLSALTNKAIV 60 Query: 61 KRERLEDVVGGCCYRVNNSLDHEYQPRPVEVIISSAKEMVGQKMKYSIVSRNCEHFVTQL 120 K+E L V GG YRVNN D Y P P I+ A+E+VGQ++ YS+ S NCEHFV L Sbjct: 61 KKELLSVVAGGDNYRVNNKHDDRYTPLPSNKIVKRAEELVGQELPYSLTSDNCEHFVNHL 120 Query: 121 RYGKSRCKQVEKAKVEVGVATAL 143 RYG SR QV A VGVA L Sbjct: 121 RYGVSRSDQVTGAVTTVGVAAGL 143 >gi|16905367 HRAS-like suppressor family, member 5 isoform 1 [Homo sapiens] Length = 279 Score = 149 bits (376), Expect = 1e-36 Identities = 76/141 (53%), Positives = 95/141 (67%), Gaps = 2/141 (1%) Query: 8 PKPGDLIEIFRLGYEHWALYIGDGYVIHLAPPSEYPGAGSSSVFSVLSNSAEVKRERLED 67 P+PGDLIEIFR+GYEHWA+Y+ D V+HLAPPSE GS + S+ SN A VK RLED Sbjct: 130 PRPGDLIEIFRIGYEHWAIYVEDDCVVHLAPPSEEFEVGS--ITSIFSNRAVVKYSRLED 187 Query: 68 VVGGCCYRVNNSLDHEYQPRPVEVIISSAKEMVGQKMKYSIVSRNCEHFVTQLRYGKSRC 127 V+ GC ++VNN LD Y P PV+ II K+MV + ++YS++ NCEHFV LRYG R Sbjct: 188 VLHGCSWKVNNKLDGTYLPLPVDKIIQRTKKMVNKIVQYSLIEGNCEHFVNGLRYGVPRS 247 Query: 128 KQVEKAKVEVGVATALGILVV 148 +QVE A +E A I V Sbjct: 248 QQVEHALMEGAKAAGAVISAV 268 >gi|226491950 HRAS-like suppressor family, member 5 isoform 2 [Homo sapiens] Length = 269 Score = 149 bits (376), Expect = 1e-36 Identities = 76/141 (53%), Positives = 95/141 (67%), Gaps = 2/141 (1%) Query: 8 PKPGDLIEIFRLGYEHWALYIGDGYVIHLAPPSEYPGAGSSSVFSVLSNSAEVKRERLED 67 P+PGDLIEIFR+GYEHWA+Y+ D V+HLAPPSE GS + S+ SN A VK RLED Sbjct: 120 PRPGDLIEIFRIGYEHWAIYVEDDCVVHLAPPSEEFEVGS--ITSIFSNRAVVKYSRLED 177 Query: 68 VVGGCCYRVNNSLDHEYQPRPVEVIISSAKEMVGQKMKYSIVSRNCEHFVTQLRYGKSRC 127 V+ GC ++VNN LD Y P PV+ II K+MV + ++YS++ NCEHFV LRYG R Sbjct: 178 VLHGCSWKVNNKLDGTYLPLPVDKIIQRTKKMVNKIVQYSLIEGNCEHFVNGLRYGVPRS 237 Query: 128 KQVEKAKVEVGVATALGILVV 148 +QVE A +E A I V Sbjct: 238 QQVEHALMEGAKAAGAVISAV 258 >gi|9966859 HRAS-like suppressor [Homo sapiens] Length = 168 Score = 137 bits (345), Expect = 4e-33 Identities = 69/135 (51%), Positives = 91/135 (67%), Gaps = 1/135 (0%) Query: 8 PKPGDLIEIFRLGYEHWALYIGDGYVIHLAPPSEYPGAGSSSVFSVLSNSAEVKRERLED 67 P PGDLIE+FR GY+HWALY+GDGYVI++AP P A +S SV S+ A VK + L+D Sbjct: 15 PCPGDLIEVFRPGYQHWALYLGDGYVINIAPVDGIP-ASFTSAKSVFSSKALVKMQLLKD 73 Query: 68 VVGGCCYRVNNSLDHEYQPRPVEVIISSAKEMVGQKMKYSIVSRNCEHFVTQLRYGKSRC 127 VVG YR+NN D Y P PVE II ++ ++GQ++ Y+++ NCEHFVT LRYG+ Sbjct: 74 VVGNDTYRINNKYDETYPPLPVEEIIKRSEFVIGQEVAYNLLVNNCEHFVTLLRYGEGVS 133 Query: 128 KQVEKAKVEVGVATA 142 +Q +A V TA Sbjct: 134 EQANRAISTVEFVTA 148 >gi|226528146 HRAS-like suppressor family, member 5 isoform 3 [Homo sapiens] Length = 253 Score = 123 bits (309), Expect = 6e-29 Identities = 59/106 (55%), Positives = 76/106 (71%), Gaps = 2/106 (1%) Query: 8 PKPGDLIEIFRLGYEHWALYIGDGYVIHLAPPSEYPGAGSSSVFSVLSNSAEVKRERLED 67 P+PGDLIEIFR+GYEHWA+Y+ D V+HLAPPSE GS + S+ SN A VK RLED Sbjct: 130 PRPGDLIEIFRIGYEHWAIYVEDDCVVHLAPPSEEFEVGS--ITSIFSNRAVVKYSRLED 187 Query: 68 VVGGCCYRVNNSLDHEYQPRPVEVIISSAKEMVGQKMKYSIVSRNC 113 V+ GC ++VNN LD Y P PV+ II K+MV + ++YS++ NC Sbjct: 188 VLHGCSWKVNNKLDGTYLPLPVDKIIQRTKKMVNKIVQYSLIEGNC 233 >gi|46249410 lecithin retinol acyltransferase [Homo sapiens] Length = 230 Score = 56.6 bits (135), Expect = 9e-09 Identities = 38/135 (28%), Positives = 65/135 (48%), Gaps = 15/135 (11%) Query: 11 GDLIEIFRLGYEHWALYIGDGYVIHLAPP-----------SEYPGAGSSSVFSVLSNSAE 59 GD++E+ R H+ +Y+GD V H+ P ++ + + V+ A Sbjct: 48 GDVLEVPRTHLTHYGIYLGDNRVAHMMPDILLALTDDMGRTQKVVSNKRLILGVIVKVAS 107 Query: 60 VKRERLEDVVGGCCYRVNNSLDHEYQPRPV--EVIISSAKEMVGQKMKYSIVSRNCEHFV 117 ++ + +ED G VN+ LD Q + + E + A++++G YS++ NCEHFV Sbjct: 108 IRVDTVEDFAYGANILVNH-LDESLQKKALLNEEVARRAEKLLGFT-PYSLLWNNCEHFV 165 Query: 118 TQLRYGKSRCKQVEK 132 T RYG Q +K Sbjct: 166 TYCRYGTPISPQSDK 180 >gi|28557798 family with sequence similarity 84, member B [Homo sapiens] Length = 310 Score = 51.2 bits (121), Expect = 4e-07 Identities = 39/121 (32%), Positives = 54/121 (44%), Gaps = 22/121 (18%) Query: 9 KPGDLIE-IFRLGYEHWALYIGDGYVIHLAPPSEYPGAGSSSVFSVLSNSAEVKRERLED 67 KPGDL+E + + Y HWA+Y+G+ V+HL + EV L D Sbjct: 117 KPGDLVEFVSQAQYPHWAVYVGNFQVVHL-------------------HRLEVINSFLTD 157 Query: 68 VVGGCCYRVNNSLDHEYQPRPVEVIISSAKEMVGQKMKYSIVSRNCEHFVTQLRYGKSRC 127 G RV N L + Y+P ++ +A VG K + + RN E F RYGK Sbjct: 158 ASQGRRGRVVNDL-YRYKPLSSSAVVRNALAHVGAKER-ELSWRNSESFAAWCRYGKREF 215 Query: 128 K 128 K Sbjct: 216 K 216 >gi|21553329 family with sequence similarity 84, member A [Homo sapiens] Length = 292 Score = 45.1 bits (105), Expect = 3e-05 Identities = 35/128 (27%), Positives = 56/128 (43%), Gaps = 29/128 (22%) Query: 9 KPGDLIEIFRLG--------YEHWALYIGDGYVIHLAPPSEYPGAGSSSVFSVLSNSAEV 60 +PGDL+E+ L HWA+Y+G G +IHL + E+ Sbjct: 121 EPGDLLELLWLQPAPEPPAPAPHWAVYVGGGQIIHL-------------------HQGEI 161 Query: 61 KRERLEDVVGGCCYRVNNSLDHEYQPRPVEVIISSAKEMVGQKMKYSIVSRNCEHFVTQL 120 +++ L + RV NS + Y+P E+++ +A +G K + I N E F Sbjct: 162 RQDSLYEAGAANVGRVVNSW-YRYRPLVAELVVQNACGHLGLKSE-EICWTNSESFAAWC 219 Query: 121 RYGKSRCK 128 R+GK K Sbjct: 220 RFGKREFK 227 >gi|48255931 hepatoma-derived growth factor-related protein 2 isoform 1 [Homo sapiens] Length = 671 Score = 30.0 bits (66), Expect = 0.94 Identities = 17/38 (44%), Positives = 20/38 (52%), Gaps = 5/38 (13%) Query: 9 KPGDLIEIFRLGYEHWALY---IGDGYVIHLAPPSEYP 43 KPGDL+ GY HW I DG V PP++YP Sbjct: 6 KPGDLVFAKMKGYPHWPARIDDIADGAV--KPPPNKYP 41 >gi|6912330 deafness locus associated putative guanine nucleotide exchange factor [Homo sapiens] Length = 458 Score = 30.0 bits (66), Expect = 0.94 Identities = 23/92 (25%), Positives = 41/92 (44%), Gaps = 16/92 (17%) Query: 21 YEHWALYIGDGYVIHLAPPSEYPGAGSSSVFSVLSNSAEVK--RERLEDVVGGCCYRV-- 76 YE W L D ++ PP+ P + L+ + EV E ++GG CY Sbjct: 304 YEGWKLEKQDSFLPCSRPPNSMPSSPHC-----LTGATEVSCGSEHNLAIIGGVCYSWGW 358 Query: 77 -------NNSLDHEYQPRPVEVIISSAKEMVG 101 + + + + P+PV+ ++SS+ +VG Sbjct: 359 NEHGMCGDGTEANVWAPKPVQALLSSSGLLVG 390 >gi|14249158 hepatoma-derived growth factor-related protein 2 isoform 2 [Homo sapiens] Length = 670 Score = 30.0 bits (66), Expect = 0.94 Identities = 17/38 (44%), Positives = 20/38 (52%), Gaps = 5/38 (13%) Query: 9 KPGDLIEIFRLGYEHWALY---IGDGYVIHLAPPSEYP 43 KPGDL+ GY HW I DG V PP++YP Sbjct: 6 KPGDLVFAKMKGYPHWPARIDDIADGAV--KPPPNKYP 41 >gi|30795121 F-box and WD repeat domain containing 8 isoform 2 [Homo sapiens] Length = 532 Score = 28.9 bits (63), Expect = 2.1 Identities = 18/59 (30%), Positives = 27/59 (45%), Gaps = 2/59 (3%) Query: 66 EDVVGGCCYRVNNSLDHEYQPRPVEVIISSAKEMVGQKMKYSIVSRNC--EHFVTQLRY 122 E +V YR+N L Y PV+ I S+ ++ + Y V RN + F T R+ Sbjct: 428 EGLVSVWDYRMNQKLWEVYSGHPVQHISFSSHSLITANVPYQTVMRNADLDSFTTHRRH 486 >gi|30795123 F-box and WD repeat domain containing 8 isoform 1 [Homo sapiens] Length = 598 Score = 28.9 bits (63), Expect = 2.1 Identities = 18/59 (30%), Positives = 27/59 (45%), Gaps = 2/59 (3%) Query: 66 EDVVGGCCYRVNNSLDHEYQPRPVEVIISSAKEMVGQKMKYSIVSRNC--EHFVTQLRY 122 E +V YR+N L Y PV+ I S+ ++ + Y V RN + F T R+ Sbjct: 494 EGLVSVWDYRMNQKLWEVYSGHPVQHISFSSHSLITANVPYQTVMRNADLDSFTTHRRH 552 >gi|7657587 solute carrier family 6 (neurotransmitter transporter, GABA), member 11 [Homo sapiens] Length = 632 Score = 27.7 bits (60), Expect = 4.6 Identities = 24/77 (31%), Positives = 34/77 (44%), Gaps = 13/77 (16%) Query: 25 ALYIGDGYVIHLAPPSEYPGAGSSSVFSVLSNSAEVKRERLEDVVGGCCYRVNNSLDHEY 84 AL +G+G A SE PG G SS + + VKR++ G NN Sbjct: 6 ALPLGNGKAAEEARESEAPGGGCSSGGAAPARHPRVKRDKAVHERG----HWNNK----- 56 Query: 85 QPRPVEVIISSAKEMVG 101 VE ++S A E++G Sbjct: 57 ----VEFVLSVAGEIIG 69 >gi|157388965 schlafen family member 11 [Homo sapiens] Length = 901 Score = 27.7 bits (60), Expect = 4.6 Identities = 18/58 (31%), Positives = 29/58 (50%), Gaps = 5/58 (8%) Query: 63 ERLEDVVGGCCYRVNNSLDHEYQPRPVEVIISSAKEMVGQKMKYSIVSRNCEHFVTQL 120 E++ V C R D Y P+ V V++S+AKE+ + KY ++ + V QL Sbjct: 786 EQIMTCVADTCRRF---FDRGYSPKDVAVLVSTAKEV--EHYKYELLKAMRKKRVVQL 838 >gi|157388963 schlafen family member 11 [Homo sapiens] Length = 901 Score = 27.7 bits (60), Expect = 4.6 Identities = 18/58 (31%), Positives = 29/58 (50%), Gaps = 5/58 (8%) Query: 63 ERLEDVVGGCCYRVNNSLDHEYQPRPVEVIISSAKEMVGQKMKYSIVSRNCEHFVTQL 120 E++ V C R D Y P+ V V++S+AKE+ + KY ++ + V QL Sbjct: 786 EQIMTCVADTCRRF---FDRGYSPKDVAVLVSTAKEV--EHYKYELLKAMRKKRVVQL 838 >gi|157388961 schlafen family member 11 [Homo sapiens] Length = 901 Score = 27.7 bits (60), Expect = 4.6 Identities = 18/58 (31%), Positives = 29/58 (50%), Gaps = 5/58 (8%) Query: 63 ERLEDVVGGCCYRVNNSLDHEYQPRPVEVIISSAKEMVGQKMKYSIVSRNCEHFVTQL 120 E++ V C R D Y P+ V V++S+AKE+ + KY ++ + V QL Sbjct: 786 EQIMTCVADTCRRF---FDRGYSPKDVAVLVSTAKEV--EHYKYELLKAMRKKRVVQL 838 >gi|157388959 schlafen family member 11 [Homo sapiens] Length = 901 Score = 27.7 bits (60), Expect = 4.6 Identities = 18/58 (31%), Positives = 29/58 (50%), Gaps = 5/58 (8%) Query: 63 ERLEDVVGGCCYRVNNSLDHEYQPRPVEVIISSAKEMVGQKMKYSIVSRNCEHFVTQL 120 E++ V C R D Y P+ V V++S+AKE+ + KY ++ + V QL Sbjct: 786 EQIMTCVADTCRRF---FDRGYSPKDVAVLVSTAKEV--EHYKYELLKAMRKKRVVQL 838 >gi|157388957 schlafen family member 11 [Homo sapiens] Length = 901 Score = 27.7 bits (60), Expect = 4.6 Identities = 18/58 (31%), Positives = 29/58 (50%), Gaps = 5/58 (8%) Query: 63 ERLEDVVGGCCYRVNNSLDHEYQPRPVEVIISSAKEMVGQKMKYSIVSRNCEHFVTQL 120 E++ V C R D Y P+ V V++S+AKE+ + KY ++ + V QL Sbjct: 786 EQIMTCVADTCRRF---FDRGYSPKDVAVLVSTAKEV--EHYKYELLKAMRKKRVVQL 838 >gi|209969819 hypothetical protein LOC253143 [Homo sapiens] Length = 2151 Score = 27.7 bits (60), Expect = 4.6 Identities = 18/64 (28%), Positives = 28/64 (43%), Gaps = 1/64 (1%) Query: 34 IHLAP-PSEYPGAGSSSVFSVLSNSAEVKRERLEDVVGGCCYRVNNSLDHEYQPRPVEVI 92 +H P PS P + S+LS + + E V CC +LDH +P ++ Sbjct: 36 LHADPEPSVIPDVKPGASSSLLSQNRALPLELQRTHVESCCEETYETLDHGSEPGRCGLV 95 Query: 93 ISSA 96 S+A Sbjct: 96 DSTA 99 >gi|217416332 trinucleotide repeat containing 6C isoform 1 [Homo sapiens] Length = 1726 Score = 27.3 bits (59), Expect = 6.1 Identities = 17/42 (40%), Positives = 21/42 (50%), Gaps = 5/42 (11%) Query: 20 GYEHWALYIGDGYVIHLAPP--SEYPGAGSSSVFSVLSNSAE 59 G +W + +G G +I PP PGA SSV V SAE Sbjct: 204 GLPNWGMAVGMGAII---PPHLQGLPGANGSSVSQVSGGSAE 242 >gi|33413425 trinucleotide repeat containing 6C isoform 2 [Homo sapiens] Length = 1690 Score = 27.3 bits (59), Expect = 6.1 Identities = 17/42 (40%), Positives = 21/42 (50%), Gaps = 5/42 (11%) Query: 20 GYEHWALYIGDGYVIHLAPP--SEYPGAGSSSVFSVLSNSAE 59 G +W + +G G +I PP PGA SSV V SAE Sbjct: 204 GLPNWGMAVGMGAII---PPHLQGLPGANGSSVSQVSGGSAE 242 >gi|169166558 PREDICTED: similar to hCG18094 [Homo sapiens] Length = 459 Score = 26.9 bits (58), Expect = 7.9 Identities = 23/89 (25%), Positives = 38/89 (42%), Gaps = 2/89 (2%) Query: 44 GAGSSSVFSVLSNSAEVKRERLEDVVGGCCYRVNNSLDHEYQPRPVEVIISSAKEMVGQK 103 GAG S F + K +R E + C R+ L HE + ++ K+ V Q+ Sbjct: 71 GAGDFSEFFEWQKKMQAK-DREEQLAASECRRLQGKLSHEEAVLARQSLMQENKQRVEQQ 129 Query: 104 MKYSIVSRNCEHFVTQLRYGKSRCKQVEK 132 K + + +LR +SR + VE+ Sbjct: 130 -KEQMAKLMLQRAERRLREDRSRKELVEQ 157 >gi|169167297 PREDICTED: similar to hCG18094 [Homo sapiens] Length = 459 Score = 26.9 bits (58), Expect = 7.9 Identities = 23/89 (25%), Positives = 38/89 (42%), Gaps = 2/89 (2%) Query: 44 GAGSSSVFSVLSNSAEVKRERLEDVVGGCCYRVNNSLDHEYQPRPVEVIISSAKEMVGQK 103 GAG S F + K +R E + C R+ L HE + ++ K+ V Q+ Sbjct: 71 GAGDFSEFFEWQKKMQAK-DREEQLAASECRRLQGKLSHEEAVLARQSLMQENKQRVEQQ 129 Query: 104 MKYSIVSRNCEHFVTQLRYGKSRCKQVEK 132 K + + +LR +SR + VE+ Sbjct: 130 -KEQMAKLMLQRAERRLREDRSRKELVEQ 157 >gi|169166473 PREDICTED: similar to hCG18094 [Homo sapiens] Length = 459 Score = 26.9 bits (58), Expect = 7.9 Identities = 23/89 (25%), Positives = 38/89 (42%), Gaps = 2/89 (2%) Query: 44 GAGSSSVFSVLSNSAEVKRERLEDVVGGCCYRVNNSLDHEYQPRPVEVIISSAKEMVGQK 103 GAG S F + K +R E + C R+ L HE + ++ K+ V Q+ Sbjct: 71 GAGDFSEFFEWQKKMQAK-DREEQLAASECRRLQGKLSHEEAVLARQSLMQENKQRVEQQ 129 Query: 104 MKYSIVSRNCEHFVTQLRYGKSRCKQVEK 132 K + + +LR +SR + VE+ Sbjct: 130 -KEQMAKLMLQRAERRLREDRSRKELVEQ 157 >gi|212720861 tubulin tyrosine ligase-like family, member 11 a [Homo sapiens] Length = 800 Score = 26.9 bits (58), Expect = 7.9 Identities = 18/49 (36%), Positives = 25/49 (51%), Gaps = 5/49 (10%) Query: 4 PHQEPKPGDLIEIFRLGYEHWALYIGDGYVIHLAPPSEYPGAGSSSVFS 52 P+QEP P +L IF + +++L I G IH S+ GS FS Sbjct: 416 PYQEPTPKNLHRIF-MHLTNYSLNIHSGNFIH----SDSASTGSKRTFS 459 >gi|89363028 tubulin tyrosine ligase-like family, member 11 b [Homo sapiens] Length = 538 Score = 26.9 bits (58), Expect = 7.9 Identities = 18/49 (36%), Positives = 25/49 (51%), Gaps = 5/49 (10%) Query: 4 PHQEPKPGDLIEIFRLGYEHWALYIGDGYVIHLAPPSEYPGAGSSSVFS 52 P+QEP P +L IF + +++L I G IH S+ GS FS Sbjct: 416 PYQEPTPKNLHRIF-MHLTNYSLNIHSGNFIH----SDSASTGSKRTFS 459 Database: hs.faa Posted date: Aug 4, 2009 4:42 PM Number of letters in database: 18,247,518 Number of sequences in database: 37,866 Lambda K H 0.318 0.134 0.399 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 6,397,320 Number of Sequences: 37866 Number of extensions: 266941 Number of successful extensions: 612 Number of sequences better than 10.0: 30 Number of HSP's better than 10.0 without gapping: 14 Number of HSP's successfully gapped in prelim test: 16 Number of HSP's that attempted gapping in prelim test: 593 Number of HSP's gapped (non-prelim): 30 length of query: 164 length of database: 18,247,518 effective HSP length: 94 effective length of query: 70 effective length of database: 14,688,114 effective search space: 1028167980 effective search space used: 1028167980 T: 11 A: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 58 (26.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.