Guide to the Human Genome
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Name: SLFN11 Sequence: fasta or formatted (901aa) NCBI GI: 157388965
Description:

schlafen family member 11

Referenced in:

T cells

Other entries for this name:
alt mRNA [901aa] schlafen family member 11
alt mRNA [901aa] schlafen family member 11
alt mRNA [901aa] schlafen family member 11
alt mRNA [901aa] schlafen family member 11
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.3         48           2
 C cysteine            3.0         27           2
 D aspartate           4.8         43           2
 E glutamate           7.5         68           2
 F phenylalanine       4.7         42           2
 G glycine             5.5         50           3
 H histidine           2.1         19           1
 I isoleucine          5.7         51           1
 K lysine              6.2         56           2
 L leucine            10.5         95           2
 M methionine          2.1         19           2
 N asparagine          3.0         27           1
 P proline             5.7         51           2
 Q glutamine           5.0         45           2
 R arginine            6.5         59           2
 S serine              7.2         65           3
 T threonine           4.0         36           2
 V valine              6.5         59           2
 W tryptophan          1.0          9           1
 Y tyrosine            3.6         32           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   schlafen family member 11 
SLFN11                1.000   schlafen family member 11 
SLFN11                1.000   schlafen family member 11 
SLFN11                1.000   schlafen family member 11 
SLFN11                1.000   schlafen family member 11 
SLFN13                0.735   schlafen family member 13 
SLFN5                 0.458   schlafen family member 5 
SLFN14                0.367   schlafen family member 14 
SLFN12                0.187   schlafen family member 12 
SLFN12L               0.178   schlafen family member 12-like 
SLFNL1                0.008   schlafen-like 1 
RGNEF                 0.006   Rho-guanine nucleotide exchange factor 
PPFIBP2               0.004   PTPRF interacting protein, binding protein 2 (lipri...
UPF3B                 0.004   UPF3 regulator of nonsense transcripts homolog B iso...
UPF3B                 0.004   UPF3 regulator of nonsense transcripts homolog B iso...
AK5                   0.004   adenylate kinase 5 isoform 1 
AK5                   0.004   adenylate kinase 5 isoform 2 
ATAD3C                0.004   ATPase family, AAA domain containing 3C 
CNGB1                 0.003   cyclic nucleotide gated channel beta 1 isoform a [H...
NLRP8                 0.003   NLR family, pyrin domain containing 8 
MARK1                 0.003   MAP/microtubule affinity-regulating kinase 1 
PDHA2                 0.003   pyruvate dehydrogenase E1 alpha 2 
CDC2L5                0.003   cell division cycle 2-like 5 isoform 1 
CDC2L5                0.003   cell division cycle 2-like 5 isoform 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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