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Search of human proteins with 149408117
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|149408117 hypothetical protein LOC124783 [Homo sapiens]
(384 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|149408117 hypothetical protein LOC124783 [Homo sapiens] 774 0.0
gi|148806928 hypothetical protein LOC57482 [Homo sapiens] 45 1e-04
gi|148612838 hypothetical protein LOC158358 [Homo sapiens] 38 0.013
gi|21071070 transmembrane channel-like 1 [Homo sapiens] 37 0.023
gi|112382226 atrophin-1 like protein isoform b [Homo sapiens] 37 0.039
gi|112382224 atrophin-1 like protein isoform a [Homo sapiens] 37 0.039
gi|112382216 atrophin-1 like protein isoform a [Homo sapiens] 37 0.039
gi|148762969 myeloid/lymphoid or mixed-lineage leukemia 2 [Homo ... 36 0.051
gi|91208418 transcription elongation regulator 1 isoform 2 [Homo... 36 0.051
gi|21327715 transcription elongation regulator 1 isoform 1 [Homo... 36 0.051
gi|22212925 nuclear transcription factor, X-box binding 1 isofor... 36 0.067
gi|208431781 cyclic nucleotide gated channel beta 1 isoform b [H... 35 0.087
gi|114205399 cyclic nucleotide gated channel beta 1 isoform a [H... 35 0.087
gi|239508790 PREDICTED: hypothetical protein, partial [Homo sapi... 35 0.087
gi|4505419 nucleolar protein 3 [Homo sapiens] 35 0.087
gi|41152076 steroid-sensitive protein 1 [Homo sapiens] 35 0.11
gi|41152074 steroid-sensitive protein 1 [Homo sapiens] 35 0.11
gi|169172081 PREDICTED: hypothetical protein [Homo sapiens] 35 0.15
gi|169170823 PREDICTED: hypothetical protein [Homo sapiens] 35 0.15
gi|47717125 intersectin 1 isoform ITSN-s [Homo sapiens] 35 0.15
gi|47717123 intersectin 1 isoform ITSN-l [Homo sapiens] 35 0.15
gi|194294554 SET binding protein 1 isoform a [Homo sapiens] 35 0.15
gi|91208437 GEM interacting protein [Homo sapiens] 35 0.15
gi|115298682 HBxAg transactivated protein 2 [Homo sapiens] 35 0.15
gi|91208420 bassoon protein [Homo sapiens] 34 0.19
gi|16418457 solute carrier family 26, member 8 isoform a [Homo s... 34 0.19
gi|20336285 solute carrier family 26, member 8 isoform b [Homo s... 34 0.19
gi|14269566 megakaryoblastic leukemia 1 protein [Homo sapiens] 34 0.25
gi|238859557 regulatory factor X1 [Homo sapiens] 33 0.33
gi|222418647 mucin 7, secreted precursor [Homo sapiens] 33 0.33
>gi|149408117 hypothetical protein LOC124783 [Homo sapiens]
Length = 384
Score = 774 bits (1999), Expect = 0.0
Identities = 384/384 (100%), Positives = 384/384 (100%)
Query: 1 MGVTGAHGFPCCGKGSVEVAEMRDDLSQHQIQEEQELEADMLEQKPQLQVDLDLDPDPDP 60
MGVTGAHGFPCCGKGSVEVAEMRDDLSQHQIQEEQELEADMLEQKPQLQVDLDLDPDPDP
Sbjct: 1 MGVTGAHGFPCCGKGSVEVAEMRDDLSQHQIQEEQELEADMLEQKPQLQVDLDLDPDPDP 60
Query: 61 DPELEIGQVPALLESELYPALKLEAELDTEANSNEESDFEEPMQLVCKIESVHSNMGLPT 120
DPELEIGQVPALLESELYPALKLEAELDTEANSNEESDFEEPMQLVCKIESVHSNMGLPT
Sbjct: 61 DPELEIGQVPALLESELYPALKLEAELDTEANSNEESDFEEPMQLVCKIESVHSNMGLPT 120
Query: 121 PQTFRPWSLNSNCRSFTEENHVSACHHSISAQTSKHLFWANKLIQASEHSLQRAINMQLN 180
PQTFRPWSLNSNCRSFTEENHVSACHHSISAQTSKHLFWANKLIQASEHSLQRAINMQLN
Sbjct: 121 PQTFRPWSLNSNCRSFTEENHVSACHHSISAQTSKHLFWANKLIQASEHSLQRAINMQLN 180
Query: 181 NGSAGQPIRSPLREAIPTNALCSEEQLQIPDAHSAPPTTSSQAPSPLLSSDLPPPIDLTE 240
NGSAGQPIRSPLREAIPTNALCSEEQLQIPDAHSAPPTTSSQAPSPLLSSDLPPPIDLTE
Sbjct: 181 NGSAGQPIRSPLREAIPTNALCSEEQLQIPDAHSAPPTTSSQAPSPLLSSDLPPPIDLTE 240
Query: 241 LITFASSLAMASSSRMDLPSLEHMMKAPPQEALEPSTEPLLTTVEEREPENHAETLPEKP 300
LITFASSLAMASSSRMDLPSLEHMMKAPPQEALEPSTEPLLTTVEEREPENHAETLPEKP
Sbjct: 241 LITFASSLAMASSSRMDLPSLEHMMKAPPQEALEPSTEPLLTTVEEREPENHAETLPEKP 300
Query: 301 REARAPLKSWSQEDKNFAQSYFDFSKPGIKRATIKGQIQLLQPPATSPLLQGSKEDSVPP 360
REARAPLKSWSQEDKNFAQSYFDFSKPGIKRATIKGQIQLLQPPATSPLLQGSKEDSVPP
Sbjct: 301 REARAPLKSWSQEDKNFAQSYFDFSKPGIKRATIKGQIQLLQPPATSPLLQGSKEDSVPP 360
Query: 361 GKEKENPLLVKIHFKLSAPTIPEK 384
GKEKENPLLVKIHFKLSAPTIPEK
Sbjct: 361 GKEKENPLLVKIHFKLSAPTIPEK 384
>gi|148806928 hypothetical protein LOC57482 [Homo sapiens]
Length = 1233
Score = 45.1 bits (105), Expect = 1e-04
Identities = 84/384 (21%), Positives = 133/384 (34%), Gaps = 72/384 (18%)
Query: 34 EQELEADMLEQKPQLQVDLDLDPDPDPDPELEIGQVPA---------------------- 71
+Q EA+ + ++P L + P P P E+G+ P
Sbjct: 737 KQSTEAESIRKRPMLGPSEETAPQPPPAGVRELGKGPEKSEMHREPADTTEGCKFAKDLP 796
Query: 72 --LLESELYPALKLEA--ELDTEANSNEESDFEEPMQLVCKIESVHSNMGLPTPQTFRPW 127
L+ S YP K+ A E T ++S + +P ++ E S G+ +T +
Sbjct: 797 SFLVPSLPYPPQKVVAHTEFTTSSDSETANGIAKPDPVMPGGEEKASPFGIKLRRT--NY 854
Query: 128 SLNSNCRSFTEENHVSACHHSISAQTSKHLFWANKLIQASEHSLQRAINMQLNNGSAGQP 187
SL NC E+ HS + ++ A S + + L +G P
Sbjct: 855 SLRFNCDQQAEQKKKK--RHSSTGDSAD----AGPPAAGSARGEKEMEGVALKHG----P 904
Query: 188 IRSPLREAIPTNALCSEE---QLQIPDAHSAPPTTSSQAPSPL--LSSDLPPPIDLTELI 242
R+ P+ S E +P AH PP SSQ P+P +++ P L
Sbjct: 905 SLPQERKQAPSTRRDSAEPSSSRSVPVAHPGPPPASSQTPAPEHDKAANKMPLAQKPALA 964
Query: 243 TFASSLAMASS--SRMDLPSLEHMMKAPPQEALEPSTEPLLTTVEEREPENHAETLPEKP 300
+S +S S++ P L ++ + A P EP + E++E + P P
Sbjct: 965 PKPTSQTPPASPLSKLSRPYLVELLS---RRAGRPDPEPSEPSKEDQESSDRRPPSPPGP 1021
Query: 301 REARAPLKSWSQEDKNFAQSYFDFSKPGIKRATIKGQIQLLQPPATSPLLQGSKEDSVPP 360
E + + +E KP PP P Q K P
Sbjct: 1022 EERKGQKRDEEEEATE--------RKPA-------------SPPL--PATQQEKPSQTPE 1058
Query: 361 GKEKENPLLVKIHFKLSAPTIPEK 384
KE P+L H L + EK
Sbjct: 1059 AGRKEKPMLQSRH-SLDGSKLTEK 1081
>gi|148612838 hypothetical protein LOC158358 [Homo sapiens]
Length = 2103
Score = 38.1 bits (87), Expect = 0.013
Identities = 35/123 (28%), Positives = 56/123 (45%), Gaps = 13/123 (10%)
Query: 168 EHSLQRAINMQLNNGSAGQPIRSPLREAIPTNALCS-EEQLQIPDAHSAPPTTSSQAPSP 226
++S Q+ I + NN +GQP++ PLR PT + S IP H++P ++ A P
Sbjct: 1937 DNSAQK-ITLASNNSLSGQPLQHPLRS--PTKFINSFGNASSIPTVHTSPQLINTTAKVP 1993
Query: 227 LLSSDLPPPIDLTELITF----ASSLAMASSSRMDLPSLEHMMKAPPQEALEPSTEPLLT 282
+PPP+ L + A+ LA S PS + + L+P + LL
Sbjct: 1994 -----VPPPVPTVSLTSVIKSPATLLAKTSLVSAICPSNPPLPSSTSVFHLDPPVKKLLV 2048
Query: 283 TVE 285
+ E
Sbjct: 2049 SPE 2051
>gi|21071070 transmembrane channel-like 1 [Homo sapiens]
Length = 760
Score = 37.4 bits (85), Expect = 0.023
Identities = 25/103 (24%), Positives = 50/103 (48%), Gaps = 6/103 (5%)
Query: 14 KGSVEVAEMRDDLSQHQIQEEQELEADMLEQ---KPQLQVDLDLDPDPDPDPELEIGQVP 70
K ++V E D+ + +EE+E+E + + +P+ + D+ + DP+PE E +
Sbjct: 5 KVQIKVEEKEDETEESSSEEEEEVEDKLPRRESLRPKRKRTRDVINEDDPEPEPEDEETR 64
Query: 71 ALLESELYPALKL---EAELDTEANSNEESDFEEPMQLVCKIE 110
E E LK E E+D E +++ +E Q++ ++
Sbjct: 65 KAREKERRRRLKRGAEEEEIDEEELERLKAELDEKRQIIATVK 107
>gi|112382226 atrophin-1 like protein isoform b [Homo sapiens]
Length = 1012
Score = 36.6 bits (83), Expect = 0.039
Identities = 46/182 (25%), Positives = 62/182 (34%), Gaps = 35/182 (19%)
Query: 187 PIRSPLREAIPTNALCSEEQLQIPDAHSAPPTTSSQAPSPL-LSSDLPPPIDLTELITFA 245
P+ P + PT + QL P AH PP S PSP ++++LPPP L L
Sbjct: 368 PLAMPHIKPPPTTPI---PQLPAPQAHKHPPHLS--GPSPFSMNANLPPPPALKPL---- 418
Query: 246 SSLAMASSSRMDLPSLEHMMKAPPQEALEPSTEPLLTTVEEREPENHAETLPEKPREARA 305
SS P H PP L P ++PL ++ + ++ LP P
Sbjct: 419 ------SSLSTHHPPSAH----PPPLQLMPQSQPLPSSPAQPPGLTQSQNLPPPPASHPP 468
Query: 306 PLKSWSQEDKNFAQSYFDFSKPGIKRATIKGQIQLLQPPATSPLLQGSKEDSVPPGKEKE 365
FAQ F P PP T P + PG +
Sbjct: 469 TGLHQVAPQPPFAQHPFVPGGP---------------PPITPPTCPSTSTPPAGPGTSAQ 513
Query: 366 NP 367
P
Sbjct: 514 PP 515
>gi|112382224 atrophin-1 like protein isoform a [Homo sapiens]
Length = 1566
Score = 36.6 bits (83), Expect = 0.039
Identities = 46/182 (25%), Positives = 62/182 (34%), Gaps = 35/182 (19%)
Query: 187 PIRSPLREAIPTNALCSEEQLQIPDAHSAPPTTSSQAPSPL-LSSDLPPPIDLTELITFA 245
P+ P + PT + QL P AH PP S PSP ++++LPPP L L
Sbjct: 922 PLAMPHIKPPPTTPI---PQLPAPQAHKHPPHLS--GPSPFSMNANLPPPPALKPL---- 972
Query: 246 SSLAMASSSRMDLPSLEHMMKAPPQEALEPSTEPLLTTVEEREPENHAETLPEKPREARA 305
SS P H PP L P ++PL ++ + ++ LP P
Sbjct: 973 ------SSLSTHHPPSAH----PPPLQLMPQSQPLPSSPAQPPGLTQSQNLPPPPASHPP 1022
Query: 306 PLKSWSQEDKNFAQSYFDFSKPGIKRATIKGQIQLLQPPATSPLLQGSKEDSVPPGKEKE 365
FAQ F P PP T P + PG +
Sbjct: 1023 TGLHQVAPQPPFAQHPFVPGGP---------------PPITPPTCPSTSTPPAGPGTSAQ 1067
Query: 366 NP 367
P
Sbjct: 1068 PP 1069
>gi|112382216 atrophin-1 like protein isoform a [Homo sapiens]
Length = 1566
Score = 36.6 bits (83), Expect = 0.039
Identities = 46/182 (25%), Positives = 62/182 (34%), Gaps = 35/182 (19%)
Query: 187 PIRSPLREAIPTNALCSEEQLQIPDAHSAPPTTSSQAPSPL-LSSDLPPPIDLTELITFA 245
P+ P + PT + QL P AH PP S PSP ++++LPPP L L
Sbjct: 922 PLAMPHIKPPPTTPI---PQLPAPQAHKHPPHLS--GPSPFSMNANLPPPPALKPL---- 972
Query: 246 SSLAMASSSRMDLPSLEHMMKAPPQEALEPSTEPLLTTVEEREPENHAETLPEKPREARA 305
SS P H PP L P ++PL ++ + ++ LP P
Sbjct: 973 ------SSLSTHHPPSAH----PPPLQLMPQSQPLPSSPAQPPGLTQSQNLPPPPASHPP 1022
Query: 306 PLKSWSQEDKNFAQSYFDFSKPGIKRATIKGQIQLLQPPATSPLLQGSKEDSVPPGKEKE 365
FAQ F P PP T P + PG +
Sbjct: 1023 TGLHQVAPQPPFAQHPFVPGGP---------------PPITPPTCPSTSTPPAGPGTSAQ 1067
Query: 366 NP 367
P
Sbjct: 1068 PP 1069
>gi|148762969 myeloid/lymphoid or mixed-lineage leukemia 2 [Homo
sapiens]
Length = 5537
Score = 36.2 bits (82), Expect = 0.051
Identities = 49/184 (26%), Positives = 67/184 (36%), Gaps = 26/184 (14%)
Query: 188 IRSPLREAIPTNALCSEEQLQIPDAHSAPPTTSSQAPSPLLSSDLPPPIDLTELITFASS 247
+ +PL E +P E L S PP S +P P S PPP +L AS
Sbjct: 430 LEAPLNEEMPLLPPPEESPL------SPPPEESPTSPPPEASRLSPPPEELP-----ASP 478
Query: 248 LAMA-------SSSRMDLPSLEHMMKAPPQEA-LEPSTEPLLTTVEEREPENHAETLPEK 299
L A S + P E + PP+ + P E L+ EE P ET
Sbjct: 479 LPEALHLSRPLEESPLSPPPEESPLSPPPESSPFSPLEESPLSPPEESPPSPALETPLSP 538
Query: 300 PREARAPLKSWSQEDKNFAQSYFDFSKPGIKRATIKGQIQLLQPPATSPLLQGSKEDSVP 359
P EA +PL F +S + + +L PP SP+ +E +
Sbjct: 539 PPEA-SPL------SPPFEESPLSPPPEELPTSPPPEASRLSPPPEESPMSPPPEESPMS 591
Query: 360 PGKE 363
P E
Sbjct: 592 PPPE 595
Score = 32.7 bits (73), Expect = 0.56
Identities = 31/106 (29%), Positives = 40/106 (37%), Gaps = 26/106 (24%)
Query: 207 LQIPDAHSAPPTTSSQAPSPLLSSDLPPPID-LTELITFASSLAMASSSRMDLPSLEHMM 265
L + + PP S PSPL S PP + L EL T
Sbjct: 4901 LDVRQLSAPPPEEPSPPPSPLAPSPASPPTEPLVELPT---------------------- 4938
Query: 266 KAPPQEALEPSTEPLLTTVEEREPENHAETLPEKPREARAP-LKSW 310
P E PS PL ++ E P+ A PE+ ++R P LK W
Sbjct: 4939 -EPLAEPPVPSPLPLASSPESARPKPRARP-PEEGEDSRPPRLKKW 4982
Score = 29.6 bits (65), Expect = 4.8
Identities = 26/93 (27%), Positives = 40/93 (43%), Gaps = 9/93 (9%)
Query: 214 SAPPTTSSQAPSPLLSSDLPPPIDLTELITFASSLAMASSSRMDLPSLEHMMKAPPQEAL 273
S PP S +P P S PPP ++ S L + SR+ P E + PP+E+
Sbjct: 627 SPPPEDSPMSPPPEESPMSPPP-----EVSRLSPLPVV--SRLSPPPEESPLSPPPEES- 678
Query: 274 EPSTEPLLTTVEEREPENHAETLPEKPREARAP 306
P++ P + PE+ + P + A P
Sbjct: 679 -PTSPPPEASRLSPPPEDSPTSPPPEDSPASPP 710
Score = 29.6 bits (65), Expect = 4.8
Identities = 25/92 (27%), Positives = 42/92 (45%), Gaps = 7/92 (7%)
Query: 214 SAPPTTSSQAPSPLLSSDLPPPID--LTELITFASSLAMASSSRMDLPSLEHMMKAPPQE 271
S PP S +P P++S PPP + L+ + + +SR+ P + PP++
Sbjct: 645 SPPPEVSRLSPLPVVSRLSPPPEESPLSPPPEESPTSPPPEASRLSPPPEDSPTSPPPED 704
Query: 272 --ALEPSTEPLLTTVEEREPENHAETLPEKPR 301
A P + L++ E P LPE+P+
Sbjct: 705 SPASPPPEDSLMSLPLEESP---LLPLPEEPQ 733
Score = 29.3 bits (64), Expect = 6.2
Identities = 26/96 (27%), Positives = 37/96 (38%), Gaps = 2/96 (2%)
Query: 205 EQLQIPDAHSAPPTTSSQAPSPLLSSDLPPPIDLTELITFAS-SLAMASSSRMDLP-SLE 262
E++ P+ + P+ +S PSP+ P P L F+ A +D P S
Sbjct: 1076 EKVSEPECPALEPSATSPLPSPMGDLSCPAPSPAPALDDFSGLGEDTAPLDGIDAPGSQP 1135
Query: 263 HMMKAPPQEALEPSTEPLLTTVEEREPENHAETLPE 298
+ P A E P+L EE P E PE
Sbjct: 1136 EPGQTPGSLASELKGSPVLLDPEELAPVTPMEVYPE 1171
>gi|91208418 transcription elongation regulator 1 isoform 2 [Homo
sapiens]
Length = 1077
Score = 36.2 bits (82), Expect = 0.051
Identities = 25/94 (26%), Positives = 39/94 (41%)
Query: 204 EEQLQIPDAHSAPPTTSSQAPSPLLSSDLPPPIDLTELITFASSLAMASSSRMDLPSLEH 263
+ Q+Q ++ PTTSS AP+ S+ P T T A+S+A S+
Sbjct: 248 QAQVQAQAVGASTPTTSSPAPAVSTSTSSSTPSSTTSTTTTATSVAQTVSTPTTQDQTPS 307
Query: 264 MMKAPPQEALEPSTEPLLTTVEEREPENHAETLP 297
+ + ST T + P+ H +TLP
Sbjct: 308 SAVSVATPTVSVSTPAPTATPVQTVPQPHPQTLP 341
>gi|21327715 transcription elongation regulator 1 isoform 1 [Homo
sapiens]
Length = 1098
Score = 36.2 bits (82), Expect = 0.051
Identities = 25/94 (26%), Positives = 39/94 (41%)
Query: 204 EEQLQIPDAHSAPPTTSSQAPSPLLSSDLPPPIDLTELITFASSLAMASSSRMDLPSLEH 263
+ Q+Q ++ PTTSS AP+ S+ P T T A+S+A S+
Sbjct: 248 QAQVQAQAVGASTPTTSSPAPAVSTSTSSSTPSSTTSTTTTATSVAQTVSTPTTQDQTPS 307
Query: 264 MMKAPPQEALEPSTEPLLTTVEEREPENHAETLP 297
+ + ST T + P+ H +TLP
Sbjct: 308 SAVSVATPTVSVSTPAPTATPVQTVPQPHPQTLP 341
>gi|22212925 nuclear transcription factor, X-box binding 1 isoform 2
[Homo sapiens]
Length = 1024
Score = 35.8 bits (81), Expect = 0.067
Identities = 27/96 (28%), Positives = 45/96 (46%), Gaps = 7/96 (7%)
Query: 15 GSVEVAEMRDDLSQHQIQEEQELEADMLEQKPQLQVDLDLDPDPDPDPELEIGQVPALLE 74
GSVE++++ HQ + E + E LE+K +L + D DP G
Sbjct: 927 GSVEISKLITKKEVHQARLECDEECSALERKKRLAEAFHISEDSDPFNIRSSG------- 979
Query: 75 SELYPALKLEAELDTEANSNEESDFEEPMQLVCKIE 110
S+ +LK +A D + S+ E + E ++ V K+E
Sbjct: 980 SKFSDSLKEDARKDLKFVSDVEKEMETLVEAVNKVE 1015
>gi|208431781 cyclic nucleotide gated channel beta 1 isoform b [Homo
sapiens]
Length = 299
Score = 35.4 bits (80), Expect = 0.087
Identities = 53/252 (21%), Positives = 89/252 (35%), Gaps = 32/252 (12%)
Query: 74 ESELYPALKLEAELDTEANSNEESDFEEPMQLVCKIESVHSNMGLPTPQTFRPWSLNSNC 133
E E+ P ++EAE++ E N E E M + + P+PQ + +L S
Sbjct: 24 EEEVEPEPEMEAEVEPEPNPEEAETESESMPPEESFKEEEVAVADPSPQETKEAALTSTI 83
Query: 134 RSFTEENHVSACHHSISAQTSKHLFW----ANKLIQASEHSLQRAINMQLNNGSAGQPIR 189
+ +S +++ + + L W K+I HS+ L +GS G
Sbjct: 84 SLRAQGAEIS----EMNSPSRRVLTWLMKGVEKVIPQPVHSITEDPAQILGHGSTG---- 135
Query: 190 SPLREAIPTNALCSEEQLQIPDAHSAPPTTSSQA-PSPLLSSDLPPPIDLTELITFASSL 248
+ C++E + +A P L LP P +E+ ++
Sbjct: 136 ---------DTGCTDEPNEALEAQDTRPGLRLLLWLEQNLERVLPQPPKSSEVWRDEPAV 186
Query: 249 AMASSSRMDLPSLEHMM----------KAPPQEALEPSTEPLLTTVEEREPENHAETLPE 298
A ++S P M P L+P EP E +P + A+T
Sbjct: 187 ATGAASDPAPPGRPQEMGPKLQARETPSLPTPIPLQPKEEPKEAPAPEPQPGSQAQTSSL 246
Query: 299 KPREARAPLKSW 310
P A L +W
Sbjct: 247 PPTRDPARLVAW 258
>gi|114205399 cyclic nucleotide gated channel beta 1 isoform a [Homo
sapiens]
Length = 1251
Score = 35.4 bits (80), Expect = 0.087
Identities = 53/252 (21%), Positives = 89/252 (35%), Gaps = 32/252 (12%)
Query: 74 ESELYPALKLEAELDTEANSNEESDFEEPMQLVCKIESVHSNMGLPTPQTFRPWSLNSNC 133
E E+ P ++EAE++ E N E E M + + P+PQ + +L S
Sbjct: 24 EEEVEPEPEMEAEVEPEPNPEEAETESESMPPEESFKEEEVAVADPSPQETKEAALTSTI 83
Query: 134 RSFTEENHVSACHHSISAQTSKHLFW----ANKLIQASEHSLQRAINMQLNNGSAGQPIR 189
+ +S +++ + + L W K+I HS+ L +GS G
Sbjct: 84 SLRAQGAEIS----EMNSPSRRVLTWLMKGVEKVIPQPVHSITEDPAQILGHGSTG---- 135
Query: 190 SPLREAIPTNALCSEEQLQIPDAHSAPPTTSSQA-PSPLLSSDLPPPIDLTELITFASSL 248
+ C++E + +A P L LP P +E+ ++
Sbjct: 136 ---------DTGCTDEPNEALEAQDTRPGLRLLLWLEQNLERVLPQPPKSSEVWRDEPAV 186
Query: 249 AMASSSRMDLPSLEHMM----------KAPPQEALEPSTEPLLTTVEEREPENHAETLPE 298
A ++S P M P L+P EP E +P + A+T
Sbjct: 187 ATGAASDPAPPGRPQEMGPKLQARETPSLPTPIPLQPKEEPKEAPAPEPQPGSQAQTSSL 246
Query: 299 KPREARAPLKSW 310
P A L +W
Sbjct: 247 PPTRDPARLVAW 258
>gi|239508790 PREDICTED: hypothetical protein, partial [Homo
sapiens]
Length = 490
Score = 35.4 bits (80), Expect = 0.087
Identities = 41/160 (25%), Positives = 57/160 (35%), Gaps = 28/160 (17%)
Query: 226 PLLSSDLPPPIDLTELITFASSLAMASSSRMDLPSLEHMMKAPPQEALEPSTEPLLTTVE 285
PLLS PP D+ L + SL+ S D+PSL + +PP + PS P L +
Sbjct: 219 PLLSDVPSPPSDVPSLPSDVPSLSGVPSPPSDVPSLLSGVPSPPSDISPPSDVPSLLS-- 276
Query: 286 EREPENHAETLPEKPREARAPLKSWSQEDKNFAQSYFDFSKPGIKRATIKGQIQLLQPPA 345
+P P + + L + D P + PP+
Sbjct: 277 ---------DVPSLPSDVPSLLSGVPSPPSDVPSLLSDVPSP---------PSDVPSPPS 318
Query: 346 TSPLLQG--SKEDSVP------PGKEKENPLLVKIHFKLS 377
PLL G S VP P + PLL + LS
Sbjct: 319 DIPLLSGVPSPPSDVPSPPSDVPSPPSDVPLLSGVPSPLS 358
Score = 28.9 bits (63), Expect = 8.1
Identities = 20/62 (32%), Positives = 29/62 (46%), Gaps = 8/62 (12%)
Query: 225 SPLLSSDLPPPIDLTELITFASSLAMASSS--------RMDLPSLEHMMKAPPQEALEPS 276
SPLLS PP D+ L++ SL SS D+PSL + +PP + P
Sbjct: 108 SPLLSGVPSPPSDVPSLLSGVPSLPSDVSSPPSDVPSLLSDVPSLLSGVPSPPSDVPSPP 167
Query: 277 TE 278
++
Sbjct: 168 SD 169
>gi|4505419 nucleolar protein 3 [Homo sapiens]
Length = 208
Score = 35.4 bits (80), Expect = 0.087
Identities = 20/59 (33%), Positives = 32/59 (54%), Gaps = 9/59 (15%)
Query: 43 EQKPQLQVDLDLDPDPDPDPELEIGQVPALLESELYPALKLEAELDTEANSNEESDFEE 101
E +P+L+ + + +P+P+PE E+ E+E P E EL+ E + E DFEE
Sbjct: 152 EPEPELEAEASKEAEPEPEPEPELEP-----EAEAEP----EPELEPEPDPEPEPDFEE 201
Score = 28.9 bits (63), Expect = 8.1
Identities = 15/59 (25%), Positives = 27/59 (45%)
Query: 5 GAHGFPCCGKGSVEVAEMRDDLSQHQIQEEQELEADMLEQKPQLQVDLDLDPDPDPDPE 63
G G G+ E E + + E + LE + + + + +L+P+PDP+PE
Sbjct: 138 GPEGSEAVQSGTPEEPEPELEAEASKEAEPEPEPEPELEPEAEAEPEPELEPEPDPEPE 196
>gi|41152076 steroid-sensitive protein 1 [Homo sapiens]
Length = 950
Score = 35.0 bits (79), Expect = 0.11
Identities = 42/183 (22%), Positives = 68/183 (37%), Gaps = 18/183 (9%)
Query: 198 TNALCSEEQLQIPDAHSAPPTTSS--QAPSPLLSSDLPPPIDLTELITFASSLAMASSSR 255
T A + ++ P PPTT+ A P +S +L PP + + S +
Sbjct: 378 TTAFPTTQRPWTPSPSHRPPTTTEVITARRPSVSENLYPPSRKDQHRERPQTTRRPSKAT 437
Query: 256 MDLPSLEHMMKAPPQEALEPSTEP-----LLTTVEEREPENHAE--TLPEKPREARAPLK 308
SLE APP EPST +R H + +P P+ A+
Sbjct: 438 ----SLESFTNAPPTTISEPSTRAAGPGRFRDNRMDRREHGHRDPNVVPGPPKPAKEKPP 493
Query: 309 SWSQEDKNFAQSY---FDFSKPGIKRATIKGQIQLLQPPATSPLLQGSKEDSVPPGKEKE 365
+DK + Y +D S+P + ++ ++Q+ P E P KEK+
Sbjct: 494 KKKAQDKILSNEYEEKYDLSRP--TASQLEDELQVGNVPLKKAKESKKHEKLEKPEKEKK 551
Query: 366 NPL 368
+
Sbjct: 552 KKM 554
>gi|41152074 steroid-sensitive protein 1 [Homo sapiens]
Length = 950
Score = 35.0 bits (79), Expect = 0.11
Identities = 42/183 (22%), Positives = 68/183 (37%), Gaps = 18/183 (9%)
Query: 198 TNALCSEEQLQIPDAHSAPPTTSS--QAPSPLLSSDLPPPIDLTELITFASSLAMASSSR 255
T A + ++ P PPTT+ A P +S +L PP + + S +
Sbjct: 378 TTAFPTTQRPWTPSPSHRPPTTTEVITARRPSVSENLYPPSRKDQHRERPQTTRRPSKAT 437
Query: 256 MDLPSLEHMMKAPPQEALEPSTEP-----LLTTVEEREPENHAE--TLPEKPREARAPLK 308
SLE APP EPST +R H + +P P+ A+
Sbjct: 438 ----SLESFTNAPPTTISEPSTRAAGPGRFRDNRMDRREHGHRDPNVVPGPPKPAKEKPP 493
Query: 309 SWSQEDKNFAQSY---FDFSKPGIKRATIKGQIQLLQPPATSPLLQGSKEDSVPPGKEKE 365
+DK + Y +D S+P + ++ ++Q+ P E P KEK+
Sbjct: 494 KKKAQDKILSNEYEEKYDLSRP--TASQLEDELQVGNVPLKKAKESKKHEKLEKPEKEKK 551
Query: 366 NPL 368
+
Sbjct: 552 KKM 554
>gi|169172081 PREDICTED: hypothetical protein [Homo sapiens]
Length = 205
Score = 34.7 bits (78), Expect = 0.15
Identities = 24/99 (24%), Positives = 41/99 (41%), Gaps = 5/99 (5%)
Query: 199 NALCSEEQLQIPDAHSAPPTTSSQAPSPLLSSDLPPPIDLTELITFASSLAMASSSRMDL 258
+AL + + P HS+ + +P+ S L P + S L+ S + +L
Sbjct: 8 SALSTVPATEEPPQHSSKRCPPDRGAAPVSLSALSPTTEEPS----QSQLSALSPTTEEL 63
Query: 259 PSLEHMMKAPPQEALEPSTEPLLTTVEEREPENHAETLP 297
P H + PP PS L+ E P++H++ P
Sbjct: 64 PQ-SHSQRCPPDRGATPSQLSALSPTTEELPQSHSQRCP 101
>gi|169170823 PREDICTED: hypothetical protein [Homo sapiens]
Length = 205
Score = 34.7 bits (78), Expect = 0.15
Identities = 24/99 (24%), Positives = 41/99 (41%), Gaps = 5/99 (5%)
Query: 199 NALCSEEQLQIPDAHSAPPTTSSQAPSPLLSSDLPPPIDLTELITFASSLAMASSSRMDL 258
+AL + + P HS+ + +P+ S L P + S L+ S + +L
Sbjct: 8 SALSTVPATEEPPQHSSKRCPPDRGAAPVSLSALSPTTEEPS----QSQLSALSPTTEEL 63
Query: 259 PSLEHMMKAPPQEALEPSTEPLLTTVEEREPENHAETLP 297
P H + PP PS L+ E P++H++ P
Sbjct: 64 PQ-SHSQRCPPDRGATPSQLSALSPTTEELPQSHSQRCP 101
>gi|47717125 intersectin 1 isoform ITSN-s [Homo sapiens]
Length = 1220
Score = 34.7 bits (78), Expect = 0.15
Identities = 50/247 (20%), Positives = 98/247 (39%), Gaps = 38/247 (15%)
Query: 18 EVAEMRDDLSQHQIQEEQELEADMLEQKPQLQVDLDLDPDPDPDPELEIGQVPALLE--- 74
++ E+R+ ++ Q+Q+++ +EA+ L+QK Q + ++L+ + + LE
Sbjct: 606 QLKELREIHNKQQLQKQKSMEAERLKQKEQERKIIELEKQKEEAQRRAQERDKQWLEHVQ 665
Query: 75 --------SELYPALKLEAELDTEANSNEESDFEEPMQLVCKIESVHSNMGLPTPQTFRP 126
+L+ KL+ E + EE +E + ++ H P Q P
Sbjct: 666 QEDEHQRPRKLHEEEKLKREESVKKKDGEEKGKQEAQDKLGRLFHQHQEPAKPAVQA--P 723
Query: 127 WS-LNSNCRSFTEENHV------------SACHHSISAQTSKHLFWANKLIQASEHSLQR 173
WS + + + +V S H I+ Q + + + S+
Sbjct: 724 WSTAEKGPLTISAQENVKVVYYRALYPFESRSHDEITIQPGDIVMVKGEWVDESQTGEPG 783
Query: 174 AINMQLNNGSAGQPIRSPLREAIPTNALCSEEQLQIPDAHSAPPTTSSQAPSPLLS-SDL 232
+ +L + P + E IP N ++P A P T S+ AP+P L+ +
Sbjct: 784 WLGGELKGKTGWFP--ANYAEKIPEN--------EVP-APVKPVTDSTSAPAPKLALRET 832
Query: 233 PPPIDLT 239
P P+ +T
Sbjct: 833 PAPLAVT 839
>gi|47717123 intersectin 1 isoform ITSN-l [Homo sapiens]
Length = 1721
Score = 34.7 bits (78), Expect = 0.15
Identities = 50/247 (20%), Positives = 98/247 (39%), Gaps = 38/247 (15%)
Query: 18 EVAEMRDDLSQHQIQEEQELEADMLEQKPQLQVDLDLDPDPDPDPELEIGQVPALLE--- 74
++ E+R+ ++ Q+Q+++ +EA+ L+QK Q + ++L+ + + LE
Sbjct: 606 QLKELREIHNKQQLQKQKSMEAERLKQKEQERKIIELEKQKEEAQRRAQERDKQWLEHVQ 665
Query: 75 --------SELYPALKLEAELDTEANSNEESDFEEPMQLVCKIESVHSNMGLPTPQTFRP 126
+L+ KL+ E + EE +E + ++ H P Q P
Sbjct: 666 QEDEHQRPRKLHEEEKLKREESVKKKDGEEKGKQEAQDKLGRLFHQHQEPAKPAVQA--P 723
Query: 127 WS-LNSNCRSFTEENHV------------SACHHSISAQTSKHLFWANKLIQASEHSLQR 173
WS + + + +V S H I+ Q + + + S+
Sbjct: 724 WSTAEKGPLTISAQENVKVVYYRALYPFESRSHDEITIQPGDIVMVKGEWVDESQTGEPG 783
Query: 174 AINMQLNNGSAGQPIRSPLREAIPTNALCSEEQLQIPDAHSAPPTTSSQAPSPLLS-SDL 232
+ +L + P + E IP N ++P A P T S+ AP+P L+ +
Sbjct: 784 WLGGELKGKTGWFP--ANYAEKIPEN--------EVP-APVKPVTDSTSAPAPKLALRET 832
Query: 233 PPPIDLT 239
P P+ +T
Sbjct: 833 PAPLAVT 839
>gi|194294554 SET binding protein 1 isoform a [Homo sapiens]
Length = 1596
Score = 34.7 bits (78), Expect = 0.15
Identities = 37/177 (20%), Positives = 61/177 (34%), Gaps = 19/177 (10%)
Query: 145 CHHSISAQTSKHLFWANKLIQASEHSLQRAINMQLNNGSAGQPIRSPL------REAIPT 198
C+++ T K+L NK+++A Q G+P + P R+ +P
Sbjct: 1415 CNYTKILSTKKNLDHVNKILKAKRLQRQSKTGNNFVKKRRGRPRKQPTQFDEDSRDQMPV 1474
Query: 199 NALCSEEQLQIPDAHSAPPTTSSQAPSPLLSSDLPPPIDLTELITFASSLAMASSSRMDL 258
C + +P P+ S P S D T + T + + MA +
Sbjct: 1475 LEKC----IDLPSKRGQKPSLSPLVLEPAASQD-------TIMATIEAVIHMAREAPPLP 1523
Query: 259 PSLEHMMKAPPQEALEPSTEPLLTTVEEREPENHAETLPEKPREARAPLKSWSQEDK 315
P + PP L P P L H P +P + P + QE++
Sbjct: 1524 PPPPPPLPPPPPPPLPP--PPPLPKTPRGGKRKHKPQAPAQPPQQSPPQQPLPQEEE 1578
>gi|91208437 GEM interacting protein [Homo sapiens]
Length = 970
Score = 34.7 bits (78), Expect = 0.15
Identities = 34/125 (27%), Positives = 47/125 (37%), Gaps = 16/125 (12%)
Query: 208 QIPDAHSAPPTTSSQAPSPLLSSDLPPPIDLTELITFASSLAMASSSRMDLPSLEHMMKA 267
++P A PP SS AP PL +S PPP L + +AS D
Sbjct: 761 ELPQATEPPPQDSSPAPGPLTTSSQPPP---PHLDPDSQPPVLASDPGPD---------- 807
Query: 268 PPQEALEPSTEPLLTTVEEREPE-NHAETLPEKPREARAPLKSWSQEDKNF-AQSYFDFS 325
PQ P T E P+ + E + E ++ + S ED QS FS
Sbjct: 808 -PQHHSTLEQHPTATPTEIPTPQSDQREDVAEDTKDGGGEVSSQGPEDSLLGTQSRGHFS 866
Query: 326 KPGIK 330
+ +K
Sbjct: 867 RQPVK 871
>gi|115298682 HBxAg transactivated protein 2 [Homo sapiens]
Length = 2817
Score = 34.7 bits (78), Expect = 0.15
Identities = 37/157 (23%), Positives = 64/157 (40%), Gaps = 16/157 (10%)
Query: 160 ANKLIQASEHSLQRAINMQLNNGSAGQPIRSPLREAIPTNALCSE-EQLQIPDAHSAPPT 218
A+ + AS + A + ++ A P +P+ ++ T A + IP SA +
Sbjct: 1811 ASASVSASVPASTSAAAITSSSAPASAPAPTPILASVSTPASVTILASASIPILASALAS 1870
Query: 219 TSSQAPSPLLSSDLPPPIDLTELITFASSLAMASSSRMDLPSLEHMMKAPPQEALEPSTE 278
TS+ P+P SS P +IT + A A ++ + L P A P+
Sbjct: 1871 TSAPTPAPAASSPAAP------VITAPTIPASAPTASVPLA---------PASASAPAPA 1915
Query: 279 PLLTTVEEREPENHAETLPEKPREARAPLKSWSQEDK 315
P + P A+T + + + PL++ SQ K
Sbjct: 1916 PTPVSAPNPAPPAPAQTQAQTHKPVQNPLQTTSQSSK 1952
Score = 30.4 bits (67), Expect = 2.8
Identities = 24/100 (24%), Positives = 38/100 (38%), Gaps = 11/100 (11%)
Query: 216 PPTTSSQAPSPLLSSDLPPPID-------LTELITFASSLAMASSSRMDLPSLEHMMKAP 268
PP Q P+P+ +PPPI TE T A + + L + + P
Sbjct: 1060 PPPPPPQPPAPIQPQSVPPPIQPEAEKFPSTETATLAQK--PSQDTEKPLEPVSTVQVEP 1117
Query: 269 PQEALEPSTEPLLTTVEEREPEN--HAETLPEKPREARAP 306
+ + T EE++PE + + E+PR P
Sbjct: 1118 AVKTVNQQTMAAPVVKEEKQPEKVISKDLVIERPRPDSRP 1157
>gi|91208420 bassoon protein [Homo sapiens]
Length = 3926
Score = 34.3 bits (77), Expect = 0.19
Identities = 36/134 (26%), Positives = 59/134 (44%), Gaps = 12/134 (8%)
Query: 215 APPTTSSQAPSPLLSSDLPPPIDLTELITFASSLAMASSSRMDLPS-LEHMMKAPPQEAL 273
A P ++ +P P +S P+ +E SS+ + +P+ E M K PP+
Sbjct: 572 ASPLSTKASPLPSKASPQAKPLRASEPSKTPSSV---QEKKTRVPTKAEPMPKPPPETTP 628
Query: 274 EPSTEPLLTTVEEREPENH-AETLPEKPREARAP---LKSWSQEDKNFAQSYFD--FSKP 327
P+T + + V EP + +PE P+ A K +SQ+ QS D +S
Sbjct: 629 TPATPKVKSGVRRAEPATPVVKAVPEAPKGGEAEDLVGKPYSQDASRSPQSLSDTGYSSD 688
Query: 328 GI--KRATIKGQIQ 339
GI ++ I G +Q
Sbjct: 689 GISSSQSEITGVVQ 702
>gi|16418457 solute carrier family 26, member 8 isoform a [Homo
sapiens]
Length = 970
Score = 34.3 bits (77), Expect = 0.19
Identities = 20/67 (29%), Positives = 37/67 (55%), Gaps = 2/67 (2%)
Query: 28 QHQIQEEQELEADMLEQKPQLQVDLDLDPDPDPDPELE-IGQVPALLESELYPALKLEAE 86
Q ++EE EL+ + LE + + + LDLD D + +PE+E + ++E+ P + E E
Sbjct: 851 QQPVEEESELDLE-LESEQEAGLGLDLDLDRELEPEMEPKAETETKTQTEMEPQPETEPE 909
Query: 87 LDTEANS 93
++ S
Sbjct: 910 MEPNPKS 916
>gi|20336285 solute carrier family 26, member 8 isoform b [Homo
sapiens]
Length = 865
Score = 34.3 bits (77), Expect = 0.19
Identities = 20/67 (29%), Positives = 37/67 (55%), Gaps = 2/67 (2%)
Query: 28 QHQIQEEQELEADMLEQKPQLQVDLDLDPDPDPDPELE-IGQVPALLESELYPALKLEAE 86
Q ++EE EL+ + LE + + + LDLD D + +PE+E + ++E+ P + E E
Sbjct: 746 QQPVEEESELDLE-LESEQEAGLGLDLDLDRELEPEMEPKAETETKTQTEMEPQPETEPE 804
Query: 87 LDTEANS 93
++ S
Sbjct: 805 MEPNPKS 811
>gi|14269566 megakaryoblastic leukemia 1 protein [Homo sapiens]
Length = 931
Score = 33.9 bits (76), Expect = 0.25
Identities = 55/239 (23%), Positives = 87/239 (36%), Gaps = 39/239 (16%)
Query: 138 EENHVSACHHSISAQTSKHLFWANKLIQASEHSLQRAINMQLNNGSAGQPIRSPLREAIP 197
+EN S+C S H F + A+ H A+ + Q P E +P
Sbjct: 577 QENSFSSCQLSQQPLGPAHPFNPSLAAPATNHIDPCAVAPGPPSVVVKQEALQPEPEPVP 636
Query: 198 TNALCSEEQLQIPDAHSAPPTTSSQAPSPLLSSDLPPPIDLTELITFASSLAMASSSRMD 257
L Q P AP L++ + LT A S ++S S
Sbjct: 637 APQLLLGPQ--------GPSLIKGVAPPTLITDSTGTHLVLTVTNKNADSPGLSSGSPQQ 688
Query: 258 LPSLEHMMKAPPQEA---LEPSTEPLL---TTVEEREPENHAETLPEKPREARAPLKSWS 311
PS + AP A LE +PL T++ ++EP + E + ++P++
Sbjct: 689 -PSSQPGSPAPAPSAQMDLEHPLQPLFGTPTSLLKKEPPGYEEAMSQQPKQ--------- 738
Query: 312 QEDKNFAQSYFDFSKPGIKRATIKGQIQLLQPPATSPLLQGSKEDSVPPGKEKENPLLV 370
QE+ + +Q D I+ I + +PP+ PGKEK +P V
Sbjct: 739 QENGSSSQQMDDLFDILIQSGEISADFK--EPPSL-------------PGKEKPSPKTV 782
>gi|238859557 regulatory factor X1 [Homo sapiens]
Length = 979
Score = 33.5 bits (75), Expect = 0.33
Identities = 49/217 (22%), Positives = 77/217 (35%), Gaps = 20/217 (9%)
Query: 183 SAGQPIRSPLREAIPTNALCSEEQLQIPDAHSAPPTTSSQ---------APSPLLSSDLP 233
+A QP + P A P +E LQ P + PP Q APS + P
Sbjct: 36 AAPQPPQPPTAAATPQPQYVTE--LQSPQPQAQPPGGQKQYVTELPAVPAPSQPTGAPTP 93
Query: 234 PPIDLTELITFASSLAMASS---SRMDLPSLEHMMKAPPQ--EALEPSTEPLLTTVEERE 288
P ++ S AM +S S S P Q + ++ + + LL +
Sbjct: 94 SPAPQQYIVVTVSEGAMRASETVSEASPGSTASQTGVPTQVVQQVQGTQQRLLVQTSVQA 153
Query: 289 PENHAETLPEKPREARAPLKSWSQEDKNFAQSYFDFSKPGIKRATIKGQIQLLQPPATSP 348
H P + + P ++ + + QS SK G T+ G Q+ PP SP
Sbjct: 154 KPGHVS--PLQLTNIQVPQQALPTQ-RLVVQSAAPGSKGGQVSLTVHGTQQVHSPPEQSP 210
Query: 349 LLQGSKEDSVPPGKEKENPLLVKIH-FKLSAPTIPEK 384
+ S P +++H + S P E+
Sbjct: 211 VQANSSSSKTAGAPTGTVPQQLQVHGVQQSVPVTQER 247
>gi|222418647 mucin 7, secreted precursor [Homo sapiens]
Length = 377
Score = 33.5 bits (75), Expect = 0.33
Identities = 27/99 (27%), Positives = 38/99 (38%), Gaps = 6/99 (6%)
Query: 208 QIPDAHSAPPTTSSQAPSPLLSSDLPP----PIDLTELITFASSLAMASSSRMDLPSLEH 263
Q P + SAPP T++ P+P ++ PP P + T S+ A S P
Sbjct: 200 QAPPSSSAPPETTAAPPTPPATTPAPPSSSAPPETTAAPPTPSATTPAPLSSSAPPETTA 259
Query: 264 MMKAPPQEALEPS--TEPLLTTVEEREPENHAETLPEKP 300
+ P L+PS + P TT P P P
Sbjct: 260 VPPTPSATTLDPSSASAPPETTAAPPTPSATTPAPPSSP 298
Score = 31.6 bits (70), Expect = 1.3
Identities = 20/74 (27%), Positives = 28/74 (37%)
Query: 210 PDAHSAPPTTSSQAPSPLLSSDLPPPIDLTELITFASSLAMASSSRMDLPSLEHMMKAPP 269
P + SAPP T++ P+P ++ PP + T A SS P AP
Sbjct: 271 PSSASAPPETTAAPPTPSATTPAPPSSPAPQETTAAPITTPNSSPTTLAPDTSETSAAPT 330
Query: 270 QEALEPSTEPLLTT 283
+ T TT
Sbjct: 331 HQTTTSVTTQTTTT 344
Score = 31.2 bits (69), Expect = 1.6
Identities = 29/121 (23%), Positives = 41/121 (33%), Gaps = 7/121 (5%)
Query: 187 PIRSPLREAIPTNALCSEEQLQIPDAHSAPPTTSSQAPSPLLSSDLPPPIDLTELITFAS 246
P+ SP + P + SAPP T++ P+P ++ PP T A
Sbjct: 156 PVNSPAPQDTTAAPPTPSATTPAPPSSSAPPETTAAPPTPSATTQAPPSSSAPPETTAAP 215
Query: 247 SLAMASSSRMDLPSLEHMMKAPPQEALEPSTEPLLTTVEEREPENHAETLPEKPREARAP 306
A++ S APP+ P T P TT ET P +
Sbjct: 216 PTPPATTPAPPSSS------APPETTAAPPT-PSATTPAPLSSSAPPETTAVPPTPSATT 268
Query: 307 L 307
L
Sbjct: 269 L 269
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.310 0.127 0.366
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 17,760,952
Number of Sequences: 37866
Number of extensions: 941892
Number of successful extensions: 4517
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 206
Number of HSP's that attempted gapping in prelim test: 4099
Number of HSP's gapped (non-prelim): 585
length of query: 384
length of database: 18,247,518
effective HSP length: 104
effective length of query: 280
effective length of database: 14,309,454
effective search space: 4006647120
effective search space used: 4006647120
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.