Guide to the Human Genome
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Name: RG9MTD2 Sequence: fasta or formatted (339aa) NCBI GI: 22748659
Description:

RNA (guanine-9-) methyltransferase domain containing 2

Referenced in:

tRNA Enzymes

Other entries for this name:
alt mRNA [339aa] RNA (guanine-9-) methyltransferase domain containing 2
alt mRNA [339aa] RNA (guanine-9-) methyltransferase domain containing 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             3.2         11           1
 C cysteine            1.5          5           1
 D aspartate           6.8         23           1
 E glutamate          10.3         35           3
 F phenylalanine       2.1          7           2
 G glycine             4.4         15           2
 H histidine           5.0         17           2
 I isoleucine          5.3         18           2
 K lysine             10.9         37           2
 L leucine             8.3         28           1
 M methionine          2.4          8           1
 N asparagine          5.0         17           1
 P proline             3.5         12           1
 Q glutamine           5.9         20           1
 R arginine            6.2         21           2
 S serine              7.7         26           2
 T threonine           2.9         10           1
 V valine              4.7         16           2
 W tryptophan          1.2          4           1
 Y tyrosine            2.7          9           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   RNA (guanine-9-) methyltransferase domain containing... 
RG9MTD2               1.000   RNA (guanine-9-) methyltransferase domain containin...
RG9MTD2               1.000   RNA (guanine-9-) methyltransferase domain containin...
RG9MTD3               0.145   RNA (guanine-9-) methyltransferase domain containin...
RG9MTD1               0.070   RNA (guanine-9-) methyltransferase domain containin...
TNIK                  0.039   TRAF2 and NCK interacting kinase isoform 6 
TNIK                  0.039   TRAF2 and NCK interacting kinase isoform 5 
LOC100294364          0.027   PREDICTED: hypothetical protein 
TNIK                  0.025   TRAF2 and NCK interacting kinase isoform 8 
TNIK                  0.025   TRAF2 and NCK interacting kinase isoform 7 
LOC100294088          0.024   PREDICTED: hypothetical protein, partial 
TNIK                  0.024   TRAF2 and NCK interacting kinase isoform 2 
TNIK                  0.024   TRAF2 and NCK interacting kinase isoform 1 
LOC100133599          0.021   PREDICTED: hypothetical protein 
TCHH                  0.021   trichohyalin 
ZC3H6                 0.021   zinc finger CCCH-type domain containing 6 
BAT2D1                0.021   HBxAg transactivated protein 2 
UACA                  0.019   uveal autoantigen with coiled-coil domains and ankyr...
UACA                  0.019   uveal autoantigen with coiled-coil domains and ankyr...
CHAF1A                0.018   chromatin assembly factor 1, subunit A (p150) 
PASD1                 0.018   PAS domain containing 1 
ESF1                  0.018   ABT1-associated protein 
ITSN1                 0.018   intersectin 1 isoform ITSN-s 
ITSN1                 0.018   intersectin 1 isoform ITSN-l 
CROP                  0.018   cisplatin resistance-associated overexpressed protei...
CROP                  0.018   cisplatin resistance-associated overexpressed protei...
DDX55                 0.018   DEAD (Asp-Glu-Ala-Asp) box polypeptide 55 
LOC100133599          0.016   PREDICTED: hypothetical protein 
MAP1B                 0.016   microtubule-associated protein 1B 
MAP4K4                0.016   mitogen-activated protein kinase kinase kinase kinas...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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