Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 148886760
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|148886760 nanos homolog 3 [Homo sapiens]
(192 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|148886760 nanos homolog 3 [Homo sapiens] 404 e-113
gi|71143121 nanos homolog 2 [Homo sapiens] 119 1e-27
gi|40804761 nanos homolog 1 [Homo sapiens] 79 3e-15
gi|156416026 zinc finger protein 219 [Homo sapiens] 45 5e-05
gi|156415998 zinc finger protein 219 [Homo sapiens] 45 5e-05
gi|156415996 zinc finger protein 219 [Homo sapiens] 45 5e-05
gi|31563386 sulfotransferase family, cytosolic, 2B, member 1 iso... 43 2e-04
gi|31563388 sulfotransferase family, cytosolic, 2B, member 1 iso... 43 2e-04
gi|113204617 skeletal muscle ryanodine receptor isoform 2 [Homo ... 42 2e-04
gi|113204615 skeletal muscle ryanodine receptor isoform 1 [Homo ... 42 2e-04
gi|5730045 solute carrier family 16, member 2 [Homo sapiens] 42 4e-04
gi|47551356 hypothetical protein LOC408029 [Homo sapiens] 42 4e-04
gi|62000702 diacylglycerol kinase kappa [Homo sapiens] 39 0.003
gi|46358366 zinc finger protein 746 [Homo sapiens] 39 0.003
gi|68563515 keratinocyte proline-rich protein [Homo sapiens] 38 0.005
gi|24307909 ral guanine nucleotide dissociation stimulator isofo... 38 0.006
gi|108796058 ral guanine nucleotide dissociation stimulator isof... 38 0.006
gi|110556644 zinc finger protein, multitype 1 [Homo sapiens] 38 0.006
gi|83977459 pleckstrin homology-like domain, family A, member 1 ... 37 0.010
gi|72004269 tetra-peptide repeat homeobox [Homo sapiens] 37 0.010
gi|4505419 nucleolar protein 3 [Homo sapiens] 37 0.013
gi|61966919 hypothetical protein LOC442444 [Homo sapiens] 37 0.013
gi|5031703 Ras-GTPase-activating protein SH3-domain-binding prot... 37 0.013
gi|38327552 Ras-GTPase-activating protein SH3-domain-binding pro... 37 0.013
gi|40255016 membrane-associated RING-CH protein IX [Homo sapiens] 36 0.018
gi|14327896 cyclin B1 [Homo sapiens] 36 0.023
gi|20986497 mitogen-activated protein kinase 7 isoform 1 [Homo s... 36 0.023
gi|209529736 mitogen-activated protein kinase 7 isoform 1 [Homo ... 36 0.023
gi|209529734 mitogen-activated protein kinase 7 isoform 1 [Homo ... 36 0.023
gi|20986499 mitogen-activated protein kinase 7 isoform 2 [Homo s... 36 0.023
>gi|148886760 nanos homolog 3 [Homo sapiens]
Length = 192
Score = 404 bits (1039), Expect = e-113
Identities = 192/192 (100%), Positives = 192/192 (100%)
Query: 1 MGTFDLWTDYLGLAHLVRALSGKEGPETRLSPQPEPEPMLEPVSALEPMPAPESVPVPGP 60
MGTFDLWTDYLGLAHLVRALSGKEGPETRLSPQPEPEPMLEPVSALEPMPAPESVPVPGP
Sbjct: 1 MGTFDLWTDYLGLAHLVRALSGKEGPETRLSPQPEPEPMLEPVSALEPMPAPESVPVPGP 60
Query: 61 KDQKRSLESSPAPERLCSFCKHNGESRAIYQSHVLKDEAGRVLCPILRDYVCPQCGATRE 120
KDQKRSLESSPAPERLCSFCKHNGESRAIYQSHVLKDEAGRVLCPILRDYVCPQCGATRE
Sbjct: 61 KDQKRSLESSPAPERLCSFCKHNGESRAIYQSHVLKDEAGRVLCPILRDYVCPQCGATRE 120
Query: 121 RAHTRRFCPLTGQGYTSVYSHTTRNSAGKKLVRPDKAKTQDTGHRRGGGGGAGFRGAGKS 180
RAHTRRFCPLTGQGYTSVYSHTTRNSAGKKLVRPDKAKTQDTGHRRGGGGGAGFRGAGKS
Sbjct: 121 RAHTRRFCPLTGQGYTSVYSHTTRNSAGKKLVRPDKAKTQDTGHRRGGGGGAGFRGAGKS 180
Query: 181 EPSPSCSPSMST 192
EPSPSCSPSMST
Sbjct: 181 EPSPSCSPSMST 192
>gi|71143121 nanos homolog 2 [Homo sapiens]
Length = 138
Score = 119 bits (299), Expect = 1e-27
Identities = 65/152 (42%), Positives = 87/152 (57%), Gaps = 21/152 (13%)
Query: 4 FDLWTDYLGLAHLVRALSGKEGP--ETRLSPQPEPEPMLEPVSALEPMPAPESVPVPGPK 61
FD+W DY L+ +V AL G ET+ +P P P P+ + + PG
Sbjct: 6 FDMWKDYFNLSQVVWALIASRGQRLETQEIEEPSPGP---------PLGQDQGLGAPG-- 54
Query: 62 DQKRSLESSPAPERLCSFCKHNGESRAIYQSHVLKDEAGRVLCPILRDYVCPQCGATRER 121
++ LC+FCKHNGESR +Y SH LK G V+CPILR YVCP CGAT ++
Sbjct: 55 -------ANGGLGTLCNFCKHNGESRHVYSSHQLKTPDGVVVCPILRHYVCPVCGATGDQ 107
Query: 122 AHTRRFCPLTGQGYTSVYSHTTRNSAGKKLVR 153
AHT ++CPL G G S+Y + RNSAG+++ R
Sbjct: 108 AHTLKYCPLNG-GQQSLYRRSGRNSAGRRVKR 138
>gi|40804761 nanos homolog 1 [Homo sapiens]
Length = 292
Score = 78.6 bits (192), Expect = 3e-15
Identities = 37/91 (40%), Positives = 55/91 (60%), Gaps = 6/91 (6%)
Query: 47 EPMPAPESVPVPGPKDQKRSLESSPA-----PE-RLCSFCKHNGESRAIYQSHVLKDEAG 100
E P E P + + + + A PE ++C FC++N E+ A+Y +H+LK G
Sbjct: 178 EATPREERAPAWAAEPRLHAASGAAAARLLKPELQVCVFCRNNKEAMALYTTHILKGPDG 237
Query: 101 RVLCPILRDYVCPQCGATRERAHTRRFCPLT 131
RVLCP+LR Y CP CGA+ + AHT ++CPL+
Sbjct: 238 RVLCPVLRRYTCPLCGASGDNAHTIKYCPLS 268
>gi|156416026 zinc finger protein 219 [Homo sapiens]
Length = 722
Score = 44.7 bits (104), Expect = 5e-05
Identities = 38/145 (26%), Positives = 52/145 (35%), Gaps = 31/145 (21%)
Query: 13 LAHLVRALSGKEGPETRLSPQPEPEPMLEPVSALEPMPAPESVPVPGPK-DQKRSLESSP 71
L H + A E P S P P+P +P P P P SVP P P+ + +R +P
Sbjct: 205 LHHSLTAHGAPERPLAATSAAPPPQPQPQP----PPQPEPRSVPQPEPEPEPEREATPTP 260
Query: 72 A----------PERLCSFCKHNGESRAIYQSHVLKDEAGRVLCPILRDYVCPQCG----- 116
A PE C C + + H+ K +A D+ CP CG
Sbjct: 261 APAAPEEPPAPPEFRCQVCGQSFTQSWFLKGHMRKHKAS-------FDHACPVCGRCFKE 313
Query: 117 ----ATRERAHTRRFCPLTGQGYTS 137
+ H + PL G S
Sbjct: 314 PWFLKNHMKVHASKLGPLRAPGPAS 338
>gi|156415998 zinc finger protein 219 [Homo sapiens]
Length = 722
Score = 44.7 bits (104), Expect = 5e-05
Identities = 38/145 (26%), Positives = 52/145 (35%), Gaps = 31/145 (21%)
Query: 13 LAHLVRALSGKEGPETRLSPQPEPEPMLEPVSALEPMPAPESVPVPGPK-DQKRSLESSP 71
L H + A E P S P P+P +P P P P SVP P P+ + +R +P
Sbjct: 205 LHHSLTAHGAPERPLAATSAAPPPQPQPQP----PPQPEPRSVPQPEPEPEPEREATPTP 260
Query: 72 A----------PERLCSFCKHNGESRAIYQSHVLKDEAGRVLCPILRDYVCPQCG----- 116
A PE C C + + H+ K +A D+ CP CG
Sbjct: 261 APAAPEEPPAPPEFRCQVCGQSFTQSWFLKGHMRKHKAS-------FDHACPVCGRCFKE 313
Query: 117 ----ATRERAHTRRFCPLTGQGYTS 137
+ H + PL G S
Sbjct: 314 PWFLKNHMKVHASKLGPLRAPGPAS 338
>gi|156415996 zinc finger protein 219 [Homo sapiens]
Length = 722
Score = 44.7 bits (104), Expect = 5e-05
Identities = 38/145 (26%), Positives = 52/145 (35%), Gaps = 31/145 (21%)
Query: 13 LAHLVRALSGKEGPETRLSPQPEPEPMLEPVSALEPMPAPESVPVPGPK-DQKRSLESSP 71
L H + A E P S P P+P +P P P P SVP P P+ + +R +P
Sbjct: 205 LHHSLTAHGAPERPLAATSAAPPPQPQPQP----PPQPEPRSVPQPEPEPEPEREATPTP 260
Query: 72 A----------PERLCSFCKHNGESRAIYQSHVLKDEAGRVLCPILRDYVCPQCG----- 116
A PE C C + + H+ K +A D+ CP CG
Sbjct: 261 APAAPEEPPAPPEFRCQVCGQSFTQSWFLKGHMRKHKAS-------FDHACPVCGRCFKE 313
Query: 117 ----ATRERAHTRRFCPLTGQGYTS 137
+ H + PL G S
Sbjct: 314 PWFLKNHMKVHASKLGPLRAPGPAS 338
>gi|31563386 sulfotransferase family, cytosolic, 2B, member 1
isoform b [Homo sapiens]
Length = 365
Score = 42.7 bits (99), Expect = 2e-04
Identities = 19/47 (40%), Positives = 26/47 (55%)
Query: 26 PETRLSPQPEPEPMLEPVSALEPMPAPESVPVPGPKDQKRSLESSPA 72
P+ SP+PEP+P LEP ++LE P P S P P P + P+
Sbjct: 319 PDPEPSPEPEPKPSLEPNTSLEREPRPNSSPSPSPGQASETPHPRPS 365
>gi|31563388 sulfotransferase family, cytosolic, 2B, member 1
isoform a [Homo sapiens]
Length = 350
Score = 42.7 bits (99), Expect = 2e-04
Identities = 19/47 (40%), Positives = 26/47 (55%)
Query: 26 PETRLSPQPEPEPMLEPVSALEPMPAPESVPVPGPKDQKRSLESSPA 72
P+ SP+PEP+P LEP ++LE P P S P P P + P+
Sbjct: 304 PDPEPSPEPEPKPSLEPNTSLEREPRPNSSPSPSPGQASETPHPRPS 350
>gi|113204617 skeletal muscle ryanodine receptor isoform 2 [Homo
sapiens]
Length = 5033
Score = 42.4 bits (98), Expect = 2e-04
Identities = 23/56 (41%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
Query: 22 GKEGPETRL--SPQPEPEPMLEPVSALEPMPAPESVPVPGPKDQKRSLESSPAPER 75
G +G E L P+PEPEP LEP A E VP P P+ K+ SP P++
Sbjct: 4474 GVDGVEEELPPEPEPEPEPELEPEKADAENGEKEEVPEPTPEPPKKQAPPSPPPKK 4529
>gi|113204615 skeletal muscle ryanodine receptor isoform 1 [Homo
sapiens]
Length = 5038
Score = 42.4 bits (98), Expect = 2e-04
Identities = 23/56 (41%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
Query: 22 GKEGPETRL--SPQPEPEPMLEPVSALEPMPAPESVPVPGPKDQKRSLESSPAPER 75
G +G E L P+PEPEP LEP A E VP P P+ K+ SP P++
Sbjct: 4479 GVDGVEEELPPEPEPEPEPELEPEKADAENGEKEEVPEPTPEPPKKQAPPSPPPKK 4534
>gi|5730045 solute carrier family 16, member 2 [Homo sapiens]
Length = 613
Score = 41.6 bits (96), Expect = 4e-04
Identities = 21/53 (39%), Positives = 26/53 (49%), Gaps = 5/53 (9%)
Query: 26 PETRLSPQPEPEPMLEPVSALEPMPAPESVPVPGPK-----DQKRSLESSPAP 73
PE P+PEPEP PV EP P P+ +P P P + +R E P P
Sbjct: 103 PEPESEPEPEPEPEPVPVPPPEPQPEPQPLPDPAPLPELEFESERVHEPEPTP 155
Score = 36.6 bits (83), Expect = 0.013
Identities = 21/52 (40%), Positives = 26/52 (50%), Gaps = 7/52 (13%)
Query: 23 KEGPETRLSPQPEPEPMLEPVSALEPMPAPESVPVPGPKDQKRSLESSPAPE 74
+E + + P PEP EP EP P PE VPVP P+ Q E P P+
Sbjct: 90 QEADQEQQEPVGSPEPESEP----EPEPEPEPVPVPPPEPQP---EPQPLPD 134
>gi|47551356 hypothetical protein LOC408029 [Homo sapiens]
Length = 209
Score = 41.6 bits (96), Expect = 4e-04
Identities = 27/61 (44%), Positives = 34/61 (55%), Gaps = 6/61 (9%)
Query: 17 VRALSGKEGPETRLSPQPEPEPMLEPVSALEPMPAPESVPVPGPKDQKRSLESSPAPERL 76
VR SG++GPET L+P E PV A+EP+PAP + PG +LE APE
Sbjct: 3 VRPESGEQGPET-LAPASGAEIQRFPVPAVEPVPAPGADSPPG-----TALELEEAPEPS 56
Query: 77 C 77
C
Sbjct: 57 C 57
>gi|62000702 diacylglycerol kinase kappa [Homo sapiens]
Length = 1271
Score = 38.9 bits (89), Expect = 0.003
Identities = 21/52 (40%), Positives = 25/52 (48%), Gaps = 3/52 (5%)
Query: 26 PETRLSPQPEPEPMLEPVSALEPMPAPESVPVPGPK---DQKRSLESSPAPE 74
P T +P+P PEP E P PA ESVP P P+ + L P PE
Sbjct: 105 PATEPAPEPAPEPATESAPEPTPEPALESVPEPAPELTPEVAPELAPEPTPE 156
Score = 37.7 bits (86), Expect = 0.006
Identities = 20/49 (40%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
Query: 26 PETRLSPQPEPEPMLEPVSALEPMPAPESVPVPGPKDQKRSLESSPAPE 74
P + +P PEP EP P PA ES P P P+ S+ PAPE
Sbjct: 93 PAPEPATEPAPEPATEPAPEPAPEPATESAPEPTPEPALESV-PEPAPE 140
Score = 37.0 bits (84), Expect = 0.010
Identities = 21/52 (40%), Positives = 26/52 (50%), Gaps = 7/52 (13%)
Query: 28 TRLSPQPEPEPMLEPVS------ALEPMPAPESVPVPGPKDQKRSLESSPAP 73
T L +P PEP EP S A EP P P + P P P + + ES+P P
Sbjct: 75 TELYTEPTPEPATEPASEPAPEPATEPAPEPATEPAPEPAPEP-ATESAPEP 125
Score = 36.2 bits (82), Expect = 0.018
Identities = 22/61 (36%), Positives = 32/61 (52%), Gaps = 9/61 (14%)
Query: 20 LSGKEGPETRLSPQPEPEPMLEPVSALEPMPAPESVPVPGP-------KDQKRSLESSPA 72
L+ + PE L+P+P PEP+ E P APE P P P ++R L++SP+
Sbjct: 141 LTPEVAPE--LAPEPTPEPVTELAPEFCPEAAPEFRPSPAPCLLQCPVDTRERGLKTSPS 198
Query: 73 P 73
P
Sbjct: 199 P 199
Score = 30.8 bits (68), Expect = 0.74
Identities = 21/53 (39%), Positives = 23/53 (43%), Gaps = 5/53 (9%)
Query: 26 PETRLSPQPEPEPMLEPVSA--LEPMPAPESVPVPGPK---DQKRSLESSPAP 73
PE L PEP P L P A L P P PE V P+ + SPAP
Sbjct: 127 PEPALESVPEPAPELTPEVAPELAPEPTPEPVTELAPEFCPEAAPEFRPSPAP 179
Score = 30.4 bits (67), Expect = 0.97
Identities = 20/59 (33%), Positives = 24/59 (40%), Gaps = 13/59 (22%)
Query: 26 PETRLSPQPEPEPMLEPVSALEPMPAPESV----------PVPGPKDQKRSLESSPAPE 74
P L + PEP+ EP L P P PE+ P P P + S PAPE
Sbjct: 41 PAPPLLSEASPEPIPEPCPELAPGPCPEATSESATELYTEPTPEPATEP---ASEPAPE 96
Score = 28.5 bits (62), Expect = 3.7
Identities = 16/48 (33%), Positives = 21/48 (43%), Gaps = 5/48 (10%)
Query: 32 PQPEPEPMLEPVSALEPMPAPESVPVPGP-----KDQKRSLESSPAPE 74
P P P P L ++ EP+P P PGP + L + P PE
Sbjct: 37 PAPPPAPPLLSEASPEPIPEPCPELAPGPCPEATSESATELYTEPTPE 84
Score = 27.3 bits (59), Expect = 8.2
Identities = 15/43 (34%), Positives = 18/43 (41%), Gaps = 5/43 (11%)
Query: 32 PQPEPEPMLEPVSALEPMPAPESVPVPGPKDQKRSLESSPAPE 74
P P P P P L +PE +P P P+ L P PE
Sbjct: 31 PPPPPPPAPPPAPPLLSEASPEPIPEPCPE-----LAPGPCPE 68
>gi|46358366 zinc finger protein 746 [Homo sapiens]
Length = 644
Score = 38.9 bits (89), Expect = 0.003
Identities = 36/140 (25%), Positives = 51/140 (36%), Gaps = 21/140 (15%)
Query: 41 EPVSALEPMPAPESVPVPGPKDQKRSLESSPAPERLCSFCKHNGESRAIYQSHVLKDEAG 100
+P L P PE +P P + + L+ S AP CK+ G ++ LK
Sbjct: 386 KPPVGLNPRTGPEGLPYSSPDNGEAILDPSQAPRPFNEPCKYPGRTKGFGHKPGLKKHPA 445
Query: 101 RVLCPILRDYVCPQCGATRERAHTRRFCPLTGQGYTSVYSHTTRNSAGKKLVRPDKAKTQ 160
P R + C CG + Q S+ +H + S G PD +
Sbjct: 446 AP--PGGRPFTCATCGK-------------SFQLQVSLSAH--QRSCG----APDGSGPG 484
Query: 161 DTGHRRGGGGGAGFRGAGKS 180
G G GGG G G G +
Sbjct: 485 TGGGGSGSGGGGGGSGGGSA 504
>gi|68563515 keratinocyte proline-rich protein [Homo sapiens]
Length = 579
Score = 38.1 bits (87), Expect = 0.005
Identities = 18/43 (41%), Positives = 23/43 (53%), Gaps = 3/43 (6%)
Query: 34 PEPEPMLEPVSALEPMPAPESVPVPGP---KDQKRSLESSPAP 73
PEP P L+P EP P PE +P+P P + R SP+P
Sbjct: 458 PEPRPCLQPCEHPEPCPRPEPIPLPAPCPSPEPCRETWRSPSP 500
Score = 30.4 bits (67), Expect = 0.97
Identities = 22/65 (33%), Positives = 27/65 (41%), Gaps = 15/65 (23%)
Query: 26 PETRLSPQPEP------EPML--EPVSALEPMPAPESVPVPGPKDQKRSLESSPAPERLC 77
P L P+P P EP L EP+ AL P P P +P PG + P P
Sbjct: 412 PCISLEPRPRPLPRQLSEPCLYPEPLPALRPTPRPVPLPRPGQCE-------IPEPRPCL 464
Query: 78 SFCKH 82
C+H
Sbjct: 465 QPCEH 469
>gi|24307909 ral guanine nucleotide dissociation stimulator isoform
1 [Homo sapiens]
Length = 914
Score = 37.7 bits (86), Expect = 0.006
Identities = 22/49 (44%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
Query: 26 PETRLSPQPEPEPMLEPVSALEPMPAPESVPVPGPKDQKRS-LESSPAP 73
P L P PE E L P A P+PAP P P P S LE +PAP
Sbjct: 263 PVPALKPTPELELALTPARAPSPVPAPAPEPEPAPTPAPGSELEVAPAP 311
Score = 36.6 bits (83), Expect = 0.013
Identities = 24/59 (40%), Positives = 27/59 (45%), Gaps = 7/59 (11%)
Query: 19 ALSGKEGPETRLSPQPEPEPMLEPVSALE----PMPAPESVPVPGPKDQKRSLESSPAP 73
AL+ P +P PEPEP P E P PAPE P P LES+PAP
Sbjct: 276 ALTPARAPSPVPAPAPEPEPAPTPAPGSELEVAPAPAPELQQAPEP---AVGLESAPAP 331
Score = 35.0 bits (79), Expect = 0.039
Identities = 23/50 (46%), Positives = 24/50 (48%), Gaps = 5/50 (10%)
Query: 26 PETRLSPQPEPEPMLE--PVSALEPMPAPESVPVPGPKDQKRSLESSPAP 73
P L PEP LE P ALE PAPE P P Q LE +PAP
Sbjct: 311 PAPELQQAPEPAVGLESAPAPALELEPAPEQDPAP---SQTLELEPAPAP 357
Score = 31.6 bits (70), Expect = 0.43
Identities = 20/54 (37%), Positives = 25/54 (46%), Gaps = 5/54 (9%)
Query: 25 GPETRLSPQPEPEPML--EPVSALEPMPAPESVPVPGPKDQ---KRSLESSPAP 73
G E ++P P PE EP LE PAP P P+ ++LE PAP
Sbjct: 302 GSELEVAPAPAPELQQAPEPAVGLESAPAPALELEPAPEQDPAPSQTLELEPAP 355
Score = 28.5 bits (62), Expect = 3.7
Identities = 13/33 (39%), Positives = 14/33 (42%)
Query: 20 LSGKEGPETRLSPQPEPEPMLEPVSALEPMPAP 52
L P L P PE +P LEP PAP
Sbjct: 325 LESAPAPALELEPAPEQDPAPSQTLELEPAPAP 357
>gi|108796058 ral guanine nucleotide dissociation stimulator isoform
2 [Homo sapiens]
Length = 859
Score = 37.7 bits (86), Expect = 0.006
Identities = 22/49 (44%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
Query: 26 PETRLSPQPEPEPMLEPVSALEPMPAPESVPVPGPKDQKRS-LESSPAP 73
P L P PE E L P A P+PAP P P P S LE +PAP
Sbjct: 208 PVPALKPTPELELALTPARAPSPVPAPAPEPEPAPTPAPGSELEVAPAP 256
Score = 36.6 bits (83), Expect = 0.013
Identities = 24/59 (40%), Positives = 27/59 (45%), Gaps = 7/59 (11%)
Query: 19 ALSGKEGPETRLSPQPEPEPMLEPVSALE----PMPAPESVPVPGPKDQKRSLESSPAP 73
AL+ P +P PEPEP P E P PAPE P P LES+PAP
Sbjct: 221 ALTPARAPSPVPAPAPEPEPAPTPAPGSELEVAPAPAPELQQAPEP---AVGLESAPAP 276
Score = 35.0 bits (79), Expect = 0.039
Identities = 23/50 (46%), Positives = 24/50 (48%), Gaps = 5/50 (10%)
Query: 26 PETRLSPQPEPEPMLE--PVSALEPMPAPESVPVPGPKDQKRSLESSPAP 73
P L PEP LE P ALE PAPE P P Q LE +PAP
Sbjct: 256 PAPELQQAPEPAVGLESAPAPALELEPAPEQDPAP---SQTLELEPAPAP 302
Score = 31.6 bits (70), Expect = 0.43
Identities = 20/54 (37%), Positives = 25/54 (46%), Gaps = 5/54 (9%)
Query: 25 GPETRLSPQPEPEPML--EPVSALEPMPAPESVPVPGPKDQ---KRSLESSPAP 73
G E ++P P PE EP LE PAP P P+ ++LE PAP
Sbjct: 247 GSELEVAPAPAPELQQAPEPAVGLESAPAPALELEPAPEQDPAPSQTLELEPAP 300
Score = 28.5 bits (62), Expect = 3.7
Identities = 13/33 (39%), Positives = 14/33 (42%)
Query: 20 LSGKEGPETRLSPQPEPEPMLEPVSALEPMPAP 52
L P L P PE +P LEP PAP
Sbjct: 270 LESAPAPALELEPAPEQDPAPSQTLELEPAPAP 302
>gi|110556644 zinc finger protein, multitype 1 [Homo sapiens]
Length = 1006
Score = 37.7 bits (86), Expect = 0.006
Identities = 23/80 (28%), Positives = 34/80 (42%), Gaps = 8/80 (10%)
Query: 22 GKEGPETRLSPQPE---PEPMLEPVSALEPMPAPESVPVPGPKDQKRSLESSPAP----- 73
G GP L P+P+ P P P +A E +P P + P K + + +PAP
Sbjct: 913 GSRGPRDGLGPEPQEPPPGPPPSPAAAPEAVPPPPAPPSYSDKGVQTPSKGTPAPLPNGN 972
Query: 74 ERLCSFCKHNGESRAIYQSH 93
R C C S + + +H
Sbjct: 973 HRYCRLCNIKFSSLSTFIAH 992
>gi|83977459 pleckstrin homology-like domain, family A, member 1
[Homo sapiens]
Length = 401
Score = 37.0 bits (84), Expect = 0.010
Identities = 16/51 (31%), Positives = 26/51 (50%)
Query: 23 KEGPETRLSPQPEPEPMLEPVSALEPMPAPESVPVPGPKDQKRSLESSPAP 73
++ P ++ PQP+ +P +P +P P + P P PK Q + L P P
Sbjct: 304 QQQPPSQPQPQPQLQPQPQPQPQPQPQPQSQPQPQPQPKPQPQQLHPYPHP 354
Score = 32.0 bits (71), Expect = 0.33
Identities = 15/44 (34%), Positives = 25/44 (56%), Gaps = 5/44 (11%)
Query: 33 QPEPEPMLEPVSALEPMPAPESVPVPGPKDQKRSLESSPAPERL 76
QP+P+P L+P +P P P+ P P + Q + + P P++L
Sbjct: 310 QPQPQPQLQP----QPQPQPQPQPQPQSQPQPQP-QPKPQPQQL 348
Score = 27.7 bits (60), Expect = 6.3
Identities = 13/35 (37%), Positives = 14/35 (40%)
Query: 32 PQPEPEPMLEPVSALEPMPAPESVPVPGPKDQKRS 66
P P P P P S P P P +P P Q S
Sbjct: 352 PHPHPHPHSHPHSHPHPHPHPHPHQIPHPHPQPHS 386
>gi|72004269 tetra-peptide repeat homeobox [Homo sapiens]
Length = 411
Score = 37.0 bits (84), Expect = 0.010
Identities = 21/50 (42%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
Query: 12 GLAHLVRALSGK-EGPETRLSPQPEPEPMLEPVSALEPMPAPESVPVPGP 60
G A + +SG GP P P P P+ P+S P+P P SVP+PGP
Sbjct: 159 GPAPIPGPISGPFSGPNPGPIPGPNPGPIPGPISG--PIPGPISVPIPGP 206
Score = 33.1 bits (74), Expect = 0.15
Identities = 14/35 (40%), Positives = 19/35 (54%)
Query: 25 GPETRLSPQPEPEPMLEPVSALEPMPAPESVPVPG 59
GP L P P P P+ P + P+P+P +P PG
Sbjct: 245 GPNPGLIPGPIPGPISGPGPIIGPIPSPAQIPGPG 279
Score = 30.4 bits (67), Expect = 0.97
Identities = 16/42 (38%), Positives = 20/42 (47%), Gaps = 7/42 (16%)
Query: 32 PQPEPEPMLEPVSALEPMPAPESVPVPGPKDQKRSLESSPAP 73
P P P P+ P+S +P P P+PGP S PAP
Sbjct: 128 PSPIPAPIPGPISGPVQIPGPFRGPIPGP-------ISGPAP 162
Score = 30.0 bits (66), Expect = 1.3
Identities = 17/40 (42%), Positives = 21/40 (52%), Gaps = 2/40 (5%)
Query: 23 KEGPETRLSPQPEPEPMLEPVSALEPMPAPESV--PVPGP 60
++G LSP P P P P A P P P S+ P+PGP
Sbjct: 85 QKGIPAALSPGPGPIPAPIPGPAQIPGPLPGSIPGPIPGP 124
Score = 29.3 bits (64), Expect = 2.2
Identities = 15/36 (41%), Positives = 19/36 (52%), Gaps = 2/36 (5%)
Query: 25 GPETRLSPQPEPEPMLEPVSALEPMPAPESVPVPGP 60
GP + P P P P+ P+S P P P P+PGP
Sbjct: 197 GPISVPIPGPIPGPISGPISGPNPGPIPG--PIPGP 230
Score = 28.5 bits (62), Expect = 3.7
Identities = 13/36 (36%), Positives = 18/36 (50%)
Query: 25 GPETRLSPQPEPEPMLEPVSALEPMPAPESVPVPGP 60
GP + +P P P P+ P+S P P P + P P
Sbjct: 213 GPISGPNPGPIPGPIPGPISGPNPGPIPGPISGPNP 248
Score = 28.5 bits (62), Expect = 3.7
Identities = 14/36 (38%), Positives = 18/36 (50%)
Query: 25 GPETRLSPQPEPEPMLEPVSALEPMPAPESVPVPGP 60
GP + +P P P P+ P L P P P + PGP
Sbjct: 229 GPISGPNPGPIPGPISGPNPGLIPGPIPGPISGPGP 264
>gi|4505419 nucleolar protein 3 [Homo sapiens]
Length = 208
Score = 36.6 bits (83), Expect = 0.013
Identities = 16/30 (53%), Positives = 19/30 (63%)
Query: 32 PQPEPEPMLEPVSALEPMPAPESVPVPGPK 61
P+PEPEP LEP + EP P E P P P+
Sbjct: 167 PEPEPEPELEPEAEAEPEPELEPEPDPEPE 196
Score = 32.0 bits (71), Expect = 0.33
Identities = 18/41 (43%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Query: 17 VRALSGKEG-PETRLSPQPEPEPMLEPVSALEPMPAPESVP 56
+ A + KE PE P+ EPE EP LEP P PE P
Sbjct: 157 LEAEASKEAEPEPEPEPELEPEAEAEPEPELEPEPDPEPEP 197
Score = 29.6 bits (65), Expect = 1.6
Identities = 18/54 (33%), Positives = 23/54 (42%), Gaps = 1/54 (1%)
Query: 22 GKEGPETRLSPQPEPEPMLEPVSALEPMPAPESVPVP-GPKDQKRSLESSPAPE 74
G E ++ +PEPE E EP P PE P + + LE P PE
Sbjct: 141 GSEAVQSGTPEEPEPELEAEASKEAEPEPEPEPELEPEAEAEPEPELEPEPDPE 194
>gi|61966919 hypothetical protein LOC442444 [Homo sapiens]
Length = 1035
Score = 36.6 bits (83), Expect = 0.013
Identities = 41/117 (35%), Positives = 50/117 (42%), Gaps = 15/117 (12%)
Query: 26 PETRLSPQPEPEPMLEPVSALEPMPAPESV----PVPGPKDQKRSLESSPAPERLCSFCK 81
PETR+S P PEP PVS+L P P V P P PK Q SL P PE S +
Sbjct: 191 PETRVSCLP-PEPPKTPVSSLRPEPPETGVSHLRPQP-PKTQVSSLHLEP-PETGVSHLR 247
Query: 82 HNGESRAIYQSHVLKDEAGRVLCPILR------DYVCPQCGATRERAHTRRFCPLTG 132
+ H+ E G V L ++CP+ TR +H R P TG
Sbjct: 248 PEPPKTQVSSLHLEPPETG-VSHLYLEPPGTGVSHLCPEPPKTRV-SHLHREPPETG 302
>gi|5031703 Ras-GTPase-activating protein SH3-domain-binding protein
[Homo sapiens]
Length = 466
Score = 36.6 bits (83), Expect = 0.013
Identities = 20/50 (40%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
Query: 24 EGPETRLSPQPEPEPMLEPVSALEPMPAPESVPVPGPKDQKRSLESSPAP 73
E P P PEPEP EPVS ++ + P+D ++S SSPAP
Sbjct: 188 EEPVAEPEPDPEPEPEQEPVSEIQEEKPEPVLEETAPEDAQKS--SSPAP 235
>gi|38327552 Ras-GTPase-activating protein SH3-domain-binding
protein [Homo sapiens]
Length = 466
Score = 36.6 bits (83), Expect = 0.013
Identities = 20/50 (40%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
Query: 24 EGPETRLSPQPEPEPMLEPVSALEPMPAPESVPVPGPKDQKRSLESSPAP 73
E P P PEPEP EPVS ++ + P+D ++S SSPAP
Sbjct: 188 EEPVAEPEPDPEPEPEQEPVSEIQEEKPEPVLEETAPEDAQKS--SSPAP 235
>gi|40255016 membrane-associated RING-CH protein IX [Homo sapiens]
Length = 346
Score = 36.2 bits (82), Expect = 0.018
Identities = 28/100 (28%), Positives = 41/100 (41%), Gaps = 4/100 (4%)
Query: 9 DYLGLAHLVRALSGKEGPETRLSPQPEPEPMLEPVSALEPMPAPESVPVPGPKDQKRSLE 68
+Y G R L+G + P R P P P P L P AL+ + S+ Q R
Sbjct: 57 EYYGSEPRARGLAGDKEP--RAGPLPPPAPPLPPPGALDALSLSSSLDSGLRTPQCRICF 114
Query: 69 SSPAPERLCSFCKHNGESRAIYQSHVLK--DEAGRVLCPI 106
P L S C+ +G R +Q +++ E G C +
Sbjct: 115 QGPEQGELLSPCRCDGSVRCTHQPCLIRWISERGSWSCEL 154
>gi|14327896 cyclin B1 [Homo sapiens]
Length = 433
Score = 35.8 bits (81), Expect = 0.023
Identities = 23/50 (46%), Positives = 29/50 (58%), Gaps = 8/50 (16%)
Query: 32 PQP-EPEPMLEPVSALEPMPAPESVPVPGP-KDQKRSLE------SSPAP 73
P+P E PML PV EP+P PE P P P K++K S E +SP+P
Sbjct: 80 PKPLEKVPMLVPVPVSEPVPEPEPEPEPEPVKEEKLSPEPILVDTASPSP 129
Score = 34.3 bits (77), Expect = 0.067
Identities = 20/52 (38%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
Query: 26 PETRLSPQPEPEPMLEPVSALEPMPAPESVPVPGPKDQKRSLESSPAPERLC 77
P + P+PEPEP EPV + P P V P + S +PA E LC
Sbjct: 93 PVSEPVPEPEPEPEPEPVKEEKLSPEPILVDTASPSPMETS-GCAPAEEDLC 143
>gi|20986497 mitogen-activated protein kinase 7 isoform 1 [Homo
sapiens]
Length = 816
Score = 35.8 bits (81), Expect = 0.023
Identities = 17/47 (36%), Positives = 21/47 (44%), Gaps = 1/47 (2%)
Query: 31 SPQPEPEPMLEPVSALEPMPAPESVPVPGPKDQKRSLESSPAPERLC 77
+P P P P PV P P P + P GP+ Q S P P+ C
Sbjct: 588 APAPAPTPTPTPVQPTSPPPGPVAQPT-GPQPQSAGSTSGPVPQPAC 633
>gi|209529736 mitogen-activated protein kinase 7 isoform 1 [Homo
sapiens]
Length = 816
Score = 35.8 bits (81), Expect = 0.023
Identities = 17/47 (36%), Positives = 21/47 (44%), Gaps = 1/47 (2%)
Query: 31 SPQPEPEPMLEPVSALEPMPAPESVPVPGPKDQKRSLESSPAPERLC 77
+P P P P PV P P P + P GP+ Q S P P+ C
Sbjct: 588 APAPAPTPTPTPVQPTSPPPGPVAQPT-GPQPQSAGSTSGPVPQPAC 633
>gi|209529734 mitogen-activated protein kinase 7 isoform 1 [Homo
sapiens]
Length = 816
Score = 35.8 bits (81), Expect = 0.023
Identities = 17/47 (36%), Positives = 21/47 (44%), Gaps = 1/47 (2%)
Query: 31 SPQPEPEPMLEPVSALEPMPAPESVPVPGPKDQKRSLESSPAPERLC 77
+P P P P PV P P P + P GP+ Q S P P+ C
Sbjct: 588 APAPAPTPTPTPVQPTSPPPGPVAQPT-GPQPQSAGSTSGPVPQPAC 633
>gi|20986499 mitogen-activated protein kinase 7 isoform 2 [Homo
sapiens]
Length = 677
Score = 35.8 bits (81), Expect = 0.023
Identities = 17/47 (36%), Positives = 21/47 (44%), Gaps = 1/47 (2%)
Query: 31 SPQPEPEPMLEPVSALEPMPAPESVPVPGPKDQKRSLESSPAPERLC 77
+P P P P PV P P P + P GP+ Q S P P+ C
Sbjct: 449 APAPAPTPTPTPVQPTSPPPGPVAQPT-GPQPQSAGSTSGPVPQPAC 494
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.314 0.133 0.414
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,224,382
Number of Sequences: 37866
Number of extensions: 639485
Number of successful extensions: 7177
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 211
Number of HSP's successfully gapped in prelim test: 269
Number of HSP's that attempted gapping in prelim test: 5219
Number of HSP's gapped (non-prelim): 1787
length of query: 192
length of database: 18,247,518
effective HSP length: 97
effective length of query: 95
effective length of database: 14,574,516
effective search space: 1384579020
effective search space used: 1384579020
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.