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Search of human proteins with 148806891
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|148806891 hypothetical protein LOC54906 [Homo sapiens]
(2430 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|148806891 hypothetical protein LOC54906 [Homo sapiens] 4839 0.0
gi|163838631 retinoblastoma-associated protein 140 isoform a [Ho... 182 5e-45
gi|163838629 retinoblastoma-associated protein 140 isoform b [Ho... 182 5e-45
gi|83367077 mucin 16 [Homo sapiens] 45 9e-04
gi|32483416 neurofilament, heavy polypeptide 200kDa [Homo sapiens] 45 9e-04
gi|56550039 myeloid/lymphoid or mixed-lineage leukemia protein [... 44 0.001
gi|197276600 microtubule-associated protein 4 isoform 4 [Homo sa... 42 0.010
gi|47519639 microtubule-associated protein 4 isoform 1 [Homo sap... 42 0.010
gi|122937492 SET domain containing 5 [Homo sapiens] 41 0.016
gi|247301334 non-protein coding RNA 153 isoform 3 [Homo sapiens] 40 0.028
gi|247301318 non-protein coding RNA 153 isoform 2 [Homo sapiens] 40 0.028
gi|118150654 non-protein coding RNA 153 isoform 1 [Homo sapiens] 40 0.028
gi|149363685 hypothetical protein LOC23379 [Homo sapiens] 39 0.048
gi|239740955 PREDICTED: similar to c114 SLIT-like testicular pro... 39 0.048
gi|239740953 PREDICTED: similar to c114 SLIT-like testicular pro... 39 0.048
gi|210032580 SET domain containing 1B [Homo sapiens] 39 0.048
gi|104526627 triadin [Homo sapiens] 39 0.048
gi|116325993 c114 SLIT-like testicular protein [Homo sapiens] 39 0.062
gi|110665701 leucine rich repeat containing 37A [Homo sapiens] 39 0.062
gi|212549782 caspase 8 associated protein 2 [Homo sapiens] 39 0.081
gi|6912288 caspase 8 associated protein 2 [Homo sapiens] 39 0.081
gi|212549532 caspase 8 associated protein 2 [Homo sapiens] 39 0.081
gi|21536423 amphiphysin isoform 2 [Homo sapiens] 39 0.081
gi|157817073 Cdc2-related kinase, arginine/serine-rich isoform 2... 39 0.081
gi|157817023 Cdc2-related kinase, arginine/serine-rich isoform 1... 39 0.081
gi|150170670 piccolo isoform 2 [Homo sapiens] 39 0.081
gi|150378539 piccolo isoform 1 [Homo sapiens] 39 0.081
gi|75677612 leucine rich repeat containing 37, member A3 [Homo s... 39 0.081
gi|217416332 trinucleotide repeat containing 6C isoform 1 [Homo ... 38 0.11
gi|33413425 trinucleotide repeat containing 6C isoform 2 [Homo s... 38 0.11
>gi|148806891 hypothetical protein LOC54906 [Homo sapiens]
Length = 2430
Score = 4839 bits (12551), Expect = 0.0
Identities = 2430/2430 (100%), Positives = 2430/2430 (100%)
Query: 1 MAPPAHKSILERSENVLMSPWKGKLIVQDRMLCDIALWSTYGAMIPTQLPQELDFKYVMK 60
MAPPAHKSILERSENVLMSPWKGKLIVQDRMLCDIALWSTYGAMIPTQLPQELDFKYVMK
Sbjct: 1 MAPPAHKSILERSENVLMSPWKGKLIVQDRMLCDIALWSTYGAMIPTQLPQELDFKYVMK 60
Query: 61 VSSLKKRLPEAAFRKQNYLEEKVCFQDLCFNLYEVELSNRQGENIDKLTECIKNKQLAII 120
VSSLKKRLPEAAFRKQNYLEEKVCFQDLCFNLYEVELSNRQGENIDKLTECIKNKQLAII
Sbjct: 61 VSSLKKRLPEAAFRKQNYLEEKVCFQDLCFNLYEVELSNRQGENIDKLTECIKNKQLAII 120
Query: 121 KCLEDRGFFILLTSSALLSEPDFGGKQMGLHGLHLFRSPLSTGVKDLKVEDDISMKVIPI 180
KCLEDRGFFILLTSSALLSEPDFGGKQMGLHGLHLFRSPLSTGVKDLKVEDDISMKVIPI
Sbjct: 121 KCLEDRGFFILLTSSALLSEPDFGGKQMGLHGLHLFRSPLSTGVKDLKVEDDISMKVIPI 180
Query: 181 LSTLNCALLETKKSLPEERIHPNTLVKRHFQELYKADRSPSLSVAPQDRMKDPTFLGKLP 240
LSTLNCALLETKKSLPEERIHPNTLVKRHFQELYKADRSPSLSVAPQDRMKDPTFLGKLP
Sbjct: 181 LSTLNCALLETKKSLPEERIHPNTLVKRHFQELYKADRSPSLSVAPQDRMKDPTFLGKLP 240
Query: 241 SGFDLIPPAEKCPSESLTQLNSYFSDPSAYILEVSTALDLLAEHPQSPCVSDGICDAGFS 300
SGFDLIPPAEKCPSESLTQLNSYFSDPSAYILEVSTALDLLAEHPQSPCVSDGICDAGFS
Sbjct: 241 SGFDLIPPAEKCPSESLTQLNSYFSDPSAYILEVSTALDLLAEHPQSPCVSDGICDAGFS 300
Query: 301 LVMTPDPEFLVSEAEVRKETETKKDSEEMLKAKKRVFPLSPASNLRVQPKRKASMPHMVQ 360
LVMTPDPEFLVSEAEVRKETETKKDSEEMLKAKKRVFPLSPASNLRVQPKRKASMPHMVQ
Sbjct: 301 LVMTPDPEFLVSEAEVRKETETKKDSEEMLKAKKRVFPLSPASNLRVQPKRKASMPHMVQ 360
Query: 361 SKKVNLCRPFPKRTASRADNSSDSPTTLKLVKGQFPQKRKRGAEVLTAQFVQKTKLDRKN 420
SKKVNLCRPFPKRTASRADNSSDSPTTLKLVKGQFPQKRKRGAEVLTAQFVQKTKLDRKN
Sbjct: 361 SKKVNLCRPFPKRTASRADNSSDSPTTLKLVKGQFPQKRKRGAEVLTAQFVQKTKLDRKN 420
Query: 421 QEAPISKDVPVPTNAKRARKQEKSPVKTVPRAKPPVKKSPQKQRVNIVKGNENPRNRKQL 480
QEAPISKDVPVPTNAKRARKQEKSPVKTVPRAKPPVKKSPQKQRVNIVKGNENPRNRKQL
Sbjct: 421 QEAPISKDVPVPTNAKRARKQEKSPVKTVPRAKPPVKKSPQKQRVNIVKGNENPRNRKQL 480
Query: 481 QPVKGETASKLQSEISRGCQEDGISINSVQPENTTAAHNDLPENSIVNYDSQALNMLADL 540
QPVKGETASKLQSEISRGCQEDGISINSVQPENTTAAHNDLPENSIVNYDSQALNMLADL
Sbjct: 481 QPVKGETASKLQSEISRGCQEDGISINSVQPENTTAAHNDLPENSIVNYDSQALNMLADL 540
Query: 541 ALSSATSSTPVSEARNLHCSSELPQNDVLLSKENSLRGTSDHEYHRGVKTQKGELLPNPS 600
ALSSATSSTPVSEARNLHCSSELPQNDVLLSKENSLRGTSDHEYHRGVKTQKGELLPNPS
Sbjct: 541 ALSSATSSTPVSEARNLHCSSELPQNDVLLSKENSLRGTSDHEYHRGVKTQKGELLPNPS 600
Query: 601 SDRKSNSGSDLTVSQDEESLVPCSQAPAKAQSALTEEMLESSDASQSSSVSVEHSYALLL 660
SDRKSNSGSDLTVSQDEESLVPCSQAPAKAQSALTEEMLESSDASQSSSVSVEHSYALLL
Sbjct: 601 SDRKSNSGSDLTVSQDEESLVPCSQAPAKAQSALTEEMLESSDASQSSSVSVEHSYALLL 660
Query: 661 TEHSKKHLQEREILSPLFPRNGTKSPEAATPVGKVMPFRHQPGLLLQQKPPDDPVVKPKD 720
TEHSKKHLQEREILSPLFPRNGTKSPEAATPVGKVMPFRHQPGLLLQQKPPDDPVVKPKD
Sbjct: 661 TEHSKKHLQEREILSPLFPRNGTKSPEAATPVGKVMPFRHQPGLLLQQKPPDDPVVKPKD 720
Query: 721 RPPSARVKKSSCSRIVLSCDDSVKITFKCETEYAFSLDSKYTNNPLEKTVVRALHGPWNT 780
RPPSARVKKSSCSRIVLSCDDSVKITFKCETEYAFSLDSKYTNNPLEKTVVRALHGPWNT
Sbjct: 721 RPPSARVKKSSCSRIVLSCDDSVKITFKCETEYAFSLDSKYTNNPLEKTVVRALHGPWNT 780
Query: 781 DLPDNVEEVKLLLHMWVALFYSNQNKIIRSSRKVVEHSNPAKYVSINSTLESCELREIEE 840
DLPDNVEEVKLLLHMWVALFYSNQNKIIRSSRKVVEHSNPAKYVSINSTLESCELREIEE
Sbjct: 781 DLPDNVEEVKLLLHMWVALFYSNQNKIIRSSRKVVEHSNPAKYVSINSTLESCELREIEE 840
Query: 841 SLGLEKCSADSLLETNEISRAHAAEVSFRDPNCLLPFIKTPLTQGLELCVQNEQKKTFAR 900
SLGLEKCSADSLLETNEISRAHAAEVSFRDPNCLLPFIKTPLTQGLELCVQNEQKKTFAR
Sbjct: 841 SLGLEKCSADSLLETNEISRAHAAEVSFRDPNCLLPFIKTPLTQGLELCVQNEQKKTFAR 900
Query: 901 ECDPDTQEDQNFICSYNNEVTGEEAKQESLETSNLVLSGIGSTQTNGPSVPSEEEIVQPL 960
ECDPDTQEDQNFICSYNNEVTGEEAKQESLETSNLVLSGIGSTQTNGPSVPSEEEIVQPL
Sbjct: 901 ECDPDTQEDQNFICSYNNEVTGEEAKQESLETSNLVLSGIGSTQTNGPSVPSEEEIVQPL 960
Query: 961 DSTRVASYSGTVTQATFTRTYDGPGSQPVICQSSVYGTLENKVDILDAAVQTKTGTLQDL 1020
DSTRVASYSGTVTQATFTRTYDGPGSQPVICQSSVYGTLENKVDILDAAVQTKTGTLQDL
Sbjct: 961 DSTRVASYSGTVTQATFTRTYDGPGSQPVICQSSVYGTLENKVDILDAAVQTKTGTLQDL 1020
Query: 1021 IQHGSPINNECHPSLERKDDNMGCAVINPEPITLTFEKNAHVPIQTEGVNTADERTTFKK 1080
IQHGSPINNECHPSLERKDDNMGCAVINPEPITLTFEKNAHVPIQTEGVNTADERTTFKK
Sbjct: 1021 IQHGSPINNECHPSLERKDDNMGCAVINPEPITLTFEKNAHVPIQTEGVNTADERTTFKK 1080
Query: 1081 ELIKQVSPAASLRHPVSTSENARTQGLRDIPSLVVAGQKGTKYLCASSVGGETLDKAVCS 1140
ELIKQVSPAASLRHPVSTSENARTQGLRDIPSLVVAGQKGTKYLCASSVGGETLDKAVCS
Sbjct: 1081 ELIKQVSPAASLRHPVSTSENARTQGLRDIPSLVVAGQKGTKYLCASSVGGETLDKAVCS 1140
Query: 1141 LQKETPLPVSLPSDKTMVMEALSLAKSSSHLSPSEEVRCTQDFLSQTQSLLGLSSEGLLE 1200
LQKETPLPVSLPSDKTMVMEALSLAKSSSHLSPSEEVRCTQDFLSQTQSLLGLSSEGLLE
Sbjct: 1141 LQKETPLPVSLPSDKTMVMEALSLAKSSSHLSPSEEVRCTQDFLSQTQSLLGLSSEGLLE 1200
Query: 1201 LTQVEVDSSSASTTLGRQCSLNCISSGCHTSGDSLELRKNHKNGPNTENMNLEAFDSVFI 1260
LTQVEVDSSSASTTLGRQCSLNCISSGCHTSGDSLELRKNHKNGPNTENMNLEAFDSVFI
Sbjct: 1201 LTQVEVDSSSASTTLGRQCSLNCISSGCHTSGDSLELRKNHKNGPNTENMNLEAFDSVFI 1260
Query: 1261 KQTSLSVSREVSLELSEEDSDIDLALTISPPTSPREEMPAGEIEQFEEAPFSNLELQDVA 1320
KQTSLSVSREVSLELSEEDSDIDLALTISPPTSPREEMPAGEIEQFEEAPFSNLELQDVA
Sbjct: 1261 KQTSLSVSREVSLELSEEDSDIDLALTISPPTSPREEMPAGEIEQFEEAPFSNLELQDVA 1320
Query: 1321 EEIGEPEEVALTESREVSSADNVSVYPSVSEEPVENKERKGDNLQPVTLILSKENCTLEI 1380
EEIGEPEEVALTESREVSSADNVSVYPSVSEEPVENKERKGDNLQPVTLILSKENCTLEI
Sbjct: 1321 EEIGEPEEVALTESREVSSADNVSVYPSVSEEPVENKERKGDNLQPVTLILSKENCTLEI 1380
Query: 1381 AEEINVTSDFPFDSVIEEVSPASSPEPPVPVKETRPYQAVTPCILKLHGTQCEKSNQISQ 1440
AEEINVTSDFPFDSVIEEVSPASSPEPPVPVKETRPYQAVTPCILKLHGTQCEKSNQISQ
Sbjct: 1381 AEEINVTSDFPFDSVIEEVSPASSPEPPVPVKETRPYQAVTPCILKLHGTQCEKSNQISQ 1440
Query: 1441 CESEDLGITEKENVFVGPTHPVGQDNFTQVQQMQVSAEMPLILTDHPGRTGRPTLPGKVT 1500
CESEDLGITEKENVFVGPTHPVGQDNFTQVQQMQVSAEMPLILTDHPGRTGRPTLPGKVT
Sbjct: 1441 CESEDLGITEKENVFVGPTHPVGQDNFTQVQQMQVSAEMPLILTDHPGRTGRPTLPGKVT 1500
Query: 1501 EEIVSSEHDEGLSFSGKVQCYGRELNQPASAAKCTGDFSPSPEKLVKSGNPLQPVSIENR 1560
EEIVSSEHDEGLSFSGKVQCYGRELNQPASAAKCTGDFSPSPEKLVKSGNPLQPVSIENR
Sbjct: 1501 EEIVSSEHDEGLSFSGKVQCYGRELNQPASAAKCTGDFSPSPEKLVKSGNPLQPVSIENR 1560
Query: 1561 NLDLKHLVLESSEPPFGPRNVIENKSLSDTLVSTTAPSGIVNVSVKQQTSPKSSQNHLFP 1620
NLDLKHLVLESSEPPFGPRNVIENKSLSDTLVSTTAPSGIVNVSVKQQTSPKSSQNHLFP
Sbjct: 1561 NLDLKHLVLESSEPPFGPRNVIENKSLSDTLVSTTAPSGIVNVSVKQQTSPKSSQNHLFP 1620
Query: 1621 GDLKTDEGIYLQVKSLTAASVDGAYSTQGCMCSVVPTLCSSSDNATLTHYVRPINAEPVF 1680
GDLKTDEGIYLQVKSLTAASVDGAYSTQGCMCSVVPTLCSSSDNATLTHYVRPINAEPVF
Sbjct: 1621 GDLKTDEGIYLQVKSLTAASVDGAYSTQGCMCSVVPTLCSSSDNATLTHYVRPINAEPVF 1680
Query: 1681 QAQEIPAGRMASLLKNGEPEAELHKETTGPGTAGPQSNTTSSLKGERKAIHTLQDVSTCE 1740
QAQEIPAGRMASLLKNGEPEAELHKETTGPGTAGPQSNTTSSLKGERKAIHTLQDVSTCE
Sbjct: 1681 QAQEIPAGRMASLLKNGEPEAELHKETTGPGTAGPQSNTTSSLKGERKAIHTLQDVSTCE 1740
Query: 1741 TKELLNVGVSSLCAGPYQNTADTKENLSKEPLASFVSESFDTSVCGIATEHVEIENSGEG 1800
TKELLNVGVSSLCAGPYQNTADTKENLSKEPLASFVSESFDTSVCGIATEHVEIENSGEG
Sbjct: 1741 TKELLNVGVSSLCAGPYQNTADTKENLSKEPLASFVSESFDTSVCGIATEHVEIENSGEG 1800
Query: 1801 LRAEAGSETLGRDGEVGVNSDMHYELSGDSDLDLLGDCRNPRLDLEDSYTLRGSYTRKKD 1860
LRAEAGSETLGRDGEVGVNSDMHYELSGDSDLDLLGDCRNPRLDLEDSYTLRGSYTRKKD
Sbjct: 1801 LRAEAGSETLGRDGEVGVNSDMHYELSGDSDLDLLGDCRNPRLDLEDSYTLRGSYTRKKD 1860
Query: 1861 VPTDGYESSLNFHNNNQEDWGCSSWVPGMETSLPPGHWTAAVKKEEKCVPPYVQIRDLHG 1920
VPTDGYESSLNFHNNNQEDWGCSSWVPGMETSLPPGHWTAAVKKEEKCVPPYVQIRDLHG
Sbjct: 1861 VPTDGYESSLNFHNNNQEDWGCSSWVPGMETSLPPGHWTAAVKKEEKCVPPYVQIRDLHG 1920
Query: 1921 ILRTYANFSITKELKDTMRTSHGLRRHPSFSANCGLPSSWTSTWQVADDLTQNTLDLEYL 1980
ILRTYANFSITKELKDTMRTSHGLRRHPSFSANCGLPSSWTSTWQVADDLTQNTLDLEYL
Sbjct: 1921 ILRTYANFSITKELKDTMRTSHGLRRHPSFSANCGLPSSWTSTWQVADDLTQNTLDLEYL 1980
Query: 1981 RFAHKLKQTIKNGDSQHSASSANVFPKESPTQISIGAFPSTKISEAPFLHPAPRSRSPLL 2040
RFAHKLKQTIKNGDSQHSASSANVFPKESPTQISIGAFPSTKISEAPFLHPAPRSRSPLL
Sbjct: 1981 RFAHKLKQTIKNGDSQHSASSANVFPKESPTQISIGAFPSTKISEAPFLHPAPRSRSPLL 2040
Query: 2041 VTVVESDPRPQGQPRRGYTASSLDSSSSWRERCSHNRDLRNSQRNHTVSFHLNKLKYNST 2100
VTVVESDPRPQGQPRRGYTASSLDSSSSWRERCSHNRDLRNSQRNHTVSFHLNKLKYNST
Sbjct: 2041 VTVVESDPRPQGQPRRGYTASSLDSSSSWRERCSHNRDLRNSQRNHTVSFHLNKLKYNST 2100
Query: 2101 VKESRNDISLILNEYAEFNKVMKNSNQFIFQDKELNDVSGEATAQEMYLPFPGRSASYED 2160
VKESRNDISLILNEYAEFNKVMKNSNQFIFQDKELNDVSGEATAQEMYLPFPGRSASYED
Sbjct: 2101 VKESRNDISLILNEYAEFNKVMKNSNQFIFQDKELNDVSGEATAQEMYLPFPGRSASYED 2160
Query: 2161 IIIDVCTNLHVKLRSVVKEACKSTFLFYLVETEDKSFFVRTKNLLRKGGHTEIEPQHFCQ 2220
IIIDVCTNLHVKLRSVVKEACKSTFLFYLVETEDKSFFVRTKNLLRKGGHTEIEPQHFCQ
Sbjct: 2161 IIIDVCTNLHVKLRSVVKEACKSTFLFYLVETEDKSFFVRTKNLLRKGGHTEIEPQHFCQ 2220
Query: 2221 AFHRENDTLIIIIRNEDISSHLHQIPSLLKLKHFPSVIFAGVDSPGDVLDHTYQELFRAG 2280
AFHRENDTLIIIIRNEDISSHLHQIPSLLKLKHFPSVIFAGVDSPGDVLDHTYQELFRAG
Sbjct: 2221 AFHRENDTLIIIIRNEDISSHLHQIPSLLKLKHFPSVIFAGVDSPGDVLDHTYQELFRAG 2280
Query: 2281 GFVISDDKILEAVTLVQLKEIIKILEKLNGNGRWKWLLHYRENKKLKEDERVDSTAHKKN 2340
GFVISDDKILEAVTLVQLKEIIKILEKLNGNGRWKWLLHYRENKKLKEDERVDSTAHKKN
Sbjct: 2281 GFVISDDKILEAVTLVQLKEIIKILEKLNGNGRWKWLLHYRENKKLKEDERVDSTAHKKN 2340
Query: 2341 IMLKSFQSANIIELLHYHQCDSRSSTKAEILKCLLNLQIQHIDARFAVLLTDKPTIPREV 2400
IMLKSFQSANIIELLHYHQCDSRSSTKAEILKCLLNLQIQHIDARFAVLLTDKPTIPREV
Sbjct: 2341 IMLKSFQSANIIELLHYHQCDSRSSTKAEILKCLLNLQIQHIDARFAVLLTDKPTIPREV 2400
Query: 2401 FENSGILVTDVNNFIENIEKIAAPFRSSYW 2430
FENSGILVTDVNNFIENIEKIAAPFRSSYW
Sbjct: 2401 FENSGILVTDVNNFIENIEKIAAPFRSSYW 2430
>gi|163838631 retinoblastoma-associated protein 140 isoform a [Homo
sapiens]
Length = 1512
Score = 182 bits (461), Expect = 5e-45
Identities = 136/465 (29%), Positives = 232/465 (49%), Gaps = 22/465 (4%)
Query: 1969 DLTQNTLDLEYLRFAHKLKQTIKNGDSQH-SASSANVFPKESPTQISIGAFPSTKISEAP 2027
+ T+ T+ EY F+ K+++ +K + + S S +F + + + F +K S+A
Sbjct: 1015 ETTERTVLGEYNLFSRKIEEILKQKNVSYVSTVSTPIFSTQEKMK-RLSEFIYSKTSKAG 1073
Query: 2028 FLHPAPRSRSPLLVTVVESDPRPQGQPRRGYTASSLDSSSSWRERCSHNRDLRNSQRNHT 2087
L ++++ + P S +S+ ER H + +S N+
Sbjct: 1074 VQEFVDGLHEKLNTIIIKASAKGGNLPPVSPNDSGAKIASNPLER--HVIPVSSSDFNNK 1131
Query: 2088 VSFHLNKLKYNSTVKESRND--------ISLILNEYAEFNKVMKNSNQFIFQDKELNDVS 2139
HL + + +K++ +D + +N+ ++M S+ + D V
Sbjct: 1132 ---HLLEPLCSDPLKDTNSDEQHSTSALTEVEMNQPQHATELMVTSDHIVPGDMAREPVE 1188
Query: 2140 GEATAQEMYLPFPGRSASYEDIIIDVCTNLHVKLRSVVKEACKSTFLFYLVETEDKSFFV 2199
E T + + A + I + + L ++K+ K+T FY+ E E+
Sbjct: 1189 -ETTKSPSDVNISAQPA-LSNFISQLEPEVFNSLVKIMKDVQKNTVKFYIHEEEESVLCK 1246
Query: 2200 RTKNLLRKGGHTEIEPQHFCQAFHRENDTLIIIIRNEDISSHLHQIPSLLKLKHFPSVIF 2259
K L K G+TE P+ F + + D L+III+NEDI+ +H+IP L+ LK P V F
Sbjct: 1247 EIKEYLIKLGNTECHPEQFLER-RSKLDKLLIIIQNEDIAGFIHKIPGLVTLKKLPCVSF 1305
Query: 2260 AGVDSPGDVLDHTYQELFRAGGFVISDDKIL--EAVTLVQLKEIIKILEKLN-GNGRWKW 2316
AGVDS DV +HTY ELF +GGF++SD+ IL E VT+ LK + LE+L+ G+W+W
Sbjct: 1306 AGVDSLDDVKNHTYNELFVSGGFIVSDESILNPEVVTVENLKNFLTFLEELSTPEGKWQW 1365
Query: 2317 LLHYRENKKLKEDERVDSTAHKKNIMLKSFQSANIIELLHYHQCDSRSSTKAEILKCLLN 2376
+H + KKLKE R+++ A +L +Q +++E+L YH CDS++ E L CL+
Sbjct: 1366 KVHCKFQKKLKELGRLNAKALSLLTLLNVYQKKHLVEILSYHNCDSQTRNAPE-LDCLIR 1424
Query: 2377 LQIQHIDARFAVLLTDKPTIPREVFENSGILVTDVNNFIENIEKI 2421
LQ Q+I R V LT+K + ++GI+V +F++N + +
Sbjct: 1425 LQAQNIQQRHIVFLTEKNIKMLSSYTDNGIVVATAEDFMQNFKNL 1469
Score = 96.7 bits (239), Expect = 3e-19
Identities = 76/278 (27%), Positives = 133/278 (47%), Gaps = 24/278 (8%)
Query: 21 WKGKLIVQDRMLCDIALWSTYGAMIPTQLPQELDFKYVMKVSSLKKRLPEAAFRKQNYL- 79
WKG+L+ + ++LC I+L S A +P +LP++LD + VM + LK+++P A F K+ YL
Sbjct: 359 WKGQLLNKGKLLCYISLRSATRAFLPIKLPEKLDVETVMSIDHLKQKIPPALFYKETYLG 418
Query: 80 EEKVCFQDLCFNLYEVELSNRQGENIDKLTECIKNKQLAIIKCLEDRGFFILLTSSALLS 139
+V + +LYEV R G N++ L + + ++L ++K L DRG+ LL+ ++
Sbjct: 419 PNEVLKNGMYCSLYEVVEKTRIGSNMESLLQKLDREKLVLVKPLGDRGYLFLLSPYQMVP 478
Query: 140 EPDF-GGKQMGLHGLHLFRSPLST------GVKDLKVEDDISM-KVIPILSTLNCALLET 191
++ K LH L LF+ P S E SM V+ I L +L++
Sbjct: 479 PYEYQTAKSRVLHALFLFQEPRSIVTSQKGSTNAAPQERHESMPDVLKIAQFLQFSLIQC 538
Query: 192 KKSLPE-ERIHPNTLVKRHFQELYK----ADRSPSLSVAPQDRMKDPTFLGKLPSGFDLI 246
+K I+ +++V+++ E +K + + + R+ D FL P
Sbjct: 539 RKEFKNISAINFHSVVEKYVSEFFKRGFGSGKREFIMFPYDSRLDDKKFLYSAP------ 592
Query: 247 PPAEKCPSESLTQLNSYFSDPSAYILEVSTALDLLAEH 284
+ S T L++Y P Y L + +L E+
Sbjct: 593 ----RNKSHIDTCLHAYIFRPEVYQLPICKLKELFEEN 626
>gi|163838629 retinoblastoma-associated protein 140 isoform b [Homo
sapiens]
Length = 1233
Score = 182 bits (461), Expect = 5e-45
Identities = 136/465 (29%), Positives = 232/465 (49%), Gaps = 22/465 (4%)
Query: 1969 DLTQNTLDLEYLRFAHKLKQTIKNGDSQH-SASSANVFPKESPTQISIGAFPSTKISEAP 2027
+ T+ T+ EY F+ K+++ +K + + S S +F + + + F +K S+A
Sbjct: 578 ETTERTVLGEYNLFSRKIEEILKQKNVSYVSTVSTPIFSTQEKMK-RLSEFIYSKTSKAG 636
Query: 2028 FLHPAPRSRSPLLVTVVESDPRPQGQPRRGYTASSLDSSSSWRERCSHNRDLRNSQRNHT 2087
L ++++ + P S +S+ ER H + +S N+
Sbjct: 637 VQEFVDGLHEKLNTIIIKASAKGGNLPPVSPNDSGAKIASNPLER--HVIPVSSSDFNNK 694
Query: 2088 VSFHLNKLKYNSTVKESRND--------ISLILNEYAEFNKVMKNSNQFIFQDKELNDVS 2139
HL + + +K++ +D + +N+ ++M S+ + D V
Sbjct: 695 ---HLLEPLCSDPLKDTNSDEQHSTSALTEVEMNQPQHATELMVTSDHIVPGDMAREPVE 751
Query: 2140 GEATAQEMYLPFPGRSASYEDIIIDVCTNLHVKLRSVVKEACKSTFLFYLVETEDKSFFV 2199
E T + + A + I + + L ++K+ K+T FY+ E E+
Sbjct: 752 -ETTKSPSDVNISAQPA-LSNFISQLEPEVFNSLVKIMKDVQKNTVKFYIHEEEESVLCK 809
Query: 2200 RTKNLLRKGGHTEIEPQHFCQAFHRENDTLIIIIRNEDISSHLHQIPSLLKLKHFPSVIF 2259
K L K G+TE P+ F + + D L+III+NEDI+ +H+IP L+ LK P V F
Sbjct: 810 EIKEYLIKLGNTECHPEQFLER-RSKLDKLLIIIQNEDIAGFIHKIPGLVTLKKLPCVSF 868
Query: 2260 AGVDSPGDVLDHTYQELFRAGGFVISDDKIL--EAVTLVQLKEIIKILEKLN-GNGRWKW 2316
AGVDS DV +HTY ELF +GGF++SD+ IL E VT+ LK + LE+L+ G+W+W
Sbjct: 869 AGVDSLDDVKNHTYNELFVSGGFIVSDESILNPEVVTVENLKNFLTFLEELSTPEGKWQW 928
Query: 2317 LLHYRENKKLKEDERVDSTAHKKNIMLKSFQSANIIELLHYHQCDSRSSTKAEILKCLLN 2376
+H + KKLKE R+++ A +L +Q +++E+L YH CDS++ E L CL+
Sbjct: 929 KVHCKFQKKLKELGRLNAKALSLLTLLNVYQKKHLVEILSYHNCDSQTRNAPE-LDCLIR 987
Query: 2377 LQIQHIDARFAVLLTDKPTIPREVFENSGILVTDVNNFIENIEKI 2421
LQ Q+I R V LT+K + ++GI+V +F++N + +
Sbjct: 988 LQAQNIQQRHIVFLTEKNIKMLSSYTDNGIVVATAEDFMQNFKNL 1032
Score = 63.9 bits (154), Expect = 2e-09
Identities = 60/240 (25%), Positives = 106/240 (44%), Gaps = 24/240 (10%)
Query: 59 MKVSSLKKRLPEAAFRKQNYL-EEKVCFQDLCFNLYEVELSNRQGENIDKLTECIKNKQL 117
M + LK+++P A F K+ YL +V + +LYEV R G N++ L + + ++L
Sbjct: 1 MSIDHLKQKIPPALFYKETYLGPNEVLKNGMYCSLYEVVEKTRIGSNMESLLQKLDREKL 60
Query: 118 AIIKCLEDRGFFILLTSSALLSEPDF-GGKQMGLHGLHLFRSPLST------GVKDLKVE 170
++K L DRG+ LL+ ++ ++ K LH L LF+ P S E
Sbjct: 61 VLVKPLGDRGYLFLLSPYQMVPPYEYQTAKSRVLHALFLFQEPRSIVTSQKGSTNAAPQE 120
Query: 171 DDISM-KVIPILSTLNCALLETKKSLPE-ERIHPNTLVKRHFQELYK----ADRSPSLSV 224
SM V+ I L +L++ +K I+ +++V+++ E +K + + +
Sbjct: 121 RHESMPDVLKIAQFLQFSLIQCRKEFKNISAINFHSVVEKYVSEFFKRGFGSGKREFIMF 180
Query: 225 APQDRMKDPTFLGKLPSGFDLIPPAEKCPSESLTQLNSYFSDPSAYILEVSTALDLLAEH 284
R+ D FL P + S T L++Y P Y L + +L E+
Sbjct: 181 PYDSRLDDKKFLYSAP----------RNKSHIDTCLHAYIFRPEVYQLPICKLKELFEEN 230
>gi|83367077 mucin 16 [Homo sapiens]
Length = 14507
Score = 45.1 bits (105), Expect = 9e-04
Identities = 160/815 (19%), Positives = 302/815 (37%), Gaps = 117/815 (14%)
Query: 941 GSTQTNGPSVPSEEEIVQPLDSTRVASYSGTVTQATFTRTYDGPGSQPVICQSSVYGTLE 1000
G + PS S E+ P S+ V+S S T ++ S PV S +
Sbjct: 9415 GPEDVSWPSPLSVEKNSPP--SSLVSSSSVTSPSPLYSTPSGSSHSSPVPVTSLFTSIMM 9472
Query: 1001 NKVDILDAAVQTKTGTLQDLIQHGSPINNECHPSLE-RKDDNMGCAVINPEPITL-TFEK 1058
D+LDA+++ +T + P++ D+++ + E + FE
Sbjct: 9473 KATDMLDASLEPETTSA---------------PNMNITSDESLAASKATTETEAIHVFEN 9517
Query: 1059 NAHVPIQ----TEGVNTADERTTFKKELIKQVSPAASLRHPVSTSENARTQGLRDIP--- 1111
A ++ TE + ++ + ++I V ++S+R + ++ + G+ I
Sbjct: 9518 TAASHVETTSATEELYSSSPGFSEPTKVISPVVTSSSIRDNMVSTTMPGSSGITRIEIES 9577
Query: 1112 -SLVVAGQKGTKY---LCASSVGGETLDKAVCSLQKETPLPVSLPSDKTMVMEALSLAKS 1167
S + G + T+ + +S+ L K E +PS +T + A+S
Sbjct: 9578 MSSLTPGLRETRTSQDITSSTETSTVLYKMPSGATPEVSRTEVMPSSRTSIP---GPAQS 9634
Query: 1168 SSHLSPSEEVRCTQDFLSQTQSLLGLSSEGLLELTQVEVDSSSASTTLGRQCSLNCISSG 1227
+ L S+EV + S + S + TQ +++ TL S+ +S
Sbjct: 9635 TMSLDISDEV-----VTRLSTSPIMTESAEITITTQTGYSLATSQVTLPLGTSMTFLSGT 9689
Query: 1228 CHTSGDSL---ELRKNHKNGPNTENMNLEAFDSVFIKQTSLSVSREVSLELSEEDSDIDL 1284
T L E+ GP + + F +T+ S S SL L+ S +
Sbjct: 9690 HSTMSQGLSHSEMTNLMSRGPESLSWTSPRF-----VETTRSSSSLTSLPLTTSLSPVSS 9744
Query: 1285 ALTISPPTSPREEMPAGEI-------------EQFEEAPFSNLELQDVAEEIGEPEEVAL 1331
L S P+SP +P + E S+ L + EI E+ +
Sbjct: 9745 TLLDSSPSSP---LPVTSLILPGLVKTTEVLDTSSEPKTSSSPNLSSTSVEIPATSEI-M 9800
Query: 1332 TESREVSSADNVSVYPSVSEEPVENKERKGDNLQPVTLILSKENCTLEIAEEINVTSDFP 1391
T++ ++ + N +V + V + +L+ T+ I + +TS
Sbjct: 9801 TDTEKIHPSSNTAVAKVRTSSSVHESH---------SSVLADSETTITI-PSMGITSAVD 9850
Query: 1392 FDSVIEEVSPASSPEPPVPVKETRPYQAVTPCILKLHGTQCEKSNQISQCESEDLGITEK 1451
D+ + +PA S +P T P ++TP + + E ITE
Sbjct: 9851 -DTTVFTSNPAFSETRRIP---TEPTFSLTPGFRE------------TSTSEETTSITET 9894
Query: 1452 ENVFVGPTHPVGQDNFTQVQQMQVSAEMPLILTDHPGRTGRPTLPGKVTEEIVSSEHDEG 1511
V G V T+V ++ + + + D T P + +TE I
Sbjct: 9895 SAVLYG----VPTSATTEVSMTEIMSSNRIHIPDSDQSTMSPDI---ITEVITRLSSSSM 9947
Query: 1512 LSFSGKVQCYGRELNQPASAAKCTGDFSPSPEKLVKSGNPLQPVSIENRNLDLKHLVLES 1571
+S S ++ ++ + P + A+ T + + L ++ + + P + + ++ L+ S
Sbjct: 9948 MSESTQMTITTQK-SSPGATAQSTLTLATTTAPLARTHSTVPPRFLHS---EMTTLMSRS 10003
Query: 1572 SEPPFGPRNV-IENKSLSDTLVS---TTAPSGIVNVSVKQQTSPKSSQNHLFPGDLKTDE 1627
E P ++ +E S S +L+S TT+PS + +S S + L PG +KT
Sbjct: 10004 PENPSWKSSLFVEKTSSSSSLLSLPVTTSPSVSSTLPQSIPSSSFSVTSLLTPGMVKT-- 10061
Query: 1628 GIYLQVKSLTAASVDGAYSTQGCMCSVVPTLCSSSDNATLTHYVRPINAEPVFQAQEIPA 1687
T S + S + + ++S+ T T + P ++ V +
Sbjct: 10062 ---------TDTSTEPGTSLSPNLSGTSVEILAASEVTTDTEKIHPSSSMAVTNVGTTSS 10112
Query: 1688 GRMASLLKNGEPEAELHKETTGPGTAGPQSNTTSS 1722
G L + +E K T GT + T+ S
Sbjct: 10113 GH--ELYSSVSIHSEPSKATYPVGTPSSMAETSIS 10145
Score = 34.3 bits (77), Expect = 1.5
Identities = 157/793 (19%), Positives = 280/793 (35%), Gaps = 145/793 (18%)
Query: 1063 PIQTEGVNTADERTTFKKELIKQVSPAASLRHPVSTSENARTQGLRDIPSLVVAGQKGTK 1122
P TE +N+ E T IK+V+ ++S+ ++T + G PS K +
Sbjct: 3880 PWITEMMNSVSEDT------IKEVTSSSSVLRTLNTLDINLESGTTSSPSW-----KSSP 3928
Query: 1123 YLCASSVGGETLDKAVCSLQKETPLPVSLPSDKTMVMEALSLAKSSSHLSPSEEVRCTQD 1182
Y E + + + KE P + + T + + A S+ + S + T
Sbjct: 3929 Y--------ERIAPSESTTDKEAIHPSTNTVETTGWVTSSEHASHSTIPAHSASSKLTSP 3980
Query: 1183 FLSQT---QSLLGLSSEGLLELTQVEVDSSSASTTLGRQCSLNC-ISSGCHTSGDSLELR 1238
++ + Q+++ +S+ E T+ + +S T R S SS TS S
Sbjct: 3981 VVTTSTREQAIVSMSTTTWPESTRARTEPNSFLTIELRDVSPYMDTSSTTQTSIISSPGS 4040
Query: 1239 KNHKNGPNTENMNLEAFDSVFIKQT-------SLSVSREVSLELSEEDSDIDLALTISPP 1291
GP TE + + S F+ Q+ S +++R + E + LA+ SPP
Sbjct: 4041 TAITKGPRTEITSSKRISSSFLAQSMRSSDSPSEAITRLSNFPAMTESGGMILAMQTSPP 4100
Query: 1292 --------------TSPREEMPAGEIEQFEEAPFSNLELQDVAEEIGEPEEVALTESREV 1337
T+ P ++F + + L E+ +P ++ E+
Sbjct: 4101 GATSLSAPTLDTSATASWTGTPLATTQRFTYSEKTTL-FSKGPEDTSQPSPPSVEETSSS 4159
Query: 1338 SSADNVSVYPSVSEEPVENKERKGDNLQPVTLILSKENCTLEIAEEINVTSDFP------ 1391
SS + S S + ++ + PVT + E L +++ S P
Sbjct: 4160 SSLVPIHATTSPSNILLTSQGHSPSSTPPVTSVFLSETSGLGKTTDMSRISLEPGTSLPP 4219
Query: 1392 -------------------------FDSVIEEVSPASSPEPPVPVKETRPYQAVTPCILK 1426
D+ + + SS P+P T+P +A +P +
Sbjct: 4220 NLSSTAGEALSTYEASRDTKAIHHSADTAVTNMEATSSEYSPIP-GHTKPSKATSPLVTS 4278
Query: 1427 ------LHGTQCEKSNQISQCE---SEDLGITEKENVFVGP---------THPVGQDNFT 1468
T S++ ++ E S + G+ E+ V TH D T
Sbjct: 4279 HIMGDITSSTSVFGSSETTEIETVSSVNQGLQERSTSQVASSATETSTVITHVSSGDATT 4338
Query: 1469 QVQQMQVS-AEMPLILTDHPGRTGRPTLPGKVTEEIVSSEHDEGLSFSGKVQCYGRELNQ 1527
V + Q + + I + H T T T S E + Q
Sbjct: 4339 HVTKTQATFSSGTSISSPHQFITSTNTFTDVSTNPSTSLIMTESSGVTITTQ-------- 4390
Query: 1528 PASAAKCTGDFSPSPEKLVKSGNPL---QPVSIENRNLDLKHLVLESSEPP----FGPRN 1580
TG + P L S P P+++ + + L S P P +
Sbjct: 4391 ----TGPTGAATQGPYLLDTSTMPYLTETPLAVTPDFMQSEKTTLISKGPKDVSWTSPPS 4446
Query: 1581 VIENK---SLSDTLVSTTAPSGIVNVSVKQQTSPKSSQNHLFPGDLKTDEGIYLQVKSLT 1637
V E SL+ LV TT P + + +SP S+ + L G +KT + + ++ +T
Sbjct: 4447 VAETSYPSSLTPFLV-TTIPPATSTLQGQHTSSPVSATSVLTSGLVKTTDMLNTSMEPVT 4505
Query: 1638 AASVDGAYSTQGCMCSVVPTL---------------CSSSDNATLTHYVRPINAEP-VFQ 1681
+ + + + ++ T ++ +A + H P+++EP
Sbjct: 4506 NSPQNLNNPSNEILATLAATTDIETIHPSINKAVTNMGTASSAHVLHSTLPVSSEPSTAT 4565
Query: 1682 AQEIPAGRMASLLKNGEPEAELHKETTGPGTAGPQSNTTSSLKGERKAIHTLQDV-STCE 1740
+ +PA M L + G T + TSSL RK TLQ++ ST E
Sbjct: 4566 SPMVPASSMGDALAS--------ISIPGSETTDIEGEPTSSLTAGRKENSTLQEMNSTTE 4617
Query: 1741 TKELL-NVGVSSL 1752
+ +L NV V ++
Sbjct: 4618 SNIILSNVSVGAI 4630
Score = 31.6 bits (70), Expect = 9.9
Identities = 65/267 (24%), Positives = 105/267 (39%), Gaps = 35/267 (13%)
Query: 1095 PVSTSENARTQGLRDIPSLVVAGQKGTKYLCASSVGGETLDKAVCSLQKETPLPV---SL 1151
P STSE+ T PSLV+ T+ L S + + + + + + LPV S
Sbjct: 7333 PGSTSESTFTLDTSTTPSLVITHSTMTQRLPHSEI-TTLVSRGAGDVPRPSSLPVEETSP 7391
Query: 1152 PSDKTMVMEALSLAKSSSHLSPSEEVRCTQDFLSQTQSLLGLSSEGLLELTQVEVDSSSA 1211
PS + + +S + SS L S S + S+ L + G ++ T+V +D+S+
Sbjct: 7392 PSSQLSLSAMISPSPVSSTLPASSH--------SSSASVTSLLTPGQVKTTEV-LDASAE 7442
Query: 1212 STTLGRQCSLNCISSGCHTSGDSLELRKNHKNGPNTENMNLEAFDSVFIKQTSLSVSREV 1271
T SS S S+E+ + +TE + F + + + S S
Sbjct: 7443 PET----------SSPPSLSSTSVEILATSEVTTDTE--KIHPFSNTAVTKVGTSSSGHE 7490
Query: 1272 SLELSEEDSDIDLA------LTISPPTSPREEMPA-GEIEQFEEAPFSNLELQDVAEEIG 1324
S DS+ A ++I TS PA + + P S+L + E
Sbjct: 7491 SPSSVLPDSETTKATSAMGTISIMGDTSVSTLTPALSNTRKIQSEPASSLTTR--LRETS 7548
Query: 1325 EPEEVAL-TESREVSSADNVSVYPSVS 1350
EE +L TE+ V S + VS
Sbjct: 7549 TSEETSLATEANTVLSKVSTGATTEVS 7575
>gi|32483416 neurofilament, heavy polypeptide 200kDa [Homo sapiens]
Length = 1020
Score = 45.1 bits (105), Expect = 9e-04
Identities = 106/481 (22%), Positives = 170/481 (35%), Gaps = 97/481 (20%)
Query: 304 TPDPEFLVSEAEVRKETETKKDSEEMLKAKKRVFPLSPASNLRVQPKRKASMPHMVQSKK 363
+P+ E S AEV+ + K ++E K+ + K +A P V+S
Sbjct: 532 SPEKEEAKSPAEVKSPEKAKSPAKEEAKSPPEA---------KSPEKEEAKSPAEVKS-- 580
Query: 364 VNLCRPFPKRTASRADNSSDSPTTLKLVKGQFPQKRKRGAEVLTAQFVQKTKLDRKNQEA 423
P++ S A + SP K P+K K + A+ + K K +EA
Sbjct: 581 -------PEKAKSPAKEEAKSPAEAKS-----PEKAKSPVKE-EAKSPAEAKSPVK-EEA 626
Query: 424 PISKDVPVPTNAKRARKQE-KSPVKTVPRAKPPVK---KSPQKQRVNIVKGNENPRNRKQ 479
+V P AK K+E KSP K AK P K KSP+K + + ++P K
Sbjct: 627 KSPAEVKSPEKAKSPTKEEAKSPEK----AKSPEKEEAKSPEKAKSPVKAEAKSPEKAK- 681
Query: 480 LQPVKGETASKLQSEISRGCQEDGISINSVQPENTTAAHNDLPENSIVNYDSQALNMLAD 539
PVK E S PE + P +A + + +
Sbjct: 682 -SPVKAEAKS---------------------PEKAKS-----PVKEEAKSPEKAKSPVKE 714
Query: 540 LALSSATSSTPVSEARNLHCSSELPQNDVLLSKENSLRGTSDHEYHRGVKTQKGELLPNP 599
A S + +PV E ++ P + S E + +K + L
Sbjct: 715 EAKSPEKAKSPVKEEAKTPEKAKSPVKEEAKSPE------------KAKSPEKAKTLDVK 762
Query: 600 SSDRKSNSGSDLTVSQDEESLVPCSQAPAKAQSALTEEM---------LESSDASQSSSV 650
S + K+ + EE+ P + P KA+S + EE+ L+ + +
Sbjct: 763 SPEAKTPA--------KEEARSPADKFPEKAKSPVKEEVKSPEKAKSPLKEDAKAPEKEI 814
Query: 651 SVEHSYALLLTEHSKKHLQEREILSPLFPRNGTKSPEAATPVGKVMPFRHQPGLLLQQKP 710
+ + E K QE ++ P P+ + ATP K + +K
Sbjct: 815 PKKEEVKSPVKEEEKP--QEVKVKEP--PKKAEEEKAPATP--KTEEKKDSKKEEAPKKE 868
Query: 711 PDDPVVKPKDRPPSARVKKSSCSRIVLSCDDSVKITFKCETEYAFSLDSKYTNNPLEKTV 770
P V+ K P + K+S +D K+ E E ++ K P EKT
Sbjct: 869 APKPKVEEKKEPAVEKPKESKVEAKKEEAEDKKKVPTP-EKEAPAKVEVKEDAKPKEKTE 927
Query: 771 V 771
V
Sbjct: 928 V 928
Score = 39.3 bits (90), Expect = 0.048
Identities = 75/369 (20%), Positives = 136/369 (36%), Gaps = 49/369 (13%)
Query: 392 KGQFPQKRKRGAEVLTAQFVQKTKLDRKNQEAPISKDVPVPTNAKRARKQE--------- 442
+G ++ + G E + ++ K ++P+ ++ P AK K+E
Sbjct: 487 EGGEEEEAEGGEEETKSPPAEEAASPEKEAKSPVKEEAKSPAEAKSPEKEEAKSPAEVKS 546
Query: 443 ----KSPVK----TVPRAKPPVK---KSPQKQRVNIVKGNENPRNRKQLQPVKGETASKL 491
KSP K + P AK P K KSP + V + ++P + P + ++ K
Sbjct: 547 PEKAKSPAKEEAKSPPEAKSPEKEEAKSPAE--VKSPEKAKSPAKEEAKSPAEAKSPEKA 604
Query: 492 QSEISRGCQEDGISINSVQPENTTAAHNDLPENSIVNYDSQALNMLADLALSSATSSTPV 551
+S + + + + V+ E + A PE +A + + A S + +P
Sbjct: 605 KSPVKEEAKSPAEAKSPVKEEAKSPAEVKSPE--------KAKSPTKEEAKSPEKAKSPE 656
Query: 552 SEARNLHCSSELPQNDVLLSKENSLRGTSDHEYHRGVKTQKGELLPNPSSDRKSNSGSDL 611
E ++ P S E + + + K + S K+ S
Sbjct: 657 KEEAKSPEKAKSPVKAEAKSPEKAKSPVKAEA--KSPEKAKSPVKEEAKSPEKAKSPVKE 714
Query: 612 TVSQDEESLVPC---SQAPAKAQSALTEEMLESSDASQSSSVSVEHSYALLLTEHSKKHL 668
E++ P ++ P KA+S + EE S + S E + L + K
Sbjct: 715 EAKSPEKAKSPVKEEAKTPEKAKSPVKEEA-----KSPEKAKSPEKAKTLDVKSPEAKTP 769
Query: 669 QEREILSPL--FPRNGTKSP---EAATPVGKVMPFRHQPGLLLQQKPPDDPV---VKPKD 720
+ E SP FP KSP E +P P + ++ P + V VK ++
Sbjct: 770 AKEEARSPADKFPEK-AKSPVKEEVKSPEKAKSPLKEDAKAPEKEIPKKEEVKSPVKEEE 828
Query: 721 RPPSARVKK 729
+P +VK+
Sbjct: 829 KPQEVKVKE 837
Score = 38.9 bits (89), Expect = 0.062
Identities = 40/180 (22%), Positives = 71/180 (39%), Gaps = 21/180 (11%)
Query: 315 EVRKETETKKDSEEMLKAKKRVFPLSPASNLRVQPKRKASM------PHMVQSKKVNLCR 368
EV+ + K +E KA ++ P V+ + K P + +K
Sbjct: 792 EVKSPEKAKSPLKEDAKAPEKEIPKKEEVKSPVKEEEKPQEVKVKEPPKKAEEEKA---- 847
Query: 369 PFPKRTASRADNSSDSPTTLKLVKGQFPQKRKRGAEVLTAQFVQKTKLDRKNQEAPISKD 428
P +T + D+ + + K + +K++ E +++K++ K +EA K
Sbjct: 848 PATPKTEEKKDSKKEEAPKKEAPKPKVEEKKEPAVEK-----PKESKVEAKKEEAEDKKK 902
Query: 429 VPVPTNAKRARKQEKSPVKTVPRAKPPV-KKSPQKQRVNIVKGNENPRNRKQLQPVKGET 487
VP P A+ + K K P+ K V KK P + K P +K+ P K +T
Sbjct: 903 VPTPEKEAPAKVEVKEDAK--PKEKTEVAKKEPDDAK---AKEPSKPAEKKEAAPEKKDT 957
>gi|56550039 myeloid/lymphoid or mixed-lineage leukemia protein [Homo
sapiens]
Length = 3969
Score = 44.3 bits (103), Expect = 0.001
Identities = 50/210 (23%), Positives = 82/210 (39%), Gaps = 24/210 (11%)
Query: 311 VSEAEVRKETETKKDSEEMLKAKKRV-FPLSPASNLRVQPKRKASM-------PHMVQSK 362
V + E + +T KKDS+E K V P + R P K S P +S+
Sbjct: 1213 VKKKEKKSKTSEKKDSKESSVVKNVVDSSQKPTPSAREDPAPKKSSSEPPPRKPVEEKSE 1272
Query: 363 KVNLCRPFPKRT-----ASRADNSSDSPTTLKLVKGQFPQKRKRGAEVLTAQFVQKTKLD 417
+ N+ P P+ ASR + S L + PQ G + + T +
Sbjct: 1273 EGNVSAPGPESKQATTPASRKSSKQVSQPALVIP----PQPPTTGPP--RKEVPKTTPSE 1326
Query: 418 RKNQEAPISKDVPVPTNAKRARKQEKSPVKTVPRAK---PPVKKSPQKQRVNIVKGNENP 474
K ++ P + P + K+ + PVK P+ K PPV K +NI+ N
Sbjct: 1327 PKKKQPPPPESGPEQSKQKKVAPRPSIPVKQKPKEKEKPPPVNKQENAGTLNILSTLSNG 1386
Query: 475 RNRKQLQPVKGETASKLQSEISRGCQEDGI 504
+ KQ P G +++ + C+ + +
Sbjct: 1387 NSSKQKIPADG--VHRIRVDFKEDCEAENV 1414
>gi|197276600 microtubule-associated protein 4 isoform 4 [Homo
sapiens]
Length = 1135
Score = 41.6 bits (96), Expect = 0.010
Identities = 82/381 (21%), Positives = 137/381 (35%), Gaps = 41/381 (10%)
Query: 1258 VFIKQTSLSVSREVSLE-------LSEEDSDIDLALTISPPTSPREEMPAGEIEQFEEAP 1310
V IK L EV+L +E D LT++ +P +++P + P
Sbjct: 529 VLIKNVCLPPEMEVALTEDQVPALKTEAPLAKDGVLTLANNVTPAKDVPPLSETEATPVP 588
Query: 1311 FSNLELQDVAEEIGEPEEVALTESREVSSADNVSVYPSV------------SEEPVENK- 1357
++E+ + I E + + S+A + P E+ V K
Sbjct: 589 IKDMEIAQTQKGISEDSHLESLQDVGQSAAPTFMISPETVTGTGKKCSLPAEEDSVLEKL 648
Query: 1358 -ERKGDNLQPVTLILSKENCTLEIAEEINVTSDFPFDSVIEEVSPASSPEPPVPVKETRP 1416
ERK N QP L S E + EE + + +P + PP P K+T+P
Sbjct: 649 GERKPCNSQPSEL--SSETSGIARPEEGRPVVSGTGNDI---TTPPNKELPPSPEKKTKP 703
Query: 1417 YQAVTPCILKLHGTQCEKSNQISQCESEDLGITEKENVFVGPTHPVGQDNFTQVQQMQVS 1476
P + + ++ Q +G K+ + + G ++ V+
Sbjct: 704 LATTQPAKTSTSKAKTQPTSLPKQPAPTTIGGLNKKPMSLAS----GLVPAAPPKRPAVA 759
Query: 1477 AEMPLILTDHPGRTGRPTLPGKVTEEIVSSEHDEG--LSFSGKVQCYGRELNQPASAAKC 1534
+ P IL + +P K E+ S S SG A+A
Sbjct: 760 SARPSILPSKDVKP-KPIADAKAPEKRASPSKPASAPASRSGSKSTQTVAKTTTAAAVAS 818
Query: 1535 TGDFSPSPEKLVKSGNPLQPVSI--ENRNLDLKHLVLESSEPPFG-PRNVIENKSLSDTL 1591
TG S SP L+ P +P +I E + ++K + +S P++ + T
Sbjct: 819 TGPSSRSPSTLL----PKKPTAIKTEGKPAEVKKMTAKSVPADLSRPKSTSTSSMKKTTT 874
Query: 1592 VSTTAP-SGIVNVSVKQQTSP 1611
+S TAP +G+V VK P
Sbjct: 875 LSGTAPAAGVVPSRVKATPMP 895
Score = 34.7 bits (78), Expect = 1.2
Identities = 62/292 (21%), Positives = 111/292 (38%), Gaps = 43/292 (14%)
Query: 1064 IQTEGVNTADERTTFKKELIKQVSPAASLRHPVSTSENARTQGLRDIPSLVVAGQKGTKY 1123
+ E V + T EL K++ A+ R P E + + + +A K T+
Sbjct: 204 VSPEAVAEPPQPTAVPLELAKEIEMASEERPPAQALEI-----MMGLKTTDMAPSKETEM 258
Query: 1124 LCASSVGGETLDKAVCSLQKETP--LPVSLPSDKTMVMEALSLAKSSSHLSPSEEVRCTQ 1181
A + T + + E+P L V+L D ME+ L +EV +
Sbjct: 259 ALAKDMALATKTEVALAKDMESPTKLDVTLAKDMQPSMESDMALVKDMELPTEKEVALVK 318
Query: 1182 DFLSQTQSLLGLSSEGLLELTQVEVDSSSASTTLGRQCSLNCISSGCHTSGDSLELRKNH 1241
D T++ + S++ ++ T+ EV + + TL ++ S ++L +
Sbjct: 319 DVRWPTETDVS-SAKNVVLPTETEV-APAKDVTLLKETE--------RASPIKMDLAPSK 368
Query: 1242 KNGPNTENMNLEAFDSVFIKQTSLSVSREVSLELSEEDSDIDLALTISPPTSPREE---M 1298
GP EN K+T E S I + L S P +E +
Sbjct: 369 DMGPPKENK----------KET-------------ERASPIKMDLAPSKDMGPPKENKIV 405
Query: 1299 PAGEIEQFEEAPFSNLELQDVAEEIGEPEEVALTESREVSSADNVSVYPSVS 1350
PA ++ E + + EI E+VAL+ EV+ A ++++ P +
Sbjct: 406 PAKDLVLLSEIEVAQANDIISSTEISSAEKVALSSETEVALARDMTLPPETN 457
>gi|47519639 microtubule-associated protein 4 isoform 1 [Homo sapiens]
Length = 1152
Score = 41.6 bits (96), Expect = 0.010
Identities = 82/381 (21%), Positives = 137/381 (35%), Gaps = 41/381 (10%)
Query: 1258 VFIKQTSLSVSREVSLE-------LSEEDSDIDLALTISPPTSPREEMPAGEIEQFEEAP 1310
V IK L EV+L +E D LT++ +P +++P + P
Sbjct: 529 VLIKNVCLPPEMEVALTEDQVPALKTEAPLAKDGVLTLANNVTPAKDVPPLSETEATPVP 588
Query: 1311 FSNLELQDVAEEIGEPEEVALTESREVSSADNVSVYPSV------------SEEPVENK- 1357
++E+ + I E + + S+A + P E+ V K
Sbjct: 589 IKDMEIAQTQKGISEDSHLESLQDVGQSAAPTFMISPETVTGTGKKCSLPAEEDSVLEKL 648
Query: 1358 -ERKGDNLQPVTLILSKENCTLEIAEEINVTSDFPFDSVIEEVSPASSPEPPVPVKETRP 1416
ERK N QP L S E + EE + + +P + PP P K+T+P
Sbjct: 649 GERKPCNSQPSEL--SSETSGIARPEEGRPVVSGTGNDI---TTPPNKELPPSPEKKTKP 703
Query: 1417 YQAVTPCILKLHGTQCEKSNQISQCESEDLGITEKENVFVGPTHPVGQDNFTQVQQMQVS 1476
P + + ++ Q +G K+ + + G ++ V+
Sbjct: 704 LATTQPAKTSTSKAKTQPTSLPKQPAPTTIGGLNKKPMSLAS----GLVPAAPPKRPAVA 759
Query: 1477 AEMPLILTDHPGRTGRPTLPGKVTEEIVSSEHDEG--LSFSGKVQCYGRELNQPASAAKC 1534
+ P IL + +P K E+ S S SG A+A
Sbjct: 760 SARPSILPSKDVKP-KPIADAKAPEKRASPSKPASAPASRSGSKSTQTVAKTTTAAAVAS 818
Query: 1535 TGDFSPSPEKLVKSGNPLQPVSI--ENRNLDLKHLVLESSEPPFG-PRNVIENKSLSDTL 1591
TG S SP L+ P +P +I E + ++K + +S P++ + T
Sbjct: 819 TGPSSRSPSTLL----PKKPTAIKTEGKPAEVKKMTAKSVPADLSRPKSTSTSSMKKTTT 874
Query: 1592 VSTTAP-SGIVNVSVKQQTSP 1611
+S TAP +G+V VK P
Sbjct: 875 LSGTAPAAGVVPSRVKATPMP 895
Score = 34.7 bits (78), Expect = 1.2
Identities = 62/292 (21%), Positives = 111/292 (38%), Gaps = 43/292 (14%)
Query: 1064 IQTEGVNTADERTTFKKELIKQVSPAASLRHPVSTSENARTQGLRDIPSLVVAGQKGTKY 1123
+ E V + T EL K++ A+ R P E + + + +A K T+
Sbjct: 204 VSPEAVAEPPQPTAVPLELAKEIEMASEERPPAQALEI-----MMGLKTTDMAPSKETEM 258
Query: 1124 LCASSVGGETLDKAVCSLQKETP--LPVSLPSDKTMVMEALSLAKSSSHLSPSEEVRCTQ 1181
A + T + + E+P L V+L D ME+ L +EV +
Sbjct: 259 ALAKDMALATKTEVALAKDMESPTKLDVTLAKDMQPSMESDMALVKDMELPTEKEVALVK 318
Query: 1182 DFLSQTQSLLGLSSEGLLELTQVEVDSSSASTTLGRQCSLNCISSGCHTSGDSLELRKNH 1241
D T++ + S++ ++ T+ EV + + TL ++ S ++L +
Sbjct: 319 DVRWPTETDVS-SAKNVVLPTETEV-APAKDVTLLKETE--------RASPIKMDLAPSK 368
Query: 1242 KNGPNTENMNLEAFDSVFIKQTSLSVSREVSLELSEEDSDIDLALTISPPTSPREE---M 1298
GP EN K+T E S I + L S P +E +
Sbjct: 369 DMGPPKENK----------KET-------------ERASPIKMDLAPSKDMGPPKENKIV 405
Query: 1299 PAGEIEQFEEAPFSNLELQDVAEEIGEPEEVALTESREVSSADNVSVYPSVS 1350
PA ++ E + + EI E+VAL+ EV+ A ++++ P +
Sbjct: 406 PAKDLVLLSEIEVAQANDIISSTEISSAEKVALSSETEVALARDMTLPPETN 457
>gi|122937492 SET domain containing 5 [Homo sapiens]
Length = 1442
Score = 40.8 bits (94), Expect = 0.016
Identities = 67/286 (23%), Positives = 116/286 (40%), Gaps = 55/286 (19%)
Query: 447 KTVPRAKPPVKKSPQ-KQRVNIVKGNENPRNRKQLQPVKGETASKLQSEISRGCQEDGIS 505
K VP+ P P+ K R++ + + R ++Q Q A+ Q+E+S+ E+G S
Sbjct: 600 KLVPKPPPAKPSRPRPKSRISRYRTSSAQRLKRQKQ------ANAQQAELSQAALEEGGS 653
Query: 506 INSVQPENTTAAHNDLPENSIVNYDSQALNMLADLALSSATSSTPVSE-----------A 554
+ V P + + + D +++ ++ A S P ++ A
Sbjct: 654 NSLVTPTEAGSLDSSGENRPLTGSDPTVVSITGS-HVNRAASKYPKTKKYLVTEWLNDKA 712
Query: 555 RNLHCSSELPQN-----DVLLSKENSLRG---------TSDHEYHRGV----KTQKGELL 596
C E P VL + N L G T H G + ++ LL
Sbjct: 713 EKQECPVECPLRITTDPTVLATTLNMLPGLIHSPLICTTPKHYIRFGSPFIPERRRRPLL 772
Query: 597 PNPSSDRKSNSGSDLTVSQD-EESLVPCSQAPAKAQSALTEEMLESSDASQSSSVSVEHS 655
P D +S + Q EE + S P Q T+ + +S++ S SSS+ +++
Sbjct: 773 P----DGTFSSCKKRWIKQALEEGMTQTSSVP---QETRTQHLYQSNENSSSSSICKDNA 825
Query: 656 YALL-LTEHSKKHLQEREI------LSPLFP---RNGTKSPEAATP 691
L L + ++L E+ + LSP+ P +G+KSP+ ATP
Sbjct: 826 DLLSPLKKWKSRYLMEQNVTKLLRPLSPVTPPPPNSGSKSPQLATP 871
>gi|247301334 non-protein coding RNA 153 isoform 3 [Homo sapiens]
Length = 540
Score = 40.0 bits (92), Expect = 0.028
Identities = 51/196 (26%), Positives = 75/196 (38%), Gaps = 21/196 (10%)
Query: 509 VQPENTTAAHNDLPENSIVNYDSQALNM----LADLALSSATSSTPVSEARNLHCSSELP 564
+ PEN T DL +S + + L + + S S PVSE +C SE
Sbjct: 149 LSPENRTT---DLKCDSSSGSEGEILTREHIEVEEKRASPPVSPIPVSE----YCESE-- 199
Query: 565 QNDVLLSKENSLRGTSDHEYHRGVKTQKGELLPNPSSDRKSNSGSDLTVSQDEESLVPCS 624
N K + G SDH HR K+QK + ++ SDLT+S E+ L+ S
Sbjct: 200 -NKWSQEKHSPWEGVSDHLAHREPKSQKPFRKMQEEEEESWSTSSDLTISISEDDLILES 258
Query: 625 QAPAKAQSALTE-----EMLESSDASQSSSVSVEHSYALLLTEHSKKHLQEREILSPLFP 679
P E E L+ A Q +L T S +E +P
Sbjct: 259 PEPQPNPGGKMEGEDGIEALKLIHAEQERVALSTEKNCILQTLSSPDSEKESSTNAP--T 316
Query: 680 RNGTKSPEAATPVGKV 695
R ++P++ P +V
Sbjct: 317 REPGQTPDSDVPRAQV 332
>gi|247301318 non-protein coding RNA 153 isoform 2 [Homo sapiens]
Length = 570
Score = 40.0 bits (92), Expect = 0.028
Identities = 51/196 (26%), Positives = 75/196 (38%), Gaps = 21/196 (10%)
Query: 509 VQPENTTAAHNDLPENSIVNYDSQALNM----LADLALSSATSSTPVSEARNLHCSSELP 564
+ PEN T DL +S + + L + + S S PVSE +C SE
Sbjct: 179 LSPENRTT---DLKCDSSSGSEGEILTREHIEVEEKRASPPVSPIPVSE----YCESE-- 229
Query: 565 QNDVLLSKENSLRGTSDHEYHRGVKTQKGELLPNPSSDRKSNSGSDLTVSQDEESLVPCS 624
N K + G SDH HR K+QK + ++ SDLT+S E+ L+ S
Sbjct: 230 -NKWSQEKHSPWEGVSDHLAHREPKSQKPFRKMQEEEEESWSTSSDLTISISEDDLILES 288
Query: 625 QAPAKAQSALTE-----EMLESSDASQSSSVSVEHSYALLLTEHSKKHLQEREILSPLFP 679
P E E L+ A Q +L T S +E +P
Sbjct: 289 PEPQPNPGGKMEGEDGIEALKLIHAEQERVALSTEKNCILQTLSSPDSEKESSTNAP--T 346
Query: 680 RNGTKSPEAATPVGKV 695
R ++P++ P +V
Sbjct: 347 REPGQTPDSDVPRAQV 362
>gi|118150654 non-protein coding RNA 153 isoform 1 [Homo sapiens]
Length = 673
Score = 40.0 bits (92), Expect = 0.028
Identities = 51/196 (26%), Positives = 75/196 (38%), Gaps = 21/196 (10%)
Query: 509 VQPENTTAAHNDLPENSIVNYDSQALNM----LADLALSSATSSTPVSEARNLHCSSELP 564
+ PEN T DL +S + + L + + S S PVSE +C SE
Sbjct: 282 LSPENRTT---DLKCDSSSGSEGEILTREHIEVEEKRASPPVSPIPVSE----YCESE-- 332
Query: 565 QNDVLLSKENSLRGTSDHEYHRGVKTQKGELLPNPSSDRKSNSGSDLTVSQDEESLVPCS 624
N K + G SDH HR K+QK + ++ SDLT+S E+ L+ S
Sbjct: 333 -NKWSQEKHSPWEGVSDHLAHREPKSQKPFRKMQEEEEESWSTSSDLTISISEDDLILES 391
Query: 625 QAPAKAQSALTE-----EMLESSDASQSSSVSVEHSYALLLTEHSKKHLQEREILSPLFP 679
P E E L+ A Q +L T S +E +P
Sbjct: 392 PEPQPNPGGKMEGEDGIEALKLIHAEQERVALSTEKNCILQTLSSPDSEKESSTNAP--T 449
Query: 680 RNGTKSPEAATPVGKV 695
R ++P++ P +V
Sbjct: 450 REPGQTPDSDVPRAQV 465
>gi|149363685 hypothetical protein LOC23379 [Homo sapiens]
Length = 2266
Score = 39.3 bits (90), Expect = 0.048
Identities = 61/271 (22%), Positives = 103/271 (38%), Gaps = 30/271 (11%)
Query: 489 SKLQSEISRGCQEDGISINSVQPENTTAAHNDLPENSIVNYDSQALNMLADLALSSATSS 548
S+ Q E+ GC + S + +T A + P + ++ + D++ S +++
Sbjct: 1451 SQDQGELEAGCIPVTSAEKSPEASHTGPAFQEAPCGNNLSCPQE------DVSSSGQSTN 1504
Query: 549 TPVSEARNLHCSSELPQNDVLLSKENSLR-GTSDHEYHRGVKTQKGELLPNPSSDRKSNS 607
S RN + + + + + SDH Y+ G+ K S
Sbjct: 1505 FDKSRLRNRPVKPSIWISSQIYDQNFETQIVASDHTYYNSKLEPSGKNKNRSKISNKDQS 1564
Query: 608 GSDLTVS-----QDEESLVPCS----QAPAKAQSALTEEMLESSDASQSSSVSVEHSYAL 658
+ S + +S V S +A K Q + T+ +L ++D S + S + +
Sbjct: 1565 NKPVKTSASSRVETHQSEVAQSFSGEKANTKTQRSQTQTILANADTSTPTDCSPDTLSKI 1624
Query: 659 ----------LLTEHSKKHLQEREILSPLFPRNGTKSPEAATPVGKVMPFRHQPGLLLQQ 708
LL + + LSPL + SP A+PVG+V PFR P
Sbjct: 1625 RQEVGPPLPPLLAPLIATPPRTSQPLSPLISSSSPSSP--ASPVGQVSPFRETPVPPAMS 1682
Query: 709 KPPDDP-VVKPKDRPPSARVKKSSCSRIVLS 738
P+DP P D PS +S R+V S
Sbjct: 1683 PWPEDPRRASPPDPSPSPSAASAS-ERVVPS 1712
>gi|239740955 PREDICTED: similar to c114 SLIT-like testicular
protein isoform 1 [Homo sapiens]
Length = 1635
Score = 39.3 bits (90), Expect = 0.048
Identities = 102/532 (19%), Positives = 188/532 (35%), Gaps = 61/532 (11%)
Query: 175 MKVIPILSTLNCA-LLETKKSLPEERIHPNTLVKRHFQELYKADRSPSLSVAPQDRMKDP 233
M P ST N L+T S E + P + K L V+P+ KDP
Sbjct: 95 MPAPPQESTENLVPFLDTWDSAGELPLEPEQFLASQQDLKDKLSPQERLPVSPKKLKKDP 154
Query: 234 TFLGKLPSGFDLIPPAEKCPSESLTQLNSYFSDPSAYILEVSTALDLLAEHPQSPCVSDG 293
L +I S+ T N Y S + Y + L + ++ P P S+
Sbjct: 155 AQRWSLAEIIGIIRQLSTPQSQKQTLQNEYSSTDTPYPGSLPPELRVKSDEPPGP--SEQ 212
Query: 294 ICDAGFSL-VMTPDPEFLVSEAEVRKETETKKDSEEMLKAKKRVFPLSPASNLRVQPKRK 352
+ + F L T +PE L + E ++L+ + P S P
Sbjct: 213 VGPSQFHLEPETQNPETLEDIQSSSLQQEAPAQLPQLLEEE----PSSMQQEAPALPPES 268
Query: 353 ASMPHMVQSKKVNLCRPFPKRTASRADNSSDSPTTLKLVKGQFPQKRKRGAEVLTAQFVQ 412
+ + + +V++ P + N + P +++ +T++
Sbjct: 269 SMESLTLPNHEVSVQPPGEDQAYYHLPNITVKPADVEV--------------TITSEPTN 314
Query: 413 KTKLDRKNQEAPISKDVPVPTNAKRARKQEKSPVK-TVPRAKPPVKKSPQKQRVNIVKGN 471
+T+ + QE PI P + + Q+++P++ VP + + S Q+Q V+ +
Sbjct: 315 ETESSQAQQETPIQ----FPEEVEPSATQQEAPIEPPVPPMEHELSISEQQQP---VQPS 367
Query: 472 ENPRNRKQLQPVKGETASKLQSEISRGCQEDGISINSVQPENTTAAHNDLPENSIVNYDS 531
E+PR E S + + G + + P + H P S+ D
Sbjct: 368 ESPR----------EVESSPTQQETPGQPPEHHEVTVSPPGHHQTHHLASPSVSVKPPDV 417
Query: 532 QALNMLADLALSSATSSTPVSEARNLHCSSELPQNDV-----------LLSKENSLRGTS 580
Q L + A+ + TS L S NDV LL + + G
Sbjct: 418 Q-LTIAAEPSAEVGTSLVHQEATTRLSGSG----NDVEPPAIQHGGPPLLPESSEEAGPL 472
Query: 581 DHEYHRGVKTQKGELLPNPSSDRKSNSGSDLTVSQDEESLVPCSQAPAKAQSALTEEMLE 640
+ ++ + NPS ++ + +++ ES + +APA+ + +
Sbjct: 473 AVQQETSFQSPEPINNENPSPTQQEAAAEHPQTAEEGESSLTHQEAPAQTPEFPNVVVAQ 532
Query: 641 SSDASQSSSVSVEH-SYALLLTEHSKKHLQEREILSPLFPRNGTKSPEAATP 691
+ S + +V+ +T SK ++ LSP T+ P+ P
Sbjct: 533 PPEHSHLTQATVQPLDLGFTITPESKTEVE----LSPTMKETPTQPPKKVVP 580
>gi|239740953 PREDICTED: similar to c114 SLIT-like testicular
protein isoform 2 [Homo sapiens]
Length = 1700
Score = 39.3 bits (90), Expect = 0.048
Identities = 102/532 (19%), Positives = 188/532 (35%), Gaps = 61/532 (11%)
Query: 175 MKVIPILSTLNCA-LLETKKSLPEERIHPNTLVKRHFQELYKADRSPSLSVAPQDRMKDP 233
M P ST N L+T S E + P + K L V+P+ KDP
Sbjct: 95 MPAPPQESTENLVPFLDTWDSAGELPLEPEQFLASQQDLKDKLSPQERLPVSPKKLKKDP 154
Query: 234 TFLGKLPSGFDLIPPAEKCPSESLTQLNSYFSDPSAYILEVSTALDLLAEHPQSPCVSDG 293
L +I S+ T N Y S + Y + L + ++ P P S+
Sbjct: 155 AQRWSLAEIIGIIRQLSTPQSQKQTLQNEYSSTDTPYPGSLPPELRVKSDEPPGP--SEQ 212
Query: 294 ICDAGFSL-VMTPDPEFLVSEAEVRKETETKKDSEEMLKAKKRVFPLSPASNLRVQPKRK 352
+ + F L T +PE L + E ++L+ + P S P
Sbjct: 213 VGPSQFHLEPETQNPETLEDIQSSSLQQEAPAQLPQLLEEE----PSSMQQEAPALPPES 268
Query: 353 ASMPHMVQSKKVNLCRPFPKRTASRADNSSDSPTTLKLVKGQFPQKRKRGAEVLTAQFVQ 412
+ + + +V++ P + N + P +++ +T++
Sbjct: 269 SMESLTLPNHEVSVQPPGEDQAYYHLPNITVKPADVEV--------------TITSEPTN 314
Query: 413 KTKLDRKNQEAPISKDVPVPTNAKRARKQEKSPVK-TVPRAKPPVKKSPQKQRVNIVKGN 471
+T+ + QE PI P + + Q+++P++ VP + + S Q+Q V+ +
Sbjct: 315 ETESSQAQQETPIQ----FPEEVEPSATQQEAPIEPPVPPMEHELSISEQQQP---VQPS 367
Query: 472 ENPRNRKQLQPVKGETASKLQSEISRGCQEDGISINSVQPENTTAAHNDLPENSIVNYDS 531
E+PR E S + + G + + P + H P S+ D
Sbjct: 368 ESPR----------EVESSPTQQETPGQPPEHHEVTVSPPGHHQTHHLASPSVSVKPPDV 417
Query: 532 QALNMLADLALSSATSSTPVSEARNLHCSSELPQNDV-----------LLSKENSLRGTS 580
Q L + A+ + TS L S NDV LL + + G
Sbjct: 418 Q-LTIAAEPSAEVGTSLVHQEATTRLSGSG----NDVEPPAIQHGGPPLLPESSEEAGPL 472
Query: 581 DHEYHRGVKTQKGELLPNPSSDRKSNSGSDLTVSQDEESLVPCSQAPAKAQSALTEEMLE 640
+ ++ + NPS ++ + +++ ES + +APA+ + +
Sbjct: 473 AVQQETSFQSPEPINNENPSPTQQEAAAEHPQTAEEGESSLTHQEAPAQTPEFPNVVVAQ 532
Query: 641 SSDASQSSSVSVEH-SYALLLTEHSKKHLQEREILSPLFPRNGTKSPEAATP 691
+ S + +V+ +T SK ++ LSP T+ P+ P
Sbjct: 533 PPEHSHLTQATVQPLDLGFTITPESKTEVE----LSPTMKETPTQPPKKVVP 580
>gi|210032580 SET domain containing 1B [Homo sapiens]
Length = 1923
Score = 39.3 bits (90), Expect = 0.048
Identities = 36/162 (22%), Positives = 69/162 (42%), Gaps = 15/162 (9%)
Query: 1261 KQTSLSVSREVSLELSEEDSDIDLALTISPPTSPREEMPAGEIEQFEEAPFSNLELQDVA 1320
+ T+LS + E S+E+ + + + + TS E + E E E+ S+ E
Sbjct: 1079 EDTALSEASEKDEGDSDEEETVSIVTSKAEATSSSESSESSEFESSSESSPSSSE----- 1133
Query: 1321 EEIGEPEEVALTESREVSSADNVSVYPSVSEEPVENKERKGDNLQPVTLILSKENCTLEI 1380
+ EEV E E + + S++ E+ E+ G+ + ++ +E
Sbjct: 1134 ----DEEEVVAREEEEEEEEEEMVAEESMASAGPEDFEQDGEEAALAPGAPAVDSLGME- 1188
Query: 1381 AEEINVTSDFPFDSVIEEVSPASSPEPPVPVKETRPYQAVTP 1422
EE+++ ++ +V E P+ EPP+PV P + P
Sbjct: 1189 -EEVDIETE----AVAPEERPSMLDEPPLPVGVEEPADSREP 1225
>gi|104526627 triadin [Homo sapiens]
Length = 729
Score = 39.3 bits (90), Expect = 0.048
Identities = 38/174 (21%), Positives = 66/174 (37%), Gaps = 12/174 (6%)
Query: 313 EAEVRKETETKKDSEEMLKAKKRVFPLSPASNLRVQPKRKASMPHMVQSKKVNLCRPFPK 372
+AE + +ETKK +E +K K + + V+ K P K + +
Sbjct: 318 KAEKKVTSETKKKEKEDIKKKSE-----KETAIDVEKKE----PGKASETKQGTVKIAAQ 368
Query: 373 RTASRADNSSDSPTTLKLVKGQFPQKRKRGAEVLTAQFVQKTKLDRKNQEAPISKDVPVP 432
A + + DS T K + + P+ +K+ + + V+ K +K P K V
Sbjct: 369 AAAKKDEKKEDSKKTKKPAEVEQPKGKKQEKK---EKHVEPAKSPKKEHSVPSDKQVKAK 425
Query: 433 TNAKRARKQEKSPVKTVPRAKPPVKKSPQKQRVNIVKGNENPRNRKQLQPVKGE 486
T + S K VP K +Q + K + K +P+KG+
Sbjct: 426 TERAKEEIGAVSIKKAVPGKKEEKTTKTVEQEIRKEKSGKTSSILKDKEPIKGK 479
Score = 36.2 bits (82), Expect = 0.40
Identities = 50/220 (22%), Positives = 92/220 (41%), Gaps = 17/220 (7%)
Query: 318 KETETKKDSEEMLKAKKRVFPLSPASNLRVQPKRKASMPHMVQSKKVNLCRPFPK--RTA 375
K+ E K+ E K+ K+ + ++ + +R V KK + K +T
Sbjct: 395 KKQEKKEKHVEPAKSPKKEHSVPSDKQVKAKTERAKEEIGAVSIKKAVPGKKEEKTTKTV 454
Query: 376 SRADNSSDSPTTLKLVKGQFPQKRKRGAEVLTAQFVQK---TKLDRKNQEAPISKDVPVP 432
+ S T ++K + P K K E + A +K TK D K +A K+V
Sbjct: 455 EQEIRKEKSGKTSSILKDKEPIKGKE--EKVPASLKEKEPETKKDEKMSKA--GKEVKPK 510
Query: 433 TNAKRARKQEKSPVKTVPRAKPPVKKSPQKQRVNIVK-------GNENPRNRKQLQPVKG 485
+ +K+EK + AKP + + Q + +IVK G + KQ++ V
Sbjct: 511 PPQLQGKKEEKPEPQIKKEAKPAISEKVQIHKQDIVKPEKTVSHGKPEEKVLKQVKAVTI 570
Query: 486 E-TASKLQSEISRGCQEDGISINSVQPENTTAAHNDLPEN 524
E TA ++ + + + SI + +P+ T +++ E+
Sbjct: 571 EKTAKPKPTKKAEHREREPPSIKTDKPKPTPKGTSEVTES 610
>gi|116325993 c114 SLIT-like testicular protein [Homo sapiens]
Length = 1700
Score = 38.9 bits (89), Expect = 0.062
Identities = 62/295 (21%), Positives = 108/295 (36%), Gaps = 15/295 (5%)
Query: 175 MKVIPILSTLNCA-LLETKKSLPEERIHPNTLVKRHFQELYKADRSPSLSVAPQDRMKDP 233
M P ST N L+T S E+ + P + K L V+P+ KDP
Sbjct: 95 MPAPPQESTENLVPFLDTWDSAGEQPLEPEQFLASQQDLKDKLSPQERLPVSPKKLKKDP 154
Query: 234 TFLGKLPSGFDLIPPAEKCPSESLTQLNSYFSDPSAYILEVSTALDLLAEHPQSPCVSDG 293
L + S+ T N Y S + Y + L + ++ P P S+
Sbjct: 155 AQRWSLAEIIGITRQLSTPQSQKQTLQNEYSSTDTPYPGSLPPELRVKSDEPPGP--SEQ 212
Query: 294 ICDAGFSLVM-TPDPEFLVSEAEVRKETETKKDSEEMLKAKKRVFPLSPASNLRVQPKRK 352
+ + F L T +PE L + E ++L+ + P S P
Sbjct: 213 VGPSQFHLEPETQNPETLEDIQSSSLQQEAPAQLPQLLEEE----PSSMQQEAPALPPES 268
Query: 353 ASMPHMVQSKKVNLCRPFPKRTASRADNSSDSPTTLKLVKGQFPQKRKRGAEV---LTAQ 409
+ + + +V++ P + N + P +++ P ++ Q
Sbjct: 269 SMESLTLPNHEVSVQPPGEDQAYYHLPNITVKPADVEVTITSEPTNETESSQAQQETPIQ 328
Query: 410 FVQKTKLDRKNQEAPISKDVPVPTNAKRARKQEKSPVKTVPRAKP-PVKKSPQKQ 463
F ++ + QEAPI VP P + + +++ PV+ P P V+ SP +Q
Sbjct: 329 FPEEVEPSATQQEAPIEPPVP-PMEHELSISEQQQPVQ--PSESPREVESSPTQQ 380
>gi|110665701 leucine rich repeat containing 37A [Homo sapiens]
Length = 1700
Score = 38.9 bits (89), Expect = 0.062
Identities = 62/295 (21%), Positives = 108/295 (36%), Gaps = 15/295 (5%)
Query: 175 MKVIPILSTLNCA-LLETKKSLPEERIHPNTLVKRHFQELYKADRSPSLSVAPQDRMKDP 233
M P ST N L+T S E+ + P + K L V+P+ KDP
Sbjct: 95 MPAPPQESTENLVPFLDTWDSAGEQPLEPEQFLASQQDLKDKLSPQERLPVSPKKLKKDP 154
Query: 234 TFLGKLPSGFDLIPPAEKCPSESLTQLNSYFSDPSAYILEVSTALDLLAEHPQSPCVSDG 293
L + S+ T N Y S + Y + L + ++ P P S+
Sbjct: 155 AQRWSLAEIIGITRQLSTPQSQKQTLQNEYSSTDTPYPGSLPPELRVKSDEPPGP--SEQ 212
Query: 294 ICDAGFSLVM-TPDPEFLVSEAEVRKETETKKDSEEMLKAKKRVFPLSPASNLRVQPKRK 352
+ + F L T +PE L + E ++L+ + P S P
Sbjct: 213 VGPSQFHLEPETQNPETLEDIQSSSLQQEAPAQLPQLLEEE----PSSMQQEAPALPPES 268
Query: 353 ASMPHMVQSKKVNLCRPFPKRTASRADNSSDSPTTLKLVKGQFPQKRKRGAEV---LTAQ 409
+ + + +V++ P + N + P +++ P ++ Q
Sbjct: 269 SMESLTLPNHEVSVQPPGEDQAYYHLPNITVKPADVEVTITSEPTNETESSQAQQETPIQ 328
Query: 410 FVQKTKLDRKNQEAPISKDVPVPTNAKRARKQEKSPVKTVPRAKP-PVKKSPQKQ 463
F ++ + QEAPI VP P + + +++ PV+ P P V+ SP +Q
Sbjct: 329 FPEEVEPSATQQEAPIEPPVP-PMEHELSISEQQQPVQ--PSESPREVESSPTQQ 380
>gi|212549782 caspase 8 associated protein 2 [Homo sapiens]
Length = 1982
Score = 38.5 bits (88), Expect = 0.081
Identities = 59/281 (20%), Positives = 119/281 (42%), Gaps = 39/281 (13%)
Query: 404 EVLTAQFVQKTKLDRKNQEAPISKDVPVPTNAKRARKQEKSPVKTVPRAKPPVKKSPQKQ 463
E + + + ++T +R + D + ++R++ + VK+ + + V + P+
Sbjct: 316 ERINSSWEKETPGERSHSRVDSQSDKKLERQSERSQNINRKEVKSQDKEERKVDQKPK-- 373
Query: 464 RVNIVKGNENPRN--RKQLQPVKGE-----TASKLQSEISRG---CQEDGISINSVQPEN 513
++VK ++ R R L K E +SK E RG C+ D S+NS ++
Sbjct: 374 --SVVKDQDHWRRSERASLPHSKNEITFSHNSSKYHLEERRGWEDCKRDK-SVNSHSFQD 430
Query: 514 ---TTAAHNDLPENSIVNYDSQALNMLADLALSSATSSTP-------VSEARNLHCSSE- 562
++ N +I + + A++ + L + T S+ N H +E
Sbjct: 431 GRCPSSLSNSRTHKNIDSKEVDAMHQWENTPLKAERHRTEDKRKREQESKEENRHIRNEK 490
Query: 563 -LPQNDVLLSKENSLRGTSDHEYHRGVKTQKGELLPNPSSD--------RKSNSGSDLTV 613
+P + + + + + T+D + KT KGE+L N S+ K+ SG + T
Sbjct: 491 RVPTEHLQKTNKETKKTTTDLKKQNEPKTDKGEVLDNGVSEGADNKELAMKAESGPNETK 550
Query: 614 SQDEE----SLVPCSQAPAKAQSALTEEMLESSDASQSSSV 650
++D + + + +PAK Q + + +D +SS V
Sbjct: 551 NKDLKLSFMKKLNLTLSPAKKQPVSQDNQHKITDIPKSSGV 591
>gi|6912288 caspase 8 associated protein 2 [Homo sapiens]
Length = 1982
Score = 38.5 bits (88), Expect = 0.081
Identities = 59/281 (20%), Positives = 119/281 (42%), Gaps = 39/281 (13%)
Query: 404 EVLTAQFVQKTKLDRKNQEAPISKDVPVPTNAKRARKQEKSPVKTVPRAKPPVKKSPQKQ 463
E + + + ++T +R + D + ++R++ + VK+ + + V + P+
Sbjct: 316 ERINSSWEKETPGERSHSRVDSQSDKKLERQSERSQNINRKEVKSQDKEERKVDQKPK-- 373
Query: 464 RVNIVKGNENPRN--RKQLQPVKGE-----TASKLQSEISRG---CQEDGISINSVQPEN 513
++VK ++ R R L K E +SK E RG C+ D S+NS ++
Sbjct: 374 --SVVKDQDHWRRSERASLPHSKNEITFSHNSSKYHLEERRGWEDCKRDK-SVNSHSFQD 430
Query: 514 ---TTAAHNDLPENSIVNYDSQALNMLADLALSSATSSTP-------VSEARNLHCSSE- 562
++ N +I + + A++ + L + T S+ N H +E
Sbjct: 431 GRCPSSLSNSRTHKNIDSKEVDAMHQWENTPLKAERHRTEDKRKREQESKEENRHIRNEK 490
Query: 563 -LPQNDVLLSKENSLRGTSDHEYHRGVKTQKGELLPNPSSD--------RKSNSGSDLTV 613
+P + + + + + T+D + KT KGE+L N S+ K+ SG + T
Sbjct: 491 RVPTEHLQKTNKETKKTTTDLKKQNEPKTDKGEVLDNGVSEGADNKELAMKAESGPNETK 550
Query: 614 SQDEE----SLVPCSQAPAKAQSALTEEMLESSDASQSSSV 650
++D + + + +PAK Q + + +D +SS V
Sbjct: 551 NKDLKLSFMKKLNLTLSPAKKQPVSQDNQHKITDIPKSSGV 591
>gi|212549532 caspase 8 associated protein 2 [Homo sapiens]
Length = 1982
Score = 38.5 bits (88), Expect = 0.081
Identities = 59/281 (20%), Positives = 119/281 (42%), Gaps = 39/281 (13%)
Query: 404 EVLTAQFVQKTKLDRKNQEAPISKDVPVPTNAKRARKQEKSPVKTVPRAKPPVKKSPQKQ 463
E + + + ++T +R + D + ++R++ + VK+ + + V + P+
Sbjct: 316 ERINSSWEKETPGERSHSRVDSQSDKKLERQSERSQNINRKEVKSQDKEERKVDQKPK-- 373
Query: 464 RVNIVKGNENPRN--RKQLQPVKGE-----TASKLQSEISRG---CQEDGISINSVQPEN 513
++VK ++ R R L K E +SK E RG C+ D S+NS ++
Sbjct: 374 --SVVKDQDHWRRSERASLPHSKNEITFSHNSSKYHLEERRGWEDCKRDK-SVNSHSFQD 430
Query: 514 ---TTAAHNDLPENSIVNYDSQALNMLADLALSSATSSTP-------VSEARNLHCSSE- 562
++ N +I + + A++ + L + T S+ N H +E
Sbjct: 431 GRCPSSLSNSRTHKNIDSKEVDAMHQWENTPLKAERHRTEDKRKREQESKEENRHIRNEK 490
Query: 563 -LPQNDVLLSKENSLRGTSDHEYHRGVKTQKGELLPNPSSD--------RKSNSGSDLTV 613
+P + + + + + T+D + KT KGE+L N S+ K+ SG + T
Sbjct: 491 RVPTEHLQKTNKETKKTTTDLKKQNEPKTDKGEVLDNGVSEGADNKELAMKAESGPNETK 550
Query: 614 SQDEE----SLVPCSQAPAKAQSALTEEMLESSDASQSSSV 650
++D + + + +PAK Q + + +D +SS V
Sbjct: 551 NKDLKLSFMKKLNLTLSPAKKQPVSQDNQHKITDIPKSSGV 591
>gi|21536423 amphiphysin isoform 2 [Homo sapiens]
Length = 653
Score = 38.5 bits (88), Expect = 0.081
Identities = 43/158 (27%), Positives = 64/158 (40%), Gaps = 20/158 (12%)
Query: 1257 SVFIKQTSLSVSREVSLELSEEDSDIDLALTISPPTSPREE-------MPAGEIEQFEEA 1309
S+F QT S+ + + ++ D+ + L + +P EE +PAGE EEA
Sbjct: 410 SLFTMQTDQSMICNLIIPGADADAAVG-TLVSAAEGAPGEEAEAEKATVPAGEGVSLEEA 468
Query: 1310 PFSNLELQDVAEEIGEPEEVALTESREVSSADNVSVYPSVSEEPVENKERKGDNLQPVTL 1369
+ E EE+ T +E V PSV EP N E +G+N
Sbjct: 469 KIGTETTEGAESAQPEAEELEATVPQE-------KVIPSVVIEPASNHEEEGEN---EIT 518
Query: 1370 ILSKENCTLEIAEEINVTSDFPFDSVIEEVSPASSPEP 1407
I ++ T E A TS+ P + E P P+P
Sbjct: 519 IGAEPKETTEDAAPPGPTSETP--ELATEQKPIQDPQP 554
>gi|157817073 Cdc2-related kinase, arginine/serine-rich isoform 2
[Homo sapiens]
Length = 1481
Score = 38.5 bits (88), Expect = 0.081
Identities = 39/161 (24%), Positives = 70/161 (43%), Gaps = 17/161 (10%)
Query: 372 KRTASRADNSSDSPTTLKL---VKGQFPQKRKRGAEVLTAQFVQKTKLDRKNQE-APISK 427
KR++SR+ +SS SP L L + + +K+K A A K+D K + +P+
Sbjct: 373 KRSSSRSRHSSISPVRLPLNSSLGAELSRKKKERAAAAAA-----AKMDGKESKGSPVF- 426
Query: 428 DVPVPTNAKRARKQEKSPVKTVPRAKPPVKKSPQKQRVNIVKGNENPRNRKQLQPVKGET 487
+P N+ K K +PR+ K +P + VN+ N +N VK +
Sbjct: 427 -LPRKENSSVEAKDSGLESKKLPRSVKLEKSAPDTELVNVTHLNTEVKNSSDTGKVKLDE 485
Query: 488 ASK------LQSEISRGCQEDGISINSVQPENTTAAHNDLP 522
S+ L+++ +R + + V P+ T + + P
Sbjct: 486 NSEKHLVKDLKAQGTRDSKPIALKEEIVTPKETETSEKETP 526
>gi|157817023 Cdc2-related kinase, arginine/serine-rich isoform 1
[Homo sapiens]
Length = 1490
Score = 38.5 bits (88), Expect = 0.081
Identities = 39/161 (24%), Positives = 70/161 (43%), Gaps = 17/161 (10%)
Query: 372 KRTASRADNSSDSPTTLKL---VKGQFPQKRKRGAEVLTAQFVQKTKLDRKNQE-APISK 427
KR++SR+ +SS SP L L + + +K+K A A K+D K + +P+
Sbjct: 373 KRSSSRSRHSSISPVRLPLNSSLGAELSRKKKERAAAAAA-----AKMDGKESKGSPVF- 426
Query: 428 DVPVPTNAKRARKQEKSPVKTVPRAKPPVKKSPQKQRVNIVKGNENPRNRKQLQPVKGET 487
+P N+ K K +PR+ K +P + VN+ N +N VK +
Sbjct: 427 -LPRKENSSVEAKDSGLESKKLPRSVKLEKSAPDTELVNVTHLNTEVKNSSDTGKVKLDE 485
Query: 488 ASK------LQSEISRGCQEDGISINSVQPENTTAAHNDLP 522
S+ L+++ +R + + V P+ T + + P
Sbjct: 486 NSEKHLVKDLKAQGTRDSKPIALKEEIVTPKETETSEKETP 526
>gi|150170670 piccolo isoform 2 [Homo sapiens]
Length = 4935
Score = 38.5 bits (88), Expect = 0.081
Identities = 79/403 (19%), Positives = 154/403 (38%), Gaps = 57/403 (14%)
Query: 305 PDPEFLVSEAEVRKETETKKDSEEMLKAKKRVFPLSPASNLRVQPKRKASMPHMVQSKKV 364
P+ + L+ E E + E K EE K+ P + ++ P+ K S P + +K
Sbjct: 1215 PEEKKLIPEEEKIRSEEKKPLLEE-----KKPTP----EDKKLLPEAKTSAP---EEQKH 1262
Query: 365 NLCRPFPKRTASRADNSSDSPTTLKLVKGQFPQKRKRGAEVLTAQFVQK-----TKLDRK 419
+L + + + + +P T++ +G+ PQ + G T Q + K TK ++
Sbjct: 1263 DLLKSQVQIAEEKLEGRV-APKTVQ--EGKQPQTKMEGLPSGTPQSLPKEDDKTTKTIKE 1319
Query: 420 NQEAPISK--DVPVPTNAKRARKQEKSPVKTVPRAKPPVKKS------------------ 459
+ P + D P K ++ +KS + + K P S
Sbjct: 1320 QPQPPCTAKPDQVEPGKEKTEKEDDKSDTSSSQQPKSPQGLSDTGYSSDGISSSLGEIPS 1379
Query: 460 --PQKQRVNIVKGNENPRNRKQLQPVKGETASKLQSEISRGCQEDGISINSVQPENTTAA 517
P ++ +I+KG + ++ P +KL+S + + ++ + E T
Sbjct: 1380 LIPTDEK-DILKGLKKDSFSQESSPSSPSDLAKLESTVLSILEAQASTLADEKSEKKTQP 1438
Query: 518 HNDLPENSIVNYDSQALNMLADLALSSATSSTPVSEARNLHCSSELPQNDVLLSKENSLR 577
H PE +Q+L+ ++ +S E ++ Q D+ SK++ +
Sbjct: 1439 HEVSPEQPKDQEKTQSLSETLEITISEEEIKESQEERKDTFKKDS--QQDIPSSKDHKEK 1496
Query: 578 G-------TSDHEYHRGVKTQKGELLPNPSSDRKSNSGSDLTVSQDEESLVPCSQAPAKA 630
T Y ++ + E P P R+++ GS S +E SQ +
Sbjct: 1497 SEFVDDITTRREPYDSVEESSESENSPVPQRKRRTSVGS----SSSDEYKQEDSQGSGEE 1552
Query: 631 QSALTEEMLE-SSDASQSSSVSVEHSYALLLTEHSKKHLQERE 672
+ + ++++E S+D S S E L S Q++E
Sbjct: 1553 EDFIRKQIIEMSADEDASGSEDDEFIRNQLKEISSSTESQKKE 1595
Score = 37.7 bits (86), Expect = 0.14
Identities = 73/343 (21%), Positives = 134/343 (39%), Gaps = 52/343 (15%)
Query: 369 PFPKRTASRADNSSDSPTTLKLVKGQFPQKRKRGAEVLTAQFVQKT----------KLDR 418
P P T S + ++ P +KLVK Q Q+ K AE + + V++T D+
Sbjct: 1136 PMPVPTESSSQKTA-VPPQVKLVKKQ-EQEVKTEAEKVILEKVKETLSMEKIPPMVTTDQ 1193
Query: 419 KNQEAPISKDV--------PVPTNAK------RARKQEKSPVKTVPRAKPPVKKSPQKQR 464
K +E+ + KD P+P K + R +EK P+ + P KK + +
Sbjct: 1194 KQEESKLEKDKASALQEKKPLPEEKKLIPEEEKIRSEEKKPLLEEKKPTPEDKKLLPEAK 1253
Query: 465 VNIVKGNENPRNRKQLQPVKGETASKLQSEISRGCQEDGISINSVQPENTTAAHNDLPEN 524
+ + ++ + Q+Q + KL+ ++ ++G QP+
Sbjct: 1254 TSAPEEQKHDLLKSQVQIAE----EKLEGRVAPKTVQEG-----KQPQTKMEGLPSGTPQ 1304
Query: 525 SIVNYDSQALNMLADLALSSATSSTPVSEARNLHCSSELPQNDVLLSKE-NSLRGTSDHE 583
S+ D + + + T+ E E ++D S++ S +G SD
Sbjct: 1305 SLPKEDDKTTKTIKEQPQPPCTAKPDQVEPGKEKTEKEDDKSDTSSSQQPKSPQGLSDTG 1364
Query: 584 YHR-GVKTQKGELLPNPSSDRKSNSGSDLTVSQDEESLVPCSQAPAKAQSALTEEMLESS 642
Y G+ + GE+ +D K D+ ++S S + + A E + S
Sbjct: 1365 YSSDGISSSLGEIPSLIPTDEK-----DILKGLKKDSFSQESSPSSPSDLAKLESTVLSI 1419
Query: 643 DASQSSSVSVEHSYALLLTEHSKKHLQEREILSPLFPRNGTKS 685
+Q+S+ L E S+K Q E+ SP P++ K+
Sbjct: 1420 LEAQAST---------LADEKSEKKTQPHEV-SPEQPKDQEKT 1452
>gi|150378539 piccolo isoform 1 [Homo sapiens]
Length = 5142
Score = 38.5 bits (88), Expect = 0.081
Identities = 79/403 (19%), Positives = 154/403 (38%), Gaps = 57/403 (14%)
Query: 305 PDPEFLVSEAEVRKETETKKDSEEMLKAKKRVFPLSPASNLRVQPKRKASMPHMVQSKKV 364
P+ + L+ E E + E K EE K+ P + ++ P+ K S P + +K
Sbjct: 1215 PEEKKLIPEEEKIRSEEKKPLLEE-----KKPTP----EDKKLLPEAKTSAP---EEQKH 1262
Query: 365 NLCRPFPKRTASRADNSSDSPTTLKLVKGQFPQKRKRGAEVLTAQFVQK-----TKLDRK 419
+L + + + + +P T++ +G+ PQ + G T Q + K TK ++
Sbjct: 1263 DLLKSQVQIAEEKLEGRV-APKTVQ--EGKQPQTKMEGLPSGTPQSLPKEDDKTTKTIKE 1319
Query: 420 NQEAPISK--DVPVPTNAKRARKQEKSPVKTVPRAKPPVKKS------------------ 459
+ P + D P K ++ +KS + + K P S
Sbjct: 1320 QPQPPCTAKPDQVEPGKEKTEKEDDKSDTSSSQQPKSPQGLSDTGYSSDGISSSLGEIPS 1379
Query: 460 --PQKQRVNIVKGNENPRNRKQLQPVKGETASKLQSEISRGCQEDGISINSVQPENTTAA 517
P ++ +I+KG + ++ P +KL+S + + ++ + E T
Sbjct: 1380 LIPTDEK-DILKGLKKDSFSQESSPSSPSDLAKLESTVLSILEAQASTLADEKSEKKTQP 1438
Query: 518 HNDLPENSIVNYDSQALNMLADLALSSATSSTPVSEARNLHCSSELPQNDVLLSKENSLR 577
H PE +Q+L+ ++ +S E ++ Q D+ SK++ +
Sbjct: 1439 HEVSPEQPKDQEKTQSLSETLEITISEEEIKESQEERKDTFKKDS--QQDIPSSKDHKEK 1496
Query: 578 G-------TSDHEYHRGVKTQKGELLPNPSSDRKSNSGSDLTVSQDEESLVPCSQAPAKA 630
T Y ++ + E P P R+++ GS S +E SQ +
Sbjct: 1497 SEFVDDITTRREPYDSVEESSESENSPVPQRKRRTSVGS----SSSDEYKQEDSQGSGEE 1552
Query: 631 QSALTEEMLE-SSDASQSSSVSVEHSYALLLTEHSKKHLQERE 672
+ + ++++E S+D S S E L S Q++E
Sbjct: 1553 EDFIRKQIIEMSADEDASGSEDDEFIRNQLKEISSSTESQKKE 1595
Score = 37.7 bits (86), Expect = 0.14
Identities = 73/343 (21%), Positives = 134/343 (39%), Gaps = 52/343 (15%)
Query: 369 PFPKRTASRADNSSDSPTTLKLVKGQFPQKRKRGAEVLTAQFVQKT----------KLDR 418
P P T S + ++ P +KLVK Q Q+ K AE + + V++T D+
Sbjct: 1136 PMPVPTESSSQKTA-VPPQVKLVKKQ-EQEVKTEAEKVILEKVKETLSMEKIPPMVTTDQ 1193
Query: 419 KNQEAPISKDV--------PVPTNAK------RARKQEKSPVKTVPRAKPPVKKSPQKQR 464
K +E+ + KD P+P K + R +EK P+ + P KK + +
Sbjct: 1194 KQEESKLEKDKASALQEKKPLPEEKKLIPEEEKIRSEEKKPLLEEKKPTPEDKKLLPEAK 1253
Query: 465 VNIVKGNENPRNRKQLQPVKGETASKLQSEISRGCQEDGISINSVQPENTTAAHNDLPEN 524
+ + ++ + Q+Q + KL+ ++ ++G QP+
Sbjct: 1254 TSAPEEQKHDLLKSQVQIAE----EKLEGRVAPKTVQEG-----KQPQTKMEGLPSGTPQ 1304
Query: 525 SIVNYDSQALNMLADLALSSATSSTPVSEARNLHCSSELPQNDVLLSKE-NSLRGTSDHE 583
S+ D + + + T+ E E ++D S++ S +G SD
Sbjct: 1305 SLPKEDDKTTKTIKEQPQPPCTAKPDQVEPGKEKTEKEDDKSDTSSSQQPKSPQGLSDTG 1364
Query: 584 YHR-GVKTQKGELLPNPSSDRKSNSGSDLTVSQDEESLVPCSQAPAKAQSALTEEMLESS 642
Y G+ + GE+ +D K D+ ++S S + + A E + S
Sbjct: 1365 YSSDGISSSLGEIPSLIPTDEK-----DILKGLKKDSFSQESSPSSPSDLAKLESTVLSI 1419
Query: 643 DASQSSSVSVEHSYALLLTEHSKKHLQEREILSPLFPRNGTKS 685
+Q+S+ L E S+K Q E+ SP P++ K+
Sbjct: 1420 LEAQAST---------LADEKSEKKTQPHEV-SPEQPKDQEKT 1452
>gi|75677612 leucine rich repeat containing 37, member A3 [Homo
sapiens]
Length = 1634
Score = 38.5 bits (88), Expect = 0.081
Identities = 61/294 (20%), Positives = 108/294 (36%), Gaps = 13/294 (4%)
Query: 175 MKVIPILSTLNCA-LLETKKSLPEERIHPNTLVKRHFQELYKADRSPSLSVAPQDRMKDP 233
M P ST N L+T S E + P + K L V+P+ KDP
Sbjct: 95 MPAPPQESTENLVPFLDTWDSAGELPLEPEQFLASQQDLKDKLSPQERLPVSPKKLKKDP 154
Query: 234 TFLGKLPSGFDLIPPAEKCPSESLTQLNSYFSDPSAYILEVSTALDLLAEHPQSPCVSDG 293
L +I S+ T N Y S + Y + L + ++ P P S+
Sbjct: 155 AQRWSLAEIIGIIHQLSTPQSQKQTLQNEYSSTDTPYPGSLPPELRVKSDEPPGP--SEQ 212
Query: 294 ICDAGFSL-VMTPDPEFLVSEAEVRKETETKKDSEEMLKAKKRVFPLSPASNLRVQPKRK 352
+ + F L T +PE L + E ++L+ + P S P
Sbjct: 213 VGPSQFHLEPETQNPETLEDIQSSSLQQEAPAQLPQLLEEE----PSSMQQEAPALPPES 268
Query: 353 ASMPHMVQSKKVNLCRPFPKRTASRADNSSDSPTTLKLVKGQFPQKRKRGAEV---LTAQ 409
+ + + +V++ P + N + P +++ P ++ Q
Sbjct: 269 SMESLTLPNHEVSVQPPGEDQAYYHLPNITVKPADVEVTITSEPTNETESSQAQQETPIQ 328
Query: 410 FVQKTKLDRKNQEAPISKDVPVPTNAKRARKQEKSPVKTVPRAKPPVKKSPQKQ 463
F ++ + QEAPI VP P + + +++ PV+ ++ V+ SP +Q
Sbjct: 329 FPEEVEPSATQQEAPIEPPVP-PMEHELSISEQQQPVQPSESSR-EVESSPTQQ 380
>gi|217416332 trinucleotide repeat containing 6C isoform 1 [Homo
sapiens]
Length = 1726
Score = 38.1 bits (87), Expect = 0.11
Identities = 46/154 (29%), Positives = 67/154 (43%), Gaps = 28/154 (18%)
Query: 915 SYNNEVTGEEAKQESLETSNLVLSGIGSTQTNGPSVPSEEEIVQP----LDSTRVASYSG 970
S +N V GE K + + SN ++G GST PSV S+ VQP ++S A+ SG
Sbjct: 334 STSNGVNGEWGKPPN-QHSNSDINGKGSTGWESPSVTSQNPTVQPGGEHMNSWAKAASSG 392
Query: 971 TV------------TQATFTRTYDGPG---SQPVICQSSVYGTLENKVDILDAAVQTKTG 1015
T + + R G G + +I Q G ++ + LD V + TG
Sbjct: 393 TTASEGSSDGSGNHNEGSTGREGTGEGRRRDKGIIDQ----GHIQLPRNDLDPRVLSNTG 448
Query: 1016 TLQDLIQHGSPINNECHPSLERKDDN----MGCA 1045
Q ++ + E P ERK+DN GCA
Sbjct: 449 WGQTPVKQNTAWEFEESPRSERKNDNGTEAWGCA 482
>gi|33413425 trinucleotide repeat containing 6C isoform 2 [Homo
sapiens]
Length = 1690
Score = 38.1 bits (87), Expect = 0.11
Identities = 46/154 (29%), Positives = 67/154 (43%), Gaps = 28/154 (18%)
Query: 915 SYNNEVTGEEAKQESLETSNLVLSGIGSTQTNGPSVPSEEEIVQP----LDSTRVASYSG 970
S +N V GE K + + SN ++G GST PSV S+ VQP ++S A+ SG
Sbjct: 334 STSNGVNGEWGKPPN-QHSNSDINGKGSTGWESPSVTSQNPTVQPGGEHMNSWAKAASSG 392
Query: 971 TV------------TQATFTRTYDGPG---SQPVICQSSVYGTLENKVDILDAAVQTKTG 1015
T + + R G G + +I Q G ++ + LD V + TG
Sbjct: 393 TTASEGSSDGSGNHNEGSTGREGTGEGRRRDKGIIDQ----GHIQLPRNDLDPRVLSNTG 448
Query: 1016 TLQDLIQHGSPINNECHPSLERKDDN----MGCA 1045
Q ++ + E P ERK+DN GCA
Sbjct: 449 WGQTPVKQNTAWEFEESPRSERKNDNGTEAWGCA 482
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.312 0.129 0.367
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 97,134,023
Number of Sequences: 37866
Number of extensions: 4709209
Number of successful extensions: 13085
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 197
Number of HSP's that attempted gapping in prelim test: 12437
Number of HSP's gapped (non-prelim): 950
length of query: 2430
length of database: 18,247,518
effective HSP length: 119
effective length of query: 2311
effective length of database: 13,741,464
effective search space: 31756523304
effective search space used: 31756523304
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 70 (31.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.