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Search of human proteins with 148747866
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|148747866 heparan sulfate 6-O-sulfotransferase 1 [Homo
sapiens]
(411 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|148747866 heparan sulfate 6-O-sulfotransferase 1 [Homo sapiens] 862 0.0
gi|239756047 PREDICTED: heparan sulfate 6-O-sulfotransferase 3 [... 504 e-143
gi|45580707 heparan sulfate 6-O-sulfotransferase 3 [Homo sapiens] 504 e-143
gi|116295254 heparan sulfate 6-O-sulfotransferase 2 isoform S [H... 501 e-142
gi|116295256 heparan sulfate 6-O-sulfotransferase 2 isoform L [H... 482 e-136
gi|102467235 inner centromere protein antigens 135/155kDa isofor... 35 0.095
gi|102467242 inner centromere protein antigens 135/155kDa isofor... 35 0.095
gi|239745299 PREDICTED: hypothetical protein [Homo sapiens] 35 0.16
gi|224028248 non-POU domain containing, octamer-binding isoform ... 34 0.21
gi|224028246 non-POU domain containing, octamer-binding isoform ... 34 0.21
gi|224028244 non-POU domain containing, octamer-binding isoform ... 34 0.21
gi|34932414 non-POU domain containing, octamer-binding isoform 1... 34 0.21
gi|157743243 phospholipase A2, group IIC [Homo sapiens] 34 0.28
gi|22035606 mitogen-activated protein kinase kinase kinase kinas... 33 0.36
gi|22035602 mitogen-activated protein kinase kinase kinase kinas... 33 0.36
gi|22035604 mitogen-activated protein kinase kinase kinase kinas... 33 0.36
gi|239745089 PREDICTED: golgi autoantigen, golgin subfamily a-li... 33 0.47
gi|216548382 WD repeat domain 47 isoform 3 [Homo sapiens] 33 0.47
gi|216548378 WD repeat domain 47 isoform 1 [Homo sapiens] 33 0.47
gi|216548347 WD repeat domain 47 isoform 2 [Homo sapiens] 33 0.47
gi|239756241 PREDICTED: golgi autoantigen, golgin subfamily a-li... 33 0.61
gi|223634475 golgi autoantigen, golgin subfamily a, 6D [Homo sap... 32 0.80
gi|4501915 ADAM metallopeptidase domain 9 isoform 1 precursor [H... 32 0.80
gi|51472437 PREDICTED: golgi autoantigen, golgin subfamily a, 6C... 32 0.80
gi|4506467 radixin [Homo sapiens] 32 0.80
gi|146133848 golgi autoantigen, golgin subfamily a, 6 [Homo sapi... 32 0.80
gi|90819233 myeloid/lymphoid or mixed-lineage leukemia (trithora... 32 1.0
gi|94538359 golgi autoantigen, golgin subfamily a, 6B [Homo sapi... 32 1.0
gi|56788364 tubulin, gamma complex associated protein 6 [Homo sa... 32 1.0
gi|153791497 ciliary rootlet coiled-coil [Homo sapiens] 32 1.4
>gi|148747866 heparan sulfate 6-O-sulfotransferase 1 [Homo sapiens]
Length = 411
Score = 862 bits (2226), Expect = 0.0
Identities = 411/411 (100%), Positives = 411/411 (100%)
Query: 1 MRRRRAGGRTMVERASKFVLVVAGSVCFMLILYQYAGPGLSLGAPGGRAPPDDLDLFPTP 60
MRRRRAGGRTMVERASKFVLVVAGSVCFMLILYQYAGPGLSLGAPGGRAPPDDLDLFPTP
Sbjct: 1 MRRRRAGGRTMVERASKFVLVVAGSVCFMLILYQYAGPGLSLGAPGGRAPPDDLDLFPTP 60
Query: 61 DPHYEKKYYFPVRELERSLRFDMKGDDVIVFLHIQKTGGTTFGRHLVQNVRLEVPCDCRP 120
DPHYEKKYYFPVRELERSLRFDMKGDDVIVFLHIQKTGGTTFGRHLVQNVRLEVPCDCRP
Sbjct: 61 DPHYEKKYYFPVRELERSLRFDMKGDDVIVFLHIQKTGGTTFGRHLVQNVRLEVPCDCRP 120
Query: 121 GQKKCTCYRPNRRETWLFSRFSTGWSCGLHADWTELTNCVPGVLDRRDSAALRTPRKFYY 180
GQKKCTCYRPNRRETWLFSRFSTGWSCGLHADWTELTNCVPGVLDRRDSAALRTPRKFYY
Sbjct: 121 GQKKCTCYRPNRRETWLFSRFSTGWSCGLHADWTELTNCVPGVLDRRDSAALRTPRKFYY 180
Query: 181 ITLLRDPVSRYLSEWRHVQRGATWKTSLHMCDGRTPTPEELPPCYEGTDWSGCTLQEFMD 240
ITLLRDPVSRYLSEWRHVQRGATWKTSLHMCDGRTPTPEELPPCYEGTDWSGCTLQEFMD
Sbjct: 181 ITLLRDPVSRYLSEWRHVQRGATWKTSLHMCDGRTPTPEELPPCYEGTDWSGCTLQEFMD 240
Query: 241 CPYNLANNRQVRMLADLSLVGCYNLSFIPEGKRAQLLLESAKKNLRGMAFFGLTEFQRKT 300
CPYNLANNRQVRMLADLSLVGCYNLSFIPEGKRAQLLLESAKKNLRGMAFFGLTEFQRKT
Sbjct: 241 CPYNLANNRQVRMLADLSLVGCYNLSFIPEGKRAQLLLESAKKNLRGMAFFGLTEFQRKT 300
Query: 301 QYLFERTFNLKFIRPFMQYNSTRAGGVEVDEDTIRRIEELNDLDMQLYDYAKDLFQQRYQ 360
QYLFERTFNLKFIRPFMQYNSTRAGGVEVDEDTIRRIEELNDLDMQLYDYAKDLFQQRYQ
Sbjct: 301 QYLFERTFNLKFIRPFMQYNSTRAGGVEVDEDTIRRIEELNDLDMQLYDYAKDLFQQRYQ 360
Query: 361 YKRQLERREQRLRSREERLLHRAKEALPREDADEPGRVPTEDYMSHIIEKW 411
YKRQLERREQRLRSREERLLHRAKEALPREDADEPGRVPTEDYMSHIIEKW
Sbjct: 361 YKRQLERREQRLRSREERLLHRAKEALPREDADEPGRVPTEDYMSHIIEKW 411
>gi|239756047 PREDICTED: heparan sulfate 6-O-sulfotransferase 3
[Homo sapiens]
Length = 471
Score = 504 bits (1297), Expect = e-143
Identities = 238/353 (67%), Positives = 286/353 (81%), Gaps = 5/353 (1%)
Query: 62 PHYEKKYYFPVRELERSLRFDMKGDDVIVFLHIQKTGGTTFGRHLVQNVRLEVPCDCRPG 121
P + ++ F +++L R + F++KG DVIVFLHIQKTGGTTFGRHLV+N+RLE PC C+ G
Sbjct: 121 PRFVPRFNFSLKDLTRFVDFNIKGRDVIVFLHIQKTGGTTFGRHLVKNIRLEQPCSCKAG 180
Query: 122 QKKCTCYRPNRRETWLFSRFSTGWSCGLHADWTELTNCVPGVLDRRDSAALRT-PRKFYY 180
QKKCTC+RP ++ETWLFSRFSTGWSCGLHADWTELTNCVP +++++D + R FYY
Sbjct: 181 QKKCTCHRPGKKETWLFSRFSTGWSCGLHADWTELTNCVPAIMEKKDCPRNHSHTRNFYY 240
Query: 181 ITLLRDPVSRYLSEWRHVQRGATWKTSLHMCDGRTPTPEELPPCYEGTDWSGCTLQEFMD 240
IT+LRDPVSRYLSEW+HVQRGATWKTSLHMCDGR+PTP+ELP CY G DWSG +L+EFMD
Sbjct: 241 ITMLRDPVSRYLSEWKHVQRGATWKTSLHMCDGRSPTPDELPTCYPGDDWSGVSLREFMD 300
Query: 241 CPYNLANNRQVRMLADLSLVGCYNLSFIPEGKRAQLLLESAKKNLRGMAFFGLTEFQRKT 300
C YNLANNRQVRMLADLSLVGCYNL+F+ E +R +LL+SAK NL+ MAFFGLTEFQRKT
Sbjct: 301 CTYNLANNRQVRMLADLSLVGCYNLTFMNESERNTILLQSAKNNLKNMAFFGLTEFQRKT 360
Query: 301 QYLFERTFNLKFIRPFMQYNSTRAGGVEVDEDTIRRIEELNDLDMQLYDYAKDLFQQRYQ 360
Q+LFERTFNLKFI PF Q+N TRA VE++E +RIE+LN LDMQLY+YAKDLFQQRY
Sbjct: 361 QFLFERTFNLKFISPFTQFNITRASNVEINEGARQRIEDLNFLDMQLYEYAKDLFQQRYH 420
Query: 361 YKRQLERREQRLRSREERLLHR--AKEALPREDADEPGRVPTEDYMSHIIEKW 411
+ +QLE + R + REER L R P+ED G V TEDY S ++ +W
Sbjct: 421 HTKQLEHQRDRQKRREERRLQREHRDHQWPKEDGAAEGTV-TEDYNSQVV-RW 471
>gi|45580707 heparan sulfate 6-O-sulfotransferase 3 [Homo sapiens]
Length = 471
Score = 504 bits (1297), Expect = e-143
Identities = 238/353 (67%), Positives = 286/353 (81%), Gaps = 5/353 (1%)
Query: 62 PHYEKKYYFPVRELERSLRFDMKGDDVIVFLHIQKTGGTTFGRHLVQNVRLEVPCDCRPG 121
P + ++ F +++L R + F++KG DVIVFLHIQKTGGTTFGRHLV+N+RLE PC C+ G
Sbjct: 121 PRFVPRFNFSLKDLTRFVDFNIKGRDVIVFLHIQKTGGTTFGRHLVKNIRLEQPCSCKAG 180
Query: 122 QKKCTCYRPNRRETWLFSRFSTGWSCGLHADWTELTNCVPGVLDRRDSAALRT-PRKFYY 180
QKKCTC+RP ++ETWLFSRFSTGWSCGLHADWTELTNCVP +++++D + R FYY
Sbjct: 181 QKKCTCHRPGKKETWLFSRFSTGWSCGLHADWTELTNCVPAIMEKKDCPRNHSHTRNFYY 240
Query: 181 ITLLRDPVSRYLSEWRHVQRGATWKTSLHMCDGRTPTPEELPPCYEGTDWSGCTLQEFMD 240
IT+LRDPVSRYLSEW+HVQRGATWKTSLHMCDGR+PTP+ELP CY G DWSG +L+EFMD
Sbjct: 241 ITMLRDPVSRYLSEWKHVQRGATWKTSLHMCDGRSPTPDELPTCYPGDDWSGVSLREFMD 300
Query: 241 CPYNLANNRQVRMLADLSLVGCYNLSFIPEGKRAQLLLESAKKNLRGMAFFGLTEFQRKT 300
C YNLANNRQVRMLADLSLVGCYNL+F+ E +R +LL+SAK NL+ MAFFGLTEFQRKT
Sbjct: 301 CTYNLANNRQVRMLADLSLVGCYNLTFMNESERNTILLQSAKNNLKNMAFFGLTEFQRKT 360
Query: 301 QYLFERTFNLKFIRPFMQYNSTRAGGVEVDEDTIRRIEELNDLDMQLYDYAKDLFQQRYQ 360
Q+LFERTFNLKFI PF Q+N TRA VE++E +RIE+LN LDMQLY+YAKDLFQQRY
Sbjct: 361 QFLFERTFNLKFISPFTQFNITRASNVEINEGARQRIEDLNFLDMQLYEYAKDLFQQRYH 420
Query: 361 YKRQLERREQRLRSREERLLHR--AKEALPREDADEPGRVPTEDYMSHIIEKW 411
+ +QLE + R + REER L R P+ED G V TEDY S ++ +W
Sbjct: 421 HTKQLEHQRDRQKRREERRLQREHRDHQWPKEDGAAEGTV-TEDYNSQVV-RW 471
>gi|116295254 heparan sulfate 6-O-sulfotransferase 2 isoform S [Homo
sapiens]
Length = 605
Score = 501 bits (1291), Expect = e-142
Identities = 242/377 (64%), Positives = 290/377 (76%), Gaps = 14/377 (3%)
Query: 11 MVERASKFVLVVAGSVCFMLILYQYAGPGLSLGAPGGRAPPDDLDLFPTPDPH------- 63
M E+++K +L + F +I+ QY PG +A P PDP+
Sbjct: 147 MDEKSNKLLLALVMLFLFAVIVLQYVCPGTECQLLRLQAFSS-----PVPDPYRSEDESS 201
Query: 64 --YEKKYYFPVRELERSLRFDMKGDDVIVFLHIQKTGGTTFGRHLVQNVRLEVPCDCRPG 121
+ +Y F +L R + FD+KGDD+IVFLHIQKTGGTTFGRHLV+N++LE PC+CR G
Sbjct: 202 ARFVPRYNFTRGDLLRKVDFDIKGDDLIVFLHIQKTGGTTFGRHLVRNIQLEQPCECRVG 261
Query: 122 QKKCTCYRPNRRETWLFSRFSTGWSCGLHADWTELTNCVPGVLDRRDSAALRTPRKFYYI 181
QKKCTC+RP +RETWLFSRFSTGWSCGLHADWTELT+CVP V+D + A LR R F+YI
Sbjct: 262 QKKCTCHRPGKRETWLFSRFSTGWSCGLHADWTELTSCVPSVVDGKRDARLRPSRNFHYI 321
Query: 182 TLLRDPVSRYLSEWRHVQRGATWKTSLHMCDGRTPTPEELPPCYEGTDWSGCTLQEFMDC 241
T+LRDPVSRYLSEWRHVQRGATWK SLH+CDGR PT EELP CY G DWSGC L+EFMDC
Sbjct: 322 TILRDPVSRYLSEWRHVQRGATWKASLHVCDGRPPTSEELPSCYTGDDWSGCPLKEFMDC 381
Query: 242 PYNLANNRQVRMLADLSLVGCYNLSFIPEGKRAQLLLESAKKNLRGMAFFGLTEFQRKTQ 301
PYNLANNRQVRML+DL+LVGCYNLS +PE +R ++LLESAK NL+ MAFFGLTEFQRKTQ
Sbjct: 382 PYNLANNRQVRMLSDLTLVGCYNLSVMPEKQRNKVLLESAKSNLKHMAFFGLTEFQRKTQ 441
Query: 302 YLFERTFNLKFIRPFMQYNSTRAGGVEVDEDTIRRIEELNDLDMQLYDYAKDLFQQRYQY 361
YLFE+TFN+ FI PF QYN+TRA VE++E+ +RIE LN LDM+LY YAKDLF QRYQ+
Sbjct: 442 YLFEKTFNMNFISPFTQYNTTRASSVEINEEIQKRIEGLNFLDMELYSYAKDLFLQRYQF 501
Query: 362 KRQLERREQRLRSREER 378
RQ E +E R + +E+R
Sbjct: 502 MRQKEHQEARRKRQEQR 518
>gi|116295256 heparan sulfate 6-O-sulfotransferase 2 isoform L [Homo
sapiens]
Length = 645
Score = 482 bits (1240), Expect = e-136
Identities = 242/417 (58%), Positives = 290/417 (69%), Gaps = 54/417 (12%)
Query: 11 MVERASKFVLVVAGSVCFMLILYQYAGPGLSLGAPGGRAPPDDLDLFPTPDPH------- 63
M E+++K +L + F +I+ QY PG +A P PDP+
Sbjct: 147 MDEKSNKLLLALVMLFLFAVIVLQYVCPGTECQLLRLQAFSS-----PVPDPYRSEDESS 201
Query: 64 --YEKKYYFPVRELERSLRFDMKGDDVIVFLHIQKTGGTTFGRHLVQNVRLEVPCDCRPG 121
+ +Y F +L R + FD+KGDD+IVFLHIQKTGGTTFGRHLV+N++LE PC+CR G
Sbjct: 202 ARFVPRYNFTRGDLLRKVDFDIKGDDLIVFLHIQKTGGTTFGRHLVRNIQLEQPCECRVG 261
Query: 122 QKKCTCYRPNRRETWLFSRFSTGWSCGLHADWTELTNCVPGVLDRRDSAALRTPR----- 176
QKKCTC+RP +RETWLFSRFSTGWSCGLHADWTELT+CVP V+D + A LR R
Sbjct: 262 QKKCTCHRPGKRETWLFSRFSTGWSCGLHADWTELTSCVPSVVDGKRDARLRPSRWRIFQ 321
Query: 177 -----------------------------------KFYYITLLRDPVSRYLSEWRHVQRG 201
F+YIT+LRDPVSRYLSEWRHVQRG
Sbjct: 322 ILDAASKDKRGSPNTNAGANSPSSTKTRNTSKSGKNFHYITILRDPVSRYLSEWRHVQRG 381
Query: 202 ATWKTSLHMCDGRTPTPEELPPCYEGTDWSGCTLQEFMDCPYNLANNRQVRMLADLSLVG 261
ATWK SLH+CDGR PT EELP CY G DWSGC L+EFMDCPYNLANNRQVRML+DL+LVG
Sbjct: 382 ATWKASLHVCDGRPPTSEELPSCYTGDDWSGCPLKEFMDCPYNLANNRQVRMLSDLTLVG 441
Query: 262 CYNLSFIPEGKRAQLLLESAKKNLRGMAFFGLTEFQRKTQYLFERTFNLKFIRPFMQYNS 321
CYNLS +PE +R ++LLESAK NL+ MAFFGLTEFQRKTQYLFE+TFN+ FI PF QYN+
Sbjct: 442 CYNLSVMPEKQRNKVLLESAKSNLKHMAFFGLTEFQRKTQYLFEKTFNMNFISPFTQYNT 501
Query: 322 TRAGGVEVDEDTIRRIEELNDLDMQLYDYAKDLFQQRYQYKRQLERREQRLRSREER 378
TRA VE++E+ +RIE LN LDM+LY YAKDLF QRYQ+ RQ E +E R + +E+R
Sbjct: 502 TRASSVEINEEIQKRIEGLNFLDMELYSYAKDLFLQRYQFMRQKEHQEARRKRQEQR 558
>gi|102467235 inner centromere protein antigens 135/155kDa isoform 1
[Homo sapiens]
Length = 918
Score = 35.4 bits (80), Expect = 0.095
Identities = 18/57 (31%), Positives = 34/57 (59%)
Query: 335 RRIEELNDLDMQLYDYAKDLFQQRYQYKRQLERREQRLRSREERLLHRAKEALPRED 391
RR +E + + QL + + Q+R Q +R+L+ RE+ LR ++E+L +E +E+
Sbjct: 707 RREQERREQERQLAEQERRREQERLQAERELQEREKALRLQKEQLQRELEEKKKKEE 763
Score = 31.6 bits (70), Expect = 1.4
Identities = 16/35 (45%), Positives = 22/35 (62%)
Query: 351 AKDLFQQRYQYKRQLERREQRLRSREERLLHRAKE 385
AK L +QR Q +R+ ERREQ R +E R R ++
Sbjct: 681 AKRLAEQREQERREQERREQERREQERREQERREQ 715
>gi|102467242 inner centromere protein antigens 135/155kDa isoform 2
[Homo sapiens]
Length = 914
Score = 35.4 bits (80), Expect = 0.095
Identities = 18/57 (31%), Positives = 34/57 (59%)
Query: 335 RRIEELNDLDMQLYDYAKDLFQQRYQYKRQLERREQRLRSREERLLHRAKEALPRED 391
RR +E + + QL + + Q+R Q +R+L+ RE+ LR ++E+L +E +E+
Sbjct: 703 RREQERREQERQLAEQERRREQERLQAERELQEREKALRLQKEQLQRELEEKKKKEE 759
Score = 31.6 bits (70), Expect = 1.4
Identities = 16/35 (45%), Positives = 22/35 (62%)
Query: 351 AKDLFQQRYQYKRQLERREQRLRSREERLLHRAKE 385
AK L +QR Q +R+ ERREQ R +E R R ++
Sbjct: 677 AKRLAEQREQERREQERREQERREQERREQERREQ 711
>gi|239745299 PREDICTED: hypothetical protein [Homo sapiens]
Length = 523
Score = 34.7 bits (78), Expect = 0.16
Identities = 23/87 (26%), Positives = 47/87 (54%), Gaps = 4/87 (4%)
Query: 328 EVDEDTIRRIEELNDLDMQLYDYAKDLFQQRYQYKRQLER---REQRLRSREERLLHRAK 384
E +E + E L + + +L++ + L +Q + + Q ER +E+RLR +EERL + +
Sbjct: 259 EQEERLCEQEERLREQEERLHEQEERLCEQEERLREQEERLCEQEERLREQEERLCEQEE 318
Query: 385 EALPRED-ADEPGRVPTEDYMSHIIEK 410
+E+ E ++P ++ + +EK
Sbjct: 319 RLREQEERLCEQEKLPGQERLLEEVEK 345
Score = 30.0 bits (66), Expect = 4.0
Identities = 20/65 (30%), Positives = 36/65 (55%), Gaps = 4/65 (6%)
Query: 331 EDTIRRIEE-LNDLDMQLYDYAKDLFQQRYQYKRQLER---REQRLRSREERLLHRAKEA 386
E+ +R EE L + + +L + + L +Q + + Q ER +E+RLR EERL + +
Sbjct: 205 EERLREQEERLREQEERLCEQEERLREQEERLREQEERLCEQEERLREHEERLCEQEERL 264
Query: 387 LPRED 391
+E+
Sbjct: 265 CEQEE 269
>gi|224028248 non-POU domain containing, octamer-binding isoform 2
[Homo sapiens]
Length = 382
Score = 34.3 bits (77), Expect = 0.21
Identities = 22/70 (31%), Positives = 36/70 (51%), Gaps = 9/70 (12%)
Query: 331 EDTIRRIEELNDLDMQLYDYAKDLFQQRYQYKRQLE-RREQRLRSREERLLHRAKEALPR 389
+D +RR EEL ++ +L Q Q ++QLE R+E+ R REE + + +E + R
Sbjct: 225 QDLMRRQEELRRME--------ELHNQEVQKRKQLELRQEEERRRREEEMRRQQEEMMRR 276
Query: 390 EDADEPGRVP 399
+ G P
Sbjct: 277 QQEGFKGTFP 286
>gi|224028246 non-POU domain containing, octamer-binding isoform 1
[Homo sapiens]
Length = 471
Score = 34.3 bits (77), Expect = 0.21
Identities = 22/70 (31%), Positives = 36/70 (51%), Gaps = 9/70 (12%)
Query: 331 EDTIRRIEELNDLDMQLYDYAKDLFQQRYQYKRQLE-RREQRLRSREERLLHRAKEALPR 389
+D +RR EEL ++ +L Q Q ++QLE R+E+ R REE + + +E + R
Sbjct: 314 QDLMRRQEELRRME--------ELHNQEVQKRKQLELRQEEERRRREEEMRRQQEEMMRR 365
Query: 390 EDADEPGRVP 399
+ G P
Sbjct: 366 QQEGFKGTFP 375
>gi|224028244 non-POU domain containing, octamer-binding isoform 1
[Homo sapiens]
Length = 471
Score = 34.3 bits (77), Expect = 0.21
Identities = 22/70 (31%), Positives = 36/70 (51%), Gaps = 9/70 (12%)
Query: 331 EDTIRRIEELNDLDMQLYDYAKDLFQQRYQYKRQLE-RREQRLRSREERLLHRAKEALPR 389
+D +RR EEL ++ +L Q Q ++QLE R+E+ R REE + + +E + R
Sbjct: 314 QDLMRRQEELRRME--------ELHNQEVQKRKQLELRQEEERRRREEEMRRQQEEMMRR 365
Query: 390 EDADEPGRVP 399
+ G P
Sbjct: 366 QQEGFKGTFP 375
>gi|34932414 non-POU domain containing, octamer-binding isoform 1
[Homo sapiens]
Length = 471
Score = 34.3 bits (77), Expect = 0.21
Identities = 22/70 (31%), Positives = 36/70 (51%), Gaps = 9/70 (12%)
Query: 331 EDTIRRIEELNDLDMQLYDYAKDLFQQRYQYKRQLE-RREQRLRSREERLLHRAKEALPR 389
+D +RR EEL ++ +L Q Q ++QLE R+E+ R REE + + +E + R
Sbjct: 314 QDLMRRQEELRRME--------ELHNQEVQKRKQLELRQEEERRRREEEMRRQQEEMMRR 365
Query: 390 EDADEPGRVP 399
+ G P
Sbjct: 366 QQEGFKGTFP 375
>gi|157743243 phospholipase A2, group IIC [Homo sapiens]
Length = 150
Score = 33.9 bits (76), Expect = 0.28
Identities = 34/126 (26%), Positives = 46/126 (36%), Gaps = 21/126 (16%)
Query: 33 YQYAGPGLSLGAPGGRAPPDDLDLFPTPDPHYEKKYYFPVRELERSLRFDMKGDDVIVFL 92
+ Y G G G P DD D +P P YEK F + + S +F + V+
Sbjct: 40 FSYYGYGCYCGLGDKGIPVDDTDSPSSPSP-YEKLKEFSCQPVLNSYQFHIVNGAVVC-- 96
Query: 93 HIQKTGGTTFGRHLVQNVRLEVPCDCRPGQKKC-----TCYRPNRRETWLFSRFSTGWSC 147
G T G + RL+ C+C C Y N F +FS+ C
Sbjct: 97 ------GCTLGPGASCHCRLKA-CECDKQSVHCFKESLPTYEKN------FKQFSSQPRC 143
Query: 148 GLHADW 153
G H W
Sbjct: 144 GRHKPW 149
>gi|22035606 mitogen-activated protein kinase kinase kinase kinase 4
isoform 3 [Homo sapiens]
Length = 1212
Score = 33.5 bits (75), Expect = 0.36
Identities = 21/63 (33%), Positives = 32/63 (50%)
Query: 335 RRIEELNDLDMQLYDYAKDLFQQRYQYKRQLERREQRLRSREERLLHRAKEALPREDADE 394
+RIE+ + +L + + + R Q +R+ RREQ + R E L R KE R A+E
Sbjct: 397 KRIEQQKEQRRRLEEQQRREREARRQQEREQRRREQEEKRRLEELERRRKEEEERRRAEE 456
Query: 395 PGR 397
R
Sbjct: 457 EKR 459
>gi|22035602 mitogen-activated protein kinase kinase kinase kinase 4
isoform 1 [Homo sapiens]
Length = 1166
Score = 33.5 bits (75), Expect = 0.36
Identities = 21/63 (33%), Positives = 32/63 (50%)
Query: 335 RRIEELNDLDMQLYDYAKDLFQQRYQYKRQLERREQRLRSREERLLHRAKEALPREDADE 394
+RIE+ + +L + + + R Q +R+ RREQ + R E L R KE R A+E
Sbjct: 397 KRIEQQKEQRRRLEEQQRREREARRQQEREQRRREQEEKRRLEELERRRKEEEERRRAEE 456
Query: 395 PGR 397
R
Sbjct: 457 EKR 459
>gi|22035604 mitogen-activated protein kinase kinase kinase kinase 4
isoform 2 [Homo sapiens]
Length = 1320
Score = 33.5 bits (75), Expect = 0.36
Identities = 21/63 (33%), Positives = 32/63 (50%)
Query: 335 RRIEELNDLDMQLYDYAKDLFQQRYQYKRQLERREQRLRSREERLLHRAKEALPREDADE 394
+RIE+ + +L + + + R Q +R+ RREQ + R E L R KE R A+E
Sbjct: 397 KRIEQQKEQRRRLEEQQRREREARRQQEREQRRREQEEKRRLEELERRRKEEEERRRAEE 456
Query: 395 PGR 397
R
Sbjct: 457 EKR 459
>gi|239745089 PREDICTED: golgi autoantigen, golgin subfamily a-like
[Homo sapiens]
Length = 828
Score = 33.1 bits (74), Expect = 0.47
Identities = 24/102 (23%), Positives = 49/102 (48%), Gaps = 17/102 (16%)
Query: 294 TEFQRKTQYLFERTFNLKFIRPFMQYNSTRAGGVEVDEDTIRRIEELNDLDMQLYDYAKD 353
+E Q + L + KF+ P +Q N+ + E+ R+ EEL + + ++ +
Sbjct: 204 SEIQLNVKELKRKLERAKFLLPQVQTNT-------LQEEMWRQEEELREQEKKIRKQEEK 256
Query: 354 LFQQRYQYKRQ----------LERREQRLRSREERLLHRAKE 385
+++Q + + Q + R+E+RLR +E+ L + KE
Sbjct: 257 MWRQEERLREQEGKMREQEEKMRRQEKRLREQEKELREQEKE 298
Score = 28.9 bits (63), Expect = 8.9
Identities = 19/74 (25%), Positives = 38/74 (51%), Gaps = 3/74 (4%)
Query: 328 EVDEDTIRRIEELNDLDMQLYDYAKDLFQQRYQYKRQLER---REQRLRSREERLLHRAK 384
E +E + E++ + +L++ K + +Q + + Q ER +++RLR +EER+ + K
Sbjct: 321 EQEEKMREQEEKMWRQEERLWEQEKQMREQEQKMRDQEERMWEQDERLREKEERMREQEK 380
Query: 385 EALPREDADEPGRV 398
E E R+
Sbjct: 381 MWEQEEKMQEEERI 394
>gi|216548382 WD repeat domain 47 isoform 3 [Homo sapiens]
Length = 919
Score = 33.1 bits (74), Expect = 0.47
Identities = 20/72 (27%), Positives = 41/72 (56%), Gaps = 7/72 (9%)
Query: 339 ELNDLDMQLYDYAKDLFQQRYQYKRQLERREQRLRSREERLLHRAKEALPREDADEPGRV 398
EL D Q +Y ++QR +Y++ LE++EQ+ + ++ LL + + +ED + +
Sbjct: 418 ELRDSTEQFQEY----YRQRLRYQQHLEQKEQQRQIYQQMLL---EGGVNQEDGPDQQQN 470
Query: 399 PTEDYMSHIIEK 410
TE +++ I+K
Sbjct: 471 LTEQFLNRSIQK 482
>gi|216548378 WD repeat domain 47 isoform 1 [Homo sapiens]
Length = 927
Score = 33.1 bits (74), Expect = 0.47
Identities = 20/72 (27%), Positives = 41/72 (56%), Gaps = 7/72 (9%)
Query: 339 ELNDLDMQLYDYAKDLFQQRYQYKRQLERREQRLRSREERLLHRAKEALPREDADEPGRV 398
EL D Q +Y ++QR +Y++ LE++EQ+ + ++ LL + + +ED + +
Sbjct: 426 ELRDSTEQFQEY----YRQRLRYQQHLEQKEQQRQIYQQMLL---EGGVNQEDGPDQQQN 478
Query: 399 PTEDYMSHIIEK 410
TE +++ I+K
Sbjct: 479 LTEQFLNRSIQK 490
>gi|216548347 WD repeat domain 47 isoform 2 [Homo sapiens]
Length = 920
Score = 33.1 bits (74), Expect = 0.47
Identities = 20/72 (27%), Positives = 41/72 (56%), Gaps = 7/72 (9%)
Query: 339 ELNDLDMQLYDYAKDLFQQRYQYKRQLERREQRLRSREERLLHRAKEALPREDADEPGRV 398
EL D Q +Y ++QR +Y++ LE++EQ+ + ++ LL + + +ED + +
Sbjct: 419 ELRDSTEQFQEY----YRQRLRYQQHLEQKEQQRQIYQQMLL---EGGVNQEDGPDQQQN 471
Query: 399 PTEDYMSHIIEK 410
TE +++ I+K
Sbjct: 472 LTEQFLNRSIQK 483
>gi|239756241 PREDICTED: golgi autoantigen, golgin subfamily a-like
[Homo sapiens]
Length = 899
Score = 32.7 bits (73), Expect = 0.61
Identities = 25/111 (22%), Positives = 53/111 (47%), Gaps = 17/111 (15%)
Query: 294 TEFQRKTQYLFERTFNLKFIRPFMQYNSTRAGGVEVDEDTIRRIEELNDLDMQLYDYAKD 353
+E Q + L + KF+ P +Q N+ + E+ R+ EEL + + ++ +
Sbjct: 242 SEIQLNVKELKRKLERAKFLLPQVQTNT-------LQEEMWRQEEELREQEKKIRKQEEK 294
Query: 354 LFQQRYQYKRQ----------LERREQRLRSREERLLHRAKEALPREDADE 394
+++Q + + Q + R+E+RLR +E+ L + KE +++ E
Sbjct: 295 MWRQEERLREQEGKMREQEEKMWRQEKRLREQEKELREQEKELREQKELRE 345
>gi|223634475 golgi autoantigen, golgin subfamily a, 6D [Homo
sapiens]
Length = 693
Score = 32.3 bits (72), Expect = 0.80
Identities = 20/67 (29%), Positives = 36/67 (53%), Gaps = 3/67 (4%)
Query: 328 EVDEDTIRRIEELNDLDMQLYDYAKDLFQQRYQYKRQ---LERREQRLRSREERLLHRAK 384
E + +R E L + + +L + K L +Q + ++Q L ++E+RLR EERL + K
Sbjct: 348 EQEAQRVREQERLCEQNERLREQQKTLQEQGERLRKQEQRLRKQEERLRKEEERLQKQEK 407
Query: 385 EALPRED 391
+E+
Sbjct: 408 RLWDQEE 414
>gi|4501915 ADAM metallopeptidase domain 9 isoform 1 precursor [Homo
sapiens]
Length = 819
Score = 32.3 bits (72), Expect = 0.80
Identities = 16/33 (48%), Positives = 18/33 (54%), Gaps = 3/33 (9%)
Query: 211 CDGRTPTPEELPPCYEGTDWSGCTLQEFMDCPY 243
CD TP EL PC EG S C L+ F +C Y
Sbjct: 428 CDCGTPKECELDPCCEG---STCKLKSFAECAY 457
>gi|51472437 PREDICTED: golgi autoantigen, golgin subfamily a, 6C
isoform 1 [Homo sapiens]
Length = 693
Score = 32.3 bits (72), Expect = 0.80
Identities = 20/67 (29%), Positives = 36/67 (53%), Gaps = 3/67 (4%)
Query: 328 EVDEDTIRRIEELNDLDMQLYDYAKDLFQQRYQYKRQ---LERREQRLRSREERLLHRAK 384
E + +R E L + + +L + K L +Q + ++Q L ++E+RLR EERL + K
Sbjct: 348 EQEAQRVREQERLCEQNERLREQQKTLQEQGERLRKQEQRLRKQEERLRKEEERLQKQEK 407
Query: 385 EALPRED 391
+E+
Sbjct: 408 RLWDQEE 414
>gi|4506467 radixin [Homo sapiens]
Length = 583
Score = 32.3 bits (72), Expect = 0.80
Identities = 21/67 (31%), Positives = 38/67 (56%), Gaps = 9/67 (13%)
Query: 328 EVDEDTIRRIEELNDLDMQLYDYAKDLFQQRYQYKRQLERREQRLRSREERLLHRAKEAL 387
+++E TI+ +EL + + A +L Q+R + K + ER E+ R+ EE AK A+
Sbjct: 353 QIEEQTIKAQKELEEQTRK----ALELDQERKRAKEEAERLEKERRAAEE-----AKSAI 403
Query: 388 PREDADE 394
++ AD+
Sbjct: 404 AKQAADQ 410
>gi|146133848 golgi autoantigen, golgin subfamily a, 6 [Homo
sapiens]
Length = 693
Score = 32.3 bits (72), Expect = 0.80
Identities = 20/67 (29%), Positives = 36/67 (53%), Gaps = 3/67 (4%)
Query: 328 EVDEDTIRRIEELNDLDMQLYDYAKDLFQQRYQYKRQ---LERREQRLRSREERLLHRAK 384
E + +R E L + + +L + K L +Q + ++Q L ++E+RLR EERL + K
Sbjct: 348 EQEAQRVREQERLCEQNERLREQQKTLQEQGERLRKQEQRLRKQEERLRKEEERLQKQEK 407
Query: 385 EALPRED 391
+E+
Sbjct: 408 RLWDQEE 414
>gi|90819233 myeloid/lymphoid or mixed-lineage leukemia (trithorax
homolog, Drosophila); translocated to, 4 isoform 2 [Homo
sapiens]
Length = 1651
Score = 32.0 bits (71), Expect = 1.0
Identities = 28/109 (25%), Positives = 47/109 (43%), Gaps = 9/109 (8%)
Query: 293 LTEFQRKTQYLFERTFNLKFIRPFMQYNSTRAGGVEVDEDTIRRIEELNDLDMQLYDY-- 350
+ E Q K E + L+ + Q+ + DED EE +D+D L
Sbjct: 1540 IQELQSKPDRSAEESDRLRKLMLEWQFQKRLQESKQKDEDDEE--EEDDDVDTMLIMQRL 1597
Query: 351 -----AKDLFQQRYQYKRQLERREQRLRSREERLLHRAKEALPREDADE 394
A+D ++R Q ++ +RE R+R+E R +E + DA+E
Sbjct: 1598 EAERRARDEERRRQQQLEEMRKREAEDRARQEEERRRQEEERTKRDAEE 1646
>gi|94538359 golgi autoantigen, golgin subfamily a, 6B [Homo
sapiens]
Length = 693
Score = 32.0 bits (71), Expect = 1.0
Identities = 20/67 (29%), Positives = 36/67 (53%), Gaps = 3/67 (4%)
Query: 328 EVDEDTIRRIEELNDLDMQLYDYAKDLFQQRYQYKRQ---LERREQRLRSREERLLHRAK 384
E + +R E L + + +L + K L +Q + ++Q L ++E+RLR EERL + K
Sbjct: 348 EQEVQRVREQERLCEQNERLREQQKTLQEQGERLRKQEQRLRKQEERLRKEEERLQKQEK 407
Query: 385 EALPRED 391
+E+
Sbjct: 408 RLWDQEE 414
>gi|56788364 tubulin, gamma complex associated protein 6 [Homo
sapiens]
Length = 1819
Score = 32.0 bits (71), Expect = 1.0
Identities = 14/29 (48%), Positives = 21/29 (72%)
Query: 359 YQYKRQLERREQRLRSREERLLHRAKEAL 387
+ Y R+L RE+RL+S EE L +A++AL
Sbjct: 732 FSYARELRDRERRLKSLEEELERKARQAL 760
>gi|153791497 ciliary rootlet coiled-coil [Homo sapiens]
Length = 2017
Score = 31.6 bits (70), Expect = 1.4
Identities = 22/73 (30%), Positives = 35/73 (47%)
Query: 338 EELNDLDMQLYDYAKDLFQQRYQYKRQLERREQRLRSREERLLHRAKEALPREDADEPGR 397
E+L L QL ++L Q R + +RQ+E E+ R +E A A+ A+ GR
Sbjct: 834 EQLAQLSRQLSGREQELEQARREAQRQVEALERAAREKEALAKEHAGLAVQLVAAEREGR 893
Query: 398 VPTEDYMSHIIEK 410
+E+ +EK
Sbjct: 894 TLSEEATRLRLEK 906
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.324 0.140 0.444
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 17,725,392
Number of Sequences: 37866
Number of extensions: 870879
Number of successful extensions: 3367
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 51
Number of HSP's that attempted gapping in prelim test: 3153
Number of HSP's gapped (non-prelim): 235
length of query: 411
length of database: 18,247,518
effective HSP length: 105
effective length of query: 306
effective length of database: 14,271,588
effective search space: 4367105928
effective search space used: 4367105928
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.