Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: NONO Sequence: fasta or formatted (382aa) NCBI GI: 224028248
Description:

non-POU domain containing, octamer-binding isoform 2

Referenced in:

Capping and Splicing

Other entries for this name:
alt prot [471aa] non-POU domain containing, octamer-binding isoform 1
alt prot [471aa] non-POU domain containing, octamer-binding isoform 1
alt prot [471aa] non-POU domain containing, octamer-binding isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.4         32           2
 C cysteine            0.5          2           1
 D aspartate           3.4         13           2
 E glutamate          12.3         47           3
 F phenylalanine       4.7         18           1
 G glycine             7.9         30           2
 H histidine           1.6          6           1
 I isoleucine          3.1         12           1
 K lysine              5.5         21           1
 L leucine             6.8         26           2
 M methionine          5.8         22           2
 N asparagine          2.6         10           2
 P proline             7.1         27           2
 Q glutamine           6.8         26           3
 R arginine           11.0         42           4
 S serine              2.4          9           1
 T threonine           3.9         15           2
 V valine              4.7         18           2
 W tryptophan          0.3          1           1
 Y tyrosine            1.3          5           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   non-POU domain containing, octamer-binding isoform ... 
NONO                  1.000   non-POU domain containing, octamer-binding isoform ...
NONO                  1.000   non-POU domain containing, octamer-binding isoform ...
NONO                  1.000   non-POU domain containing, octamer-binding isoform 1...
PSPC1                 0.604   paraspeckle protein 1 
SFPQ                  0.565   splicing factor proline/glutamine rich (polypyrimidin...
LOC100133758          0.066   PREDICTED: hypothetical protein, partial 
TCHH                  0.061   trichohyalin 
LOC645202             0.057   PREDICTED: hypothetical protein LOC645202 
LOC440243             0.057   PREDICTED: Putative golgin subfamily A member 6-lik...
ENAH                  0.055   enabled homolog isoform a 
ENAH                  0.055   enabled homolog isoform b 
LOC283685             0.055   PREDICTED: golgi autoantigen, golgin subfamily a-li...
LOC283767             0.054   golgi autoantigen, golgin subfamily a-like 
LOC727832             0.053   golgi autoantigen, golgin subfamily a-like 
LOC283685             0.051   PREDICTED: golgi autoantigen, golgin subfamily a-li...
MLLT4                 0.049   myeloid/lymphoid or mixed-lineage leukemia (trithora...
GIGYF2                0.047   GRB10 interacting GYF protein 2 isoform c 
GIGYF2                0.047   GRB10 interacting GYF protein 2 isoform a 
GIGYF2                0.047   GRB10 interacting GYF protein 2 isoform b 
GIGYF2                0.047   GRB10 interacting GYF protein 2 isoform b 
LOC100133220          0.047   PREDICTED: hypothetical protein 
LOC400352             0.047   PREDICTED: similar to Putative golgin subfamily A m...
LOC100132816          0.047   PREDICTED: similar to Putative golgin subfamily A m...
PABPC5                0.046   poly(A) binding protein, cytoplasmic 5 
MAP4K4                0.043   mitogen-activated protein kinase kinase kinase kinas...
MAP4K4                0.043   mitogen-activated protein kinase kinase kinase kinas...
ITSN1                 0.042   intersectin 1 isoform ITSN-s 
ITSN1                 0.042   intersectin 1 isoform ITSN-l 
MAP7                  0.040   microtubule-associated protein 7 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press