Guide to the Human Genome
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Name: NONO Sequence: fasta or formatted (471aa) NCBI GI: 224028244
Description:

non-POU domain containing, octamer-binding isoform 1

Referenced in:

Capping and Splicing

Other entries for this name:
alt mRNA [471aa] non-POU domain containing, octamer-binding isoform 1
alt prot [382aa] non-POU domain containing, octamer-binding isoform 2
alt mRNA [471aa] non-POU domain containing, octamer-binding isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.2         34           2
 C cysteine            0.4          2           1
 D aspartate           3.2         15           2
 E glutamate          11.3         53           3
 F phenylalanine       4.7         22           1
 G glycine             7.2         34           2
 H histidine           3.0         14           3
 I isoleucine          3.2         15           1
 K lysine              5.7         27           1
 L leucine             6.6         31           2
 M methionine          4.9         23           2
 N asparagine          3.6         17           2
 P proline             7.9         37           5
 Q glutamine           8.9         42           6
 R arginine            9.8         46           4
 S serine              2.8         13           2
 T threonine           4.5         21           2
 V valine              4.0         19           2
 W tryptophan          0.2          1           1
 Y tyrosine            1.1          5           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   non-POU domain containing, octamer-binding isoform ... 
NONO                  1.000   non-POU domain containing, octamer-binding isoform ...
NONO                  1.000   non-POU domain containing, octamer-binding isoform 1...
NONO                  0.797   non-POU domain containing, octamer-binding isoform ...
PSPC1                 0.554   paraspeckle protein 1 
SFPQ                  0.526   splicing factor proline/glutamine rich (polypyrimidin...
LOC100133758          0.053   PREDICTED: hypothetical protein, partial 
PABPC5                0.050   poly(A) binding protein, cytoplasmic 5 
TCHH                  0.048   trichohyalin 
RAVER1                0.047   RAVER1 
LOC645202             0.045   PREDICTED: hypothetical protein LOC645202 
LOC440243             0.045   PREDICTED: Putative golgin subfamily A member 6-lik...
ENAH                  0.044   enabled homolog isoform a 
ENAH                  0.044   enabled homolog isoform b 
LOC283685             0.044   PREDICTED: golgi autoantigen, golgin subfamily a-li...
LOC283767             0.043   golgi autoantigen, golgin subfamily a-like 
RBM4B                 0.043   RNA binding motif protein 4B 
RBM4                  0.042   RNA binding motif protein 4 
LOC727832             0.042   golgi autoantigen, golgin subfamily a-like 
ELAVL4                0.042   ELAV-like 4 isoform 1 
ELAVL1                0.042   ELAV-like 1 
ELAVL4                0.042   ELAV-like 4 isoform 5 
ELAVL4                0.042   ELAV-like 4 isoform 4 
ELAVL4                0.042   ELAV-like 4 isoform 3 
ELAVL4                0.042   ELAV-like 4 isoform 2 
LOC283685             0.041   PREDICTED: golgi autoantigen, golgin subfamily a-li...
PABPC1                0.041   poly(A) binding protein, cytoplasmic 1 
ELAVL2                0.041   ELAV (embryonic lethal, abnormal vision, Drosophila...
PABPC4L               0.040   poly(A) binding protein, cytoplasmic 4-like 
MLLT4                 0.039   myeloid/lymphoid or mixed-lineage leukemia (trithora...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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