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Search of human proteins with 148747397
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|148747397 deleted in lymphocytic leukemia, 7 [Homo sapiens]
(160 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|148747397 deleted in lymphocytic leukemia, 7 [Homo sapiens] 322 9e-89
gi|239748752 PREDICTED: hypothetical protein XP_002346787 [Homo ... 38 0.003
gi|239754955 PREDICTED: similar to COL22A1 protein [Homo sapiens] 36 0.012
gi|40805823 collagen, type XXII, alpha 1 [Homo sapiens] 36 0.012
gi|239744552 PREDICTED: hypothetical protein [Homo sapiens] 35 0.021
gi|50233789 cancer/testis antigen 2 isoform LAGE-1a [Homo sapiens] 35 0.027
gi|10337609 cancer/testis antigen 2 isoform LAGE-1b [Homo sapiens] 35 0.027
gi|239757038 PREDICTED: hypothetical protein [Homo sapiens] 35 0.027
gi|239751528 PREDICTED: hypothetical protein [Homo sapiens] 35 0.027
gi|239746039 PREDICTED: hypothetical protein XP_002343635 [Homo ... 35 0.027
gi|146198654 zinc finger protein 768 [Homo sapiens] 35 0.027
gi|27545323 chondroitin polymerizing factor [Homo sapiens] 35 0.036
gi|4503119 cancer/testis antigen 1B [Homo sapiens] 34 0.047
gi|224809412 myocyte enhancer factor 2B isoform a [Homo sapiens] 34 0.047
gi|154816198 transcription elongation factor B polypeptide 3C-li... 34 0.047
gi|21281685 cancer/testis antigen 1A [Homo sapiens] 34 0.047
gi|156938279 transcription elongation factor B polypeptide 3C [H... 34 0.047
gi|169184025 PREDICTED: hypothetical protein [Homo sapiens] 34 0.061
gi|169179740 PREDICTED: hypothetical protein [Homo sapiens] 34 0.061
gi|169180137 PREDICTED: hypothetical protein [Homo sapiens] 34 0.061
gi|239755943 PREDICTED: hypothetical protein [Homo sapiens] 33 0.080
gi|169165603 PREDICTED: similar to proline rich 20 [Homo sapiens] 33 0.080
gi|169166067 PREDICTED: similar to proline rich 20 [Homo sapiens] 33 0.080
gi|110832843 TBP-associated factor 4 [Homo sapiens] 33 0.10
gi|239757626 PREDICTED: hypothetical protein XP_002345507 [Homo ... 33 0.14
gi|239757005 PREDICTED: hypothetical protein [Homo sapiens] 33 0.14
gi|239751519 PREDICTED: hypothetical protein [Homo sapiens] 33 0.14
gi|239748777 PREDICTED: hypothetical protein [Homo sapiens] 33 0.14
gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo sapi... 33 0.14
gi|239746026 PREDICTED: hypothetical protein XP_002344173 [Homo ... 33 0.14
>gi|148747397 deleted in lymphocytic leukemia, 7 [Homo sapiens]
Length = 160
Score = 322 bits (825), Expect = 9e-89
Identities = 160/160 (100%), Positives = 160/160 (100%)
Query: 1 MASPAPLVASISHQMVALQTLQLLQQEWGWGDGPVAPGNPRDPDHVSTAPARRSGPPRAR 60
MASPAPLVASISHQMVALQTLQLLQQEWGWGDGPVAPGNPRDPDHVSTAPARRSGPPRAR
Sbjct: 1 MASPAPLVASISHQMVALQTLQLLQQEWGWGDGPVAPGNPRDPDHVSTAPARRSGPPRAR 60
Query: 61 PGPGREERGGGVGTRSRRTAARANSPEEEVVRGAEGGAELLPFPRDRGPCTLAQMAMRSA 120
PGPGREERGGGVGTRSRRTAARANSPEEEVVRGAEGGAELLPFPRDRGPCTLAQMAMRSA
Sbjct: 61 PGPGREERGGGVGTRSRRTAARANSPEEEVVRGAEGGAELLPFPRDRGPCTLAQMAMRSA 120
Query: 121 LARVVDSTSELVSVEQTLLGPLQQERSFPIHLKLQLLANE 160
LARVVDSTSELVSVEQTLLGPLQQERSFPIHLKLQLLANE
Sbjct: 121 LARVVDSTSELVSVEQTLLGPLQQERSFPIHLKLQLLANE 160
>gi|239748752 PREDICTED: hypothetical protein XP_002346787 [Homo
sapiens]
Length = 278
Score = 38.1 bits (87), Expect = 0.003
Identities = 35/98 (35%), Positives = 39/98 (39%), Gaps = 9/98 (9%)
Query: 33 GPVAPGNPRDPDHVSTAPARRSGPPRAR---PGPGRE----ERGGGVGTRSRRTAARANS 85
GP PG R +S + R SGPPRAR P P RE RG G R ARA S
Sbjct: 123 GPCLPGARRRLFSLSVS--RSSGPPRARSCAPHPAREGMATTRGPEAGLRVSGRGARAGS 180
Query: 86 PEEEVVRGAEGGAELLPFPRDRGPCTLAQMAMRSALAR 123
A P PC + A RS L+R
Sbjct: 181 STAPTRAQASPARPGFPPCLRSPPCPASSRAFRSCLSR 218
>gi|239754955 PREDICTED: similar to COL22A1 protein [Homo sapiens]
Length = 1073
Score = 36.2 bits (82), Expect = 0.012
Identities = 28/75 (37%), Positives = 32/75 (42%), Gaps = 2/75 (2%)
Query: 34 PVAPGNPRDPDHVSTAPARRSGPPRARPGPGREERGGGVGTRSRRTAARANSPEEEVVRG 93
P A GNP P HV AP SGPP + PG G G R + AA V
Sbjct: 394 PGAAGNPGAPGHVG-APGP-SGPPGSVGAPGLRGTPGKDGERGEKGAAGEEGSPGPVGPR 451
Query: 94 AEGGAELLPFPRDRG 108
+ GA LP P +G
Sbjct: 452 GDPGAPGLPGPPGKG 466
>gi|40805823 collagen, type XXII, alpha 1 [Homo sapiens]
Length = 1626
Score = 36.2 bits (82), Expect = 0.012
Identities = 28/75 (37%), Positives = 32/75 (42%), Gaps = 2/75 (2%)
Query: 34 PVAPGNPRDPDHVSTAPARRSGPPRARPGPGREERGGGVGTRSRRTAARANSPEEEVVRG 93
P A GNP P HV AP SGPP + PG G G R + AA V
Sbjct: 912 PGAAGNPGAPGHVG-APGP-SGPPGSVGAPGLRGTPGKDGERGEKGAAGEEGSPGPVGPR 969
Query: 94 AEGGAELLPFPRDRG 108
+ GA LP P +G
Sbjct: 970 GDPGAPGLPGPPGKG 984
Score = 28.5 bits (62), Expect = 2.6
Identities = 20/63 (31%), Positives = 25/63 (39%), Gaps = 2/63 (3%)
Query: 34 PVAPGNPRDPDHVSTAPARRSGPPRARPGPGREERGGGVGTRSRRTAARANSPEEEVVRG 93
P +PG+ DP P SGPP + PG G G + A R +P RG
Sbjct: 1033 PGSPGSRGDPGIGVAGPPGPSGPPGDKGSPGSRGLPGFPGPQG--PAGRDGAPGNPGERG 1090
Query: 94 AEG 96
G
Sbjct: 1091 PPG 1093
>gi|239744552 PREDICTED: hypothetical protein [Homo sapiens]
Length = 221
Score = 35.4 bits (80), Expect = 0.021
Identities = 40/129 (31%), Positives = 50/129 (38%), Gaps = 22/129 (17%)
Query: 9 ASISHQMVALQTLQLLQQEWGWGDGPVAPGNPRDPDHVSTAPARRS-GPPRARPGPGREE 67
+S+S + + +Q GWG G G R ++T +R GP R R R
Sbjct: 12 SSLSRETIGVQP--------GWG-GEEVQGLARAG--LATGKGQRPPGPGRVRAAQARAR 60
Query: 68 RGGGVGTRSRRTAARANSPEEEVVRGAEGGAELLPFPRD--RGPCTLAQMAMRSALARVV 125
RGGG R A A P R A GGA P P RGP A SA +
Sbjct: 61 RGGGA---RERPAEGARGP-----RAARGGARAAPMPSSAPRGPTEPALRRPSSAERPLA 112
Query: 126 DSTSELVSV 134
+ S SV
Sbjct: 113 QAPSSSASV 121
>gi|50233789 cancer/testis antigen 2 isoform LAGE-1a [Homo
sapiens]
Length = 180
Score = 35.0 bits (79), Expect = 0.027
Identities = 26/70 (37%), Positives = 27/70 (38%), Gaps = 14/70 (20%)
Query: 29 GWGDGPVAPGNPRDPDHVSTAPARRSGPPRARPGPGREERGGGVGTRSRRTAARANSPEE 88
G DGP PG P P GP A GR RG G AARA+ P
Sbjct: 13 GDADGPGGPGIPDGPG------GNAGGPGEAGATGGRGPRGAG--------AARASGPRG 58
Query: 89 EVVRGAEGGA 98
RG GGA
Sbjct: 59 GAPRGPHGGA 68
>gi|10337609 cancer/testis antigen 2 isoform LAGE-1b [Homo
sapiens]
Length = 210
Score = 35.0 bits (79), Expect = 0.027
Identities = 26/70 (37%), Positives = 27/70 (38%), Gaps = 14/70 (20%)
Query: 29 GWGDGPVAPGNPRDPDHVSTAPARRSGPPRARPGPGREERGGGVGTRSRRTAARANSPEE 88
G DGP PG P P GP A GR RG G AARA+ P
Sbjct: 13 GDADGPGGPGIPDGPG------GNAGGPGEAGATGGRGPRGAG--------AARASGPRG 58
Query: 89 EVVRGAEGGA 98
RG GGA
Sbjct: 59 GAPRGPHGGA 68
>gi|239757038 PREDICTED: hypothetical protein [Homo sapiens]
Length = 144
Score = 35.0 bits (79), Expect = 0.027
Identities = 18/54 (33%), Positives = 22/54 (40%)
Query: 43 PDHVSTAPARRSGPPRARPGPGREERGGGVGTRSRRTAARANSPEEEVVRGAEG 96
PDH P R PP R R + GG R + +R P E +RG G
Sbjct: 52 PDHPLRRPGRERPPPTRRGQTSRAQPGGNPSAREPASNSRRGQPRETDLRGHPG 105
>gi|239751528 PREDICTED: hypothetical protein [Homo sapiens]
Length = 144
Score = 35.0 bits (79), Expect = 0.027
Identities = 18/54 (33%), Positives = 22/54 (40%)
Query: 43 PDHVSTAPARRSGPPRARPGPGREERGGGVGTRSRRTAARANSPEEEVVRGAEG 96
PDH P R PP R R + GG R + +R P E +RG G
Sbjct: 52 PDHPLRRPGRERPPPTRRGQTSRAQPGGNPSAREPASNSRRGQPRETDLRGHPG 105
>gi|239746039 PREDICTED: hypothetical protein XP_002343635 [Homo
sapiens]
Length = 144
Score = 35.0 bits (79), Expect = 0.027
Identities = 18/54 (33%), Positives = 22/54 (40%)
Query: 43 PDHVSTAPARRSGPPRARPGPGREERGGGVGTRSRRTAARANSPEEEVVRGAEG 96
PDH P R PP R R + GG R + +R P E +RG G
Sbjct: 52 PDHPLRRPGRERPPPTRRGQTSRAQPGGNPSAREPASNSRRGQPRETDLRGHPG 105
>gi|146198654 zinc finger protein 768 [Homo sapiens]
Length = 540
Score = 35.0 bits (79), Expect = 0.027
Identities = 27/88 (30%), Positives = 37/88 (42%), Gaps = 14/88 (15%)
Query: 40 PRDPDHVSTAPARRSGPPRARP-GPGREERGGGVGTR------------SRRTAARANSP 86
PR P+ S +P S PR P PG E R G R S+ T + SP
Sbjct: 102 PRSPESDSQSPEFESQSPRYEPQSPGYEPRSPGYEPRSPGYESESSRYESQNTELKTQSP 161
Query: 87 EEEVVRGA-EGGAELLPFPRDRGPCTLA 113
E E + GAE+L P ++ P ++
Sbjct: 162 EFEAQSSKFQEGAEMLLNPEEKSPLNIS 189
>gi|27545323 chondroitin polymerizing factor [Homo sapiens]
Length = 775
Score = 34.7 bits (78), Expect = 0.036
Identities = 23/57 (40%), Positives = 27/57 (47%), Gaps = 5/57 (8%)
Query: 20 TLQLLQQEW---GWGDGPVAPGNPRDPDHVSTAPARRSGPPRARPGPGREERGGGVG 73
TL LL W G GP PG+ P +T ARR P +PG RE+ G G G
Sbjct: 25 TLSLLSVTWVEEPCGPGPPQPGDSELPPRGNTNAARR--PNSVQPGAEREKPGAGEG 79
>gi|4503119 cancer/testis antigen 1B [Homo sapiens]
Length = 180
Score = 34.3 bits (77), Expect = 0.047
Identities = 26/70 (37%), Positives = 27/70 (38%), Gaps = 14/70 (20%)
Query: 29 GWGDGPVAPGNPRDPDHVSTAPARRSGPPRARPGPGREERGGGVGTRSRRTAARANSPEE 88
G DGP PG P P GP A GR RG G AARA+ P
Sbjct: 13 GDADGPGGPGIPDGPG------GNAGGPGEAGATGGRGPRGAG--------AARASGPGG 58
Query: 89 EVVRGAEGGA 98
RG GGA
Sbjct: 59 GAPRGPHGGA 68
>gi|224809412 myocyte enhancer factor 2B isoform a [Homo sapiens]
Length = 368
Score = 34.3 bits (77), Expect = 0.047
Identities = 26/84 (30%), Positives = 35/84 (41%), Gaps = 6/84 (7%)
Query: 27 EWGWGDGPVAPGNPRDPDHVSTAPARRSGPP--RARPGPGREERGGGVGTRSRRTAARAN 84
E+G GD P PG + P P+R GPP ++P GR G TR
Sbjct: 257 EYGLGDPPPPPGLLQPPTLAPWQPSRGDGPPAVSSQPSGGRSLGEEGPPTRGASPPTPPV 316
Query: 85 SPEEEVVRGAEGG----AELLPFP 104
S + E + A GG + P+P
Sbjct: 317 SIKSERLSPAPGGPGDFPKTFPYP 340
>gi|154816198 transcription elongation factor B polypeptide 3C-like
[Homo sapiens]
Length = 546
Score = 34.3 bits (77), Expect = 0.047
Identities = 25/92 (27%), Positives = 37/92 (40%), Gaps = 9/92 (9%)
Query: 19 QTLQLLQQEWGWGDGPVAPGNP-RDPDHVSTAPARRSGPPRARPGPGREERGGGVGTRSR 77
+ LQ ++ WG+ + AP +P P+H T ARR+ P + RP P R +
Sbjct: 101 EALQEREKAWGFPENATAPRSPSHSPEHRRT--ARRTPPGQQRPHPRSPSREPRAERKRP 158
Query: 78 RTAARANSPEEEVVRGAEGGAELLPFPRDRGP 109
R A + P + P P GP
Sbjct: 159 RMAPADSGPHR------DPPTRTAPLPMPEGP 184
>gi|21281685 cancer/testis antigen 1A [Homo sapiens]
Length = 180
Score = 34.3 bits (77), Expect = 0.047
Identities = 26/70 (37%), Positives = 27/70 (38%), Gaps = 14/70 (20%)
Query: 29 GWGDGPVAPGNPRDPDHVSTAPARRSGPPRARPGPGREERGGGVGTRSRRTAARANSPEE 88
G DGP PG P P GP A GR RG G AARA+ P
Sbjct: 13 GDADGPGGPGIPDGPG------GNAGGPGEAGATGGRGPRGAG--------AARASGPGG 58
Query: 89 EVVRGAEGGA 98
RG GGA
Sbjct: 59 GAPRGPHGGA 68
>gi|156938279 transcription elongation factor B polypeptide 3C [Homo
sapiens]
Length = 546
Score = 34.3 bits (77), Expect = 0.047
Identities = 25/92 (27%), Positives = 37/92 (40%), Gaps = 9/92 (9%)
Query: 19 QTLQLLQQEWGWGDGPVAPGNP-RDPDHVSTAPARRSGPPRARPGPGREERGGGVGTRSR 77
+ LQ ++ WG+ + AP +P P+H T ARR+ P + RP P R +
Sbjct: 101 EALQEREKAWGFPENATAPRSPSHSPEHRRT--ARRTPPGQQRPHPRSPSREPRAERKRP 158
Query: 78 RTAARANSPEEEVVRGAEGGAELLPFPRDRGP 109
R A + P + P P GP
Sbjct: 159 RMAPADSGPHR------DPPTRTAPLPMPEGP 184
>gi|169184025 PREDICTED: hypothetical protein [Homo sapiens]
Length = 230
Score = 33.9 bits (76), Expect = 0.061
Identities = 24/86 (27%), Positives = 32/86 (37%), Gaps = 4/86 (4%)
Query: 4 PAPLVASISHQMVALQTLQLLQQEWGWGDGPVAPGNPRDPDHVSTAPARRSGPPRARPGP 63
P+PL A++ Q L + W G A + P+H T P + R R
Sbjct: 149 PSPLPAALESQKPNSAQLSV----WRARPGLQAQIHVPTPEHTQTPPESETASGRLRSSG 204
Query: 64 GREERGGGVGTRSRRTAARANSPEEE 89
R G G +R RT N P E
Sbjct: 205 LRGGTGAGAASRGNRTVVTGNVPRTE 230
>gi|169179740 PREDICTED: hypothetical protein [Homo sapiens]
Length = 230
Score = 33.9 bits (76), Expect = 0.061
Identities = 24/86 (27%), Positives = 32/86 (37%), Gaps = 4/86 (4%)
Query: 4 PAPLVASISHQMVALQTLQLLQQEWGWGDGPVAPGNPRDPDHVSTAPARRSGPPRARPGP 63
P+PL A++ Q L + W G A + P+H T P + R R
Sbjct: 149 PSPLPAALESQKPNSAQLSV----WRARPGLQAQIHVPTPEHTQTPPESETASGRLRSSG 204
Query: 64 GREERGGGVGTRSRRTAARANSPEEE 89
R G G +R RT N P E
Sbjct: 205 LRGGTGAGAASRGNRTVVTGNVPRTE 230
>gi|169180137 PREDICTED: hypothetical protein [Homo sapiens]
Length = 230
Score = 33.9 bits (76), Expect = 0.061
Identities = 24/86 (27%), Positives = 32/86 (37%), Gaps = 4/86 (4%)
Query: 4 PAPLVASISHQMVALQTLQLLQQEWGWGDGPVAPGNPRDPDHVSTAPARRSGPPRARPGP 63
P+PL A++ Q L + W G A + P+H T P + R R
Sbjct: 149 PSPLPAALESQKPNSAQLSV----WRARPGLQAQIHVPTPEHTQTPPESETASGRLRSSG 204
Query: 64 GREERGGGVGTRSRRTAARANSPEEE 89
R G G +R RT N P E
Sbjct: 205 LRGGTGAGAASRGNRTVVTGNVPRTE 230
>gi|239755943 PREDICTED: hypothetical protein [Homo sapiens]
Length = 107
Score = 33.5 bits (75), Expect = 0.080
Identities = 24/77 (31%), Positives = 32/77 (41%), Gaps = 17/77 (22%)
Query: 40 PRDPDHVSTAPARRSGPPRA-------RPGPGREERGGGVGTRSRRTAARANSPEEEVVR 92
PR P+ + +R G P+A +PGP R GG G S R + V
Sbjct: 3 PRAPERAAAGGGKRRGRPQAGARWLSPQPGPARPPEEGGSGRLSGRGS----------VE 52
Query: 93 GAEGGAELLPFPRDRGP 109
G +G + L PRD P
Sbjct: 53 GEKGQGKDLLSPRDPAP 69
>gi|169165603 PREDICTED: similar to proline rich 20 [Homo sapiens]
Length = 210
Score = 33.5 bits (75), Expect = 0.080
Identities = 19/42 (45%), Positives = 22/42 (52%), Gaps = 3/42 (7%)
Query: 32 DGPVAPGNPRDPDHVSTAPARRSGPPRARPGP--GREERGGG 71
+ PV P P P P RR P RA+P P GR +RGGG
Sbjct: 34 EDPVDPVQPAKPT-AYVKPMRREPPARAQPAPPAGRGQRGGG 74
>gi|169166067 PREDICTED: similar to proline rich 20 [Homo sapiens]
Length = 210
Score = 33.5 bits (75), Expect = 0.080
Identities = 19/42 (45%), Positives = 22/42 (52%), Gaps = 3/42 (7%)
Query: 32 DGPVAPGNPRDPDHVSTAPARRSGPPRARPGP--GREERGGG 71
+ PV P P P P RR P RA+P P GR +RGGG
Sbjct: 34 EDPVDPVQPAKPT-AYVKPMRREPPARAQPAPPAGRGQRGGG 74
>gi|110832843 TBP-associated factor 4 [Homo sapiens]
Length = 1085
Score = 33.1 bits (74), Expect = 0.10
Identities = 31/92 (33%), Positives = 37/92 (40%), Gaps = 17/92 (18%)
Query: 34 PVAPGNPRDPDHVSTAPARRSGP-PRARPGPG-----REERGGGVGTRSRRTAARANS-- 85
P P P P A A R+GP P PGPG + G G +AA NS
Sbjct: 154 PAGPAKPAGP----AALAARAGPGPGPGPGPGPGPGPGKPAGPGAAQTLNGSAALLNSHH 209
Query: 86 ---PEEEVVRGAEGGAELLPFPRDRGPCTLAQ 114
P +V G A LLP P+ P T+ Q
Sbjct: 210 AAAPAVSLVN--NGPAALLPLPKPAAPGTVIQ 239
Score = 30.0 bits (66), Expect = 0.88
Identities = 25/76 (32%), Positives = 25/76 (32%), Gaps = 5/76 (6%)
Query: 34 PVAPGNPRDPDHVSTAPARRSGPPRARPGPGREERGGGVGTRSRRTAARANSPEEEVVRG 93
P AP P P APA PP P G G TAA A P G
Sbjct: 252 PAAPSPPAAP--APAAPAAAPPPPPPAPATLARPPGHPAGPP---TAAPAVPPPAAAQNG 306
Query: 94 AEGGAELLPFPRDRGP 109
GA P P GP
Sbjct: 307 GSAGAAPAPAPAAGGP 322
Score = 26.9 bits (58), Expect = 7.5
Identities = 23/71 (32%), Positives = 26/71 (36%), Gaps = 11/71 (15%)
Query: 31 GDGPVAPGNPRDPDHVSTAPARRSGPP---RARPGPGREERGGGVGTRSRRTAARANSPE 87
G GP AP AP PP RARPG G +R G R A P
Sbjct: 72 GAGPAAPAEG--------APGAAPEPPPAGRARPGGGGPQRPGPPSPRRPLVPAGPAPPA 123
Query: 88 EEVVRGAEGGA 98
++ EG A
Sbjct: 124 AKLRPPPEGSA 134
>gi|239757626 PREDICTED: hypothetical protein XP_002345507 [Homo
sapiens]
Length = 609
Score = 32.7 bits (73), Expect = 0.14
Identities = 27/76 (35%), Positives = 31/76 (40%), Gaps = 19/76 (25%)
Query: 34 PVAPGNPRDPDHVSTAPARRSGPPRARPG-------PGREERGGGVGTRSRRTAARANSP 86
P APG D D VST P P A+PG PG ++ GG G R SP
Sbjct: 474 PSAPGG--DQDRVSTTPQ-----PTAQPGSGAGPQRPGPTQKRGGRGVR-----VPEGSP 521
Query: 87 EEEVVRGAEGGAELLP 102
G GGA+ P
Sbjct: 522 ARIAFSGRRGGAKAQP 537
>gi|239757005 PREDICTED: hypothetical protein [Homo sapiens]
Length = 183
Score = 32.7 bits (73), Expect = 0.14
Identities = 18/52 (34%), Positives = 25/52 (48%), Gaps = 2/52 (3%)
Query: 37 PGNPRDPDHVSTAPARRSG--PPRARPGPGREERGGGVGTRSRRTAARANSP 86
PG+ ++ AP RR P +PG G GGG G ++ RT A +P
Sbjct: 107 PGSRAGGRYLGVAPGRRRSLLPSAVQPGRGGHGAGGGAGPQALRTRAPLATP 158
>gi|239751519 PREDICTED: hypothetical protein [Homo sapiens]
Length = 183
Score = 32.7 bits (73), Expect = 0.14
Identities = 18/52 (34%), Positives = 25/52 (48%), Gaps = 2/52 (3%)
Query: 37 PGNPRDPDHVSTAPARRSG--PPRARPGPGREERGGGVGTRSRRTAARANSP 86
PG+ ++ AP RR P +PG G GGG G ++ RT A +P
Sbjct: 107 PGSRAGGRYLGVAPGRRRSLLPSAVQPGRGGHGAGGGAGPQALRTRAPLATP 158
>gi|239748777 PREDICTED: hypothetical protein [Homo sapiens]
Length = 350
Score = 32.7 bits (73), Expect = 0.14
Identities = 18/44 (40%), Positives = 21/44 (47%), Gaps = 2/44 (4%)
Query: 33 GPVAPGNPRDPDHVSTAPARRSGPPRARPGPGRE--ERGGGVGT 74
G P PR DH +PA R P + P PGR +R G GT
Sbjct: 187 GDPRPRAPRPGDHPRRSPALRETPSLSPPSPGRRNGKRAAGKGT 230
>gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo
sapiens]
Length = 816
Score = 32.7 bits (73), Expect = 0.14
Identities = 25/90 (27%), Positives = 34/90 (37%)
Query: 34 PVAPGNPRDPDHVSTAPARRSGPPRARPGPGREERGGGVGTRSRRTAARANSPEEEVVRG 93
P PG+PR P V+ A R G A ER GG+G + +A P
Sbjct: 27 PRPPGSPRPPPPVTPAALRVLGAAGAVGRKPLAERAGGIGGATIPESAPRAGPTRTSRPP 86
Query: 94 AEGGAELLPFPRDRGPCTLAQMAMRSALAR 123
A G E P ++ P ++ S R
Sbjct: 87 ASGRGERAPPAKNTSPGPVSSPGRASGTTR 116
>gi|239746026 PREDICTED: hypothetical protein XP_002344173 [Homo
sapiens]
Length = 183
Score = 32.7 bits (73), Expect = 0.14
Identities = 18/52 (34%), Positives = 25/52 (48%), Gaps = 2/52 (3%)
Query: 37 PGNPRDPDHVSTAPARRSG--PPRARPGPGREERGGGVGTRSRRTAARANSP 86
PG+ ++ AP RR P +PG G GGG G ++ RT A +P
Sbjct: 107 PGSRAGGRYLGVAPGRRRSLLPSAVQPGRGGHGAGGGAGPQALRTRAPLATP 158
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.314 0.132 0.390
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,534,184
Number of Sequences: 37866
Number of extensions: 441234
Number of successful extensions: 2924
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 141
Number of HSP's successfully gapped in prelim test: 291
Number of HSP's that attempted gapping in prelim test: 2547
Number of HSP's gapped (non-prelim): 647
length of query: 160
length of database: 18,247,518
effective HSP length: 94
effective length of query: 66
effective length of database: 14,688,114
effective search space: 969415524
effective search space used: 969415524
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 57 (26.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.