Guide to the Human Genome
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Name: PELI2 Sequence: fasta or formatted (420aa) NCBI GI: 10864063
Description:

pellino 2

Referenced in:

Additional Serine / Threonine Protein Kinases

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.1         30           2
 C cysteine            3.8         16           1
 D aspartate           4.3         18           1
 E glutamate           6.2         26           2
 F phenylalanine       3.8         16           1
 G glycine             8.3         35           2
 H histidine           4.0         17           1
 I isoleucine          4.5         19           1
 K lysine              4.8         20           1
 L leucine             6.0         25           2
 M methionine          1.2          5           1
 N asparagine          4.0         17           1
 P proline             6.4         27           2
 Q glutamine           4.8         20           2
 R arginine            5.5         23           2
 S serine              6.7         28           2
 T threonine           7.1         30           2
 V valine              6.9         29           3
 W tryptophan          1.7          7           1
 Y tyrosine            2.9         12           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   pellino 2 
PELI1                 0.833   pellino protein 
PELI3                 0.708   pellino 3 alpha isoform 2 
PELI3                 0.692   pellino 3 alpha isoform 1 
C20orf95              0.015   PREDICTED: chromosome 20 open reading frame 95 [Hom...
C20orf95              0.015   PREDICTED: chromosome 20 open reading frame 95 [Hom...
C20orf95              0.015   PREDICTED: Rho GTPase-activating protein 18-like [H...
NFX1                  0.006   nuclear transcription factor, X-box binding 1 isofor...
NFX1                  0.006   nuclear transcription factor, X-box binding 1 isofor...
NFX1                  0.006   nuclear transcription factor, X-box binding 1 isofor...
SMARCC2               0.006   SWI/SNF-related matrix-associated actin-dependent re...
SMARCC2               0.006   SWI/SNF-related matrix-associated actin-dependent re...
SMARCC2               0.006   SWI/SNF-related matrix-associated actin-dependent r...
LOC100170229          0.006   hypothetical protein LOC100170229 
MLL5                  0.005   myeloid/lymphoid or mixed-lineage leukemia 5 
MLL5                  0.005   myeloid/lymphoid or mixed-lineage leukemia 5 
ZNF787                0.005   zinc finger protein 787 
DDX20                 0.005   DEAD (Asp-Glu-Ala-Asp) box polypeptide 20 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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