Guide to the Human Genome
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Name: GNPTG Sequence: fasta or formatted (305aa) NCBI GI: 14249738
Description:

N-acetylglucosamine-1-phosphotransferase, gamma subunit

Referenced in:

Protein Glycosylation

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.5         23           2
 C cysteine            2.3          7           1
 D aspartate           3.0          9           1
 E glutamate           8.9         27           2
 F phenylalanine       3.6         11           1
 G glycine             7.9         24           2
 H histidine           3.9         12           1
 I isoleucine          2.0          6           1
 K lysine              4.9         15           1
 L leucine            12.8         39           5
 M methionine          1.3          4           1
 N asparagine          3.6         11           2
 P proline             7.5         23           1
 Q glutamine           4.3         13           1
 R arginine            5.9         18           1
 S serine              6.2         19           1
 T threonine           6.2         19           1
 V valine              4.3         13           2
 W tryptophan          1.6          5           1
 Y tyrosine            2.3          7           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   N-acetylglucosamine-1-phosphotransferase, gamma subu... 
PRKCSH                0.053   protein kinase C substrate 80K-H isoform 2 
PRKCSH                0.053   protein kinase C substrate 80K-H isoform 1 
C2orf30               0.030   erlectin isoform 1 
C2orf30               0.026   erlectin isoform 3 
C2orf30               0.025   erlectin isoform 2 
OS9                   0.021   osteosarcoma amplified 9 isoform 4 precursor 
OS9                   0.021   osteosarcoma amplified 9 isoform 3 precursor 
OS9                   0.021   osteosarcoma amplified 9 isoform 2 precursor 
OS9                   0.021   osteosarcoma amplified 9 isoform 1 precursor 
KIR2DL4               0.008   killer cell immunoglobulin-like receptor, two domai...
FSTL5                 0.008   follistatin-like 5 isoform c 
FSTL5                 0.008   follistatin-like 5 isoform b 
PELI3                 0.008   pellino 3 alpha isoform 2 
PELI3                 0.008   pellino 3 alpha isoform 1 
DSP                   0.008   desmoplakin isoform I 
CDT1                  0.008   chromatin licensing and DNA replication factor 1 [H...
KIF5C                 0.007   kinesin family member 5C 
BIN1                  0.007   bridging integrator 1 isoform 2 
PLXNA2                0.007   plexin A2 
OLFM3                 0.007   olfactomedin 3 
QSOX2                 0.005   quiescin Q6 sulfhydryl oxidase 2 
TTC17                 0.005   tetratricopeptide repeat domain 17 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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