Guide to the Human Genome
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Name: INTS7 Sequence: fasta or formatted (962aa) NCBI GI: 7661566
Description:

integrator complex subunit 7

Referenced in:

Polyadenylation

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.8         85           3
 C cysteine            2.3         22           2
 D aspartate           3.8         37           2
 E glutamate           5.1         49           2
 F phenylalanine       3.6         35           2
 G glycine             3.8         37           1
 H histidine           2.8         27           2
 I isoleucine          5.5         53           2
 K lysine              5.4         52           1
 L leucine            12.8        123           3
 M methionine          2.3         22           2
 N asparagine          4.4         42           2
 P proline             3.6         35           3
 Q glutamine           7.6         73           5
 R arginine            4.2         40           2
 S serine              9.9         95           3
 T threonine           4.8         46           2
 V valine              6.2         60           2
 W tryptophan          0.4          4           1
 Y tyrosine            2.6         25           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   integrator complex subunit 7 
CAND1                 0.006   TIP120 protein 
BTAF1                 0.006   BTAF1 RNA polymerase II, B-TFIID transcription facto...
INTS2                 0.005   integrator complex subunit 2 
DNMBP                 0.005   dynamin binding protein 
SYNE1                 0.004   spectrin repeat containing, nuclear envelope 1 isofo...
SYNE1                 0.004   spectrin repeat containing, nuclear envelope 1 isof...
CAND2                 0.004   TBP-interacting protein isoform 1 
TNPO2                 0.004   transportin 2 (importin 3, karyopherin beta 2b) iso...
TNPO2                 0.004   transportin 2 (importin 3, karyopherin beta 2b) iso...
TNPO2                 0.004   transportin 2 (importin 3, karyopherin beta 2b) isof...
MED12                 0.004   mediator complex subunit 12 
HIRA                  0.004   HIR histone cell cycle regulation defective homolog ...
PRDM15                0.004   PR domain containing 15 isoform 2 
PRDM15                0.004   PR domain containing 15 isoform 1 
PDS5B                 0.004   PDS5, regulator of cohesion maintenance, homolog B [H...
MLL2                  0.004   myeloid/lymphoid or mixed-lineage leukemia 2 
SIL1                  0.003   SIL1 protein precursor 
SIL1                  0.003   SIL1 protein precursor 
ZFHX3                 0.003   AT-binding transcription factor 1 
MED15                 0.003   mediator complex subunit 15 isoform a 
MED15                 0.003   mediator complex subunit 15 isoform b 
MAP3K4                0.003   mitogen-activated protein kinase kinase kinase 4 iso...
MAP3K4                0.003   mitogen-activated protein kinase kinase kinase 4 iso...
FRS3                  0.003   fibroblast growth factor receptor substrate 3 
BMP2K                 0.003   BMP-2 inducible kinase isoform a 
BMP2K                 0.003   BMP-2 inducible kinase isoform b 
FAM157C               0.003   PREDICTED: family with sequence similarity 157, mem...
MN1                   0.003   meningioma  1 
PLK3                  0.003   polo-like kinase 3 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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