Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: KIF1B Sequence: fasta or formatted (1770aa) NCBI GI: 41393563
Description:

kinesin family member 1B isoform b

Referenced in:

Kinesins

Other entries for this name:
alt prot [1153aa] kinesin family member 1B isoform alpha
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.0        106           2
 C cysteine            1.4         24           1
 D aspartate           5.3         94           2
 E glutamate           9.3        164           8
 F phenylalanine       3.8         68           2
 G glycine             5.2         92           2
 H histidine           2.3         40           1
 I isoleucine          5.0         89           2
 K lysine              5.8        103           5
 L leucine             9.4        167           3
 M methionine          2.0         36           2
 N asparagine          3.8         68           2
 P proline             4.9         87           3
 Q glutamine           3.8         67           2
 R arginine            5.8        102           4
 S serine             10.2        181           2
 T threonine           5.8        103           3
 V valine              6.1        108           3
 W tryptophan          1.0         18           1
 Y tyrosine            3.0         53           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   kinesin family member 1B isoform b 
KIF1A                 0.387   axonal transport of synaptic vesicles 
KIF1B                 0.365   kinesin family member 1B isoform alpha 
KIF1C                 0.278   kinesin family member 1C 
KIF13A                0.164   kinesin family member 13A isoform d 
KIF13A                0.164   kinesin family member 13A isoform c 
KIF13A                0.164   kinesin family member 13A isoform b 
KIF13A                0.164   kinesin family member 13A isoform a 
KIF13B                0.163   kinesin family member 13B 
KIF16B                0.149   kinesin-like motor protein C20orf23 
KIF14                 0.135   kinesin family member 14 
STARD9                0.090   PREDICTED: StAR-related lipid transfer (START) doma...
STARD9                0.090   PREDICTED: StAR-related lipid transfer (START) doma...
STARD9                0.090   PREDICTED: StAR-related lipid transfer (START) doma...
KIF17                 0.079   kinesin family member 17 isoform b 
KIF17                 0.079   kinesin family member 17 isoform a 
KIF3B                 0.075   kinesin family member 3B 
KIF4B                 0.074   kinesin family member 4B 
KIF3A                 0.074   kinesin family member 3A 
KIF4A                 0.072   kinesin family member 4 
KIF3C                 0.067   kinesin family member 3C 
KIF5B                 0.066   kinesin family member 5B 
KIF15                 0.066   kinesin family member 15 
KIF27                 0.064   kinesin family member 27 
KIF5C                 0.062   kinesin family member 5C 
KIF18A                0.062   kinesin family member 18A 
KIF5A                 0.061   kinesin family member 5A 
KIF18B                0.061   kinesin family member 18B 
KIF11                 0.060   kinesin family member 11 
KIF21A                0.058   kinesin family member 21A 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press