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Search of human proteins with 148536862
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|148536862 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin d2 isoform 2 [Homo sapiens]
(510 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|148536862 SWI/SNF-related matrix-associated actin-dependent r... 1037 0.0
gi|148536864 SWI/SNF-related matrix-associated actin-dependent r... 1025 0.0
gi|21264353 SWI/SNF related, matrix associated, actin dependent ... 672 0.0
gi|51477704 SWI/SNF related, matrix associated, actin dependent ... 672 0.0
gi|51477702 SWI/SNF related, matrix associated, actin dependent ... 667 0.0
gi|133908629 SWI/SNF-related matrix-associated actin-dependent r... 646 0.0
gi|133908631 SWI/SNF-related matrix-associated actin-dependent r... 561 e-160
gi|7706501 WW domain binding protein 11 [Homo sapiens] 55 1e-07
gi|160707881 formin 2 [Homo sapiens] 52 1e-06
gi|39930517 sterile alpha motif domain containing 1 [Homo sapiens] 52 1e-06
gi|4508017 zinc finger protein 207 isoform a [Homo sapiens] 51 3e-06
gi|210032580 SET domain containing 1B [Homo sapiens] 49 1e-05
gi|166999613 FBJ murine osteosarcoma viral oncogene homolog B is... 47 3e-05
gi|208431824 forkhead box I3 [Homo sapiens] 47 4e-05
gi|190343021 Sec24-related protein D [Homo sapiens] 47 4e-05
gi|38150007 small nuclear ribonucleoprotein polypeptide B/B' iso... 47 5e-05
gi|4507125 small nuclear ribonucleoprotein polypeptide B/B' isof... 47 5e-05
gi|19924099 synapsin I isoform Ia [Homo sapiens] 47 5e-05
gi|19924097 synapsin I isoform Ib [Homo sapiens] 47 5e-05
gi|21237808 SWI/SNF-related matrix-associated actin-dependent re... 47 5e-05
gi|122891870 melanoma inhibitory activity family, member 3 [Homo... 46 7e-05
gi|4557317 annexin A11 [Homo sapiens] 46 7e-05
gi|22165433 annexin A11 [Homo sapiens] 46 7e-05
gi|22165431 annexin A11 [Homo sapiens] 46 7e-05
gi|21237805 SWI/SNF-related matrix-associated actin-dependent re... 46 7e-05
gi|194363725 SWI/SNF-related matrix-associated actin-dependent r... 46 7e-05
gi|110832843 TBP-associated factor 4 [Homo sapiens] 46 9e-05
gi|4507127 small nuclear ribonucleoprotein polypeptide C [Homo s... 45 1e-04
gi|55741675 hypothetical protein LOC22889 [Homo sapiens] 45 2e-04
gi|7706469 Kruppel-like factor [Homo sapiens] 45 2e-04
>gi|148536862 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin d2 isoform 2 [Homo sapiens]
Length = 510
Score = 1037 bits (2682), Expect = 0.0
Identities = 510/510 (100%), Positives = 510/510 (100%)
Query: 1 MSGRGAGGFPLPPLSPGGGAVAAALGAPPPPAGPGMLPGPALRGPGPAQYQRPGMSPGNR 60
MSGRGAGGFPLPPLSPGGGAVAAALGAPPPPAGPGMLPGPALRGPGPAQYQRPGMSPGNR
Sbjct: 1 MSGRGAGGFPLPPLSPGGGAVAAALGAPPPPAGPGMLPGPALRGPGPAQYQRPGMSPGNR 60
Query: 61 MPMAGLQVGPPAGSPFGAAAPLRPGMPPTMMDPFRKRLLVPQAQPPMPAQRRGLKRRKMA 120
MPMAGLQVGPPAGSPFGAAAPLRPGMPPTMMDPFRKRLLVPQAQPPMPAQRRGLKRRKMA
Sbjct: 61 MPMAGLQVGPPAGSPFGAAAPLRPGMPPTMMDPFRKRLLVPQAQPPMPAQRRGLKRRKMA 120
Query: 121 DKVLPQRIRELVPESQAYMDLLAFERKLDQTIARKRMEIQEAIKKPLTQKRKLRIYISNT 180
DKVLPQRIRELVPESQAYMDLLAFERKLDQTIARKRMEIQEAIKKPLTQKRKLRIYISNT
Sbjct: 121 DKVLPQRIRELVPESQAYMDLLAFERKLDQTIARKRMEIQEAIKKPLTQKRKLRIYISNT 180
Query: 181 FSPSKAEGDSAGTAGTPGGTPAGDKVASWELRVEGKLLDDPSKQKRKFSSFFKSLVIELD 240
FSPSKAEGDSAGTAGTPGGTPAGDKVASWELRVEGKLLDDPSKQKRKFSSFFKSLVIELD
Sbjct: 181 FSPSKAEGDSAGTAGTPGGTPAGDKVASWELRVEGKLLDDPSKQKRKFSSFFKSLVIELD 240
Query: 241 KELYGPDNHLVEWHRMPTTQETDGFQVKRPGDLNVKCTLLLMLDHQPPQYKLDPRLARLL 300
KELYGPDNHLVEWHRMPTTQETDGFQVKRPGDLNVKCTLLLMLDHQPPQYKLDPRLARLL
Sbjct: 241 KELYGPDNHLVEWHRMPTTQETDGFQVKRPGDLNVKCTLLLMLDHQPPQYKLDPRLARLL 300
Query: 301 GVHTQTRAAIMQALWLYIKHNQLQDGHEREYINCNRYFRQIFSCGRLRFSEIPMKLAGLL 360
GVHTQTRAAIMQALWLYIKHNQLQDGHEREYINCNRYFRQIFSCGRLRFSEIPMKLAGLL
Sbjct: 301 GVHTQTRAAIMQALWLYIKHNQLQDGHEREYINCNRYFRQIFSCGRLRFSEIPMKLAGLL 360
Query: 361 QHPDPIVINHVISVDPNDQKKTACYDIDVEVDDPLKAQMSNFLASTTNQQEIASLDVKIH 420
QHPDPIVINHVISVDPNDQKKTACYDIDVEVDDPLKAQMSNFLASTTNQQEIASLDVKIH
Sbjct: 361 QHPDPIVINHVISVDPNDQKKTACYDIDVEVDDPLKAQMSNFLASTTNQQEIASLDVKIH 420
Query: 421 ETIESINQLKTQRDFMLSFSTDPQDFIQEWLRSQRRDLKIITDVIGNPEEERRAAFYHQP 480
ETIESINQLKTQRDFMLSFSTDPQDFIQEWLRSQRRDLKIITDVIGNPEEERRAAFYHQP
Sbjct: 421 ETIESINQLKTQRDFMLSFSTDPQDFIQEWLRSQRRDLKIITDVIGNPEEERRAAFYHQP 480
Query: 481 WAQEAVGRHIFAKVQQRRQELEQVLGIRLT 510
WAQEAVGRHIFAKVQQRRQELEQVLGIRLT
Sbjct: 481 WAQEAVGRHIFAKVQQRRQELEQVLGIRLT 510
>gi|148536864 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin d2 isoform 1 [Homo sapiens]
Length = 531
Score = 1025 bits (2650), Expect = 0.0
Identities = 510/531 (96%), Positives = 510/531 (96%), Gaps = 21/531 (3%)
Query: 1 MSGRGAGGFPLPPLSPGGGAVAAALGAPPPPAGPGMLPGPALRGPGPA------------ 48
MSGRGAGGFPLPPLSPGGGAVAAALGAPPPPAGPGMLPGPALRGPGPA
Sbjct: 1 MSGRGAGGFPLPPLSPGGGAVAAALGAPPPPAGPGMLPGPALRGPGPAGGVGGPGAAAFR 60
Query: 49 ---------QYQRPGMSPGNRMPMAGLQVGPPAGSPFGAAAPLRPGMPPTMMDPFRKRLL 99
QYQRPGMSPGNRMPMAGLQVGPPAGSPFGAAAPLRPGMPPTMMDPFRKRLL
Sbjct: 61 PMGPAGPAAQYQRPGMSPGNRMPMAGLQVGPPAGSPFGAAAPLRPGMPPTMMDPFRKRLL 120
Query: 100 VPQAQPPMPAQRRGLKRRKMADKVLPQRIRELVPESQAYMDLLAFERKLDQTIARKRMEI 159
VPQAQPPMPAQRRGLKRRKMADKVLPQRIRELVPESQAYMDLLAFERKLDQTIARKRMEI
Sbjct: 121 VPQAQPPMPAQRRGLKRRKMADKVLPQRIRELVPESQAYMDLLAFERKLDQTIARKRMEI 180
Query: 160 QEAIKKPLTQKRKLRIYISNTFSPSKAEGDSAGTAGTPGGTPAGDKVASWELRVEGKLLD 219
QEAIKKPLTQKRKLRIYISNTFSPSKAEGDSAGTAGTPGGTPAGDKVASWELRVEGKLLD
Sbjct: 181 QEAIKKPLTQKRKLRIYISNTFSPSKAEGDSAGTAGTPGGTPAGDKVASWELRVEGKLLD 240
Query: 220 DPSKQKRKFSSFFKSLVIELDKELYGPDNHLVEWHRMPTTQETDGFQVKRPGDLNVKCTL 279
DPSKQKRKFSSFFKSLVIELDKELYGPDNHLVEWHRMPTTQETDGFQVKRPGDLNVKCTL
Sbjct: 241 DPSKQKRKFSSFFKSLVIELDKELYGPDNHLVEWHRMPTTQETDGFQVKRPGDLNVKCTL 300
Query: 280 LLMLDHQPPQYKLDPRLARLLGVHTQTRAAIMQALWLYIKHNQLQDGHEREYINCNRYFR 339
LLMLDHQPPQYKLDPRLARLLGVHTQTRAAIMQALWLYIKHNQLQDGHEREYINCNRYFR
Sbjct: 301 LLMLDHQPPQYKLDPRLARLLGVHTQTRAAIMQALWLYIKHNQLQDGHEREYINCNRYFR 360
Query: 340 QIFSCGRLRFSEIPMKLAGLLQHPDPIVINHVISVDPNDQKKTACYDIDVEVDDPLKAQM 399
QIFSCGRLRFSEIPMKLAGLLQHPDPIVINHVISVDPNDQKKTACYDIDVEVDDPLKAQM
Sbjct: 361 QIFSCGRLRFSEIPMKLAGLLQHPDPIVINHVISVDPNDQKKTACYDIDVEVDDPLKAQM 420
Query: 400 SNFLASTTNQQEIASLDVKIHETIESINQLKTQRDFMLSFSTDPQDFIQEWLRSQRRDLK 459
SNFLASTTNQQEIASLDVKIHETIESINQLKTQRDFMLSFSTDPQDFIQEWLRSQRRDLK
Sbjct: 421 SNFLASTTNQQEIASLDVKIHETIESINQLKTQRDFMLSFSTDPQDFIQEWLRSQRRDLK 480
Query: 460 IITDVIGNPEEERRAAFYHQPWAQEAVGRHIFAKVQQRRQELEQVLGIRLT 510
IITDVIGNPEEERRAAFYHQPWAQEAVGRHIFAKVQQRRQELEQVLGIRLT
Sbjct: 481 IITDVIGNPEEERRAAFYHQPWAQEAVGRHIFAKVQQRRQELEQVLGIRLT 531
>gi|21264353 SWI/SNF related, matrix associated, actin dependent
regulator of chromatin, subfamily d, member 3 isoform 1
[Homo sapiens]
Length = 470
Score = 672 bits (1734), Expect = 0.0
Identities = 338/482 (70%), Positives = 393/482 (81%), Gaps = 25/482 (5%)
Query: 40 PALRGPGPAQYQRPGMSPGNRMPMAGLQVGPPAGSPFGAAAPLRPGMPPTMMDPFRKRLL 99
P L+ P P QRPGM G RMP G +GPP GSP+ + +RPG+ P M+P RKR
Sbjct: 3 PGLQHP-PTVVQRPGMPSGARMPHQGAPMGPP-GSPYMGSPAVRPGLAPAGMEPARKRAA 60
Query: 100 VPQAQ----------PPMPAQRRGLKRRKMADKVLPQRIRELVPESQAYMDLLAFERKLD 149
P Q P PA+ R KRRKMADK+LPQRIRELVPESQAYMDLLAFERKLD
Sbjct: 61 PPPGQSQAQSQGQPVPTAPARSRSAKRRKMADKILPQRIRELVPESQAYMDLLAFERKLD 120
Query: 150 QTIARKRMEIQEAIKKPLTQKRKLRIYISNTFSPSKAEG-DSAGTAGTPGGTPAGDKVAS 208
QTI RKR++IQEA+K+P+ QKRKLR+YISNTF+P+K + DS G+ +AS
Sbjct: 121 QTIMRKRVDIQEALKRPMKQKRKLRLYISNTFNPAKPDAEDSDGS------------IAS 168
Query: 209 WELRVEGKLLDDPSKQKRKFSSFFKSLVIELDKELYGPDNHLVEWHRMPTTQETDGFQVK 268
WELRVEGKLLDDPSKQKRKFSSFFKSLVIELDK+LYGPDNHLVEWHR PTTQETDGFQVK
Sbjct: 169 WELRVEGKLLDDPSKQKRKFSSFFKSLVIELDKDLYGPDNHLVEWHRTPTTQETDGFQVK 228
Query: 269 RPGDLNVKCTLLLMLDHQPPQYKLDPRLARLLGVHTQTRAAIMQALWLYIKHNQLQDGHE 328
RPGDL+V+CTLLLMLD+QPPQ+KLDPRLARLLG+HTQ+R+AI+QALW Y+K N+LQD H+
Sbjct: 229 RPGDLSVRCTLLLMLDYQPPQFKLDPRLARLLGLHTQSRSAIVQALWQYVKTNRLQDSHD 288
Query: 329 REYINCNRYFRQIFSCGRLRFSEIPMKLAGLLQHPDPIVINHVISVDPNDQKKTACYDID 388
+EYIN ++YF+QIF C RL+FSEIP +L LL PDPIVINHVISVDP+DQKKTACYDID
Sbjct: 289 KEYINGDKYFQQIFDCPRLKFSEIPQRLTALLLPPDPIVINHVISVDPSDQKKTACYDID 348
Query: 389 VEVDDPLKAQMSNFLASTTNQQEIASLDVKIHETIESINQLKTQRDFMLSFSTDPQDFIQ 448
VEV++PLK QMS+FL ST NQQEI++LD KIHETIESINQLK QRDFMLSFS DP+ ++Q
Sbjct: 349 VEVEEPLKGQMSSFLLSTANQQEISALDSKIHETIESINQLKIQRDFMLSFSRDPKGYVQ 408
Query: 449 EWLRSQRRDLKIITDVIGNPEEERRAAFYHQPWAQEAVGRHIFAKVQQRRQELEQVLGIR 508
+ LRSQ RDLK++TDV GNPEEERRA FYHQPW+QEAV R+ + K+QQRRQELEQ L +R
Sbjct: 409 DLLRSQSRDLKVMTDVAGNPEEERRAEFYHQPWSQEAVSRYFYCKIQQRRQELEQSLVVR 468
Query: 509 LT 510
T
Sbjct: 469 NT 470
>gi|51477704 SWI/SNF related, matrix associated, actin dependent
regulator of chromatin, subfamily d, member 3 isoform 1
[Homo sapiens]
Length = 470
Score = 672 bits (1734), Expect = 0.0
Identities = 338/482 (70%), Positives = 393/482 (81%), Gaps = 25/482 (5%)
Query: 40 PALRGPGPAQYQRPGMSPGNRMPMAGLQVGPPAGSPFGAAAPLRPGMPPTMMDPFRKRLL 99
P L+ P P QRPGM G RMP G +GPP GSP+ + +RPG+ P M+P RKR
Sbjct: 3 PGLQHP-PTVVQRPGMPSGARMPHQGAPMGPP-GSPYMGSPAVRPGLAPAGMEPARKRAA 60
Query: 100 VPQAQ----------PPMPAQRRGLKRRKMADKVLPQRIRELVPESQAYMDLLAFERKLD 149
P Q P PA+ R KRRKMADK+LPQRIRELVPESQAYMDLLAFERKLD
Sbjct: 61 PPPGQSQAQSQGQPVPTAPARSRSAKRRKMADKILPQRIRELVPESQAYMDLLAFERKLD 120
Query: 150 QTIARKRMEIQEAIKKPLTQKRKLRIYISNTFSPSKAEG-DSAGTAGTPGGTPAGDKVAS 208
QTI RKR++IQEA+K+P+ QKRKLR+YISNTF+P+K + DS G+ +AS
Sbjct: 121 QTIMRKRVDIQEALKRPMKQKRKLRLYISNTFNPAKPDAEDSDGS------------IAS 168
Query: 209 WELRVEGKLLDDPSKQKRKFSSFFKSLVIELDKELYGPDNHLVEWHRMPTTQETDGFQVK 268
WELRVEGKLLDDPSKQKRKFSSFFKSLVIELDK+LYGPDNHLVEWHR PTTQETDGFQVK
Sbjct: 169 WELRVEGKLLDDPSKQKRKFSSFFKSLVIELDKDLYGPDNHLVEWHRTPTTQETDGFQVK 228
Query: 269 RPGDLNVKCTLLLMLDHQPPQYKLDPRLARLLGVHTQTRAAIMQALWLYIKHNQLQDGHE 328
RPGDL+V+CTLLLMLD+QPPQ+KLDPRLARLLG+HTQ+R+AI+QALW Y+K N+LQD H+
Sbjct: 229 RPGDLSVRCTLLLMLDYQPPQFKLDPRLARLLGLHTQSRSAIVQALWQYVKTNRLQDSHD 288
Query: 329 REYINCNRYFRQIFSCGRLRFSEIPMKLAGLLQHPDPIVINHVISVDPNDQKKTACYDID 388
+EYIN ++YF+QIF C RL+FSEIP +L LL PDPIVINHVISVDP+DQKKTACYDID
Sbjct: 289 KEYINGDKYFQQIFDCPRLKFSEIPQRLTALLLPPDPIVINHVISVDPSDQKKTACYDID 348
Query: 389 VEVDDPLKAQMSNFLASTTNQQEIASLDVKIHETIESINQLKTQRDFMLSFSTDPQDFIQ 448
VEV++PLK QMS+FL ST NQQEI++LD KIHETIESINQLK QRDFMLSFS DP+ ++Q
Sbjct: 349 VEVEEPLKGQMSSFLLSTANQQEISALDSKIHETIESINQLKIQRDFMLSFSRDPKGYVQ 408
Query: 449 EWLRSQRRDLKIITDVIGNPEEERRAAFYHQPWAQEAVGRHIFAKVQQRRQELEQVLGIR 508
+ LRSQ RDLK++TDV GNPEEERRA FYHQPW+QEAV R+ + K+QQRRQELEQ L +R
Sbjct: 409 DLLRSQSRDLKVMTDVAGNPEEERRAEFYHQPWSQEAVSRYFYCKIQQRRQELEQSLVVR 468
Query: 509 LT 510
T
Sbjct: 469 NT 470
>gi|51477702 SWI/SNF related, matrix associated, actin dependent
regulator of chromatin, subfamily d, member 3 isoform 2
[Homo sapiens]
Length = 483
Score = 667 bits (1720), Expect = 0.0
Identities = 333/470 (70%), Positives = 387/470 (82%), Gaps = 24/470 (5%)
Query: 52 RPGMSPGNRMPMAGLQVGPPAGSPFGAAAPLRPGMPPTMMDPFRKRLLVPQAQ------- 104
RPGM G RMP G +GPP GSP+ + +RPG+ P M+P RKR P Q
Sbjct: 27 RPGMPSGARMPHQGAPMGPP-GSPYMGSPAVRPGLAPAGMEPARKRAAPPPGQSQAQSQG 85
Query: 105 ---PPMPAQRRGLKRRKMADKVLPQRIRELVPESQAYMDLLAFERKLDQTIARKRMEIQE 161
P PA+ R KRRKMADK+LPQRIRELVPESQAYMDLLAFERKLDQTI RKR++IQE
Sbjct: 86 QPVPTAPARSRSAKRRKMADKILPQRIRELVPESQAYMDLLAFERKLDQTIMRKRVDIQE 145
Query: 162 AIKKPLTQKRKLRIYISNTFSPSKAEG-DSAGTAGTPGGTPAGDKVASWELRVEGKLLDD 220
A+K+P+ QKRKLR+YISNTF+P+K + DS G+ +ASWELRVEGKLLDD
Sbjct: 146 ALKRPMKQKRKLRLYISNTFNPAKPDAEDSDGS------------IASWELRVEGKLLDD 193
Query: 221 PSKQKRKFSSFFKSLVIELDKELYGPDNHLVEWHRMPTTQETDGFQVKRPGDLNVKCTLL 280
PSKQKRKFSSFFKSLVIELDK+LYGPDNHLVEWHR PTTQETDGFQVKRPGDL+V+CTLL
Sbjct: 194 PSKQKRKFSSFFKSLVIELDKDLYGPDNHLVEWHRTPTTQETDGFQVKRPGDLSVRCTLL 253
Query: 281 LMLDHQPPQYKLDPRLARLLGVHTQTRAAIMQALWLYIKHNQLQDGHEREYINCNRYFRQ 340
LMLD+QPPQ+KLDPRLARLLG+HTQ+R+AI+QALW Y+K N+LQD H++EYIN ++YF+Q
Sbjct: 254 LMLDYQPPQFKLDPRLARLLGLHTQSRSAIVQALWQYVKTNRLQDSHDKEYINGDKYFQQ 313
Query: 341 IFSCGRLRFSEIPMKLAGLLQHPDPIVINHVISVDPNDQKKTACYDIDVEVDDPLKAQMS 400
IF C RL+FSEIP +L LL PDPIVINHVISVDP+DQKKTACYDIDVEV++PLK QMS
Sbjct: 314 IFDCPRLKFSEIPQRLTALLLPPDPIVINHVISVDPSDQKKTACYDIDVEVEEPLKGQMS 373
Query: 401 NFLASTTNQQEIASLDVKIHETIESINQLKTQRDFMLSFSTDPQDFIQEWLRSQRRDLKI 460
+FL ST NQQEI++LD KIHETIESINQLK QRDFMLSFS DP+ ++Q+ LRSQ RDLK+
Sbjct: 374 SFLLSTANQQEISALDSKIHETIESINQLKIQRDFMLSFSRDPKGYVQDLLRSQSRDLKV 433
Query: 461 ITDVIGNPEEERRAAFYHQPWAQEAVGRHIFAKVQQRRQELEQVLGIRLT 510
+TDV GNPEEERRA FYHQPW+QEAV R+ + K+QQRRQELEQ L +R T
Sbjct: 434 MTDVAGNPEEERRAEFYHQPWSQEAVSRYFYCKIQQRRQELEQSLVVRNT 483
>gi|133908629 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin d1 isoform a [Homo sapiens]
Length = 515
Score = 646 bits (1666), Expect = 0.0
Identities = 335/521 (64%), Positives = 397/521 (76%), Gaps = 39/521 (7%)
Query: 14 LSPGGGAVAAALGAPPPPAGPGMLPGPALR-GPGPAQ-----------YQRPGMSPGNRM 61
++P GGA A+ GPG PGP +R GP P Q Y RPGM PG+RM
Sbjct: 10 VAPSGGAGASGGAGAAAALGPGGTPGPPVRMGPAPGQGLYRSPMPGAAYPRPGMLPGSRM 69
Query: 62 PMAGLQVGPPAGSPFGAAAPLRPGMPPTMMDPFRKRLLVPQ----AQPPMPAQRRGLKRR 117
G +GPP +G +RPG+ + MD RKR Q Q + + K++
Sbjct: 70 TPQGPSMGPPG---YGGNPSVRPGLAQSGMDQSRKRPAPQQIQQVQQQAVQNRNHNAKKK 126
Query: 118 KMADKVLPQRIRELVPESQAYMDLLAFERKLDQTIARKRMEIQEAIKKPLTQKRKLRIYI 177
KMADK+LPQRIRELVPESQAYMDLLAFERKLDQTI RKR++IQEA+K+P+ QKRKLRI+I
Sbjct: 127 KMADKILPQRIRELVPESQAYMDLLAFERKLDQTIMRKRLDIQEALKRPIKQKRKLRIFI 186
Query: 178 SNTFSPSKAEG-DSAGTAGTPGGTPAGDKVASWELRVEGKLLD-------DPSKQKRKFS 229
SNTF+P+K++ D GT VASWELRVEG+LL+ D +KQKRKFS
Sbjct: 187 SNTFNPAKSDAEDGEGT------------VASWELRVEGRLLEDSALSKYDATKQKRKFS 234
Query: 230 SFFKSLVIELDKELYGPDNHLVEWHRMPTTQETDGFQVKRPGDLNVKCTLLLMLDHQPPQ 289
SFFKSLVIELDK+LYGPDNHLVEWHR TTQETDGFQVKRPGD+NV+CT+LLMLD+QPPQ
Sbjct: 235 SFFKSLVIELDKDLYGPDNHLVEWHRTATTQETDGFQVKRPGDVNVRCTVLLMLDYQPPQ 294
Query: 290 YKLDPRLARLLGVHTQTRAAIMQALWLYIKHNQLQDGHEREYINCNRYFRQIFSCGRLRF 349
+KLDPRLARLLG+HTQTR I+QALW YIK ++LQD HERE++ C++Y +QIF R++F
Sbjct: 295 FKLDPRLARLLGIHTQTRPVIIQALWQYIKTHKLQDPHEREFVICDKYLQQIFESQRMKF 354
Query: 350 SEIPMKLAGLLQHPDPIVINHVISVDPNDQKKTACYDIDVEVDDPLKAQMSNFLASTTNQ 409
SEIP +L LL P+PI+INHVISVDPNDQKKTACYDIDVEVDD LK QM++FL ST +Q
Sbjct: 355 SEIPQRLHALLMPPEPIIINHVISVDPNDQKKTACYDIDVEVDDTLKTQMNSFLLSTASQ 414
Query: 410 QEIASLDVKIHETIESINQLKTQRDFMLSFSTDPQDFIQEWLRSQRRDLKIITDVIGNPE 469
QEIA+LD KIHETIE+INQLKTQR+FMLSF+ DPQ FI +WL+SQ RDLK +TDV+GNPE
Sbjct: 415 QEIATLDNKIHETIETINQLKTQREFMLSFARDPQGFINDWLQSQCRDLKTMTDVVGNPE 474
Query: 470 EERRAAFYHQPWAQEAVGRHIFAKVQQRRQELEQVLGIRLT 510
EERRA FY QPWAQEAV R+ ++KVQQRRQELEQ LGIR T
Sbjct: 475 EERRAEFYFQPWAQEAVCRYFYSKVQQRRQELEQALGIRNT 515
>gi|133908631 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin d1 isoform b [Homo sapiens]
Length = 474
Score = 561 bits (1445), Expect = e-160
Identities = 305/511 (59%), Positives = 358/511 (70%), Gaps = 73/511 (14%)
Query: 17 GGGAVAAALG---APPPPAGPGMLPGPAL-RGPGP-AQYQRPGMSPGNRMPMAGLQVGPP 71
GG AAALG P PP G PG L R P P A Y RPGM PG+RM G +GPP
Sbjct: 20 GGAGAAAALGPGGTPGPPVRMGPAPGQGLYRSPMPGAAYPRPGMLPGSRMTPQGPSMGPP 79
Query: 72 AGSPFGAAAPLRPGMPPTMMDPFRKRLLVPQAQP----PMPAQRRGLKRRKMADKVLPQR 127
+G +RPG+ + MD RKR Q Q + + K++KMADK+LPQR
Sbjct: 80 G---YGGNPSVRPGLAQSGMDQSRKRPAPQQIQQVQQQAVQNRNHNAKKKKMADKILPQR 136
Query: 128 IRELVPESQAYMDLLAFERKLDQTIARKRMEIQEAIKKPLTQKRKLRIYISNTFSPSKAE 187
IRELVPESQAYMDLLAFERKLDQTI RKR++IQEA+K+P+ QKRKLRI+ISNTF+P+K++
Sbjct: 137 IRELVPESQAYMDLLAFERKLDQTIMRKRLDIQEALKRPIKQKRKLRIFISNTFNPAKSD 196
Query: 188 G-DSAGTAGTPGGTPAGDKVASWELRVEGKLLDDPS-------KQKRKFSSFFKSLVIEL 239
D GT VASWELRVEG+LL+D + KQKRKFSSFFKSLVIEL
Sbjct: 197 AEDGEGT------------VASWELRVEGRLLEDSALSKYDATKQKRKFSSFFKSLVIEL 244
Query: 240 DKELYGPDNHLVEWHRMPTTQETDGFQVKRPGDLNVKCTLLLMLDHQPPQYKLDPRLARL 299
DK+LYGPDNHLVEWHR TTQETDGFQVKRPGD+NV+CT+LLMLD+QPPQ+KLDPRLARL
Sbjct: 245 DKDLYGPDNHLVEWHRTATTQETDGFQVKRPGDVNVRCTVLLMLDYQPPQFKLDPRLARL 304
Query: 300 LGVHTQTRAAIMQALWLYIKHNQLQDGHEREYINCNRYFRQIFSCGRLRFSEIPMKLAGL 359
LG+HTQTR I+QALW YIK ++LQD HERE++ C++Y +QIF R++FSEIP +L L
Sbjct: 305 LGIHTQTRPVIIQALWQYIKTHKLQDPHEREFVICDKYLQQIFESQRMKFSEIPQRLHAL 364
Query: 360 LQHPDPIVINHVISVDPNDQKKTACYDIDVEVDDPLKAQMSNFLASTTNQQEIASLDVKI 419
L P+PI+INHVISVDPNDQKKTACYDIDVEVDD LK QM++FL ST +QQEIA+L
Sbjct: 365 LMPPEPIIINHVISVDPNDQKKTACYDIDVEVDDTLKTQMNSFLLSTASQQEIATL---- 420
Query: 420 HETIESINQLKTQRDFMLSFSTDPQDFIQEWLRSQRRDLKIITDVIGNPEEERRAAFYHQ 479
D K +TDV+GNPEEERRA FY Q
Sbjct: 421 -------------------------------------DNKTMTDVVGNPEEERRAEFYFQ 443
Query: 480 PWAQEAVGRHIFAKVQQRRQELEQVLGIRLT 510
PWAQEAV R+ ++KVQQRRQELEQ LGIR T
Sbjct: 444 PWAQEAVCRYFYSKVQQRRQELEQALGIRNT 474
>gi|7706501 WW domain binding protein 11 [Homo sapiens]
Length = 641
Score = 55.5 bits (132), Expect = 1e-07
Identities = 40/106 (37%), Positives = 44/106 (41%), Gaps = 12/106 (11%)
Query: 10 PLPPLSPGGGAVAAALGAPP-------PPAGPGML-PGPALRGPGPAQYQRPGMSPGNRM 61
P PPL P G G PP PP PG+ P P L PGP + PG PG
Sbjct: 417 PAPPLRPPGPPTGLPPGPPPGAPPFLRPPGMPGLRGPLPRLLPPGPPPGRPPGPPPG--- 473
Query: 62 PMAGLQVGPPA-GSPFGAAAPLRPGMPPTMMDPFRKRLLVPQAQPP 106
P GL GPP G P P PG+PP R L+ P P
Sbjct: 474 PPPGLPPGPPPRGPPPRLPPPAPPGIPPPRPGMMRPPLVPPLGPAP 519
Score = 53.9 bits (128), Expect = 3e-07
Identities = 41/117 (35%), Positives = 50/117 (42%), Gaps = 6/117 (5%)
Query: 10 PLPPLSPGGGAVAAALGAPPPPAGPGMLPGPALRGPGPAQYQRPGMSPGNRMPMAG-LQV 68
P+P P G A L P PP G+ PGP PG + RP PG R P+ L
Sbjct: 406 PMPGPPPLGPPPAPPLRPPGPPT--GLPPGPP---PGAPPFLRPPGMPGLRGPLPRLLPP 460
Query: 69 GPPAGSPFGAAAPLRPGMPPTMMDPFRKRLLVPQAQPPMPAQRRGLKRRKMADKVLP 125
GPP G P G PG+PP L P A P +P R G+ R + + P
Sbjct: 461 GPPPGRPPGPPPGPPPGLPPGPPPRGPPPRLPPPAPPGIPPPRPGMMRPPLVPPLGP 517
Score = 44.3 bits (103), Expect = 3e-04
Identities = 30/72 (41%), Positives = 33/72 (45%), Gaps = 4/72 (5%)
Query: 10 PLPPLSPGGGAVAAALGAPPPPAGPGMLPGPALRGPGPAQYQRPGMSPGNRMPMAGLQVG 69
PLP L P G G PP P PG+ PGP RGP P P PG P G+ +
Sbjct: 453 PLPRLLPPGPPPGRPPGPPPGPP-PGLPPGPPPRGPPPR--LPPPAPPGIPPPRPGM-MR 508
Query: 70 PPAGSPFGAAAP 81
PP P G A P
Sbjct: 509 PPLVPPLGPAPP 520
>gi|160707881 formin 2 [Homo sapiens]
Length = 1722
Score = 52.0 bits (123), Expect = 1e-06
Identities = 62/214 (28%), Positives = 82/214 (38%), Gaps = 43/214 (20%)
Query: 8 GFPLPPLSPGGGAVAAALGAPPPPAGPGMLPGPALRG---PGPAQYQRPGMSPGNRMPMA 64
G P PP PG G + PPP G G+ P P L G P P G+ P +P A
Sbjct: 1150 GIPPPPPLPGAG-----IPPPPPLPGAGIPPPPPLPGVGIPPPPPLPGVGIPPPPPLPGA 1204
Query: 65 GLQVGPP---AGSPFGAAAPLRP---GMPPTMMDPFRKRLLVPQA--------------Q 104
G+ PP G P A PL P G+PP + P L+PQ
Sbjct: 1205 GIPPPPPLPGMGIPPAPAPPLPPPGTGIPPPPLLPVSGPPLLPQVGSSTLPTPQVCGFLP 1264
Query: 105 PPMPAQRRGLKRRKMADK-VLPQRIRELVPESQAYMDLLAFERKLDQTIAR--------- 154
PP+P+ GL + DK Q I P Y + K D + +
Sbjct: 1265 PPLPSGLFGLGMNQ--DKGSRKQPIEPCRPMKPLYWTRIQLHSKRDSSTSLIWEKIEEPS 1322
Query: 155 -KRMEIQEAIKKPLTQKRKLRIYISNTFSPSKAE 187
E +E K ++RK IS+T S +KA+
Sbjct: 1323 IDCHEFEELFSKTAVKERKKP--ISDTISKTKAK 1354
Score = 46.6 bits (109), Expect = 5e-05
Identities = 36/110 (32%), Positives = 44/110 (40%), Gaps = 22/110 (20%)
Query: 8 GFPLPPLSPGGGAV------AAALGAPPPPAGPGMLPGPALRGPG---PAQYQRPGMSPG 58
G PLPP PG G A + PPP G G+ P P L G G P G+ P
Sbjct: 963 GIPLPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPP 1022
Query: 59 NRMPMAGLQVGPPAGSPFGAAAPLRPGMPPTMMDPFRKRLLVPQAQPPMP 108
+P AG+ PP GA P P +P + P PP+P
Sbjct: 1023 PPLPGAGIPPPPPLP---GAGIPPPPPLPGAGIPP----------PPPLP 1059
Score = 46.2 bits (108), Expect = 7e-05
Identities = 35/104 (33%), Positives = 43/104 (41%), Gaps = 21/104 (20%)
Query: 8 GFPLPPLSPGGGAVAAALGAPPPPAGPGMLPGPALRGPG---PAQYQRPGMSPGNRMPMA 64
G P PP PG G + PPP G G+ P P L G G P R G+ P +P A
Sbjct: 1106 GIPPPPPLPGAG-----IPPPPPLPGAGIPPPPPLPGAGIPPPPPLPRVGIPPPPPLPGA 1160
Query: 65 GLQVGPPAGSPFGAAAPLRPGMPPTMMDPFRKRLLVPQAQPPMP 108
G+ PP GA P P +P + P PP+P
Sbjct: 1161 GIPPPPPLP---GAGIPPPPPLPGVGIPP----------PPPLP 1191
Score = 45.4 bits (106), Expect = 1e-04
Identities = 39/113 (34%), Positives = 47/113 (41%), Gaps = 23/113 (20%)
Query: 5 GAGGFPLPPLSPGGGAV------AAALGAPPPPAGPGMLPGPALRGPG---PAQYQRPGM 55
GAG PLPPL PG G AA+ PPP G G+ P L G G P G+
Sbjct: 928 GAGILPLPPL-PGAGIPPPPPLPGAAIPPPPPLPGAGIPLPPPLPGAGIPPPPPLPGAGI 986
Query: 56 SPGNRMPMAGLQVGPPAGSPFGAAAPLRPGMPPTMMDPFRKRLLVPQAQPPMP 108
P +P AG+ PP GA P P +P + P PP+P
Sbjct: 987 PPPPPLPGAGIPPPPPLP---GAGIPPPPPLPGAGIPP----------PPPLP 1026
Score = 43.9 bits (102), Expect = 3e-04
Identities = 34/104 (32%), Positives = 42/104 (40%), Gaps = 21/104 (20%)
Query: 8 GFPLPPLSPGGGAVAAALGAPPPPAGPGMLPGPALRGPG---PAQYQRPGMSPGNRMPMA 64
G P PP PG G + PPP G G+ P P L G G P G+ P +P A
Sbjct: 985 GIPPPPPLPGAG-----IPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGA 1039
Query: 65 GLQVGPPAGSPFGAAAPLRPGMPPTMMDPFRKRLLVPQAQPPMP 108
G+ PP GA P P +P + P PP+P
Sbjct: 1040 GIPPPPPLP---GAGIPPPPPLPGAGIPP----------PPPLP 1070
Score = 43.9 bits (102), Expect = 3e-04
Identities = 34/104 (32%), Positives = 42/104 (40%), Gaps = 21/104 (20%)
Query: 8 GFPLPPLSPGGGAVAAALGAPPPPAGPGMLPGPALRGPG---PAQYQRPGMSPGNRMPMA 64
G P PP PG G + PPP G G+ P P L G G P G+ P +P A
Sbjct: 996 GIPPPPPLPGAG-----IPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGA 1050
Query: 65 GLQVGPPAGSPFGAAAPLRPGMPPTMMDPFRKRLLVPQAQPPMP 108
G+ PP GA P P +P + P PP+P
Sbjct: 1051 GIPPPPPLP---GAGIPPPPPLPGAGIPP----------PPPLP 1081
Score = 43.9 bits (102), Expect = 3e-04
Identities = 34/104 (32%), Positives = 42/104 (40%), Gaps = 21/104 (20%)
Query: 8 GFPLPPLSPGGGAVAAALGAPPPPAGPGMLPGPALRGPG---PAQYQRPGMSPGNRMPMA 64
G P PP PG G + PPP G G+ P P L G G P G+ P +P A
Sbjct: 1007 GIPPPPPLPGAG-----IPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGA 1061
Query: 65 GLQVGPPAGSPFGAAAPLRPGMPPTMMDPFRKRLLVPQAQPPMP 108
G+ PP GA P P +P + P PP+P
Sbjct: 1062 GIPPPPPLP---GAGIPPPPPLPGAGIPP----------PPPLP 1092
Score = 43.9 bits (102), Expect = 3e-04
Identities = 34/104 (32%), Positives = 42/104 (40%), Gaps = 21/104 (20%)
Query: 8 GFPLPPLSPGGGAVAAALGAPPPPAGPGMLPGPALRGPG---PAQYQRPGMSPGNRMPMA 64
G P PP PG G + PPP G G+ P P L G G P G+ P +P A
Sbjct: 1018 GIPPPPPLPGAG-----IPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGA 1072
Query: 65 GLQVGPPAGSPFGAAAPLRPGMPPTMMDPFRKRLLVPQAQPPMP 108
G+ PP GA P P +P + P PP+P
Sbjct: 1073 GIPPPPPLP---GAGIPPPPPLPGAGIPP----------PPPLP 1103
Score = 43.9 bits (102), Expect = 3e-04
Identities = 34/104 (32%), Positives = 42/104 (40%), Gaps = 21/104 (20%)
Query: 8 GFPLPPLSPGGGAVAAALGAPPPPAGPGMLPGPALRGPG---PAQYQRPGMSPGNRMPMA 64
G P PP PG G + PPP G G+ P P L G G P G+ P +P A
Sbjct: 1029 GIPPPPPLPGAG-----IPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGA 1083
Query: 65 GLQVGPPAGSPFGAAAPLRPGMPPTMMDPFRKRLLVPQAQPPMP 108
G+ PP GA P P +P + P PP+P
Sbjct: 1084 GIPPPPPLP---GAGIPPPPPLPGVGIPP----------PPPLP 1114
Score = 43.9 bits (102), Expect = 3e-04
Identities = 38/109 (34%), Positives = 47/109 (43%), Gaps = 20/109 (18%)
Query: 8 GFPLPPLSPGGGAVAAALGAPPPPAGPGMLPGPALRGPG---PAQYQRPGMSPGNRMPMA 64
G P PP PG G + PPP G G+ P P L G G P G+ P +P A
Sbjct: 1062 GIPPPPPLPGAG-----IPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGVGIPPPPPLPGA 1116
Query: 65 GLQVGPPAGSPFGAAAPLRP-----GMPPTMMDPFRKRLLVPQAQPPMP 108
G+ PP GA P P G+PP P R+ +P PP+P
Sbjct: 1117 GIPPPPPLP---GAGIPPPPPLPGAGIPP---PPPLPRVGIP-PPPPLP 1158
Score = 43.1 bits (100), Expect = 6e-04
Identities = 36/110 (32%), Positives = 44/110 (40%), Gaps = 12/110 (10%)
Query: 8 GFPLPPLSPGGGAVAAALGAPPPPAGPGMLPGPALRGPG---PAQYQRPGMSPGNRMPMA 64
G P PP PG G + PPP G G+ P P L G G P G+ P +P
Sbjct: 1051 GIPPPPPLPGAG-----IPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGV 1105
Query: 65 GLQVGPPAGSPFGAAAPLRPGMPPTMMDPFRKRLLVPQAQPPMPAQRRGL 114
G+ PP GA P P +P + P L PP P R G+
Sbjct: 1106 GIPPPPPLP---GAGIPPPPPLPGAGIPP-PPPLPGAGIPPPPPLPRVGI 1151
Score = 43.1 bits (100), Expect = 6e-04
Identities = 35/110 (31%), Positives = 43/110 (39%), Gaps = 22/110 (20%)
Query: 8 GFPLPPLSPGGGAVAA----ALGAPPPPA--GPGMLPGPALRGPG---PAQYQRPGMSPG 58
G P PP PG G +G PPPP G G+ P P L G G P G+ P
Sbjct: 1084 GIPPPPPLPGAGIPPPPPLPGVGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPP 1143
Query: 59 NRMPMAGLQVGPPAGSPFGAAAPLRPGMPPTMMDPFRKRLLVPQAQPPMP 108
+P G+ PP GA P P +P + P PP+P
Sbjct: 1144 PPLPRVGIPPPPPLP---GAGIPPPPPLPGAGIPP----------PPPLP 1180
Score = 40.8 bits (94), Expect = 0.003
Identities = 34/107 (31%), Positives = 41/107 (38%), Gaps = 14/107 (13%)
Query: 10 PLPPLSPGGGAVAAALGAPPPPAGPGM----LPGPALRGPGPAQYQRPGMSPGNRMPMAG 65
PLP + PPPP PGM LP A+ P P Q M P P+ G
Sbjct: 860 PLPCTESSSSMPGLGMVPPPPPPLPGMTVPTLPSTAI--PQPPPLQGTEMLPPPPPPLPG 917
Query: 66 LQVGPPAGSPFGAAAPLRP----GMPPTMMDPFRKRLLVPQAQPPMP 108
+ PP P PL P G+PP P + P PP+P
Sbjct: 918 AGIPPPPPLPGAGILPLPPLPGAGIPPP--PPLPGAAIPP--PPPLP 960
Score = 40.0 bits (92), Expect = 0.005
Identities = 38/123 (30%), Positives = 47/123 (38%), Gaps = 23/123 (18%)
Query: 8 GFPLPPLSPGGGAVAAALGAPPPPAGPGMLPGPALRG---PGPAQYQRPGMSPGNRMPMA 64
G P PP PG G + PPP G G+ P P L P P G+ P +P A
Sbjct: 1117 GIPPPPPLPGAG-----IPPPPPLPGAGIPPPPPLPRVGIPPPPPLPGAGIPPPPPLPGA 1171
Query: 65 GLQVGPP---AGSP-----FGAAAPLRP-----GMPPTMMDPFRKRLLVPQAQPPMPAQR 111
G+ PP G P G P P G+PP P + P PP+P
Sbjct: 1172 GIPPPPPLPGVGIPPPPPLPGVGIPPPPPLPGAGIPPP--PPLPGMGIPPAPAPPLPPPG 1229
Query: 112 RGL 114
G+
Sbjct: 1230 TGI 1232
Score = 37.0 bits (84), Expect = 0.043
Identities = 38/119 (31%), Positives = 46/119 (38%), Gaps = 13/119 (10%)
Query: 5 GAGGFPLPPLSPGGGAV----AAALGAPPPPAGPGMLPGPALRGPG-----PAQYQRPGM 55
G G P PP G V + A+ PPP G MLP P PG P G+
Sbjct: 872 GLGMVPPPPPPLPGMTVPTLPSTAIPQPPPLQGTEMLPPPPPPLPGAGIPPPPPLPGAGI 931
Query: 56 SPGNRMPMAGLQVGPPAGSPFGAAAPLRPGMPPTMMDPFRKRLLVPQAQPPMPAQRRGL 114
P +P AG+ PP GAA P P +P + P L PP P G+
Sbjct: 932 LPLPPLPGAGIPPPPPLP---GAAIPPPPPLPGAGI-PLPPPLPGAGIPPPPPLPGAGI 986
>gi|39930517 sterile alpha motif domain containing 1 [Homo sapiens]
Length = 538
Score = 52.0 bits (123), Expect = 1e-06
Identities = 38/106 (35%), Positives = 46/106 (43%), Gaps = 9/106 (8%)
Query: 10 PLPPLSPGGGAVAAALGAPPPPAGPGMLPGPALRGPGPAQYQRPGMSPGNRMPMAG-LQV 68
P PP +P G AAA APPP P P P + PA+ R + P G Q
Sbjct: 109 PAPPRAPRGAPAAAAAAAPPPTPAPPPPPAP-VAAAAPARAPRAAAAAATAPPSPGPAQP 167
Query: 69 GPPA--GSPFGAAAPLRPGMPPTMMDPFRKRLLVPQA----QPPMP 108
GP A +P AA P P PP + P R P A +PP+P
Sbjct: 168 GPRAQRAAPL-AAPPPAPAAPPAVAPPAGPRRAPPPAVAAREPPLP 212
Score = 34.3 bits (77), Expect = 0.28
Identities = 29/85 (34%), Positives = 32/85 (37%), Gaps = 13/85 (15%)
Query: 13 PLSPGGGAVAAA-LGAPPP----------PAGPGMLPGPAL--RGPGPAQYQRPGMSPGN 59
P PG A AA L APPP PAGP P PA+ R P +P P
Sbjct: 164 PAQPGPRAQRAAPLAAPPPAPAAPPAVAPPAGPRRAPPPAVAAREPPLPPPPQPPAPPQQ 223
Query: 60 RMPMAGLQVGPPAGSPFGAAAPLRP 84
+ P PP G A RP
Sbjct: 224 QQPPPPQPQPPPEGGAVRAGGAARP 248
>gi|4508017 zinc finger protein 207 isoform a [Homo sapiens]
Length = 478
Score = 50.8 bits (120), Expect = 3e-06
Identities = 38/103 (36%), Positives = 46/103 (44%), Gaps = 13/103 (12%)
Query: 9 FPLPPLSPGGGAVA--AALGAPPPPAGPGMLPG--PALRGPGPAQYQRPGMSPG---NRM 61
F P+ P G + A G PP P PGM PG P + G P P + PG M
Sbjct: 127 FQPQPVQPQQGYIPPMAQPGLPPVPGAPGMPPGIPPLMPGVPPLMPGMPPVMPGMPPGMM 186
Query: 62 PMAGLQVGPPAGSPFGAAAPLRPGMPPTMMDPFRKRLLVPQAQ 104
PM G+ + P G P PL PGMPP M P + + P Q
Sbjct: 187 PMGGM-MPPGPGIP-----PLMPGMPPGMPPPVPRPGIPPMTQ 223
>gi|210032580 SET domain containing 1B [Homo sapiens]
Length = 1923
Score = 48.5 bits (114), Expect = 1e-05
Identities = 39/120 (32%), Positives = 50/120 (41%), Gaps = 18/120 (15%)
Query: 8 GFPLP-----PLSPGGGAVAAALGAPPPPAGPGMLPGPALRGPGPAQYQ--RPGMSPGNR 60
G PLP PL AV A P P P +LP P P P + + RP SP +
Sbjct: 1428 GLPLPLPLPLPLPLALPAVLRAQARAPTPLPP-LLPAPLASCPPPMKRKPGRPRRSPPSM 1486
Query: 61 MPMAGLQVGPPAGSPFGAAAPLRPGMPPTMMDPFR----------KRLLVPQAQPPMPAQ 110
+ + G V PPAG+ G L PG P T + P + +P PP+P Q
Sbjct: 1487 LSLDGPLVRPPAGAALGRELLLLPGQPQTPVFPSTHDPRTVTLDFRNAGIPAPPPPLPPQ 1546
Score = 35.4 bits (80), Expect = 0.12
Identities = 33/110 (30%), Positives = 40/110 (36%), Gaps = 28/110 (25%)
Query: 14 LSPGGGAVAA------ALGAPPPPAGPGMLPGPALRGPGPAQYQRPGMSPGNRMP---MA 64
++PG AVAA L PPPP P + P P P P P + P P
Sbjct: 662 VTPGAAAVAAPSVLAPTLPLPPPPGFPPLPPPPPPPPPQPGFPMPPPLPPPPPPPPPAHP 721
Query: 65 GLQVGPPAGSPFGAAAPLRPGMPPTMMDPFRKRLLVPQAQPPMPAQRRGL 114
+ V PP P PG+PP P PP+P GL
Sbjct: 722 AVTVPPP-------PLPAPPGVPP------------PPILPPLPPFPPGL 752
Score = 33.5 bits (75), Expect = 0.47
Identities = 31/101 (30%), Positives = 39/101 (38%), Gaps = 15/101 (14%)
Query: 10 PLPPLSPGGGAVAAALGAPPPP--AGPGMLPGPALRGPGPAQYQRPGMSPGNRMPMAGLQ 67
PLPP P A+ PPPP A PG+ P P L P PG+ P ++ M+ +
Sbjct: 708 PLPPPPPPPPPAHPAVTVPPPPLPAPPGVPPPPIL---PPLPPFPPGLFPVMQVDMSHVL 764
Query: 68 VGPPAGSPFGAAAPLRPGMPPTMMDPFRKRLLVPQAQPPMP 108
G G P M M RL+ Q P P
Sbjct: 765 GGQWGGMP----------MSFQMQTQVLSRLMTGQGACPYP 795
Score = 32.7 bits (73), Expect = 0.80
Identities = 25/79 (31%), Positives = 28/79 (35%), Gaps = 8/79 (10%)
Query: 10 PLPPLSPGGGAVAAALGAPPPPAGPGMLPGPALRGPGPAQYQRPGMSPGNRMPMAGLQVG 69
P PL P G PPPP PG P L P P P P +P L
Sbjct: 677 PTLPLPPPPGFPPLPPPPPPPPPQPGFPMPPPLPPPPPPP---PPAHPAVTVPPPPLPAP 733
Query: 70 PPAGSPFGAAAPLRPGMPP 88
P P P+ P +PP
Sbjct: 734 PGVPPP-----PILPPLPP 747
Score = 30.4 bits (67), Expect = 4.0
Identities = 29/101 (28%), Positives = 36/101 (35%), Gaps = 17/101 (16%)
Query: 12 PPLSPGGGAVAAALGAPPPPAGPGMLPGPALRGPGPAQYQRPGMSPGNRMPMAGLQV--G 69
PP PG A L +P PPA RP +SP R P L+V
Sbjct: 1225 PPEEPGLSQEGAMLLSPEPPA--------------KEVEARPPLSP-ERAPEHDLEVEPE 1269
Query: 70 PPAGSPFGAAAPLRPGMPPTMMDPFRKRLLVPQAQPPMPAQ 110
PP P PL P PP P + + P +P +
Sbjct: 1270 PPMMLPLPLQPPLPPPRPPRPPSPPPEPETTDASHPSVPPE 1310
>gi|166999613 FBJ murine osteosarcoma viral oncogene homolog B
isoform 1 [Homo sapiens]
Length = 338
Score = 47.4 bits (111), Expect = 3e-05
Identities = 50/188 (26%), Positives = 70/188 (37%), Gaps = 19/188 (10%)
Query: 25 LGAPPPPAGPGMLPGPALRGPGPAQYQRPGMSPGNRMPMAGLQVGPPAGSPFGAAAPLRP 84
L + PP P +PG + PG + Y G S +G GP P A P RP
Sbjct: 87 LASQPPVVDPYDMPGTSYSTPGMSGYSSGGASGSGGPSTSGTTSGPGPARP-ARARPRRP 145
Query: 85 GMPPTMMDPFRKRLLVPQAQPPMPAQRRGLKRRKMADKVLPQRIRELVPESQAYMDLLAF 144
R+ L P+ + +R +R K+A R REL QA D L
Sbjct: 146 ----------REETLTPEEEEKRRVRR---ERNKLAAAKCRNRRRELTDRLQAETDQLEE 192
Query: 145 ER-KLDQTIARKRMEIQEAIKKPLTQKRKLRIYISNTFSPSKAEGDSAGTAGTPGGTPAG 203
E+ +L+ IA + E + + K +I + G A PG PA
Sbjct: 193 EKAELESEIAELQKEKERLEFVLVAHKPGCKI----PYEEGPGPGPLAEVRDLPGSAPAK 248
Query: 204 DKVASWEL 211
+ SW L
Sbjct: 249 EDGFSWLL 256
>gi|208431824 forkhead box I3 [Homo sapiens]
Length = 420
Score = 47.0 bits (110), Expect = 4e-05
Identities = 33/85 (38%), Positives = 39/85 (45%), Gaps = 13/85 (15%)
Query: 1 MSGRGAGGFPLPPLSPGGGAVAAALGAPPPPAGPGMLPGPALRGPGPAQYQRPGMSPGNR 60
++G G GG P S A AA LGAPPPP PG GP L+ P A G ++
Sbjct: 56 LNGPGVGG----PPSAAAAAAAAYLGAPPPPPPPGAAAGPFLQPPPAA-----GTFGCSQ 106
Query: 61 MPMAGLQVGPPAGSPFGAAAPLRPG 85
P A P +P AAP PG
Sbjct: 107 RPFA----QPAPAAPASPAAPAGPG 127
Score = 32.3 bits (72), Expect = 1.1
Identities = 42/124 (33%), Positives = 47/124 (37%), Gaps = 25/124 (20%)
Query: 3 GRGAGGFPLPPLSPGGGAVAAALGAPPPPAGPGMLPGPALRGP-GPAQYQRPGMSPGN-- 59
G G + P L P A AAA GAP PA R P G A Y P + N
Sbjct: 6 GDNFGVYSQPGLPPPA-ATAAAPGAP-----------PAARAPYGLADYAAPPAAAANPY 53
Query: 60 ---RMPMAGLQVGPPAGSPFGAAAPLRPGMPPTMMDPFRKRLLVPQAQPPMPAQRRGLKR 116
P G GPP+ + AAA L G PP P P QPP A G +
Sbjct: 54 LWLNGPGVG---GPPSAAAAAAAAYL--GAPPPPPPP--GAAAGPFLQPPPAAGTFGCSQ 106
Query: 117 RKMA 120
R A
Sbjct: 107 RPFA 110
>gi|190343021 Sec24-related protein D [Homo sapiens]
Length = 1032
Score = 47.0 bits (110), Expect = 4e-05
Identities = 34/96 (35%), Positives = 38/96 (39%), Gaps = 15/96 (15%)
Query: 1 MSGRGAGGFPLPPLSPGGGAVAAALGAPPPPAG---PGMLPGPALRGPGPAQYQRPGMSP 57
++G GA PLP P G L PPPP P LPG L P Q G
Sbjct: 178 LNGPGASPLPLPMYRPDG------LSGPPPPNAQYQPPPLPGQTLGAGYPPQQANSGPQ- 230
Query: 58 GNRMPMAGLQVGPPAGSPFGAAAPLRPGMPPTMMDP 93
MAG Q+ P G P G A P P +DP
Sbjct: 231 -----MAGAQLSYPGGFPGGPAQMAGPPQPQKKLDP 261
Score = 37.7 bits (86), Expect = 0.025
Identities = 38/122 (31%), Positives = 44/122 (36%), Gaps = 16/122 (13%)
Query: 5 GAGGFPLPPLSPGGGAVAAALGAPPPPAGPGML-PGPALRGPGPAQYQRPGMSP------ 57
G+G P P P G A +L PP P P +L PG + P P PG SP
Sbjct: 133 GSGMAP-PSQGPPGPLSATSLQTPPRPPQPSILQPGSQVLPPPPTTLNGPGASPLPLPMY 191
Query: 58 ------GNRMPMAGLQVGPPAGSPFGAAAPLRPGMPPTMMDPFRKRLLVPQAQPPMPAQR 111
G P A Q P G GA P P + +L P P PAQ
Sbjct: 192 RPDGLSGPPPPNAQYQPPPLPGQTLGAGYP--PQQANSGPQMAGAQLSYPGGFPGGPAQM 249
Query: 112 RG 113
G
Sbjct: 250 AG 251
>gi|38150007 small nuclear ribonucleoprotein polypeptide B/B'
isoform B' [Homo sapiens]
Length = 240
Score = 46.6 bits (109), Expect = 5e-05
Identities = 40/109 (36%), Positives = 44/109 (40%), Gaps = 37/109 (33%)
Query: 4 RGAGGFPLPPLSPGG-GAVAAAL------------------GAPPPPAGPGMLPGPALRG 44
RG GG ++P G G VAAA G PPPP G G P P + G
Sbjct: 132 RGVGGPSQQVMTPQGRGTVAAAAAAATASIAGAPTQYPPGRGGPPPPMGRGA-PPPGMMG 190
Query: 45 PGPAQYQRPGMSPGNRMPMAGLQVGPPAGSPFGAAAPLRPGMPPTMMDP 93
P PG R PM GPP G P G P+ GMPP M P
Sbjct: 191 P----------PPGMRPPM-----GPPMGIPPGRGTPM--GMPPPGMRP 222
Score = 31.6 bits (70), Expect = 1.8
Identities = 35/115 (30%), Positives = 40/115 (34%), Gaps = 18/115 (15%)
Query: 5 GAGGFPLPPLSPGGG-AVAAALGAP---PPPAGPGMLPGPALRGPGPAQYQRPGMSPGNR 60
G PL + G G AA G P P P P L GP GP+Q G
Sbjct: 91 GIARVPLAGAAGGPGIGRAAGRGIPAGVPMPQAPAGLAGPVRGVGGPSQQVMTPQGRGTV 150
Query: 61 MPMAGLQVGPPAGSPF-------GAAAPLRPGMPPT-MMDPFRKRLLVPQAQPPM 107
A AG+P G P+ G PP MM P P +PPM
Sbjct: 151 AAAAAAATASIAGAPTQYPPGRGGPPPPMGRGAPPPGMMGP------PPGMRPPM 199
Score = 30.0 bits (66), Expect = 5.2
Identities = 26/73 (35%), Positives = 30/73 (41%), Gaps = 20/73 (27%)
Query: 5 GAGGFPLPPLSPGGGAVAAALGAPPP----PAGPGM-----------LPGPALRGPGPAQ 49
G GG P PP+ G GA + PPP P GP M +P P +R P P
Sbjct: 171 GRGG-PPPPM--GRGAPPPGMMGPPPGMRPPMGPPMGIPPGRGTPMGMPPPGMRPPPPGM 227
Query: 50 YQRPGMSPGNRMP 62
P PG R P
Sbjct: 228 RGPP--PPGMRPP 238
>gi|4507125 small nuclear ribonucleoprotein polypeptide B/B' isoform
B [Homo sapiens]
Length = 231
Score = 46.6 bits (109), Expect = 5e-05
Identities = 40/109 (36%), Positives = 44/109 (40%), Gaps = 37/109 (33%)
Query: 4 RGAGGFPLPPLSPGG-GAVAAAL------------------GAPPPPAGPGMLPGPALRG 44
RG GG ++P G G VAAA G PPPP G G P P + G
Sbjct: 132 RGVGGPSQQVMTPQGRGTVAAAAAAATASIAGAPTQYPPGRGGPPPPMGRGA-PPPGMMG 190
Query: 45 PGPAQYQRPGMSPGNRMPMAGLQVGPPAGSPFGAAAPLRPGMPPTMMDP 93
P PG R PM GPP G P G P+ GMPP M P
Sbjct: 191 P----------PPGMRPPM-----GPPMGIPPGRGTPM--GMPPPGMRP 222
Score = 31.6 bits (70), Expect = 1.8
Identities = 35/115 (30%), Positives = 40/115 (34%), Gaps = 18/115 (15%)
Query: 5 GAGGFPLPPLSPGGG-AVAAALGAP---PPPAGPGMLPGPALRGPGPAQYQRPGMSPGNR 60
G PL + G G AA G P P P P L GP GP+Q G
Sbjct: 91 GIARVPLAGAAGGPGIGRAAGRGIPAGVPMPQAPAGLAGPVRGVGGPSQQVMTPQGRGTV 150
Query: 61 MPMAGLQVGPPAGSPF-------GAAAPLRPGMPPT-MMDPFRKRLLVPQAQPPM 107
A AG+P G P+ G PP MM P P +PPM
Sbjct: 151 AAAAAAATASIAGAPTQYPPGRGGPPPPMGRGAPPPGMMGP------PPGMRPPM 199
>gi|19924099 synapsin I isoform Ia [Homo sapiens]
Length = 705
Score = 46.6 bits (109), Expect = 5e-05
Identities = 40/124 (32%), Positives = 50/124 (40%), Gaps = 21/124 (16%)
Query: 3 GRGAGG-FPLPPLSPGGGAVAAALGAPP-----PPAGPGMLPGPALRGPGPAQYQRPGMS 56
GRG+ G P P P G + PP PP G PGP + GP QRP
Sbjct: 429 GRGSHGQTPSPGALPLGRQTSQQPAGPPAQQRPPPQGGPPQPGPGPQRQGPPLQQRP--P 486
Query: 57 PGNRMPMAGLQVGPPAGSPFGAAAPLRPGMPPTMMDPFRKRLLVPQAQPPMPAQRRGLKR 116
P + ++GL GPPAGSP P P P +Q P Q +G +
Sbjct: 487 PQGQQHLSGL--GPPAGSPLPQRLPSPTSAPQQ-----------PASQAAPPTQGQGRQS 533
Query: 117 RKMA 120
R +A
Sbjct: 534 RPVA 537
Score = 40.8 bits (94), Expect = 0.003
Identities = 39/116 (33%), Positives = 44/116 (37%), Gaps = 17/116 (14%)
Query: 1 MSGRGA-GGFPLPPL--SPGGGAVAAALGAPPPPAGPGMLPGPALRGPGPAQYQRPGMSP 57
+SG G G PLP SP A A PP G G P GPG RP SP
Sbjct: 493 LSGLGPPAGSPLPQRLPSPTSAPQQPASQAAPPTQGQGRQSRPVAGGPGAPPAARPPASP 552
Query: 58 GNRMPMAGLQVGPPAG----SPFGAAAPLRPGMPPTMMDPFRKRLLVPQAQPPMPA 109
+ Q GPP S G A P G PP ++ P +PP PA
Sbjct: 553 SPQR-----QAGPPQATRQTSVSGPAPPKASGAPPG-----GQQRQGPPQKPPGPA 598
Score = 38.5 bits (88), Expect = 0.015
Identities = 34/131 (25%), Positives = 51/131 (38%), Gaps = 21/131 (16%)
Query: 3 GRGAGGFPLPPLSPGGGAVAAALGAPPPPAGPGMLPGPALRGPGPAQYQRPGMS--PGNR 60
G+ G P P P G A+ P P GP P GPGPA +P ++ P
Sbjct: 584 GQQRQGPPQKPPGPAGPTRQASQAGPVPRTGPPTTQQPRPSGPGPAGRPKPQLAQKPSQD 643
Query: 61 MPMAGLQVGPPAGSPFGAAAPLRPGMPPTMMDPFRKRLLVPQAQPPMPAQRRGLKRRKMA 120
+P PPA + G + ++ + F +P+ PP P+ +
Sbjct: 644 VP-------PPATAAAGGPPHPQLNKSQSLTNAFN----LPEPAPPRPSLSQ-------- 684
Query: 121 DKVLPQRIREL 131
D+V + IR L
Sbjct: 685 DEVKAETIRSL 695
>gi|19924097 synapsin I isoform Ib [Homo sapiens]
Length = 669
Score = 46.6 bits (109), Expect = 5e-05
Identities = 40/124 (32%), Positives = 50/124 (40%), Gaps = 21/124 (16%)
Query: 3 GRGAGG-FPLPPLSPGGGAVAAALGAPP-----PPAGPGMLPGPALRGPGPAQYQRPGMS 56
GRG+ G P P P G + PP PP G PGP + GP QRP
Sbjct: 429 GRGSHGQTPSPGALPLGRQTSQQPAGPPAQQRPPPQGGPPQPGPGPQRQGPPLQQRP--P 486
Query: 57 PGNRMPMAGLQVGPPAGSPFGAAAPLRPGMPPTMMDPFRKRLLVPQAQPPMPAQRRGLKR 116
P + ++GL GPPAGSP P P P +Q P Q +G +
Sbjct: 487 PQGQQHLSGL--GPPAGSPLPQRLPSPTSAPQQ-----------PASQAAPPTQGQGRQS 533
Query: 117 RKMA 120
R +A
Sbjct: 534 RPVA 537
Score = 40.8 bits (94), Expect = 0.003
Identities = 39/116 (33%), Positives = 44/116 (37%), Gaps = 17/116 (14%)
Query: 1 MSGRGA-GGFPLPPL--SPGGGAVAAALGAPPPPAGPGMLPGPALRGPGPAQYQRPGMSP 57
+SG G G PLP SP A A PP G G P GPG RP SP
Sbjct: 493 LSGLGPPAGSPLPQRLPSPTSAPQQPASQAAPPTQGQGRQSRPVAGGPGAPPAARPPASP 552
Query: 58 GNRMPMAGLQVGPPAG----SPFGAAAPLRPGMPPTMMDPFRKRLLVPQAQPPMPA 109
+ Q GPP S G A P G PP ++ P +PP PA
Sbjct: 553 SPQR-----QAGPPQATRQTSVSGPAPPKASGAPPG-----GQQRQGPPQKPPGPA 598
Score = 34.3 bits (77), Expect = 0.28
Identities = 23/73 (31%), Positives = 29/73 (39%), Gaps = 4/73 (5%)
Query: 3 GRGAGGFPLPPLSPGGGAVAAALGAPPPPAGPGMLPGPALRGPGPAQYQRPGMS--PGNR 60
G+ G P P P G A+ P P GP P GPGPA +P ++ P
Sbjct: 584 GQQRQGPPQKPPGPAGPTRQASQAGPVPRTGPPTTQQPRPSGPGPAGRPKPQLAQKPSQD 643
Query: 61 MPMAGLQV--GPP 71
+P GPP
Sbjct: 644 VPPPATAAAGGPP 656
>gi|21237808 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin c2 isoform b [Homo sapiens]
Length = 1130
Score = 46.6 bits (109), Expect = 5e-05
Identities = 41/122 (33%), Positives = 48/122 (39%), Gaps = 12/122 (9%)
Query: 12 PPLSPGGGAVAAALGAPPPPAGPGMLPGPALRGPGPAQYQRP--GMSPGNRMPMAGLQVG 69
PP P G GA PPA G+ PA P PA P + P ++ AG G
Sbjct: 993 PPALPPGSQPIPPTGAAGPPAVHGLAVAPASVVPAPAGSGAPPGSLGPSEQIGQAGSTAG 1052
Query: 70 P----PAGSPFGAAAPLRPGMPPTMMDPFRKRLLVPQAQPP--MPAQRRGLKRRKMADKV 123
P PAG+P A P PG+PP P Q PP MP G +AD
Sbjct: 1053 PQQQQPAGAPQPGAVP--PGVPPP--GPHGPSPFPNQQTPPSMMPGAVPGSGHPGVADPG 1108
Query: 124 LP 125
P
Sbjct: 1109 TP 1110
Score = 34.3 bits (77), Expect = 0.28
Identities = 32/99 (32%), Positives = 35/99 (35%), Gaps = 19/99 (19%)
Query: 7 GGFPLPPLSPGGG------AVA--------AALGAPPPPAGPGMLPGPALRGPGPAQYQR 52
G P+PP G AVA A GAPP GP G A GP Q Q
Sbjct: 999 GSQPIPPTGAAGPPAVHGLAVAPASVVPAPAGSGAPPGSLGPSEQIGQAGSTAGPQQQQP 1058
Query: 53 PGMSPGNRMPMAGLQVGPPAGSPFGAAAPLRPGMPPTMM 91
G +P GP SPF PP+MM
Sbjct: 1059 AGAPQPGAVPPGVPPPGPHGPSPFP-----NQQTPPSMM 1092
>gi|122891870 melanoma inhibitory activity family, member 3 [Homo
sapiens]
Length = 1907
Score = 46.2 bits (108), Expect = 7e-05
Identities = 42/124 (33%), Positives = 54/124 (43%), Gaps = 16/124 (12%)
Query: 1 MSGRGAGGFPLPPL--SPGGGAVAAALGAPPPPA-----GPGMLP---GPALRGPGPAQY 50
M+ +G FP PL +P GG V + PPP GP LP GP +R P +
Sbjct: 1757 MAPKGPPPFPGVPLMSTPMGGPVPPPIRYGPPPQLCGPFGPRPLPPPFGPGMRPPLGLRE 1816
Query: 51 QRPGMSPGNR-MPM--AGLQVGPPAGSPFGAAAPLRPGMPPTMMDPFRKRLLVPQAQPPM 107
PG+ PG R +P+ G G P G+ P +P T + P PQ PP
Sbjct: 1817 FAPGVPPGRRDLPLHPRGFLPGHAPFRPLGSLGPREYFIPGTRLPPPTHG---PQEYPPP 1873
Query: 108 PAQR 111
PA R
Sbjct: 1874 PAVR 1877
Score = 39.3 bits (90), Expect = 0.009
Identities = 39/123 (31%), Positives = 51/123 (41%), Gaps = 12/123 (9%)
Query: 10 PLPPLSPGGGAVAAALGAPPPP-AGPGMLPGPALRGPGPAQYQRPG---MSPGNRMPMAG 65
PLP P A A+ +P P +G + + RG P + G M+P P G
Sbjct: 1710 PLP--HPRWSAEASGKPSPSDPGSGTATMMNSSSRGSSPTRVLDEGKVNMAPKGPPPFPG 1767
Query: 66 LQV-GPPAGSPFGAAAPLRPGMPPTMMDPFRKRLLVPQAQPPMPAQRRGLKRRKMADKVL 124
+ + P G P P+R G PP + PF R L P P P R L R+ A V
Sbjct: 1768 VPLMSTPMGGP--VPPPIRYGPPPQLCGPFGPRPLPP---PFGPGMRPPLGLREFAPGVP 1822
Query: 125 PQR 127
P R
Sbjct: 1823 PGR 1825
>gi|4557317 annexin A11 [Homo sapiens]
Length = 505
Score = 46.2 bits (108), Expect = 7e-05
Identities = 38/113 (33%), Positives = 48/113 (42%), Gaps = 19/113 (16%)
Query: 7 GGFPLPPLSPGGGAVAAALGAPP-PPAGPGMLPGPALRGPGPAQYQRPGMSPGNRM---- 61
GG +P L PG A G PP PP G G P P Y PG +P +RM
Sbjct: 66 GGANMPNLYPG----APGAGYPPVPPGGFGQPPSAQQPVPPYGMYPPPGGNPPSRMPSYP 121
Query: 62 -----PMAGLQVGPPAGSPFGAAAPLRPGMPPTMMDPFRKRLLVPQAQPPMPA 109
P+ G + PP P GA PG PP P + + +P Q P+P+
Sbjct: 122 PYPGAPVPGQPMPPPGQQPPGA----YPGQPPVTY-PGQPPVPLPGQQQPVPS 169
Score = 35.4 bits (80), Expect = 0.12
Identities = 40/125 (32%), Positives = 45/125 (36%), Gaps = 25/125 (20%)
Query: 7 GGFPLPPLSPGGGAVAAALGAPPPPAGP---------------GMLPGPALRGPGP-AQY 50
GG+P P +PGGG A PPP P L G A G
Sbjct: 11 GGYP--PAAPGGGPWGGAAYPPPPSMPPIGLDNVATYAGQFNQDYLSGMAANMSGTFGGA 68
Query: 51 QRPGMSPGNRMPMAGLQVGPPA--GSPFGAAAPLRP-GM--PPTMMDPFRKRLLVPQAQP 105
P + PG P AG PP G P A P+ P GM PP P R P
Sbjct: 69 NMPNLYPG--APGAGYPPVPPGGFGQPPSAQQPVPPYGMYPPPGGNPPSRMPSYPPYPGA 126
Query: 106 PMPAQ 110
P+P Q
Sbjct: 127 PVPGQ 131
Score = 30.8 bits (68), Expect = 3.1
Identities = 16/37 (43%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
Query: 57 PGNRMPMAGLQVGPPAGSPFGAAA-PLRPGMPPTMMD 92
PG P G P G P+G AA P P MPP +D
Sbjct: 4 PGYPPPPGGYPPAAPGGGPWGGAAYPPPPSMPPIGLD 40
>gi|22165433 annexin A11 [Homo sapiens]
Length = 505
Score = 46.2 bits (108), Expect = 7e-05
Identities = 38/113 (33%), Positives = 48/113 (42%), Gaps = 19/113 (16%)
Query: 7 GGFPLPPLSPGGGAVAAALGAPP-PPAGPGMLPGPALRGPGPAQYQRPGMSPGNRM---- 61
GG +P L PG A G PP PP G G P P Y PG +P +RM
Sbjct: 66 GGANMPNLYPG----APGAGYPPVPPGGFGQPPSAQQPVPPYGMYPPPGGNPPSRMPSYP 121
Query: 62 -----PMAGLQVGPPAGSPFGAAAPLRPGMPPTMMDPFRKRLLVPQAQPPMPA 109
P+ G + PP P GA PG PP P + + +P Q P+P+
Sbjct: 122 PYPGAPVPGQPMPPPGQQPPGA----YPGQPPVTY-PGQPPVPLPGQQQPVPS 169
Score = 35.4 bits (80), Expect = 0.12
Identities = 40/125 (32%), Positives = 45/125 (36%), Gaps = 25/125 (20%)
Query: 7 GGFPLPPLSPGGGAVAAALGAPPPPAGP---------------GMLPGPALRGPGP-AQY 50
GG+P P +PGGG A PPP P L G A G
Sbjct: 11 GGYP--PAAPGGGPWGGAAYPPPPSMPPIGLDNVATYAGQFNQDYLSGMAANMSGTFGGA 68
Query: 51 QRPGMSPGNRMPMAGLQVGPPA--GSPFGAAAPLRP-GM--PPTMMDPFRKRLLVPQAQP 105
P + PG P AG PP G P A P+ P GM PP P R P
Sbjct: 69 NMPNLYPG--APGAGYPPVPPGGFGQPPSAQQPVPPYGMYPPPGGNPPSRMPSYPPYPGA 126
Query: 106 PMPAQ 110
P+P Q
Sbjct: 127 PVPGQ 131
Score = 30.8 bits (68), Expect = 3.1
Identities = 16/37 (43%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
Query: 57 PGNRMPMAGLQVGPPAGSPFGAAA-PLRPGMPPTMMD 92
PG P G P G P+G AA P P MPP +D
Sbjct: 4 PGYPPPPGGYPPAAPGGGPWGGAAYPPPPSMPPIGLD 40
>gi|22165431 annexin A11 [Homo sapiens]
Length = 505
Score = 46.2 bits (108), Expect = 7e-05
Identities = 38/113 (33%), Positives = 48/113 (42%), Gaps = 19/113 (16%)
Query: 7 GGFPLPPLSPGGGAVAAALGAPP-PPAGPGMLPGPALRGPGPAQYQRPGMSPGNRM---- 61
GG +P L PG A G PP PP G G P P Y PG +P +RM
Sbjct: 66 GGANMPNLYPG----APGAGYPPVPPGGFGQPPSAQQPVPPYGMYPPPGGNPPSRMPSYP 121
Query: 62 -----PMAGLQVGPPAGSPFGAAAPLRPGMPPTMMDPFRKRLLVPQAQPPMPA 109
P+ G + PP P GA PG PP P + + +P Q P+P+
Sbjct: 122 PYPGAPVPGQPMPPPGQQPPGA----YPGQPPVTY-PGQPPVPLPGQQQPVPS 169
Score = 35.4 bits (80), Expect = 0.12
Identities = 40/125 (32%), Positives = 45/125 (36%), Gaps = 25/125 (20%)
Query: 7 GGFPLPPLSPGGGAVAAALGAPPPPAGP---------------GMLPGPALRGPGP-AQY 50
GG+P P +PGGG A PPP P L G A G
Sbjct: 11 GGYP--PAAPGGGPWGGAAYPPPPSMPPIGLDNVATYAGQFNQDYLSGMAANMSGTFGGA 68
Query: 51 QRPGMSPGNRMPMAGLQVGPPA--GSPFGAAAPLRP-GM--PPTMMDPFRKRLLVPQAQP 105
P + PG P AG PP G P A P+ P GM PP P R P
Sbjct: 69 NMPNLYPG--APGAGYPPVPPGGFGQPPSAQQPVPPYGMYPPPGGNPPSRMPSYPPYPGA 126
Query: 106 PMPAQ 110
P+P Q
Sbjct: 127 PVPGQ 131
Score = 30.8 bits (68), Expect = 3.1
Identities = 16/37 (43%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
Query: 57 PGNRMPMAGLQVGPPAGSPFGAAA-PLRPGMPPTMMD 92
PG P G P G P+G AA P P MPP +D
Sbjct: 4 PGYPPPPGGYPPAAPGGGPWGGAAYPPPPSMPPIGLD 40
>gi|21237805 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin c2 isoform a [Homo sapiens]
Length = 1214
Score = 46.2 bits (108), Expect = 7e-05
Identities = 31/83 (37%), Positives = 37/83 (44%), Gaps = 8/83 (9%)
Query: 12 PPLSPGGGAVAAALGAPPPPAGPGMLPGPALRGPGPAQYQRP--GMSPGNRMPMAGLQVG 69
PP P G GA PPA G+ PA P PA P + P ++ AG G
Sbjct: 962 PPALPPGSQPIPPTGAAGPPAVHGLAVAPASVVPAPAGSGAPPGSLGPSEQIGQAGSTAG 1021
Query: 70 P----PAGSPFGAAAPLRPGMPP 88
P PAG+P A P PG+PP
Sbjct: 1022 PQQQQPAGAPQPGAVP--PGVPP 1042
Score = 38.1 bits (87), Expect = 0.019
Identities = 34/98 (34%), Positives = 41/98 (41%), Gaps = 13/98 (13%)
Query: 2 SGRGAGGFPLPPLSPGGGAVAAA-------LGAPPPPAGPGMLPGPALRGPGPAQYQR-- 52
+G GA L P G A + A GAP P A P +P P GP P Q+
Sbjct: 998 AGSGAPPGSLGPSEQIGQAGSTAGPQQQQPAGAPQPGAVPPGVPPPGPHGPSPFPNQQTP 1057
Query: 53 PGMSPGNRMPMA---GLQVGPPAGSPFGAAAPLRPGMP 87
P M PG +P + G+ P G PFG P P P
Sbjct: 1058 PSMMPG-AVPGSGHPGVAGNAPLGLPFGMPPPPPPPAP 1094
Score = 34.3 bits (77), Expect = 0.28
Identities = 32/99 (32%), Positives = 35/99 (35%), Gaps = 19/99 (19%)
Query: 7 GGFPLPPLSPGGG------AVA--------AALGAPPPPAGPGMLPGPALRGPGPAQYQR 52
G P+PP G AVA A GAPP GP G A GP Q Q
Sbjct: 968 GSQPIPPTGAAGPPAVHGLAVAPASVVPAPAGSGAPPGSLGPSEQIGQAGSTAGPQQQQP 1027
Query: 53 PGMSPGNRMPMAGLQVGPPAGSPFGAAAPLRPGMPPTMM 91
G +P GP SPF PP+MM
Sbjct: 1028 AGAPQPGAVPPGVPPPGPHGPSPFP-----NQQTPPSMM 1061
Score = 32.7 bits (73), Expect = 0.80
Identities = 27/95 (28%), Positives = 35/95 (36%), Gaps = 13/95 (13%)
Query: 11 LPPLSPGGGAVAAALGAP----------PPPAGPGMLPGPALRGPGPAQYQRPGMSPGNR 60
+P PG G A AP PPP P ++P +L P G+
Sbjct: 1061 MPGAVPGSGHPGVAGNAPLGLPFGMPPPPPPPAPSIIPFGSLADSISINLPAPPNLHGHH 1120
Query: 61 --MPMAGLQVGPPAGSPFGAAAPLRPGMPPTMMDP 93
+P A + PP P A PL P +P T P
Sbjct: 1121 HHLPFAPGTL-PPPNLPVSMANPLHPNLPATTTMP 1154
>gi|194363725 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin c2 isoform c [Homo sapiens]
Length = 1152
Score = 46.2 bits (108), Expect = 7e-05
Identities = 31/83 (37%), Positives = 37/83 (44%), Gaps = 8/83 (9%)
Query: 12 PPLSPGGGAVAAALGAPPPPAGPGMLPGPALRGPGPAQYQRP--GMSPGNRMPMAGLQVG 69
PP P G GA PPA G+ PA P PA P + P ++ AG G
Sbjct: 993 PPALPPGSQPIPPTGAAGPPAVHGLAVAPASVVPAPAGSGAPPGSLGPSEQIGQAGSTAG 1052
Query: 70 P----PAGSPFGAAAPLRPGMPP 88
P PAG+P A P PG+PP
Sbjct: 1053 PQQQQPAGAPQPGAVP--PGVPP 1073
Score = 34.3 bits (77), Expect = 0.28
Identities = 32/99 (32%), Positives = 35/99 (35%), Gaps = 19/99 (19%)
Query: 7 GGFPLPPLSPGGG------AVA--------AALGAPPPPAGPGMLPGPALRGPGPAQYQR 52
G P+PP G AVA A GAPP GP G A GP Q Q
Sbjct: 999 GSQPIPPTGAAGPPAVHGLAVAPASVVPAPAGSGAPPGSLGPSEQIGQAGSTAGPQQQQP 1058
Query: 53 PGMSPGNRMPMAGLQVGPPAGSPFGAAAPLRPGMPPTMM 91
G +P GP SPF PP+MM
Sbjct: 1059 AGAPQPGAVPPGVPPPGPHGPSPFP-----NQQTPPSMM 1092
Score = 33.1 bits (74), Expect = 0.62
Identities = 38/116 (32%), Positives = 45/116 (38%), Gaps = 11/116 (9%)
Query: 2 SGRGAGGFPLPPLSPGGGAVAAA-------LGAPPPPAGPGMLPGPALRGPGPAQYQR-- 52
+G GA L P G A + A GAP P A P +P P GP P Q+
Sbjct: 1029 AGSGAPPGSLGPSEQIGQAGSTAGPQQQQPAGAPQPGAVPPGVPPPGPHGPSPFPNQQTP 1088
Query: 53 PGMSPGNRMPMAGLQVGPPAGSPFGAAAPLRPGMPPTMMDPFRKRLLVPQAQPPMP 108
P M PG +P +G G A SP AA +P P L P P P
Sbjct: 1089 PSMMPG-AVPGSG-HPGVAAQSPAIVAAVQGNLLPSASPLPDPGTPLPPDPTAPSP 1142
>gi|110832843 TBP-associated factor 4 [Homo sapiens]
Length = 1085
Score = 45.8 bits (107), Expect = 9e-05
Identities = 46/129 (35%), Positives = 48/129 (37%), Gaps = 29/129 (22%)
Query: 6 AGGFPLP--PLSPGGGAVAAALGAPPPPAGPGMLPGPA---LRGPGPAQ----------- 49
AG P P P P G A AA P P GPG PGP GPG AQ
Sbjct: 148 AGPEPAPAGPAKPAGPAALAARAGPGPGPGPGPGPGPGPGKPAGPGAAQTLNGSAALLNS 207
Query: 50 --YQRPGMSPGNRMPMAGLQVGPPAG-------SPF-GAAAPLRPGMPPTMMDPFRKRLL 99
P +S N P A L + PA PF GAAAP P P P
Sbjct: 208 HHAAAPAVSLVNNGPAALLPLPKPAAPGTVIQTPPFVGAAAPPAPAAP---SPPAAPAPA 264
Query: 100 VPQAQPPMP 108
P A PP P
Sbjct: 265 APAAAPPPP 273
Score = 45.1 bits (105), Expect = 2e-04
Identities = 36/98 (36%), Positives = 43/98 (43%), Gaps = 8/98 (8%)
Query: 1 MSGRGAGGFPLPPLSPGGGAVAAALGAPPPPAGPGMLPGPALRGPGPAQYQRPGMSPGNR 60
+SG AG P +P GA AA PPPAG G + PGP +RP + G
Sbjct: 63 VSGSPAGAAGAGPAAPAEGAPGAA--PEPPPAGRARPGGGGPQRPGPPSPRRPLVPAGPA 120
Query: 61 MPMAGLQVGPPAGS-----PFGAAAPLRPGMPPTMMDP 93
P A L+ PP GS P AAA + G P P
Sbjct: 121 PPAAKLR-PPPEGSAGSCAPVPAAAAVAAGPEPAPAGP 157
Score = 40.8 bits (94), Expect = 0.003
Identities = 27/72 (37%), Positives = 29/72 (40%), Gaps = 9/72 (12%)
Query: 15 SPGGGAVAAALGAPPPPAGPGMLPGPAL----RGPGPAQYQRPGMSPGNRMPMAGLQVGP 70
+P A A A G P PAGP GPA GPGP PG PG G GP
Sbjct: 138 APVPAAAAVAAGPEPAPAGPAKPAGPAALAARAGPGPGPGPGPGPGPG-----PGKPAGP 192
Query: 71 PAGSPFGAAAPL 82
A +A L
Sbjct: 193 GAAQTLNGSAAL 204
Score = 40.0 bits (92), Expect = 0.005
Identities = 37/119 (31%), Positives = 44/119 (36%), Gaps = 18/119 (15%)
Query: 6 AGGFPLPPLSPGGGAVAAALGAPPP----PAGPGMLPGPALRGPGPAQYQRPGMSPGNRM 61
A P P + GG+ AA AP P PAG PGP PA PG+
Sbjct: 294 APAVPPPAAAQNGGSAGAA-PAPAPAAGGPAGVSGQPGPGAAAAAPA----PGVKA--ES 346
Query: 62 PMAGLQVGPPAGSPFGAAAPLRPG----MPPTMMDPFRKRLLVPQAQPPMPAQRRGLKR 116
P +Q PPA A+ P + PTM VP PP P GL +
Sbjct: 347 PKRVVQAAPPAAQTLAASGPASTAASMVIGPTMQGALPSPAAVP---PPAPGTPTGLPK 402
Score = 39.3 bits (90), Expect = 0.009
Identities = 30/91 (32%), Positives = 32/91 (35%), Gaps = 13/91 (14%)
Query: 3 GRGAGGFPLPPLSPGGGAVAAALGAPPPPAGPGMLPGPALRGPGPAQYQRPGMSPGNRMP 62
G A P P P A AA APPPP P PA RP P P
Sbjct: 245 GAAAPPAPAAPSPPAAPAPAAPAAAPPPPP------------PAPATLARPPGHPAG-PP 291
Query: 63 MAGLQVGPPAGSPFGAAAPLRPGMPPTMMDP 93
A V PPA + G +A P P P
Sbjct: 292 TAAPAVPPPAAAQNGGSAGAAPAPAPAAGGP 322
>gi|4507127 small nuclear ribonucleoprotein polypeptide C [Homo
sapiens]
Length = 159
Score = 45.4 bits (106), Expect = 1e-04
Identities = 34/97 (35%), Positives = 43/97 (44%), Gaps = 15/97 (15%)
Query: 11 LPPLSPGGGAVAAALGAPPP----PAGPGMLPGPALRGPGPAQYQRPGMSPGNRMPMAGL 66
+PP A A+ PPP P PGM+P P + GP P M P P +
Sbjct: 62 IPPTPFSAPPPAGAMIPPPPSLPGPPRPGMMPAPHMGGPP----MMPMMGP---PPPGMM 114
Query: 67 QVGPPAG--SPFGAAAPLRPGMPPTMMDPFRKRLLVP 101
VGP G P G P+ PG P MM P + ++VP
Sbjct: 115 PVGPAPGMRPPMGGHMPMMPG--PPMMRPPARPMMVP 149
>gi|55741675 hypothetical protein LOC22889 [Homo sapiens]
Length = 614
Score = 45.1 bits (105), Expect = 2e-04
Identities = 39/123 (31%), Positives = 51/123 (41%), Gaps = 24/123 (19%)
Query: 10 PLPPLSPGGGAVAAALGAPPP------PAG-PGMLPGPALRGPGPAQYQRPGMSP-GNRM 61
P PP P G + PPP P G P ++P PG G+ P +
Sbjct: 350 PQPPYYPSNGYQSGYPVVPPPQQPVQPPYGVPSIVPPAVSLAPGVLPALPTGVPPVPTQY 409
Query: 62 PMAGLQVGPPA-------GSPFGAAAPLRPGMPPTMMDPFRKRLLVPQAQPPMPAQRRGL 114
P+ QV PPA G PF AAP++ +P PQ QPP+P+Q +
Sbjct: 410 PIT--QVQPPASTGQSPMGGPFIPAAPVKTALPAGPQPQ-------PQPQPPLPSQPQAQ 460
Query: 115 KRR 117
KRR
Sbjct: 461 KRR 463
>gi|7706469 Kruppel-like factor [Homo sapiens]
Length = 355
Score = 44.7 bits (104), Expect = 2e-04
Identities = 38/107 (35%), Positives = 41/107 (38%), Gaps = 23/107 (21%)
Query: 4 RGAGGFPLPPLSPGGGAVAAALGAPPPPAGPGMLPGPALRGPGPAQYQRPGMSPGNRMPM 63
RG GG P PP P P GP LP P R A + P PG P
Sbjct: 161 RGPGGRPPPPPDT----------PPLSPDGPARLPAPGPR----ASFPPPFGGPGFGAPG 206
Query: 64 AGLQVGPPAGSPFG-----AAAPLRPGMPPTMMDPFRKRLLVPQAQP 105
GL PPA FG AAA G+ P P + LL P A P
Sbjct: 207 PGLHYAPPAPPAFGLFDDAAAAAAALGLAP----PAARGLLTPPASP 249
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.319 0.137 0.412
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 24,223,968
Number of Sequences: 37866
Number of extensions: 1496601
Number of successful extensions: 14586
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 152
Number of HSP's successfully gapped in prelim test: 929
Number of HSP's that attempted gapping in prelim test: 9157
Number of HSP's gapped (non-prelim): 4644
length of query: 510
length of database: 18,247,518
effective HSP length: 107
effective length of query: 403
effective length of database: 14,195,856
effective search space: 5720929968
effective search space used: 5720929968
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.