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Search of human proteins with 147903070
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|147903070 surfactant protein A1 [Homo sapiens]
(245 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|147903070 surfactant protein A1 [Homo sapiens] 526 e-150
gi|38888175 surfactant, pulmonary-associated protein A1B [Homo s... 526 e-150
gi|148886696 surfactant protein A2 [Homo sapiens] 508 e-144
gi|146149162 surfactant, pulmonary-associated protein A2 [Homo s... 508 e-144
gi|61699226 pulmonary surfactant-associated protein D precursor ... 144 9e-35
gi|4557739 soluble mannose-binding lectin precursor [Homo sapiens] 139 2e-33
gi|18641360 collectin sub-family member 12 [Homo sapiens] 102 3e-22
gi|5453619 collectin sub-family member 10 [Homo sapiens] 101 7e-22
gi|13128972 collectin sub-family member 11 isoform a [Homo sapiens] 100 1e-21
gi|15890086 type IV collagen alpha 5 isoform 2 precursor [Homo s... 94 8e-20
gi|4502955 type IV collagen alpha 5 isoform 1 precursor [Homo sa... 94 8e-20
gi|15890088 type IV collagen alpha 5 isoform 3 precursor [Homo s... 94 8e-20
gi|100913220 alpha 1 type XVI collagen precursor [Homo sapiens] 92 5e-19
gi|40805823 collagen, type XXII, alpha 1 [Homo sapiens] 89 5e-18
gi|194294532 alpha 1 type XIII collagen isoform 20 [Homo sapiens] 88 8e-18
gi|22027607 alpha 1 type XIII collagen isoform 18 [Homo sapiens] 88 8e-18
gi|22027605 alpha 1 type XIII collagen isoform 17 [Homo sapiens] 88 8e-18
gi|22027603 alpha 1 type XIII collagen isoform 16 [Homo sapiens] 88 8e-18
gi|22027599 alpha 1 type XIII collagen isoform 14 [Homo sapiens] 88 8e-18
gi|22027595 alpha 1 type XIII collagen isoform 12 [Homo sapiens] 88 8e-18
gi|22027593 alpha 1 type XIII collagen isoform 11 [Homo sapiens] 88 8e-18
gi|22027591 alpha 1 type XIII collagen isoform 10 [Homo sapiens] 88 8e-18
gi|22027589 alpha 1 type XIII collagen isoform 9 [Homo sapiens] 88 8e-18
gi|22027583 alpha 1 type XIII collagen isoform 7 [Homo sapiens] 88 8e-18
gi|22027577 alpha 1 type XIII collagen isoform 5 [Homo sapiens] 88 8e-18
gi|22027574 alpha 1 type XIII collagen isoform 4 [Homo sapiens] 88 8e-18
gi|22027571 alpha 1 type XIII collagen isoform 3 [Homo sapiens] 88 8e-18
gi|22027568 alpha 1 type XIII collagen isoform 2 [Homo sapiens] 88 8e-18
gi|22027565 alpha 1 type XIII collagen isoform 1 [Homo sapiens] 88 8e-18
gi|22027587 alpha 1 type XIII collagen isoform 8 [Homo sapiens] 88 8e-18
>gi|147903070 surfactant protein A1 [Homo sapiens]
Length = 245
Score = 526 bits (1354), Expect = e-150
Identities = 245/245 (100%), Positives = 245/245 (100%)
Query: 1 MWLCPLALNLILMAASGAVCEVKDVCVGSPGIPGTPGSHGLPGRDGRDGLKGDPGPPGPM 60
MWLCPLALNLILMAASGAVCEVKDVCVGSPGIPGTPGSHGLPGRDGRDGLKGDPGPPGPM
Sbjct: 1 MWLCPLALNLILMAASGAVCEVKDVCVGSPGIPGTPGSHGLPGRDGRDGLKGDPGPPGPM 60
Query: 61 GPPGEMPCPPGNDGLPGAPGIPGECGEKGEPGERGPPGLPAHLDEELQATLHDFRHQILQ 120
GPPGEMPCPPGNDGLPGAPGIPGECGEKGEPGERGPPGLPAHLDEELQATLHDFRHQILQ
Sbjct: 61 GPPGEMPCPPGNDGLPGAPGIPGECGEKGEPGERGPPGLPAHLDEELQATLHDFRHQILQ 120
Query: 121 TRGALSLQGSIMTVGEKVFSSNGQSITFDAIQEACARAGGRIAVPRNPEENEAIASFVKK 180
TRGALSLQGSIMTVGEKVFSSNGQSITFDAIQEACARAGGRIAVPRNPEENEAIASFVKK
Sbjct: 121 TRGALSLQGSIMTVGEKVFSSNGQSITFDAIQEACARAGGRIAVPRNPEENEAIASFVKK 180
Query: 181 YNTYAYVGLTEGPSPGDFRYSDGTPVNYTNWYRGEPAGRGKEQCVEMYTDGQWNDRNCLY 240
YNTYAYVGLTEGPSPGDFRYSDGTPVNYTNWYRGEPAGRGKEQCVEMYTDGQWNDRNCLY
Sbjct: 181 YNTYAYVGLTEGPSPGDFRYSDGTPVNYTNWYRGEPAGRGKEQCVEMYTDGQWNDRNCLY 240
Query: 241 SRLTI 245
SRLTI
Sbjct: 241 SRLTI 245
>gi|38888175 surfactant, pulmonary-associated protein A1B [Homo
sapiens]
Length = 248
Score = 526 bits (1354), Expect = e-150
Identities = 245/245 (100%), Positives = 245/245 (100%)
Query: 1 MWLCPLALNLILMAASGAVCEVKDVCVGSPGIPGTPGSHGLPGRDGRDGLKGDPGPPGPM 60
MWLCPLALNLILMAASGAVCEVKDVCVGSPGIPGTPGSHGLPGRDGRDGLKGDPGPPGPM
Sbjct: 1 MWLCPLALNLILMAASGAVCEVKDVCVGSPGIPGTPGSHGLPGRDGRDGLKGDPGPPGPM 60
Query: 61 GPPGEMPCPPGNDGLPGAPGIPGECGEKGEPGERGPPGLPAHLDEELQATLHDFRHQILQ 120
GPPGEMPCPPGNDGLPGAPGIPGECGEKGEPGERGPPGLPAHLDEELQATLHDFRHQILQ
Sbjct: 61 GPPGEMPCPPGNDGLPGAPGIPGECGEKGEPGERGPPGLPAHLDEELQATLHDFRHQILQ 120
Query: 121 TRGALSLQGSIMTVGEKVFSSNGQSITFDAIQEACARAGGRIAVPRNPEENEAIASFVKK 180
TRGALSLQGSIMTVGEKVFSSNGQSITFDAIQEACARAGGRIAVPRNPEENEAIASFVKK
Sbjct: 121 TRGALSLQGSIMTVGEKVFSSNGQSITFDAIQEACARAGGRIAVPRNPEENEAIASFVKK 180
Query: 181 YNTYAYVGLTEGPSPGDFRYSDGTPVNYTNWYRGEPAGRGKEQCVEMYTDGQWNDRNCLY 240
YNTYAYVGLTEGPSPGDFRYSDGTPVNYTNWYRGEPAGRGKEQCVEMYTDGQWNDRNCLY
Sbjct: 181 YNTYAYVGLTEGPSPGDFRYSDGTPVNYTNWYRGEPAGRGKEQCVEMYTDGQWNDRNCLY 240
Query: 241 SRLTI 245
SRLTI
Sbjct: 241 SRLTI 245
>gi|148886696 surfactant protein A2 [Homo sapiens]
Length = 248
Score = 508 bits (1309), Expect = e-144
Identities = 237/245 (96%), Positives = 240/245 (97%)
Query: 1 MWLCPLALNLILMAASGAVCEVKDVCVGSPGIPGTPGSHGLPGRDGRDGLKGDPGPPGPM 60
MWLCPLAL LILMAASGA CEVKDVCVGSPGIPGTPGSHGLPGRDGRDG+KGDPGPPGPM
Sbjct: 1 MWLCPLALTLILMAASGAACEVKDVCVGSPGIPGTPGSHGLPGRDGRDGVKGDPGPPGPM 60
Query: 61 GPPGEMPCPPGNDGLPGAPGIPGECGEKGEPGERGPPGLPAHLDEELQATLHDFRHQILQ 120
GPPGE PCPPGN+GLPGAPG+PGE GEKGE GERGPPGLPAHLDEELQATLHDFRHQILQ
Sbjct: 61 GPPGETPCPPGNNGLPGAPGVPGERGEKGEAGERGPPGLPAHLDEELQATLHDFRHQILQ 120
Query: 121 TRGALSLQGSIMTVGEKVFSSNGQSITFDAIQEACARAGGRIAVPRNPEENEAIASFVKK 180
TRGALSLQGSIMTVGEKVFSSNGQSITFDAIQEACARAGGRIAVPRNPEENEAIASFVKK
Sbjct: 121 TRGALSLQGSIMTVGEKVFSSNGQSITFDAIQEACARAGGRIAVPRNPEENEAIASFVKK 180
Query: 181 YNTYAYVGLTEGPSPGDFRYSDGTPVNYTNWYRGEPAGRGKEQCVEMYTDGQWNDRNCLY 240
YNTYAYVGLTEGPSPGDFRYSDGTPVNYTNWYRGEPAGRGKEQCVEMYTDGQWNDRNCLY
Sbjct: 181 YNTYAYVGLTEGPSPGDFRYSDGTPVNYTNWYRGEPAGRGKEQCVEMYTDGQWNDRNCLY 240
Query: 241 SRLTI 245
SRLTI
Sbjct: 241 SRLTI 245
>gi|146149162 surfactant, pulmonary-associated protein A2 [Homo
sapiens]
Length = 248
Score = 508 bits (1309), Expect = e-144
Identities = 237/245 (96%), Positives = 240/245 (97%)
Query: 1 MWLCPLALNLILMAASGAVCEVKDVCVGSPGIPGTPGSHGLPGRDGRDGLKGDPGPPGPM 60
MWLCPLAL LILMAASGA CEVKDVCVGSPGIPGTPGSHGLPGRDGRDG+KGDPGPPGPM
Sbjct: 1 MWLCPLALTLILMAASGAACEVKDVCVGSPGIPGTPGSHGLPGRDGRDGVKGDPGPPGPM 60
Query: 61 GPPGEMPCPPGNDGLPGAPGIPGECGEKGEPGERGPPGLPAHLDEELQATLHDFRHQILQ 120
GPPGE PCPPGN+GLPGAPG+PGE GEKGE GERGPPGLPAHLDEELQATLHDFRHQILQ
Sbjct: 61 GPPGETPCPPGNNGLPGAPGVPGERGEKGEAGERGPPGLPAHLDEELQATLHDFRHQILQ 120
Query: 121 TRGALSLQGSIMTVGEKVFSSNGQSITFDAIQEACARAGGRIAVPRNPEENEAIASFVKK 180
TRGALSLQGSIMTVGEKVFSSNGQSITFDAIQEACARAGGRIAVPRNPEENEAIASFVKK
Sbjct: 121 TRGALSLQGSIMTVGEKVFSSNGQSITFDAIQEACARAGGRIAVPRNPEENEAIASFVKK 180
Query: 181 YNTYAYVGLTEGPSPGDFRYSDGTPVNYTNWYRGEPAGRGKEQCVEMYTDGQWNDRNCLY 240
YNTYAYVGLTEGPSPGDFRYSDGTPVNYTNWYRGEPAGRGKEQCVEMYTDGQWNDRNCLY
Sbjct: 181 YNTYAYVGLTEGPSPGDFRYSDGTPVNYTNWYRGEPAGRGKEQCVEMYTDGQWNDRNCLY 240
Query: 241 SRLTI 245
SRLTI
Sbjct: 241 SRLTI 245
>gi|61699226 pulmonary surfactant-associated protein D precursor
[Homo sapiens]
Length = 375
Score = 144 bits (362), Expect = 9e-35
Identities = 82/226 (36%), Positives = 120/226 (53%), Gaps = 7/226 (3%)
Query: 27 VGSPGIPGTPGSHGLPGRDGRDGLKGDPGPPGPMGPPGEMPC--PPGNDGLPGAPGIPGE 84
VG+PG+ G+ G+ GL G G G+ G+ G PG G G P G+ G G PG+ G+
Sbjct: 147 VGAPGMQGSAGARGLAGPKGERGVPGERGVPGNTGAAGSAGAMGPQGSPGARGPPGLKGD 206
Query: 85 CGEKGEPGERGPPGLP--AHLDEELQATLHDFRH--QILQTRGALSLQGSIMTVGEKVFS 140
G G+ G +G GLP A L ++++A +H + L + +VGEK+F
Sbjct: 207 KGIPGDKGAKGESGLPDVASLRQQVEALQGQVQHLQAAFSQYKKVELFPNGQSVGEKIFK 266
Query: 141 SNGQSITFDAIQEACARAGGRIAVPRNPEENEAIASFVKKYNTYAYVGLTEGPSPGDFRY 200
+ G F Q C +AGG++A PR+ EN A+ V N A++ +T+ + G F Y
Sbjct: 267 TAGFVKPFTEAQLLCTQAGGQLASPRSAAENAALQQLVVAKNEAAFLSMTDSKTEGKFTY 326
Query: 201 SDGTPVNYTNWYRGEP-AGRGKEQCVEMYTDGQWNDRNCLYSRLTI 245
G + Y+NW GEP G E CVE++T+G+WNDR C RL +
Sbjct: 327 PTGESLVYSNWAPGEPNDDGGSEDCVEIFTNGKWNDRACGEKRLVV 372
Score = 61.6 bits (148), Expect = 6e-10
Identities = 38/104 (36%), Positives = 52/104 (50%), Gaps = 8/104 (7%)
Query: 5 PLALNLILMAASGAVCEVKDVCVGSPGIPGTPGSHGLPGRDGRDGLKGDPGPPGPMGPPG 64
P A L++ ++ + +D G G G G GLPG G+ G+ G GP GP G G
Sbjct: 32 PSACTLVMCSSVESGLPGRDGRDGREGPRGEKGDPGLPGAAGQAGMPGQAGPVGPKGDNG 91
Query: 65 EM--PCPPGN---DGLPGAPGIPGECGEKGEPGER---GPPGLP 100
+ P P G+ G PG PG+PG G +G G++ GP G P
Sbjct: 92 SVGEPGPKGDTGPSGPPGPPGVPGPAGREGPLGKQGNIGPQGKP 135
Score = 59.7 bits (143), Expect = 2e-09
Identities = 37/76 (48%), Positives = 40/76 (52%), Gaps = 10/76 (13%)
Query: 40 GLPGRDGRDGL------KGDPGPPGPMGPPGEMPC---PPGNDGLPGAPGIPGECGEKGE 90
GLPGRDGRDG KGDPG PG G G MP P G G G+ G PG G+ G
Sbjct: 46 GLPGRDGRDGREGPRGEKGDPGLPGAAGQAG-MPGQAGPVGPKGDNGSVGEPGPKGDTGP 104
Query: 91 PGERGPPGLPAHLDEE 106
G GPPG+P E
Sbjct: 105 SGPPGPPGVPGPAGRE 120
>gi|4557739 soluble mannose-binding lectin precursor [Homo sapiens]
Length = 248
Score = 139 bits (351), Expect = 2e-33
Identities = 88/251 (35%), Positives = 127/251 (50%), Gaps = 25/251 (9%)
Query: 5 PLALNLILMAASGAVCEVKDVCVGSPGIPG--TPGSHGLPGRDGRDGLKGDPGPPGP--- 59
PL L ++ A+ +D P + +PG +G PG+DGRDG KG+ G PG
Sbjct: 8 PLLLLSMVAASYSETVTCEDAQKTCPAVIACSSPGINGFPGKDGRDGTKGEKGEPGQGLR 67
Query: 60 --MGPPGEMPCPPGNDGLPGAPGIPGECGEKGEPGER--GPPGLPAHLDEELQATLHDFR 115
GPPG++ PPGN PG G PG G+KG+PG+ G L A + LQ + +
Sbjct: 68 GLQGPPGKLG-PPGN---PGPSGSPGPKGQKGDPGKSPDGDSSLAASERKALQTEMARIK 123
Query: 116 HQILQTRGALSLQGSIMTVGEKVFSSNGQSITFDAIQEACARAGGRIAVPRNPEENEAIA 175
+ + G VG K F +NG+ +TF+ ++ C + +A PRN EN AI
Sbjct: 124 KWLTFSLGK--------QVGNKFFLTNGEIMTFEKVKALCVKFQASVATPRNAAENGAIQ 175
Query: 176 SFVKKYNTYAYVGLTEGPSPGDFRYSDGTPVNYTNWYRGEPAGRGK-EQCVEMYTDGQWN 234
+ +K+ A++G+T+ + G F G + YTNW GEP G E CV + +GQWN
Sbjct: 176 NLIKE---EAFLGITDEKTEGQFVDLTGNRLTYTNWNEGEPNNAGSDEDCVLLLKNGQWN 232
Query: 235 DRNCLYSRLTI 245
D C S L +
Sbjct: 233 DVPCSTSHLAV 243
>gi|18641360 collectin sub-family member 12 [Homo sapiens]
Length = 742
Score = 102 bits (254), Expect = 3e-22
Identities = 72/235 (30%), Positives = 96/235 (40%), Gaps = 36/235 (15%)
Query: 28 GSPGIPGTPGSHGLPGRDGRDGLKGDPGPPGP---------MGPPGEM--------PCPP 70
GS G G GS G PG+ G G GDPGPPGP GPPG P P
Sbjct: 500 GSKGSQGPKGSRGSPGKPGPQGPSGDPGPPGPPGKEGLPGPQGPPGFQGLQGTVGEPGVP 559
Query: 71 GNDGLPGAPGIPGECGEKGEPGERGPPG--LPAHLDEELQATLHDFRHQILQTRGALSLQ 128
G GLPG PG+PG G KG PG GP G +P L E D
Sbjct: 560 GPRGLPGLPGVPGMPGPKGPPGPPGPSGAVVPLALQNEPTPAPEDN-----------GCP 608
Query: 129 GSIMTVGEKVFSSNGQSITFDAIQEACARAGGRIAVPRNPEENEAIASFVKKYNTYAYVG 188
+K + + + F+ + C + EE + I + ++ ++G
Sbjct: 609 PHWKNFTDKCYYFSVEKEIFEDAKLFCEDKSSHLVFINTREEQQWIKKQMVGRESH-WIG 667
Query: 189 LTEGPSPGDFRYSDGTPVNYTNWYRGEPAGRGK-----EQCVEMYTDGQWNDRNC 238
LT+ ++++ DGT +Y NW G+P G E C + GQWND C
Sbjct: 668 LTDSERENEWKWLDGTSPDYKNWKAGQPDNWGHGHGPGEDCAGLIYAGQWNDFQC 722
Score = 62.4 bits (150), Expect = 3e-10
Identities = 35/73 (47%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Query: 28 GSPGIPGTPGSHGLPGRDGRDGLKGDPGPPGPMGPPGEMPCPPGNDGLPGAPGIPGECGE 87
G G G GS G PG G G KG+ G PGP GP GE P G G PG G G G
Sbjct: 446 GPRGPRGDRGSQGPPGPTGNKGQKGEKGEPGPPGPAGERG-PIGPAGPPGERGGKGSKGS 504
Query: 88 KGEPGERGPPGLP 100
+G G RG PG P
Sbjct: 505 QGPKGSRGSPGKP 517
Score = 55.8 bits (133), Expect = 3e-08
Identities = 32/71 (45%), Positives = 33/71 (46%), Gaps = 4/71 (5%)
Query: 28 GSPGIPGTPGSHGLPGRDGRDGLKGDPGPPGPMGPPGEMPCPPGNDGLPGAPGIPGECGE 87
G PG G G G G G G KG G G GPPG P G G G G PGE G
Sbjct: 443 GPPGPRGPRGDRGSQGPPGPTGNKGQKGEKGEPGPPG----PAGERGPIGPAGPPGERGG 498
Query: 88 KGEPGERGPPG 98
KG G +GP G
Sbjct: 499 KGSKGSQGPKG 509
Score = 50.4 bits (119), Expect = 1e-06
Identities = 27/58 (46%), Positives = 29/58 (50%), Gaps = 4/58 (6%)
Query: 41 LPGRDGRDGLKGDPGPPGPMGPPGEMPCPPGNDGLPGAPGIPGECGEKGEPGERGPPG 98
L G G G +GD G GP GP G G G G PG PG GE+G G GPPG
Sbjct: 441 LQGPPGPRGPRGDRGSQGPPGPTGN----KGQKGEKGEPGPPGPAGERGPIGPAGPPG 494
Score = 44.3 bits (103), Expect = 1e-04
Identities = 22/51 (43%), Positives = 26/51 (50%), Gaps = 10/51 (19%)
Query: 55 GPPGPMGPPGEMPCPPGNDGLPGAPGIPGECGEKGEPGERGPPGLPAHLDE 105
GPPGP GP G+ G+ G PG G KG+ GE+G PG P E
Sbjct: 443 GPPGPRGPRGDR----------GSQGPPGPTGNKGQKGEKGEPGPPGPAGE 483
>gi|5453619 collectin sub-family member 10 [Homo sapiens]
Length = 277
Score = 101 bits (251), Expect = 7e-22
Identities = 69/222 (31%), Positives = 103/222 (46%), Gaps = 16/222 (7%)
Query: 29 SPGIPGTPGSHGLPGRDGRDGLKGDPGPPGPMGPPGEMPCPPGNDGLPGAPGIPGECGEK 88
SPG G G G PG +G+ G G GP G G G+M GN G G G G+ GEK
Sbjct: 45 SPGPKGDDGEKGDPGEEGKHGKVGRMGPKGIKGELGDMG-DRGNIGKTGPIGKKGDKGEK 103
Query: 89 ---GEPGERGPPGLPAHLDE------ELQATLHDFRHQILQTRGALSLQGSIMTVGEKVF 139
G PGE+G G +L ++ + + + ++ I EK +
Sbjct: 104 GLLGIPGEKGKAGTVCDCGRYRKFVGQLDISIARLKTSMKFVKNVIA---GIRETEEKFY 160
Query: 140 SSNGQSITFDAIQEACARAGGRIAVPRNPEENEAIASFVKKYNTY-AYVGLTEGPSPGDF 198
+ + C GG +A+P++ N IA +V K + ++G+ + G +
Sbjct: 161 YIVQEEKNYRESLTHCRIRGGMLAMPKDEAANTLIADYVAKSGFFRVFIGVNDLEREGQY 220
Query: 199 RYSDGTPV-NYTNWYRGEPAG-RGKEQCVEMYTDGQWNDRNC 238
++D TP+ NY+NW GEP+ G E CVEM + G+WND C
Sbjct: 221 MFTDNTPLQNYSNWNEGEPSDPYGHEDCVEMLSSGRWNDTEC 262
>gi|13128972 collectin sub-family member 11 isoform a [Homo sapiens]
Length = 271
Score = 100 bits (249), Expect = 1e-21
Identities = 68/231 (29%), Positives = 108/231 (46%), Gaps = 9/231 (3%)
Query: 15 ASGAVCEVKDVCVGSPGIPGTPGSHGLPGRDGRDGLKGDPGPPGPMGPPGEMPCPPGNDG 74
A C V+ + G G G G G PGR GR G G+ G G G G + G G
Sbjct: 28 AGDDACSVQILVPGLKGDAGEKGDKGAPGRPGRVGPTGEKGDMGDKGQKGSVG-RHGKIG 86
Query: 75 LPGAPGIPGECGEKGEPGERGPPGLPAHLDEELQATLHDFRHQILQTRGALS-LQGSIMT 133
G+ G G+ G+ G PG G PGLP +L+ + + +Q+ Q L ++ ++
Sbjct: 87 PIGSKGEKGDSGDIGPPGPNGEPGLPCEC-SQLRKAIGEMDNQVSQLTSELKFIKNAVAG 145
Query: 134 VGE---KVFSSNGQSITFDAIQEACARAGGRIAVPRNPEENEAIASFVKKYN-TYAYVGL 189
V E K++ + + Q +C GG +++P++ N +A+++ + ++G+
Sbjct: 146 VRETESKIYLLVKEEKRYADAQLSCQGRGGTLSMPKDEAANGLMAAYLAQAGLARVFIGI 205
Query: 190 TEGPSPGDFRYSDGTPV-NYTNWYRGEPAGR-GKEQCVEMYTDGQWNDRNC 238
+ G F YSD +P+ + W GEP +E CVEM G WND C
Sbjct: 206 NDLEKEGAFVYSDHSPMRTFNKWRSGEPNNAYDEEDCVEMVASGGWNDVAC 256
Score = 33.1 bits (74), Expect = 0.23
Identities = 15/41 (36%), Positives = 21/41 (51%)
Query: 63 PGEMPCPPGNDGLPGAPGIPGECGEKGEPGERGPPGLPAHL 103
P P P G+D +PG G+ GE G++G PG P +
Sbjct: 21 PSGHPQPAGDDACSVQILVPGLKGDAGEKGDKGAPGRPGRV 61
>gi|15890086 type IV collagen alpha 5 isoform 2 precursor [Homo
sapiens]
Length = 1691
Score = 94.4 bits (233), Expect = 8e-20
Identities = 44/82 (53%), Positives = 51/82 (62%), Gaps = 2/82 (2%)
Query: 28 GSPGIPGTPGSHGLPGRDGRDGLKGDPGPPGPMGPPGEMPCP--PGNDGLPGAPGIPGEC 85
GSPG+PG G+ G PG G G+ G PGPPGP+G PG P G+DGL G PG+PG
Sbjct: 878 GSPGLPGKAGASGFPGTKGEMGMMGPPGPPGPLGIPGRSGVPGLKGDDGLQGQPGLPGPT 937
Query: 86 GEKGEPGERGPPGLPAHLDEEL 107
GEKG GE G PG P +D L
Sbjct: 938 GEKGSKGEPGLPGPPGPMDPNL 959
Score = 89.0 bits (219), Expect = 3e-18
Identities = 46/84 (54%), Positives = 50/84 (59%), Gaps = 6/84 (7%)
Query: 23 KDVCVGSPGIPGTPGSHGLPGRDGRDGLKGDPGPPGPMGPPGEMPCPPGND------GLP 76
KD G PGIPG PG G PG GRDG KG G GP GPPG + PG G
Sbjct: 302 KDGENGQPGIPGLPGDPGYPGEPGRDGEKGQKGDTGPPGPPGLVIPRPGTGITIGEKGNI 361
Query: 77 GAPGIPGECGEKGEPGERGPPGLP 100
G PG+PGE GE+G PG +GPPGLP
Sbjct: 362 GLPGLPGEKGERGFPGIQGPPGLP 385
Score = 86.7 bits (213), Expect = 2e-17
Identities = 46/99 (46%), Positives = 51/99 (51%), Gaps = 25/99 (25%)
Query: 27 VGSPGIPGTPGSHGLPGRDGRDGLKGDPGPPGP---MGPPGE-----------------M 66
VG PG+PG PG+ G G+ G G G PGPPGP GPPG
Sbjct: 1100 VGDPGLPGLPGTPGAKGQPGLPGFPGTPGPPGPKGISGPPGNPGLPGEPGPVGGGGHPGQ 1159
Query: 67 PCPPGNDGLPGAPGIPGECGEKGEPGE-----RGPPGLP 100
P PPG G PG GIPG G+KGEPG+ GPPGLP
Sbjct: 1160 PGPPGEKGKPGQDGIPGPAGQKGEPGQPGFGNPGPPGLP 1198
Score = 84.3 bits (207), Expect = 9e-17
Identities = 41/72 (56%), Positives = 46/72 (63%), Gaps = 1/72 (1%)
Query: 28 GSPGIPGTPGSHGLPGRDGRDGLKGDPGPPGPMGPPG-EMPCPPGNDGLPGAPGIPGECG 86
G PGIPG PG+ G PGR G +G G PG PGP G PG +P PPG GLPG G G G
Sbjct: 716 GFPGIPGPPGAPGTPGRIGLEGPPGPPGFPGPKGEPGFALPGPPGPPGLPGFKGALGPKG 775
Query: 87 EKGEPGERGPPG 98
++G PG GPPG
Sbjct: 776 DRGFPGPPGPPG 787
Score = 82.4 bits (202), Expect = 3e-16
Identities = 43/81 (53%), Positives = 48/81 (59%), Gaps = 6/81 (7%)
Query: 28 GSPGIPGTPGSHGLPGRDGRDGLKGDPGPPGPMGPPGE--MPCPPGNDGLPGAPGIPGEC 85
G+PG PG PG GLPG G G G PGPPG MGPPG +P P GN GL G
Sbjct: 171 GNPGYPGPPGIQGLPGPTGIPGPIGPPGPPGLMGPPGPPGLPGPKGNMGL----NFQGPK 226
Query: 86 GEKGEPGERGPPGLPAHLDEE 106
GEKGE G +GPPG P + E+
Sbjct: 227 GEKGEQGLQGPPGPPGQISEQ 247
Score = 82.0 bits (201), Expect = 4e-16
Identities = 40/79 (50%), Positives = 45/79 (56%), Gaps = 4/79 (5%)
Query: 28 GSPGIPGTPGSHGLPGRDGRDGLKGDPGPPGPMGPPGE----MPCPPGNDGLPGAPGIPG 83
G G+PG PG+ GLPG G G G PG GP GPPG + P GN G G PG PG
Sbjct: 1205 GDGGLPGIPGNPGLPGPKGEPGFHGFPGVQGPPGPPGSPGPALEGPKGNPGPQGPPGRPG 1264
Query: 84 ECGEKGEPGERGPPGLPAH 102
G +G PG GPPGLP +
Sbjct: 1265 PTGFQGLPGPEGPPGLPGN 1283
Score = 80.9 bits (198), Expect = 9e-16
Identities = 46/89 (51%), Positives = 50/89 (56%), Gaps = 13/89 (14%)
Query: 28 GSPGIPGTPGSHGLPGRDGRDGLKGDPGPPG--PMGPPGE-----MPCPPGNDGLPGAPG 80
G PG PG PG G PG G G KGDPGPPG GPPGE +P PG G PG+PG
Sbjct: 822 GPPGPPGIPGPIGQPGLHGIPGEKGDPGPPGLDVPGPPGERGSPGIPGAPGPIGPPGSPG 881
Query: 81 IPGEC------GEKGEPGERGPPGLPAHL 103
+PG+ G KGE G GPPG P L
Sbjct: 882 LPGKAGASGFPGTKGEMGMMGPPGPPGPL 910
Score = 80.1 bits (196), Expect = 2e-15
Identities = 43/84 (51%), Positives = 47/84 (55%), Gaps = 11/84 (13%)
Query: 28 GSPGIPGTPGSHGLPGRDGRDGLKGDPGPPGP---MGPPG--------EMPCPPGNDGLP 76
G PG+PG PG G PG G+ G G PGPPGP GPPG +P PG+DG P
Sbjct: 57 GHPGLPGFPGPEGPPGPRGQKGDDGIPGPPGPKGIRGPPGLPGFPGTPGLPGMPGHDGAP 116
Query: 77 GAPGIPGECGEKGEPGERGPPGLP 100
G GIPG G KGE G G PG P
Sbjct: 117 GPQGIPGCNGTKGERGFPGSPGFP 140
Score = 78.2 bits (191), Expect = 6e-15
Identities = 40/75 (53%), Positives = 47/75 (62%), Gaps = 6/75 (8%)
Query: 28 GSPGIPGTPGSHGLPGRDGRDGLKGDPGPPGPMGPPGEMPCPPGNDGLPGAPGIPGECGE 87
G+PG+PG PG G PG G G G PGP G GPPG P G G PG+PG+PG+ G+
Sbjct: 1009 GNPGLPGQPGLIGPPGLKGTIGDMGFPGPQGVEGPPG----PSGVPGQPGSPGLPGQKGD 1064
Query: 88 KGEPG--ERGPPGLP 100
KG+PG G PGLP
Sbjct: 1065 KGDPGISSIGLPGLP 1079
Score = 77.8 bits (190), Expect = 8e-15
Identities = 41/81 (50%), Positives = 43/81 (53%), Gaps = 8/81 (9%)
Query: 28 GSPGIPGTPGSHGLPGRDGRDGLKGDPGPPGPMGPPGE--------MPCPPGNDGLPGAP 79
G PG GT G G PG G GL+G PGPPG G GE +P P GN G PG P
Sbjct: 120 GIPGCNGTKGERGFPGSPGFPGLQGPPGPPGIPGMKGEPGSIIMSSLPGPKGNPGYPGPP 179
Query: 80 GIPGECGEKGEPGERGPPGLP 100
GI G G G PG GPPG P
Sbjct: 180 GIQGLPGPTGIPGPIGPPGPP 200
Score = 77.4 bits (189), Expect = 1e-14
Identities = 41/95 (43%), Positives = 48/95 (50%), Gaps = 21/95 (22%)
Query: 28 GSPGIPGTPGSHGLPGRDGRDGLKGDPGPPGPMGPPGEMPCPPGNDGLPGAPGIPGECGE 87
G PG PG PG G+ G G GL G+PGP G G PG+ P PPG G PG GIPG G+
Sbjct: 1122 GFPGTPGPPGPKGISGPPGNPGLPGEPGPVGGGGHPGQ-PGPPGEKGKPGQDGIPGPAGQ 1180
Query: 88 KGEPGERG--------------------PPGLPAH 102
KGEPG+ G PG+P +
Sbjct: 1181 KGEPGQPGFGNPGPPGLPGLSGQKGDGGLPGIPGN 1215
Score = 77.0 bits (188), Expect = 1e-14
Identities = 48/94 (51%), Positives = 50/94 (53%), Gaps = 17/94 (18%)
Query: 23 KDVCVGSPGIPGTPGSHGLPGRDGRDGLKGD-----PGPPGPMGPPGEMPCPPGNDGLP- 76
+D VG PG PG PG GLPG G G G PGPPGP G PG +P PPG G P
Sbjct: 673 RDGDVGLPGDPGLPGQPGLPGIPGSKGEPGIPGIGLPGPPGPKGFPG-IPGPPGAPGTPG 731
Query: 77 -----GAPGIPGECGEKGE-----PGERGPPGLP 100
G PG PG G KGE PG GPPGLP
Sbjct: 732 RIGLEGPPGPPGFPGPKGEPGFALPGPPGPPGLP 765
Score = 76.6 bits (187), Expect = 2e-14
Identities = 43/91 (47%), Positives = 49/91 (53%), Gaps = 15/91 (16%)
Query: 28 GSPGIPGTPGSHGLPGRDGRDG-------LKGDPGPPGPMGPPG--EMPCPPGNDGLPGA 78
G PGIPG PG+ G PG G G +KGD G G G PG +P PG DGLPG
Sbjct: 527 GLPGIPGAPGAPGFPGSKGEPGDILTFPGMKGDKGELGSPGAPGLPGLPGTPGQDGLPGL 586
Query: 79 PGIPGECG------EKGEPGERGPPGLPAHL 103
PG GE G E+G PG G PGLP ++
Sbjct: 587 PGPKGEPGGITFKGERGPPGNPGLPGLPGNI 617
Score = 76.6 bits (187), Expect = 2e-14
Identities = 39/74 (52%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Query: 27 VGSPGIPGTPGSHGLPGRDGRDGLKGDPGPPGPMGPPGEMPCPPGNDGLPGAPGIPGECG 86
+G PG+PG G GLPG G G+KG G PG G PG P G GLPG PG PG G
Sbjct: 1073 IGLPGLPGPKGEPGLPGYPGNPGIKGSVGDPGLPGLPG-TPGAKGQPGLPGFPGTPGPPG 1131
Query: 87 EKGEPGERGPPGLP 100
KG G G PGLP
Sbjct: 1132 PKGISGPPGNPGLP 1145
Score = 75.9 bits (185), Expect = 3e-14
Identities = 43/87 (49%), Positives = 46/87 (52%), Gaps = 13/87 (14%)
Query: 26 CVGSPGIPGTPGSHGLPGRDGR------DGLKGDPGP------PGPMGPPGEMPCPPGND 73
C G+ G G PGS G PG G G+KG+PG PGP G PG P PPG
Sbjct: 124 CNGTKGERGFPGSPGFPGLQGPPGPPGIPGMKGEPGSIIMSSLPGPKGNPG-YPGPPGIQ 182
Query: 74 GLPGAPGIPGECGEKGEPGERGPPGLP 100
GLPG GIPG G G PG GPPG P
Sbjct: 183 GLPGPTGIPGPIGPPGPPGLMGPPGPP 209
Score = 75.5 bits (184), Expect = 4e-14
Identities = 39/84 (46%), Positives = 45/84 (53%), Gaps = 11/84 (13%)
Query: 28 GSPGIPGTPGSHGLPGRDGRDGLKGDPGPPGPMGPPGE-----------MPCPPGNDGLP 76
G+ GI G G+ G PG G GLKGD GPPG G PG +P PG G+
Sbjct: 1282 GNGGIKGEKGNPGQPGLPGLPGLKGDQGPPGLQGNPGRPGLNGMKGDPGLPGVPGFPGMK 1341
Query: 77 GAPGIPGECGEKGEPGERGPPGLP 100
G G+PG G +GEPG GPPG P
Sbjct: 1342 GPSGVPGSAGPEGEPGLIGPPGPP 1365
Score = 75.1 bits (183), Expect = 5e-14
Identities = 44/83 (53%), Positives = 48/83 (57%), Gaps = 10/83 (12%)
Query: 27 VGSPGIPGTPGSHGLPGRDGRDGL---KGDPGP---PGPMGPPG----EMPCPPGNDGLP 76
+G G G PG G PGR G DGL KGD GP PGPMGPPG + PPG G+P
Sbjct: 771 LGPKGDRGFPGPPGPPGRTGLDGLPGPKGDVGPNGQPGPMGPPGLPGIGVQGPPGPPGIP 830
Query: 77 GAPGIPGECGEKGEPGERGPPGL 99
G G PG G GE G+ GPPGL
Sbjct: 831 GPIGQPGLHGIPGEKGDPGPPGL 853
Score = 75.1 bits (183), Expect = 5e-14
Identities = 39/75 (52%), Positives = 43/75 (57%), Gaps = 3/75 (4%)
Query: 28 GSPGIPGTPGSHGLPGRDGRDGLKGDPGPPGPMGPPGEMPCPPGNDGLPGAPGIPGEC-- 85
G+PG PG PG G G G G+ G+PG PGP G PG PG G PG PG PG
Sbjct: 1190 GNPGPPGLPGLSGQKGDGGLPGIPGNPGLPGPKGEPG-FHGFPGVQGPPGPPGSPGPALE 1248
Query: 86 GEKGEPGERGPPGLP 100
G KG PG +GPPG P
Sbjct: 1249 GPKGNPGPQGPPGRP 1263
Score = 74.7 bits (182), Expect = 7e-14
Identities = 37/73 (50%), Positives = 42/73 (57%), Gaps = 1/73 (1%)
Query: 28 GSPGIPGTPGSHGLPGRDGRDGLKGDPGPPGPMGPPGEMPCPPGNDGLPGAPGIPGECGE 87
G PG+ G G GLPG G+ GL G PG PGP GP G P PG GL G PG+ G G+
Sbjct: 973 GIPGVSGPKGYQGLPGDPGQPGLSGQPGLPGPPGPKGN-PGLPGQPGLIGPPGLKGTIGD 1031
Query: 88 KGEPGERGPPGLP 100
G PG +G G P
Sbjct: 1032 MGFPGPQGVEGPP 1044
Score = 74.7 bits (182), Expect = 7e-14
Identities = 39/79 (49%), Positives = 45/79 (56%), Gaps = 6/79 (7%)
Query: 28 GSPGIPGTPGSHGLPGRDGRDGLKGDPGPPGPMGPPGE--MPCPPGND----GLPGAPGI 81
G PG+PG PG G+ G G G G G PG +GPPG +P P G G G PGI
Sbjct: 1327 GDPGLPGVPGFPGMKGPSGVPGSAGPEGEPGLIGPPGPPGLPGPSGQSIIIKGDAGPPGI 1386
Query: 82 PGECGEKGEPGERGPPGLP 100
PG+ G KG PG +GP GLP
Sbjct: 1387 PGQPGLKGLPGPQGPQGLP 1405
Score = 74.3 bits (181), Expect = 9e-14
Identities = 39/87 (44%), Positives = 47/87 (54%), Gaps = 14/87 (16%)
Query: 28 GSPGIPGTPGS--------HGLPGRDGRDGLKG------DPGPPGPMGPPGEMPCPPGND 73
G+PG+PG PG+ G PG G G++G PG PGP G PG+ PG
Sbjct: 606 GNPGLPGLPGNIGPMGPPGFGPPGPVGEKGIQGVAGNPGQPGIPGPKGDPGQTITQPGKP 665
Query: 74 GLPGAPGIPGECGEKGEPGERGPPGLP 100
GLPG PG G+ G G+PG G PGLP
Sbjct: 666 GLPGNPGRDGDVGLPGDPGLPGQPGLP 692
Score = 74.3 bits (181), Expect = 9e-14
Identities = 42/76 (55%), Positives = 45/76 (59%), Gaps = 9/76 (11%)
Query: 27 VGSPGIPGTPGSHGLPGRDGRDGLKGDPGPPGPMGPPGEMPCPPGNDGLPGAPGI--PGE 84
+ PG PG PG+ PGRDG GL GDPG PG G PG PG+ G PG PGI PG
Sbjct: 659 ITQPGKPGLPGN---PGRDGDVGLPGDPGLPGQPGLPG----IPGSKGEPGIPGIGLPGP 711
Query: 85 CGEKGEPGERGPPGLP 100
G KG PG GPPG P
Sbjct: 712 PGPKGFPGIPGPPGAP 727
Score = 74.3 bits (181), Expect = 9e-14
Identities = 40/80 (50%), Positives = 42/80 (52%), Gaps = 7/80 (8%)
Query: 28 GSPGIPGTPGSH---GLPGRDGRDGLKGDPGPPGPMGPPG----EMPCPPGNDGLPGAPG 80
G PG+PG PG GLPG G G G PG PG G PG +P PPG G PG PG
Sbjct: 663 GKPGLPGNPGRDGDVGLPGDPGLPGQPGLPGIPGSKGEPGIPGIGLPGPPGPKGFPGIPG 722
Query: 81 IPGECGEKGEPGERGPPGLP 100
PG G G G GPPG P
Sbjct: 723 PPGAPGTPGRIGLEGPPGPP 742
Score = 73.9 bits (180), Expect = 1e-13
Identities = 42/85 (49%), Positives = 45/85 (52%), Gaps = 12/85 (14%)
Query: 27 VGSPGIPGTPGSHGLPGRDGRDGLKGDPGPPGPMGPPGEMPCPPGNDGLPGAP------- 79
+GSPG PG PG G PG+DG GL G G PG + GE PPGN GLPG P
Sbjct: 563 LGSPGAPGLPGLPGTPGQDGLPGLPGPKGEPGGITFKGERG-PPGNPGLPGLPGNIGPMG 621
Query: 80 ----GIPGECGEKGEPGERGPPGLP 100
G PG GEKG G G PG P
Sbjct: 622 PPGFGPPGPVGEKGIQGVAGNPGQP 646
Score = 73.9 bits (180), Expect = 1e-13
Identities = 43/79 (54%), Positives = 46/79 (58%), Gaps = 8/79 (10%)
Query: 28 GSPGIPGTPGSHGLPGRDGRDGLKGDPGP---PGPMGPPGEMPCPPGNDGLPGAPGIPGE 84
G G PG PG G G DG G KGD GP PGPMGPPG +P G G PG PGIPG
Sbjct: 775 GDRGFPGPPGPPGRTGLDGLPGPKGDVGPNGQPGPMGPPG-LP-GIGVQGPPGPPGIPGP 832
Query: 85 CGE---KGEPGERGPPGLP 100
G+ G PGE+G PG P
Sbjct: 833 IGQPGLHGIPGEKGDPGPP 851
Score = 73.6 bits (179), Expect = 2e-13
Identities = 39/82 (47%), Positives = 43/82 (52%), Gaps = 9/82 (10%)
Query: 27 VGSPGIPGTPGSHGLPGRDGRD--------GLKGDPGPPGPMGPPGEMPCPPGNDGLPGA 78
+G PG+ G PG G PG G D G G PG PGP+GPPG P PG G G
Sbjct: 833 IGQPGLHGIPGEKGDPGPPGLDVPGPPGERGSPGIPGAPGPIGPPGS-PGLPGKAGASGF 891
Query: 79 PGIPGECGEKGEPGERGPPGLP 100
PG GE G G PG GP G+P
Sbjct: 892 PGTKGEMGMMGPPGPPGPLGIP 913
Score = 73.6 bits (179), Expect = 2e-13
Identities = 39/82 (47%), Positives = 44/82 (53%), Gaps = 9/82 (10%)
Query: 28 GSPGIPGTPGSHGLPGR---DGRDGLKGDPGPPGPMGPPGEM------PCPPGNDGLPGA 78
G PG PG G G+PG +G GL G PGPPG GP G+ PPG G PG
Sbjct: 1333 GVPGFPGMKGPSGVPGSAGPEGEPGLIGPPGPPGLPGPSGQSIIIKGDAGPPGIPGQPGL 1392
Query: 79 PGIPGECGEKGEPGERGPPGLP 100
G+PG G +G PG GPPG P
Sbjct: 1393 KGLPGPQGPQGLPGPTGPPGDP 1414
Score = 73.2 bits (178), Expect = 2e-13
Identities = 46/94 (48%), Positives = 49/94 (52%), Gaps = 16/94 (17%)
Query: 28 GSPGIPGT----------PGSHGLPGRDGRDGLKGDPGPPGPMGPPGEMPCPPGNDGLPG 77
G PGIPG PG GLPG GRDG G PG PG G PG +P PG+ G PG
Sbjct: 644 GQPGIPGPKGDPGQTITQPGKPGLPGNPGRDGDVGLPGDPGLPGQPG-LPGIPGSKGEPG 702
Query: 78 APGI--PGECGEKGEPGERGP---PGLPAHLDEE 106
PGI PG G KG PG GP PG P + E
Sbjct: 703 IPGIGLPGPPGPKGFPGIPGPPGAPGTPGRIGLE 736
Score = 73.2 bits (178), Expect = 2e-13
Identities = 38/75 (50%), Positives = 42/75 (56%), Gaps = 1/75 (1%)
Query: 28 GSPGIPGTPGSHGLPGRDGRDGLKGDPGPPGPMGPPGEMPCPPGNDGLPGAPGIPGECGE 87
G PG+PG PG+ G+ G G GL G PG PG G PG +P PG G PG GI G G
Sbjct: 1083 GEPGLPGYPGNPGIKGSVGDPGLPGLPGTPGAKGQPG-LPGFPGTPGPPGPKGISGPPGN 1141
Query: 88 KGEPGERGPPGLPAH 102
G PGE GP G H
Sbjct: 1142 PGLPGEPGPVGGGGH 1156
Score = 72.8 bits (177), Expect = 3e-13
Identities = 41/89 (46%), Positives = 44/89 (49%), Gaps = 16/89 (17%)
Query: 28 GSPGIPGTPGSHGLPGRDGRDGLKGDPGPPGPMGPPGE-----MPCPPG----------- 71
G PG G PG G+PG G DGL+G PG PGP G G +P PPG
Sbjct: 905 GPPGPLGIPGRSGVPGLKGDDGLQGQPGLPGPTGEKGSKGEPGLPGPPGPMDPNLLGSKG 964
Query: 72 NDGLPGAPGIPGECGEKGEPGERGPPGLP 100
G PG PGIPG G KG G G PG P
Sbjct: 965 EKGEPGLPGIPGVSGPKGYQGLPGDPGQP 993
Score = 72.0 bits (175), Expect = 4e-13
Identities = 45/98 (45%), Positives = 50/98 (51%), Gaps = 8/98 (8%)
Query: 6 LALNLILMAASGAVC---EVKDVCVGSPGIPGTPGSHGLPGRDGRDGLKGDPGPPGPMGP 62
LAL+L A A C C S GI G G G PG +G GL G PGP GP GP
Sbjct: 15 LALSLWGQPAEAAACYGCSPGSKCDCS-GIKGEKGERGFPGLEGHPGLPGFPGPEGPPGP 73
Query: 63 PGEMPCPPGNDGLPGAPGIPGECGEKGEPGERGPPGLP 100
G+ G+DG+PG PG G G G PG G PGLP
Sbjct: 74 RGQ----KGDDGIPGPPGPKGIRGPPGLPGFPGTPGLP 107
Score = 72.0 bits (175), Expect = 4e-13
Identities = 39/74 (52%), Positives = 43/74 (58%), Gaps = 4/74 (5%)
Query: 28 GSPGIPGTPGSHGLPGRDGRDGLKGDPGPPGPMGPPGEMPCPP---GNDGLPGAPGIPGE 84
G G PG PG G+ G G GL GDPG PG G PG +P PP GN GLPG PG+ G
Sbjct: 964 GEKGEPGLPGIPGVSGPKGYQGLPGDPGQPGLSGQPG-LPGPPGPKGNPGLPGQPGLIGP 1022
Query: 85 CGEKGEPGERGPPG 98
G KG G+ G PG
Sbjct: 1023 PGLKGTIGDMGFPG 1036
Score = 72.0 bits (175), Expect = 4e-13
Identities = 40/81 (49%), Positives = 42/81 (51%), Gaps = 11/81 (13%)
Query: 28 GSPGIPGTPGSHGLPGRDGRDGLKGDPGPPGPMGPPGEMPCP--------PGNDGLPGAP 79
G PGIPG PG GLPG G GL PGP GP G PG P G+ GLPG P
Sbjct: 1382 GPPGIPGQPGLKGLPGPQGPQGL---PGPTGPPGDPGRNGLPGFDGAGGRKGDPGLPGQP 1438
Query: 80 GIPGECGEKGEPGERGPPGLP 100
G G G G G +GPPG P
Sbjct: 1439 GTRGLDGPPGPDGLQGPPGPP 1459
Score = 71.6 bits (174), Expect = 6e-13
Identities = 40/84 (47%), Positives = 47/84 (55%), Gaps = 10/84 (11%)
Query: 24 DVCVGSPGIPGTPGSHGLPGRDGRDGLKGDPGPP-------GPMGPPGEMPCPPGNDGLP 76
++C PG PG PGS G G G G+KGD G G GPPG+ P PG G P
Sbjct: 449 EIC--EPGPPGPPGSPGDKGLQGEQGVKGDKGDTCFNCIGTGISGPPGQ-PGLPGLPGPP 505
Query: 77 GAPGIPGECGEKGEPGERGPPGLP 100
G+ G PG+ GEKG+ G GP GLP
Sbjct: 506 GSLGFPGQKGEKGQAGATGPKGLP 529
Score = 70.5 bits (171), Expect = 1e-12
Identities = 38/80 (47%), Positives = 44/80 (55%), Gaps = 8/80 (10%)
Query: 28 GSPGIPGTPGSHGLPGRDGRDGLKGDPGPPGPMGPPGEMPCPPGNDGLPGAPGIPGEC-- 85
G PG+PG PG G G G+ G KG G GP G PG +P PG G PG+ G PG+
Sbjct: 494 GQPGLPGLPGPPGSLGFPGQKGEKGQAGATGPKGLPG-IPGAPGAPGFPGSKGEPGDILT 552
Query: 86 -----GEKGEPGERGPPGLP 100
G+KGE G G PGLP
Sbjct: 553 FPGMKGDKGELGSPGAPGLP 572
Score = 70.5 bits (171), Expect = 1e-12
Identities = 42/98 (42%), Positives = 48/98 (48%), Gaps = 25/98 (25%)
Query: 27 VGSPGIPGTPGSHGLPGRDGRDGLKGD------PGPPGPMGPPGE-----MPCPP----- 70
+G G PG PG G+PGR G GLKGD PG PGP G G +P PP
Sbjct: 898 MGMMGPPGPPGPLGIPGRSGVPGLKGDDGLQGQPGLPGPTGEKGSKGEPGLPGPPGPMDP 957
Query: 71 ---------GNDGLPGAPGIPGECGEKGEPGERGPPGL 99
G GLPG PG+ G G +G PG+ G PGL
Sbjct: 958 NLLGSKGEKGEPGLPGIPGVSGPKGYQGLPGDPGQPGL 995
Score = 69.7 bits (169), Expect = 2e-12
Identities = 41/89 (46%), Positives = 45/89 (50%), Gaps = 17/89 (19%)
Query: 28 GSPGIPGTPGSHGLPGRDGRDGLKGDPGPPGPMGPPGE--MPCPPGNDGL------PGAP 79
G PG+PG PG+ GLPG G DG G G PG G GE P PG GL PG P
Sbjct: 93 GPPGLPGFPGTPGLPGMPGHDGAPGPQGIPGCNGTKGERGFPGSPGFPGLQGPPGPPGIP 152
Query: 80 GIPGECGE---------KGEPGERGPPGL 99
G+ GE G KG PG GPPG+
Sbjct: 153 GMKGEPGSIIMSSLPGPKGNPGYPGPPGI 181
Score = 68.6 bits (166), Expect = 5e-12
Identities = 52/161 (32%), Positives = 56/161 (34%), Gaps = 82/161 (50%)
Query: 28 GSPGIPGTPGSHGLPGRDGRDGLKGDPGPPGP---------------------------- 59
G PG+PG PG G PGRDG G KGD GPPGP
Sbjct: 310 GIPGLPGDPGYPGEPGRDGEKGQKGDTGPPGPPGLVIPRPGTGITIGEKGNIGLPGLPGE 369
Query: 60 ---------------MGPPG---------------------------EMPCPPGNDGLPG 77
GPPG +P PPG DG PG
Sbjct: 370 KGERGFPGIQGPPGLPGPPGAAVMGPPGPPGFPGERGQKGDEGPPGISIPGPPGLDGQPG 429
Query: 78 APGIPGECGEKG----------EPGERGPPGLPAHLDEELQ 108
APG+PG G G EPG GPPG P D+ LQ
Sbjct: 430 APGLPGPPGPAGPHIPPSDEICEPGPPGPPGSPG--DKGLQ 468
Score = 68.6 bits (166), Expect = 5e-12
Identities = 38/72 (52%), Positives = 42/72 (58%), Gaps = 2/72 (2%)
Query: 28 GSPGIPGTPGSHGLPGRDGRDGLKGDPGPPGPMGPPGEMPCPPGNDGLPGAPGIPGECGE 87
G PG PG+PG L G G G +G PG PGP G G +P P G GLPG GI GE G
Sbjct: 1235 GPPGPPGSPGP-ALEGPKGNPGPQGPPGRPGPTGFQG-LPGPEGPPGLPGNGGIKGEKGN 1292
Query: 88 KGEPGERGPPGL 99
G+PG G PGL
Sbjct: 1293 PGQPGLPGLPGL 1304
Score = 68.6 bits (166), Expect = 5e-12
Identities = 37/73 (50%), Positives = 41/73 (56%), Gaps = 1/73 (1%)
Query: 28 GSPGIPGTPGSHGLPGRDGRDGLKGDPGPPGPMGPPGEMPCPPGNDGLPGAPGIPGECGE 87
G G+PG G GLPG G G KG+PG PG G PG + G GL G PG PG G
Sbjct: 1267 GFQGLPGPEGPPGLPGNGGIKGEKGNPGQPGLPGLPG-LKGDQGPPGLQGNPGRPGLNGM 1325
Query: 88 KGEPGERGPPGLP 100
KG+PG G PG P
Sbjct: 1326 KGDPGLPGVPGFP 1338
Score = 68.2 bits (165), Expect = 6e-12
Identities = 39/86 (45%), Positives = 45/86 (52%), Gaps = 14/86 (16%)
Query: 28 GSPGIPGTPGSHGLPGRDGRDGLKGDPGPPGPMGPPGEMPCPPGNDGLPGAP---GIPGE 84
G PGI PG GL G+ G GL G PGP GP PP + C PG G PG+P G+ GE
Sbjct: 412 GPPGI-SIPGPPGLDGQPGAPGLPGPPGPAGPHIPPSDEICEPGPPGPPGSPGDKGLQGE 470
Query: 85 CGEKGEPGE----------RGPPGLP 100
G KG+ G+ GPPG P
Sbjct: 471 QGVKGDKGDTCFNCIGTGISGPPGQP 496
Score = 68.2 bits (165), Expect = 6e-12
Identities = 46/112 (41%), Positives = 49/112 (43%), Gaps = 39/112 (34%)
Query: 28 GSPGIPGTPGSHGLPGRDGRDG---------LKGDPGPPGPMGPPGE------------- 65
G PG+PG PGS G PG+ G G L G PG PG G PG
Sbjct: 497 GLPGLPGPPGSLGFPGQKGEKGQAGATGPKGLPGIPGAPGAPGFPGSKGEPGDILTFPGM 556
Query: 66 --------MPCPPGNDGLPGAP---GIPGECGEKGEP------GERGPPGLP 100
P PG GLPG P G+PG G KGEP GERGPPG P
Sbjct: 557 KGDKGELGSPGAPGLPGLPGTPGQDGLPGLPGPKGEPGGITFKGERGPPGNP 608
Score = 67.4 bits (163), Expect = 1e-11
Identities = 42/85 (49%), Positives = 44/85 (51%), Gaps = 16/85 (18%)
Query: 28 GSPGIPGTPGSHGLPGRDGRDGLKGDPGP------PGPMGPPGEMPCPPGNDGL------ 75
G PG PG PG G PG G G+KG+PG PGP G PG P PPG GL
Sbjct: 132 GFPGSPGFPGLQGPPGPPGIPGMKGEPGSIIMSSLPGPKGNPG-YPGPPGIQGLPGPTGI 190
Query: 76 PGAPGIPGECGEKGEPGERGPPGLP 100
PG G PG G G P GPPGLP
Sbjct: 191 PGPIGPPGPPGLMGPP---GPPGLP 212
Score = 67.4 bits (163), Expect = 1e-11
Identities = 44/109 (40%), Positives = 52/109 (47%), Gaps = 36/109 (33%)
Query: 27 VGSPGIPGT---------------PGSHGLPGRDGRDGL---KGD-----------PGPP 57
+G PG+ GT PG G+PG+ G GL KGD PG P
Sbjct: 1020 IGPPGLKGTIGDMGFPGPQGVEGPPGPSGVPGQPGSPGLPGQKGDKGDPGISSIGLPGLP 1079
Query: 58 GPMGPPGEMPCPPGNDGL------PGAPGIPGECGEKGEPGERGPPGLP 100
GP G PG +P PGN G+ PG PG+PG G KG+PG G PG P
Sbjct: 1080 GPKGEPG-LPGYPGNPGIKGSVGDPGLPGLPGTPGAKGQPGLPGFPGTP 1127
Score = 66.6 bits (161), Expect = 2e-11
Identities = 43/106 (40%), Positives = 48/106 (45%), Gaps = 22/106 (20%)
Query: 16 SGAVCEVKDVCVGSPGIPGTPGSHGLPGRDGRDGLKGDP----------GPPGPMGPPGE 65
S +CE G PG PG+PG GL G G G KGD GPPG G PG
Sbjct: 447 SDEICEP-----GPPGPPGSPGDKGLQGEQGVKGDKGDTCFNCIGTGISGPPGQPGLPG- 500
Query: 66 MPCPPGNDGLPGAPGIPGECGEKGE------PGERGPPGLPAHLDE 105
+P PPG+ G PG G G+ G G PG G PG P E
Sbjct: 501 LPGPPGSLGFPGQKGEKGQAGATGPKGLPGIPGAPGAPGFPGSKGE 546
Score = 66.6 bits (161), Expect = 2e-11
Identities = 38/89 (42%), Positives = 45/89 (50%), Gaps = 20/89 (22%)
Query: 27 VGSPGIPGTPGSHG-------------LPGRDGRDGLKGDPGP---PGPMGPPGEMPCPP 70
+G PG PG PG G +PG+ G GL G GP PGP GPPG+ P
Sbjct: 1359 IGPPGPPGLPGPSGQSIIIKGDAGPPGIPGQPGLKGLPGPQGPQGLPGPTGPPGD----P 1414
Query: 71 GNDGLPGAPGIPGECGEKGEPGERGPPGL 99
G +GLPG G G G+ G PG+ G GL
Sbjct: 1415 GRNGLPGFDGAGGRKGDPGLPGQPGTRGL 1443
Score = 65.9 bits (159), Expect = 3e-11
Identities = 35/73 (47%), Positives = 40/73 (54%), Gaps = 1/73 (1%)
Query: 28 GSPGIPGTPGSHGLPGRDGRDGLKGDPGPPGPMGPPGEMPCPPGNDGLPGAPGIPGECGE 87
G G PG G G PG G GL G GPPG G G + GN G PG PG+PG G+
Sbjct: 1249 GPKGNPGPQGPPGRPGPTGFQGLPGPEGPPGLPG-NGGIKGEKGNPGQPGLPGLPGLKGD 1307
Query: 88 KGEPGERGPPGLP 100
+G PG +G PG P
Sbjct: 1308 QGPPGLQGNPGRP 1320
Score = 65.5 bits (158), Expect = 4e-11
Identities = 44/108 (40%), Positives = 50/108 (46%), Gaps = 36/108 (33%)
Query: 27 VGSPGIP---GTPGSHGLPGRDGRDGL--------KGDPGPPGPMGPPGEM--------- 66
+G PG P G PG GLPG G GL KG+ G GP GPPG++
Sbjct: 194 IGPPGPPGLMGPPGPPGLPGPKGNMGLNFQGPKGEKGEQGLQGPPGPPGQISEQKRPIDV 253
Query: 67 ---------------PCPPGNDGLPGAP-GIPGECGEKGEPGERGPPG 98
P PPG G PG P G GE GE+GEPG+RG PG
Sbjct: 254 EFQKGDQGLPGDRGPPGPPGIRGPPGPPGGEKGEKGEQGEPGKRGKPG 301
Score = 65.5 bits (158), Expect = 4e-11
Identities = 44/101 (43%), Positives = 50/101 (49%), Gaps = 26/101 (25%)
Query: 28 GSPGIPGTPGSHGLPGRDGRDG------LKGDPGPPGP------------MGPPGEMPCP 69
G PG+PGTPG GLPG G G KG+ GPPG MGPPG P
Sbjct: 570 GLPGLPGTPGQDGLPGLPGPKGEPGGITFKGERGPPGNPGLPGLPGNIGPMGPPGFGPPG 629
Query: 70 P----GNDGLPGAPGIPGECGEKGEPGER----GPPGLPAH 102
P G G+ G PG PG G KG+PG+ G PGLP +
Sbjct: 630 PVGEKGIQGVAGNPGQPGIPGPKGDPGQTITQPGKPGLPGN 670
Score = 61.2 bits (147), Expect = 8e-10
Identities = 37/88 (42%), Positives = 41/88 (46%), Gaps = 10/88 (11%)
Query: 28 GSPGIPGTPGSHGLP-------GRDGRDGLKGDPGPPG---PMGPPGEMPCPPGNDGLPG 77
G PG PG P G G G +G PGPPG P GPPG G G PG
Sbjct: 236 GPPGPPGQISEQKRPIDVEFQKGDQGLPGDRGPPGPPGIRGPPGPPGGEKGEKGEQGEPG 295
Query: 78 APGIPGECGEKGEPGERGPPGLPAHLDE 105
G PG+ GE G+PG G PG P + E
Sbjct: 296 KRGKPGKDGENGQPGIPGLPGDPGYPGE 323
Score = 60.8 bits (146), Expect = 1e-09
Identities = 43/128 (33%), Positives = 49/128 (38%), Gaps = 45/128 (35%)
Query: 27 VGSPGIPGTPGSHGL--------------PGRDGRDGLKGDPGPPGPMGP---PGEMPCP 69
+G PG PG PG G PG DG+ G G PGPPGP GP P + C
Sbjct: 393 MGPPGPPGFPGERGQKGDEGPPGISIPGPPGLDGQPGAPGLPGPPGPAGPHIPPSDEICE 452
Query: 70 PGNDGLPGAPGI----------------------------PGECGEKGEPGERGPPGLPA 101
PG G PG+PG PG+ G G PG G G P
Sbjct: 453 PGPPGPPGSPGDKGLQGEQGVKGDKGDTCFNCIGTGISGPPGQPGLPGLPGPPGSLGFPG 512
Query: 102 HLDEELQA 109
E+ QA
Sbjct: 513 QKGEKGQA 520
Score = 50.1 bits (118), Expect = 2e-06
Identities = 20/31 (64%), Positives = 23/31 (74%)
Query: 28 GSPGIPGTPGSHGLPGRDGRDGLKGDPGPPG 58
G PG+PG PG+ GL G G DGL+G PGPPG
Sbjct: 1430 GDPGLPGQPGTRGLDGPPGPDGLQGPPGPPG 1460
Score = 46.2 bits (108), Expect = 3e-05
Identities = 25/55 (45%), Positives = 26/55 (47%), Gaps = 18/55 (32%)
Query: 28 GSPGIPGTPGSHGLPGRDGRDGLKGDPGPPG------------------PMGPPG 64
G G PG PG +GLPG DG G KGDPG PG P GPPG
Sbjct: 1406 GPTGPPGDPGRNGLPGFDGAGGRKGDPGLPGQPGTRGLDGPPGPDGLQGPPGPPG 1460
>gi|4502955 type IV collagen alpha 5 isoform 1 precursor [Homo
sapiens]
Length = 1685
Score = 94.4 bits (233), Expect = 8e-20
Identities = 44/82 (53%), Positives = 51/82 (62%), Gaps = 2/82 (2%)
Query: 28 GSPGIPGTPGSHGLPGRDGRDGLKGDPGPPGPMGPPGEMPCP--PGNDGLPGAPGIPGEC 85
GSPG+PG G+ G PG G G+ G PGPPGP+G PG P G+DGL G PG+PG
Sbjct: 878 GSPGLPGKAGASGFPGTKGEMGMMGPPGPPGPLGIPGRSGVPGLKGDDGLQGQPGLPGPT 937
Query: 86 GEKGEPGERGPPGLPAHLDEEL 107
GEKG GE G PG P +D L
Sbjct: 938 GEKGSKGEPGLPGPPGPMDPNL 959
Score = 89.0 bits (219), Expect = 3e-18
Identities = 46/84 (54%), Positives = 50/84 (59%), Gaps = 6/84 (7%)
Query: 23 KDVCVGSPGIPGTPGSHGLPGRDGRDGLKGDPGPPGPMGPPGEMPCPPGND------GLP 76
KD G PGIPG PG G PG GRDG KG G GP GPPG + PG G
Sbjct: 302 KDGENGQPGIPGLPGDPGYPGEPGRDGEKGQKGDTGPPGPPGLVIPRPGTGITIGEKGNI 361
Query: 77 GAPGIPGECGEKGEPGERGPPGLP 100
G PG+PGE GE+G PG +GPPGLP
Sbjct: 362 GLPGLPGEKGERGFPGIQGPPGLP 385
Score = 86.7 bits (213), Expect = 2e-17
Identities = 46/99 (46%), Positives = 51/99 (51%), Gaps = 25/99 (25%)
Query: 27 VGSPGIPGTPGSHGLPGRDGRDGLKGDPGPPGP---MGPPGE-----------------M 66
VG PG+PG PG+ G G+ G G G PGPPGP GPPG
Sbjct: 1100 VGDPGLPGLPGTPGAKGQPGLPGFPGTPGPPGPKGISGPPGNPGLPGEPGPVGGGGHPGQ 1159
Query: 67 PCPPGNDGLPGAPGIPGECGEKGEPGE-----RGPPGLP 100
P PPG G PG GIPG G+KGEPG+ GPPGLP
Sbjct: 1160 PGPPGEKGKPGQDGIPGPAGQKGEPGQPGFGNPGPPGLP 1198
Score = 84.3 bits (207), Expect = 9e-17
Identities = 41/72 (56%), Positives = 46/72 (63%), Gaps = 1/72 (1%)
Query: 28 GSPGIPGTPGSHGLPGRDGRDGLKGDPGPPGPMGPPG-EMPCPPGNDGLPGAPGIPGECG 86
G PGIPG PG+ G PGR G +G G PG PGP G PG +P PPG GLPG G G G
Sbjct: 716 GFPGIPGPPGAPGTPGRIGLEGPPGPPGFPGPKGEPGFALPGPPGPPGLPGFKGALGPKG 775
Query: 87 EKGEPGERGPPG 98
++G PG GPPG
Sbjct: 776 DRGFPGPPGPPG 787
Score = 82.4 bits (202), Expect = 3e-16
Identities = 43/81 (53%), Positives = 48/81 (59%), Gaps = 6/81 (7%)
Query: 28 GSPGIPGTPGSHGLPGRDGRDGLKGDPGPPGPMGPPGE--MPCPPGNDGLPGAPGIPGEC 85
G+PG PG PG GLPG G G G PGPPG MGPPG +P P GN GL G
Sbjct: 171 GNPGYPGPPGIQGLPGPTGIPGPIGPPGPPGLMGPPGPPGLPGPKGNMGL----NFQGPK 226
Query: 86 GEKGEPGERGPPGLPAHLDEE 106
GEKGE G +GPPG P + E+
Sbjct: 227 GEKGEQGLQGPPGPPGQISEQ 247
Score = 80.9 bits (198), Expect = 9e-16
Identities = 46/89 (51%), Positives = 50/89 (56%), Gaps = 13/89 (14%)
Query: 28 GSPGIPGTPGSHGLPGRDGRDGLKGDPGPPG--PMGPPGE-----MPCPPGNDGLPGAPG 80
G PG PG PG G PG G G KGDPGPPG GPPGE +P PG G PG+PG
Sbjct: 822 GPPGPPGIPGPIGQPGLHGIPGEKGDPGPPGLDVPGPPGERGSPGIPGAPGPIGPPGSPG 881
Query: 81 IPGEC------GEKGEPGERGPPGLPAHL 103
+PG+ G KGE G GPPG P L
Sbjct: 882 LPGKAGASGFPGTKGEMGMMGPPGPPGPL 910
Score = 80.1 bits (196), Expect = 2e-15
Identities = 43/84 (51%), Positives = 47/84 (55%), Gaps = 11/84 (13%)
Query: 28 GSPGIPGTPGSHGLPGRDGRDGLKGDPGPPGP---MGPPG--------EMPCPPGNDGLP 76
G PG+PG PG G PG G+ G G PGPPGP GPPG +P PG+DG P
Sbjct: 57 GHPGLPGFPGPEGPPGPRGQKGDDGIPGPPGPKGIRGPPGLPGFPGTPGLPGMPGHDGAP 116
Query: 77 GAPGIPGECGEKGEPGERGPPGLP 100
G GIPG G KGE G G PG P
Sbjct: 117 GPQGIPGCNGTKGERGFPGSPGFP 140
Score = 78.2 bits (191), Expect = 6e-15
Identities = 40/75 (53%), Positives = 47/75 (62%), Gaps = 6/75 (8%)
Query: 28 GSPGIPGTPGSHGLPGRDGRDGLKGDPGPPGPMGPPGEMPCPPGNDGLPGAPGIPGECGE 87
G+PG+PG PG G PG G G G PGP G GPPG P G G PG+PG+PG+ G+
Sbjct: 1009 GNPGLPGQPGLIGPPGLKGTIGDMGFPGPQGVEGPPG----PSGVPGQPGSPGLPGQKGD 1064
Query: 88 KGEPG--ERGPPGLP 100
KG+PG G PGLP
Sbjct: 1065 KGDPGISSIGLPGLP 1079
Score = 77.8 bits (190), Expect = 8e-15
Identities = 41/81 (50%), Positives = 43/81 (53%), Gaps = 8/81 (9%)
Query: 28 GSPGIPGTPGSHGLPGRDGRDGLKGDPGPPGPMGPPGE--------MPCPPGNDGLPGAP 79
G PG GT G G PG G GL+G PGPPG G GE +P P GN G PG P
Sbjct: 120 GIPGCNGTKGERGFPGSPGFPGLQGPPGPPGIPGMKGEPGSIIMSSLPGPKGNPGYPGPP 179
Query: 80 GIPGECGEKGEPGERGPPGLP 100
GI G G G PG GPPG P
Sbjct: 180 GIQGLPGPTGIPGPIGPPGPP 200
Score = 77.8 bits (190), Expect = 8e-15
Identities = 44/89 (49%), Positives = 47/89 (52%), Gaps = 16/89 (17%)
Query: 28 GSPGIPGTPGSHGLPGRDGRDGLKGDPGPPGPMGPPG------EMP-------CPPGNDG 74
G G+PG PG+ GLPG G G G PG GP GPPG E P PPG G
Sbjct: 1205 GDGGLPGIPGNPGLPGPKGEPGFHGFPGVQGPPGPPGSPGPALEGPKGNPGPQGPPGRPG 1264
Query: 75 LP---GAPGIPGECGEKGEPGERGPPGLP 100
LP G PG+PG G KGE G G PGLP
Sbjct: 1265 LPGPEGPPGLPGNGGIKGEKGNPGQPGLP 1293
Score = 77.4 bits (189), Expect = 1e-14
Identities = 41/95 (43%), Positives = 48/95 (50%), Gaps = 21/95 (22%)
Query: 28 GSPGIPGTPGSHGLPGRDGRDGLKGDPGPPGPMGPPGEMPCPPGNDGLPGAPGIPGECGE 87
G PG PG PG G+ G G GL G+PGP G G PG+ P PPG G PG GIPG G+
Sbjct: 1122 GFPGTPGPPGPKGISGPPGNPGLPGEPGPVGGGGHPGQ-PGPPGEKGKPGQDGIPGPAGQ 1180
Query: 88 KGEPGERG--------------------PPGLPAH 102
KGEPG+ G PG+P +
Sbjct: 1181 KGEPGQPGFGNPGPPGLPGLSGQKGDGGLPGIPGN 1215
Score = 77.0 bits (188), Expect = 1e-14
Identities = 48/94 (51%), Positives = 50/94 (53%), Gaps = 17/94 (18%)
Query: 23 KDVCVGSPGIPGTPGSHGLPGRDGRDGLKGD-----PGPPGPMGPPGEMPCPPGNDGLP- 76
+D VG PG PG PG GLPG G G G PGPPGP G PG +P PPG G P
Sbjct: 673 RDGDVGLPGDPGLPGQPGLPGIPGSKGEPGIPGIGLPGPPGPKGFPG-IPGPPGAPGTPG 731
Query: 77 -----GAPGIPGECGEKGE-----PGERGPPGLP 100
G PG PG G KGE PG GPPGLP
Sbjct: 732 RIGLEGPPGPPGFPGPKGEPGFALPGPPGPPGLP 765
Score = 76.6 bits (187), Expect = 2e-14
Identities = 43/91 (47%), Positives = 49/91 (53%), Gaps = 15/91 (16%)
Query: 28 GSPGIPGTPGSHGLPGRDGRDG-------LKGDPGPPGPMGPPG--EMPCPPGNDGLPGA 78
G PGIPG PG+ G PG G G +KGD G G G PG +P PG DGLPG
Sbjct: 527 GLPGIPGAPGAPGFPGSKGEPGDILTFPGMKGDKGELGSPGAPGLPGLPGTPGQDGLPGL 586
Query: 79 PGIPGECG------EKGEPGERGPPGLPAHL 103
PG GE G E+G PG G PGLP ++
Sbjct: 587 PGPKGEPGGITFKGERGPPGNPGLPGLPGNI 617
Score = 76.6 bits (187), Expect = 2e-14
Identities = 39/74 (52%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Query: 27 VGSPGIPGTPGSHGLPGRDGRDGLKGDPGPPGPMGPPGEMPCPPGNDGLPGAPGIPGECG 86
+G PG+PG G GLPG G G+KG G PG G PG P G GLPG PG PG G
Sbjct: 1073 IGLPGLPGPKGEPGLPGYPGNPGIKGSVGDPGLPGLPG-TPGAKGQPGLPGFPGTPGPPG 1131
Query: 87 EKGEPGERGPPGLP 100
KG G G PGLP
Sbjct: 1132 PKGISGPPGNPGLP 1145
Score = 75.9 bits (185), Expect = 3e-14
Identities = 43/87 (49%), Positives = 46/87 (52%), Gaps = 13/87 (14%)
Query: 26 CVGSPGIPGTPGSHGLPGRDGR------DGLKGDPGP------PGPMGPPGEMPCPPGND 73
C G+ G G PGS G PG G G+KG+PG PGP G PG P PPG
Sbjct: 124 CNGTKGERGFPGSPGFPGLQGPPGPPGIPGMKGEPGSIIMSSLPGPKGNPG-YPGPPGIQ 182
Query: 74 GLPGAPGIPGECGEKGEPGERGPPGLP 100
GLPG GIPG G G PG GPPG P
Sbjct: 183 GLPGPTGIPGPIGPPGPPGLMGPPGPP 209
Score = 75.1 bits (183), Expect = 5e-14
Identities = 44/83 (53%), Positives = 48/83 (57%), Gaps = 10/83 (12%)
Query: 27 VGSPGIPGTPGSHGLPGRDGRDGL---KGDPGP---PGPMGPPG----EMPCPPGNDGLP 76
+G G G PG G PGR G DGL KGD GP PGPMGPPG + PPG G+P
Sbjct: 771 LGPKGDRGFPGPPGPPGRTGLDGLPGPKGDVGPNGQPGPMGPPGLPGIGVQGPPGPPGIP 830
Query: 77 GAPGIPGECGEKGEPGERGPPGL 99
G G PG G GE G+ GPPGL
Sbjct: 831 GPIGQPGLHGIPGEKGDPGPPGL 853
Score = 75.1 bits (183), Expect = 5e-14
Identities = 39/75 (52%), Positives = 43/75 (57%), Gaps = 3/75 (4%)
Query: 28 GSPGIPGTPGSHGLPGRDGRDGLKGDPGPPGPMGPPGEMPCPPGNDGLPGAPGIPGEC-- 85
G+PG PG PG G G G G+ G+PG PGP G PG PG G PG PG PG
Sbjct: 1190 GNPGPPGLPGLSGQKGDGGLPGIPGNPGLPGPKGEPG-FHGFPGVQGPPGPPGSPGPALE 1248
Query: 86 GEKGEPGERGPPGLP 100
G KG PG +GPPG P
Sbjct: 1249 GPKGNPGPQGPPGRP 1263
Score = 74.7 bits (182), Expect = 7e-14
Identities = 37/73 (50%), Positives = 42/73 (57%), Gaps = 1/73 (1%)
Query: 28 GSPGIPGTPGSHGLPGRDGRDGLKGDPGPPGPMGPPGEMPCPPGNDGLPGAPGIPGECGE 87
G PG+ G G GLPG G+ GL G PG PGP GP G P PG GL G PG+ G G+
Sbjct: 973 GIPGVSGPKGYQGLPGDPGQPGLSGQPGLPGPPGPKGN-PGLPGQPGLIGPPGLKGTIGD 1031
Query: 88 KGEPGERGPPGLP 100
G PG +G G P
Sbjct: 1032 MGFPGPQGVEGPP 1044
Score = 74.7 bits (182), Expect = 7e-14
Identities = 39/79 (49%), Positives = 45/79 (56%), Gaps = 6/79 (7%)
Query: 28 GSPGIPGTPGSHGLPGRDGRDGLKGDPGPPGPMGPPGE--MPCPPGND----GLPGAPGI 81
G PG+PG PG G+ G G G G G PG +GPPG +P P G G G PGI
Sbjct: 1321 GDPGLPGVPGFPGMKGPSGVPGSAGPEGEPGLIGPPGPPGLPGPSGQSIIIKGDAGPPGI 1380
Query: 82 PGECGEKGEPGERGPPGLP 100
PG+ G KG PG +GP GLP
Sbjct: 1381 PGQPGLKGLPGPQGPQGLP 1399
Score = 74.3 bits (181), Expect = 9e-14
Identities = 39/87 (44%), Positives = 47/87 (54%), Gaps = 14/87 (16%)
Query: 28 GSPGIPGTPGS--------HGLPGRDGRDGLKG------DPGPPGPMGPPGEMPCPPGND 73
G+PG+PG PG+ G PG G G++G PG PGP G PG+ PG
Sbjct: 606 GNPGLPGLPGNIGPMGPPGFGPPGPVGEKGIQGVAGNPGQPGIPGPKGDPGQTITQPGKP 665
Query: 74 GLPGAPGIPGECGEKGEPGERGPPGLP 100
GLPG PG G+ G G+PG G PGLP
Sbjct: 666 GLPGNPGRDGDVGLPGDPGLPGQPGLP 692
Score = 74.3 bits (181), Expect = 9e-14
Identities = 42/76 (55%), Positives = 45/76 (59%), Gaps = 9/76 (11%)
Query: 27 VGSPGIPGTPGSHGLPGRDGRDGLKGDPGPPGPMGPPGEMPCPPGNDGLPGAPGI--PGE 84
+ PG PG PG+ PGRDG GL GDPG PG G PG PG+ G PG PGI PG
Sbjct: 659 ITQPGKPGLPGN---PGRDGDVGLPGDPGLPGQPGLPG----IPGSKGEPGIPGIGLPGP 711
Query: 85 CGEKGEPGERGPPGLP 100
G KG PG GPPG P
Sbjct: 712 PGPKGFPGIPGPPGAP 727
Score = 74.3 bits (181), Expect = 9e-14
Identities = 40/80 (50%), Positives = 42/80 (52%), Gaps = 7/80 (8%)
Query: 28 GSPGIPGTPGSH---GLPGRDGRDGLKGDPGPPGPMGPPG----EMPCPPGNDGLPGAPG 80
G PG+PG PG GLPG G G G PG PG G PG +P PPG G PG PG
Sbjct: 663 GKPGLPGNPGRDGDVGLPGDPGLPGQPGLPGIPGSKGEPGIPGIGLPGPPGPKGFPGIPG 722
Query: 81 IPGECGEKGEPGERGPPGLP 100
PG G G G GPPG P
Sbjct: 723 PPGAPGTPGRIGLEGPPGPP 742
Score = 73.9 bits (180), Expect = 1e-13
Identities = 42/85 (49%), Positives = 45/85 (52%), Gaps = 12/85 (14%)
Query: 27 VGSPGIPGTPGSHGLPGRDGRDGLKGDPGPPGPMGPPGEMPCPPGNDGLPGAP------- 79
+GSPG PG PG G PG+DG GL G G PG + GE PPGN GLPG P
Sbjct: 563 LGSPGAPGLPGLPGTPGQDGLPGLPGPKGEPGGITFKGERG-PPGNPGLPGLPGNIGPMG 621
Query: 80 ----GIPGECGEKGEPGERGPPGLP 100
G PG GEKG G G PG P
Sbjct: 622 PPGFGPPGPVGEKGIQGVAGNPGQP 646
Score = 73.9 bits (180), Expect = 1e-13
Identities = 43/79 (54%), Positives = 46/79 (58%), Gaps = 8/79 (10%)
Query: 28 GSPGIPGTPGSHGLPGRDGRDGLKGDPGP---PGPMGPPGEMPCPPGNDGLPGAPGIPGE 84
G G PG PG G G DG G KGD GP PGPMGPPG +P G G PG PGIPG
Sbjct: 775 GDRGFPGPPGPPGRTGLDGLPGPKGDVGPNGQPGPMGPPG-LP-GIGVQGPPGPPGIPGP 832
Query: 85 CGE---KGEPGERGPPGLP 100
G+ G PGE+G PG P
Sbjct: 833 IGQPGLHGIPGEKGDPGPP 851
Score = 73.6 bits (179), Expect = 2e-13
Identities = 39/82 (47%), Positives = 43/82 (52%), Gaps = 9/82 (10%)
Query: 27 VGSPGIPGTPGSHGLPGRDGRD--------GLKGDPGPPGPMGPPGEMPCPPGNDGLPGA 78
+G PG+ G PG G PG G D G G PG PGP+GPPG P PG G G
Sbjct: 833 IGQPGLHGIPGEKGDPGPPGLDVPGPPGERGSPGIPGAPGPIGPPGS-PGLPGKAGASGF 891
Query: 79 PGIPGECGEKGEPGERGPPGLP 100
PG GE G G PG GP G+P
Sbjct: 892 PGTKGEMGMMGPPGPPGPLGIP 913
Score = 73.6 bits (179), Expect = 2e-13
Identities = 39/82 (47%), Positives = 44/82 (53%), Gaps = 9/82 (10%)
Query: 28 GSPGIPGTPGSHGLPGR---DGRDGLKGDPGPPGPMGPPGEM------PCPPGNDGLPGA 78
G PG PG G G+PG +G GL G PGPPG GP G+ PPG G PG
Sbjct: 1327 GVPGFPGMKGPSGVPGSAGPEGEPGLIGPPGPPGLPGPSGQSIIIKGDAGPPGIPGQPGL 1386
Query: 79 PGIPGECGEKGEPGERGPPGLP 100
G+PG G +G PG GPPG P
Sbjct: 1387 KGLPGPQGPQGLPGPTGPPGDP 1408
Score = 73.2 bits (178), Expect = 2e-13
Identities = 46/94 (48%), Positives = 49/94 (52%), Gaps = 16/94 (17%)
Query: 28 GSPGIPGT----------PGSHGLPGRDGRDGLKGDPGPPGPMGPPGEMPCPPGNDGLPG 77
G PGIPG PG GLPG GRDG G PG PG G PG +P PG+ G PG
Sbjct: 644 GQPGIPGPKGDPGQTITQPGKPGLPGNPGRDGDVGLPGDPGLPGQPG-LPGIPGSKGEPG 702
Query: 78 APGI--PGECGEKGEPGERGP---PGLPAHLDEE 106
PGI PG G KG PG GP PG P + E
Sbjct: 703 IPGIGLPGPPGPKGFPGIPGPPGAPGTPGRIGLE 736
Score = 73.2 bits (178), Expect = 2e-13
Identities = 38/75 (50%), Positives = 42/75 (56%), Gaps = 1/75 (1%)
Query: 28 GSPGIPGTPGSHGLPGRDGRDGLKGDPGPPGPMGPPGEMPCPPGNDGLPGAPGIPGECGE 87
G PG+PG PG+ G+ G G GL G PG PG G PG +P PG G PG GI G G
Sbjct: 1083 GEPGLPGYPGNPGIKGSVGDPGLPGLPGTPGAKGQPG-LPGFPGTPGPPGPKGISGPPGN 1141
Query: 88 KGEPGERGPPGLPAH 102
G PGE GP G H
Sbjct: 1142 PGLPGEPGPVGGGGH 1156
Score = 72.8 bits (177), Expect = 3e-13
Identities = 41/89 (46%), Positives = 44/89 (49%), Gaps = 16/89 (17%)
Query: 28 GSPGIPGTPGSHGLPGRDGRDGLKGDPGPPGPMGPPGE-----MPCPPG----------- 71
G PG G PG G+PG G DGL+G PG PGP G G +P PPG
Sbjct: 905 GPPGPLGIPGRSGVPGLKGDDGLQGQPGLPGPTGEKGSKGEPGLPGPPGPMDPNLLGSKG 964
Query: 72 NDGLPGAPGIPGECGEKGEPGERGPPGLP 100
G PG PGIPG G KG G G PG P
Sbjct: 965 EKGEPGLPGIPGVSGPKGYQGLPGDPGQP 993
Score = 72.0 bits (175), Expect = 4e-13
Identities = 45/98 (45%), Positives = 50/98 (51%), Gaps = 8/98 (8%)
Query: 6 LALNLILMAASGAVC---EVKDVCVGSPGIPGTPGSHGLPGRDGRDGLKGDPGPPGPMGP 62
LAL+L A A C C S GI G G G PG +G GL G PGP GP GP
Sbjct: 15 LALSLWGQPAEAAACYGCSPGSKCDCS-GIKGEKGERGFPGLEGHPGLPGFPGPEGPPGP 73
Query: 63 PGEMPCPPGNDGLPGAPGIPGECGEKGEPGERGPPGLP 100
G+ G+DG+PG PG G G G PG G PGLP
Sbjct: 74 RGQ----KGDDGIPGPPGPKGIRGPPGLPGFPGTPGLP 107
Score = 72.0 bits (175), Expect = 4e-13
Identities = 39/74 (52%), Positives = 43/74 (58%), Gaps = 4/74 (5%)
Query: 28 GSPGIPGTPGSHGLPGRDGRDGLKGDPGPPGPMGPPGEMPCPP---GNDGLPGAPGIPGE 84
G G PG PG G+ G G GL GDPG PG G PG +P PP GN GLPG PG+ G
Sbjct: 964 GEKGEPGLPGIPGVSGPKGYQGLPGDPGQPGLSGQPG-LPGPPGPKGNPGLPGQPGLIGP 1022
Query: 85 CGEKGEPGERGPPG 98
G KG G+ G PG
Sbjct: 1023 PGLKGTIGDMGFPG 1036
Score = 72.0 bits (175), Expect = 4e-13
Identities = 38/73 (52%), Positives = 42/73 (57%), Gaps = 1/73 (1%)
Query: 28 GSPGIPGTPGSHGLPGRDGRDGLKGDPGPPGPMGPPGEMPCPPGNDGLPGAPGIPGECGE 87
G PG+PG G GLPG G G KG+PG PG G PG + G GL G PG PG G
Sbjct: 1261 GRPGLPGPEGPPGLPGNGGIKGEKGNPGQPGLPGLPG-LKGDQGPPGLQGNPGRPGLNGM 1319
Query: 88 KGEPGERGPPGLP 100
KG+PG G PG P
Sbjct: 1320 KGDPGLPGVPGFP 1332
Score = 72.0 bits (175), Expect = 4e-13
Identities = 40/81 (49%), Positives = 42/81 (51%), Gaps = 11/81 (13%)
Query: 28 GSPGIPGTPGSHGLPGRDGRDGLKGDPGPPGPMGPPGEMPCP--------PGNDGLPGAP 79
G PGIPG PG GLPG G GL PGP GP G PG P G+ GLPG P
Sbjct: 1376 GPPGIPGQPGLKGLPGPQGPQGL---PGPTGPPGDPGRNGLPGFDGAGGRKGDPGLPGQP 1432
Query: 80 GIPGECGEKGEPGERGPPGLP 100
G G G G G +GPPG P
Sbjct: 1433 GTRGLDGPPGPDGLQGPPGPP 1453
Score = 71.6 bits (174), Expect = 6e-13
Identities = 40/84 (47%), Positives = 47/84 (55%), Gaps = 10/84 (11%)
Query: 24 DVCVGSPGIPGTPGSHGLPGRDGRDGLKGDPGPP-------GPMGPPGEMPCPPGNDGLP 76
++C PG PG PGS G G G G+KGD G G GPPG+ P PG G P
Sbjct: 449 EIC--EPGPPGPPGSPGDKGLQGEQGVKGDKGDTCFNCIGTGISGPPGQ-PGLPGLPGPP 505
Query: 77 GAPGIPGECGEKGEPGERGPPGLP 100
G+ G PG+ GEKG+ G GP GLP
Sbjct: 506 GSLGFPGQKGEKGQAGATGPKGLP 529
Score = 70.9 bits (172), Expect = 1e-12
Identities = 41/102 (40%), Positives = 45/102 (44%), Gaps = 29/102 (28%)
Query: 28 GSPGIPGTPGSHGLPGRDGR------------------DGLKGDPGPPGPMGPPGE---- 65
G PG PG PG G PG G GLKGD GPPG G PG
Sbjct: 1258 GPPGRPGLPGPEGPPGLPGNGGIKGEKGNPGQPGLPGLPGLKGDQGPPGLQGNPGRPGLN 1317
Query: 66 -------MPCPPGNDGLPGAPGIPGECGEKGEPGERGPPGLP 100
+P PG G+ G G+PG G +GEPG GPPG P
Sbjct: 1318 GMKGDPGLPGVPGFPGMKGPSGVPGSAGPEGEPGLIGPPGPP 1359
Score = 70.5 bits (171), Expect = 1e-12
Identities = 38/80 (47%), Positives = 44/80 (55%), Gaps = 8/80 (10%)
Query: 28 GSPGIPGTPGSHGLPGRDGRDGLKGDPGPPGPMGPPGEMPCPPGNDGLPGAPGIPGEC-- 85
G PG+PG PG G G G+ G KG G GP G PG +P PG G PG+ G PG+
Sbjct: 494 GQPGLPGLPGPPGSLGFPGQKGEKGQAGATGPKGLPG-IPGAPGAPGFPGSKGEPGDILT 552
Query: 86 -----GEKGEPGERGPPGLP 100
G+KGE G G PGLP
Sbjct: 553 FPGMKGDKGELGSPGAPGLP 572
Score = 70.5 bits (171), Expect = 1e-12
Identities = 42/98 (42%), Positives = 48/98 (48%), Gaps = 25/98 (25%)
Query: 27 VGSPGIPGTPGSHGLPGRDGRDGLKGD------PGPPGPMGPPGE-----MPCPP----- 70
+G G PG PG G+PGR G GLKGD PG PGP G G +P PP
Sbjct: 898 MGMMGPPGPPGPLGIPGRSGVPGLKGDDGLQGQPGLPGPTGEKGSKGEPGLPGPPGPMDP 957
Query: 71 ---------GNDGLPGAPGIPGECGEKGEPGERGPPGL 99
G GLPG PG+ G G +G PG+ G PGL
Sbjct: 958 NLLGSKGEKGEPGLPGIPGVSGPKGYQGLPGDPGQPGL 995
Score = 69.7 bits (169), Expect = 2e-12
Identities = 41/89 (46%), Positives = 45/89 (50%), Gaps = 17/89 (19%)
Query: 28 GSPGIPGTPGSHGLPGRDGRDGLKGDPGPPGPMGPPGE--MPCPPGNDGL------PGAP 79
G PG+PG PG+ GLPG G DG G G PG G GE P PG GL PG P
Sbjct: 93 GPPGLPGFPGTPGLPGMPGHDGAPGPQGIPGCNGTKGERGFPGSPGFPGLQGPPGPPGIP 152
Query: 80 GIPGECGE---------KGEPGERGPPGL 99
G+ GE G KG PG GPPG+
Sbjct: 153 GMKGEPGSIIMSSLPGPKGNPGYPGPPGI 181
Score = 68.6 bits (166), Expect = 5e-12
Identities = 52/161 (32%), Positives = 56/161 (34%), Gaps = 82/161 (50%)
Query: 28 GSPGIPGTPGSHGLPGRDGRDGLKGDPGPPGP---------------------------- 59
G PG+PG PG G PGRDG G KGD GPPGP
Sbjct: 310 GIPGLPGDPGYPGEPGRDGEKGQKGDTGPPGPPGLVIPRPGTGITIGEKGNIGLPGLPGE 369
Query: 60 ---------------MGPPG---------------------------EMPCPPGNDGLPG 77
GPPG +P PPG DG PG
Sbjct: 370 KGERGFPGIQGPPGLPGPPGAAVMGPPGPPGFPGERGQKGDEGPPGISIPGPPGLDGQPG 429
Query: 78 APGIPGECGEKG----------EPGERGPPGLPAHLDEELQ 108
APG+PG G G EPG GPPG P D+ LQ
Sbjct: 430 APGLPGPPGPAGPHIPPSDEICEPGPPGPPGSPG--DKGLQ 468
Score = 68.2 bits (165), Expect = 6e-12
Identities = 39/86 (45%), Positives = 45/86 (52%), Gaps = 14/86 (16%)
Query: 28 GSPGIPGTPGSHGLPGRDGRDGLKGDPGPPGPMGPPGEMPCPPGNDGLPGAP---GIPGE 84
G PGI PG GL G+ G GL G PGP GP PP + C PG G PG+P G+ GE
Sbjct: 412 GPPGI-SIPGPPGLDGQPGAPGLPGPPGPAGPHIPPSDEICEPGPPGPPGSPGDKGLQGE 470
Query: 85 CGEKGEPGE----------RGPPGLP 100
G KG+ G+ GPPG P
Sbjct: 471 QGVKGDKGDTCFNCIGTGISGPPGQP 496
Score = 68.2 bits (165), Expect = 6e-12
Identities = 46/112 (41%), Positives = 49/112 (43%), Gaps = 39/112 (34%)
Query: 28 GSPGIPGTPGSHGLPGRDGRDG---------LKGDPGPPGPMGPPGE------------- 65
G PG+PG PGS G PG+ G G L G PG PG G PG
Sbjct: 497 GLPGLPGPPGSLGFPGQKGEKGQAGATGPKGLPGIPGAPGAPGFPGSKGEPGDILTFPGM 556
Query: 66 --------MPCPPGNDGLPGAP---GIPGECGEKGEP------GERGPPGLP 100
P PG GLPG P G+PG G KGEP GERGPPG P
Sbjct: 557 KGDKGELGSPGAPGLPGLPGTPGQDGLPGLPGPKGEPGGITFKGERGPPGNP 608
Score = 67.4 bits (163), Expect = 1e-11
Identities = 42/85 (49%), Positives = 44/85 (51%), Gaps = 16/85 (18%)
Query: 28 GSPGIPGTPGSHGLPGRDGRDGLKGDPGP------PGPMGPPGEMPCPPGNDGL------ 75
G PG PG PG G PG G G+KG+PG PGP G PG P PPG GL
Sbjct: 132 GFPGSPGFPGLQGPPGPPGIPGMKGEPGSIIMSSLPGPKGNPG-YPGPPGIQGLPGPTGI 190
Query: 76 PGAPGIPGECGEKGEPGERGPPGLP 100
PG G PG G G P GPPGLP
Sbjct: 191 PGPIGPPGPPGLMGPP---GPPGLP 212
Score = 67.4 bits (163), Expect = 1e-11
Identities = 44/109 (40%), Positives = 52/109 (47%), Gaps = 36/109 (33%)
Query: 27 VGSPGIPGT---------------PGSHGLPGRDGRDGL---KGD-----------PGPP 57
+G PG+ GT PG G+PG+ G GL KGD PG P
Sbjct: 1020 IGPPGLKGTIGDMGFPGPQGVEGPPGPSGVPGQPGSPGLPGQKGDKGDPGISSIGLPGLP 1079
Query: 58 GPMGPPGEMPCPPGNDGL------PGAPGIPGECGEKGEPGERGPPGLP 100
GP G PG +P PGN G+ PG PG+PG G KG+PG G PG P
Sbjct: 1080 GPKGEPG-LPGYPGNPGIKGSVGDPGLPGLPGTPGAKGQPGLPGFPGTP 1127
Score = 67.4 bits (163), Expect = 1e-11
Identities = 38/81 (46%), Positives = 45/81 (55%), Gaps = 9/81 (11%)
Query: 28 GSPGIPGTPGSHGLPGRDGRDGLKGDPGPP---GPMGPP-----GEMPCPPGNDGLPGAP 79
G PG PG+PG L G G G +G PG P GP GPP G + GN G PG P
Sbjct: 1235 GPPGPPGSPGP-ALEGPKGNPGPQGPPGRPGLPGPEGPPGLPGNGGIKGEKGNPGQPGLP 1293
Query: 80 GIPGECGEKGEPGERGPPGLP 100
G+PG G++G PG +G PG P
Sbjct: 1294 GLPGLKGDQGPPGLQGNPGRP 1314
Score = 66.6 bits (161), Expect = 2e-11
Identities = 43/106 (40%), Positives = 48/106 (45%), Gaps = 22/106 (20%)
Query: 16 SGAVCEVKDVCVGSPGIPGTPGSHGLPGRDGRDGLKGDP----------GPPGPMGPPGE 65
S +CE G PG PG+PG GL G G G KGD GPPG G PG
Sbjct: 447 SDEICEP-----GPPGPPGSPGDKGLQGEQGVKGDKGDTCFNCIGTGISGPPGQPGLPG- 500
Query: 66 MPCPPGNDGLPGAPGIPGECGEKGE------PGERGPPGLPAHLDE 105
+P PPG+ G PG G G+ G G PG G PG P E
Sbjct: 501 LPGPPGSLGFPGQKGEKGQAGATGPKGLPGIPGAPGAPGFPGSKGE 546
Score = 66.6 bits (161), Expect = 2e-11
Identities = 38/89 (42%), Positives = 45/89 (50%), Gaps = 20/89 (22%)
Query: 27 VGSPGIPGTPGSHG-------------LPGRDGRDGLKGDPGP---PGPMGPPGEMPCPP 70
+G PG PG PG G +PG+ G GL G GP PGP GPPG+ P
Sbjct: 1353 IGPPGPPGLPGPSGQSIIIKGDAGPPGIPGQPGLKGLPGPQGPQGLPGPTGPPGD----P 1408
Query: 71 GNDGLPGAPGIPGECGEKGEPGERGPPGL 99
G +GLPG G G G+ G PG+ G GL
Sbjct: 1409 GRNGLPGFDGAGGRKGDPGLPGQPGTRGL 1437
Score = 65.5 bits (158), Expect = 4e-11
Identities = 44/108 (40%), Positives = 50/108 (46%), Gaps = 36/108 (33%)
Query: 27 VGSPGIP---GTPGSHGLPGRDGRDGL--------KGDPGPPGPMGPPGEM--------- 66
+G PG P G PG GLPG G GL KG+ G GP GPPG++
Sbjct: 194 IGPPGPPGLMGPPGPPGLPGPKGNMGLNFQGPKGEKGEQGLQGPPGPPGQISEQKRPIDV 253
Query: 67 ---------------PCPPGNDGLPGAP-GIPGECGEKGEPGERGPPG 98
P PPG G PG P G GE GE+GEPG+RG PG
Sbjct: 254 EFQKGDQGLPGDRGPPGPPGIRGPPGPPGGEKGEKGEQGEPGKRGKPG 301
Score = 65.5 bits (158), Expect = 4e-11
Identities = 44/101 (43%), Positives = 50/101 (49%), Gaps = 26/101 (25%)
Query: 28 GSPGIPGTPGSHGLPGRDGRDG------LKGDPGPPGP------------MGPPGEMPCP 69
G PG+PGTPG GLPG G G KG+ GPPG MGPPG P
Sbjct: 570 GLPGLPGTPGQDGLPGLPGPKGEPGGITFKGERGPPGNPGLPGLPGNIGPMGPPGFGPPG 629
Query: 70 P----GNDGLPGAPGIPGECGEKGEPGER----GPPGLPAH 102
P G G+ G PG PG G KG+PG+ G PGLP +
Sbjct: 630 PVGEKGIQGVAGNPGQPGIPGPKGDPGQTITQPGKPGLPGN 670
Score = 61.2 bits (147), Expect = 8e-10
Identities = 37/88 (42%), Positives = 41/88 (46%), Gaps = 10/88 (11%)
Query: 28 GSPGIPGTPGSHGLP-------GRDGRDGLKGDPGPPG---PMGPPGEMPCPPGNDGLPG 77
G PG PG P G G G +G PGPPG P GPPG G G PG
Sbjct: 236 GPPGPPGQISEQKRPIDVEFQKGDQGLPGDRGPPGPPGIRGPPGPPGGEKGEKGEQGEPG 295
Query: 78 APGIPGECGEKGEPGERGPPGLPAHLDE 105
G PG+ GE G+PG G PG P + E
Sbjct: 296 KRGKPGKDGENGQPGIPGLPGDPGYPGE 323
Score = 60.8 bits (146), Expect = 1e-09
Identities = 43/128 (33%), Positives = 49/128 (38%), Gaps = 45/128 (35%)
Query: 27 VGSPGIPGTPGSHGL--------------PGRDGRDGLKGDPGPPGPMGP---PGEMPCP 69
+G PG PG PG G PG DG+ G G PGPPGP GP P + C
Sbjct: 393 MGPPGPPGFPGERGQKGDEGPPGISIPGPPGLDGQPGAPGLPGPPGPAGPHIPPSDEICE 452
Query: 70 PGNDGLPGAPGI----------------------------PGECGEKGEPGERGPPGLPA 101
PG G PG+PG PG+ G G PG G G P
Sbjct: 453 PGPPGPPGSPGDKGLQGEQGVKGDKGDTCFNCIGTGISGPPGQPGLPGLPGPPGSLGFPG 512
Query: 102 HLDEELQA 109
E+ QA
Sbjct: 513 QKGEKGQA 520
Score = 50.1 bits (118), Expect = 2e-06
Identities = 20/31 (64%), Positives = 23/31 (74%)
Query: 28 GSPGIPGTPGSHGLPGRDGRDGLKGDPGPPG 58
G PG+PG PG+ GL G G DGL+G PGPPG
Sbjct: 1424 GDPGLPGQPGTRGLDGPPGPDGLQGPPGPPG 1454
Score = 46.2 bits (108), Expect = 3e-05
Identities = 25/55 (45%), Positives = 26/55 (47%), Gaps = 18/55 (32%)
Query: 28 GSPGIPGTPGSHGLPGRDGRDGLKGDPGPPG------------------PMGPPG 64
G G PG PG +GLPG DG G KGDPG PG P GPPG
Sbjct: 1400 GPTGPPGDPGRNGLPGFDGAGGRKGDPGLPGQPGTRGLDGPPGPDGLQGPPGPPG 1454
>gi|15890088 type IV collagen alpha 5 isoform 3 precursor [Homo
sapiens]
Length = 1688
Score = 94.4 bits (233), Expect = 8e-20
Identities = 44/82 (53%), Positives = 51/82 (62%), Gaps = 2/82 (2%)
Query: 28 GSPGIPGTPGSHGLPGRDGRDGLKGDPGPPGPMGPPGEMPCP--PGNDGLPGAPGIPGEC 85
GSPG+PG G+ G PG G G+ G PGPPGP+G PG P G+DGL G PG+PG
Sbjct: 878 GSPGLPGKAGASGFPGTKGEMGMMGPPGPPGPLGIPGRSGVPGLKGDDGLQGQPGLPGPT 937
Query: 86 GEKGEPGERGPPGLPAHLDEEL 107
GEKG GE G PG P +D L
Sbjct: 938 GEKGSKGEPGLPGPPGPMDPNL 959
Score = 89.0 bits (219), Expect = 3e-18
Identities = 46/84 (54%), Positives = 50/84 (59%), Gaps = 6/84 (7%)
Query: 23 KDVCVGSPGIPGTPGSHGLPGRDGRDGLKGDPGPPGPMGPPGEMPCPPGND------GLP 76
KD G PGIPG PG G PG GRDG KG G GP GPPG + PG G
Sbjct: 302 KDGENGQPGIPGLPGDPGYPGEPGRDGEKGQKGDTGPPGPPGLVIPRPGTGITIGEKGNI 361
Query: 77 GAPGIPGECGEKGEPGERGPPGLP 100
G PG+PGE GE+G PG +GPPGLP
Sbjct: 362 GLPGLPGEKGERGFPGIQGPPGLP 385
Score = 86.7 bits (213), Expect = 2e-17
Identities = 46/99 (46%), Positives = 51/99 (51%), Gaps = 25/99 (25%)
Query: 27 VGSPGIPGTPGSHGLPGRDGRDGLKGDPGPPGP---MGPPGE-----------------M 66
VG PG+PG PG+ G G+ G G G PGPPGP GPPG
Sbjct: 1100 VGDPGLPGLPGTPGAKGQPGLPGFPGTPGPPGPKGISGPPGNPGLPGEPGPVGGGGHPGQ 1159
Query: 67 PCPPGNDGLPGAPGIPGECGEKGEPGE-----RGPPGLP 100
P PPG G PG GIPG G+KGEPG+ GPPGLP
Sbjct: 1160 PGPPGEKGKPGQDGIPGPAGQKGEPGQPGFGNPGPPGLP 1198
Score = 84.3 bits (207), Expect = 9e-17
Identities = 41/72 (56%), Positives = 46/72 (63%), Gaps = 1/72 (1%)
Query: 28 GSPGIPGTPGSHGLPGRDGRDGLKGDPGPPGPMGPPG-EMPCPPGNDGLPGAPGIPGECG 86
G PGIPG PG+ G PGR G +G G PG PGP G PG +P PPG GLPG G G G
Sbjct: 716 GFPGIPGPPGAPGTPGRIGLEGPPGPPGFPGPKGEPGFALPGPPGPPGLPGFKGALGPKG 775
Query: 87 EKGEPGERGPPG 98
++G PG GPPG
Sbjct: 776 DRGFPGPPGPPG 787
Score = 82.4 bits (202), Expect = 3e-16
Identities = 43/81 (53%), Positives = 48/81 (59%), Gaps = 6/81 (7%)
Query: 28 GSPGIPGTPGSHGLPGRDGRDGLKGDPGPPGPMGPPGE--MPCPPGNDGLPGAPGIPGEC 85
G+PG PG PG GLPG G G G PGPPG MGPPG +P P GN GL G
Sbjct: 171 GNPGYPGPPGIQGLPGPTGIPGPIGPPGPPGLMGPPGPPGLPGPKGNMGL----NFQGPK 226
Query: 86 GEKGEPGERGPPGLPAHLDEE 106
GEKGE G +GPPG P + E+
Sbjct: 227 GEKGEQGLQGPPGPPGQISEQ 247
Score = 80.9 bits (198), Expect = 9e-16
Identities = 46/89 (51%), Positives = 50/89 (56%), Gaps = 13/89 (14%)
Query: 28 GSPGIPGTPGSHGLPGRDGRDGLKGDPGPPG--PMGPPGE-----MPCPPGNDGLPGAPG 80
G PG PG PG G PG G G KGDPGPPG GPPGE +P PG G PG+PG
Sbjct: 822 GPPGPPGIPGPIGQPGLHGIPGEKGDPGPPGLDVPGPPGERGSPGIPGAPGPIGPPGSPG 881
Query: 81 IPGEC------GEKGEPGERGPPGLPAHL 103
+PG+ G KGE G GPPG P L
Sbjct: 882 LPGKAGASGFPGTKGEMGMMGPPGPPGPL 910
Score = 80.1 bits (196), Expect = 2e-15
Identities = 43/84 (51%), Positives = 47/84 (55%), Gaps = 11/84 (13%)
Query: 28 GSPGIPGTPGSHGLPGRDGRDGLKGDPGPPGP---MGPPG--------EMPCPPGNDGLP 76
G PG+PG PG G PG G+ G G PGPPGP GPPG +P PG+DG P
Sbjct: 57 GHPGLPGFPGPEGPPGPRGQKGDDGIPGPPGPKGIRGPPGLPGFPGTPGLPGMPGHDGAP 116
Query: 77 GAPGIPGECGEKGEPGERGPPGLP 100
G GIPG G KGE G G PG P
Sbjct: 117 GPQGIPGCNGTKGERGFPGSPGFP 140
Score = 78.6 bits (192), Expect = 5e-15
Identities = 39/76 (51%), Positives = 43/76 (56%), Gaps = 1/76 (1%)
Query: 28 GSPGIPGTPGSHGLPGRDGRDGLKGDPGPPGPMGPPGEM-PCPPGNDGLPGAPGIPGECG 86
G G+PG PG+ GLPG G G G PG GP GPPG P G G PG G PG G
Sbjct: 1205 GDGGLPGIPGNPGLPGPKGEPGFHGFPGVQGPPGPPGSPGPALEGPKGNPGPQGPPGRPG 1264
Query: 87 EKGEPGERGPPGLPAH 102
+G PG GPPGLP +
Sbjct: 1265 FQGLPGPEGPPGLPGN 1280
Score = 78.2 bits (191), Expect = 6e-15
Identities = 40/75 (53%), Positives = 47/75 (62%), Gaps = 6/75 (8%)
Query: 28 GSPGIPGTPGSHGLPGRDGRDGLKGDPGPPGPMGPPGEMPCPPGNDGLPGAPGIPGECGE 87
G+PG+PG PG G PG G G G PGP G GPPG P G G PG+PG+PG+ G+
Sbjct: 1009 GNPGLPGQPGLIGPPGLKGTIGDMGFPGPQGVEGPPG----PSGVPGQPGSPGLPGQKGD 1064
Query: 88 KGEPG--ERGPPGLP 100
KG+PG G PGLP
Sbjct: 1065 KGDPGISSIGLPGLP 1079
Score = 77.8 bits (190), Expect = 8e-15
Identities = 41/81 (50%), Positives = 43/81 (53%), Gaps = 8/81 (9%)
Query: 28 GSPGIPGTPGSHGLPGRDGRDGLKGDPGPPGPMGPPGE--------MPCPPGNDGLPGAP 79
G PG GT G G PG G GL+G PGPPG G GE +P P GN G PG P
Sbjct: 120 GIPGCNGTKGERGFPGSPGFPGLQGPPGPPGIPGMKGEPGSIIMSSLPGPKGNPGYPGPP 179
Query: 80 GIPGECGEKGEPGERGPPGLP 100
GI G G G PG GPPG P
Sbjct: 180 GIQGLPGPTGIPGPIGPPGPP 200
Score = 77.4 bits (189), Expect = 1e-14
Identities = 41/95 (43%), Positives = 48/95 (50%), Gaps = 21/95 (22%)
Query: 28 GSPGIPGTPGSHGLPGRDGRDGLKGDPGPPGPMGPPGEMPCPPGNDGLPGAPGIPGECGE 87
G PG PG PG G+ G G GL G+PGP G G PG+ P PPG G PG GIPG G+
Sbjct: 1122 GFPGTPGPPGPKGISGPPGNPGLPGEPGPVGGGGHPGQ-PGPPGEKGKPGQDGIPGPAGQ 1180
Query: 88 KGEPGERG--------------------PPGLPAH 102
KGEPG+ G PG+P +
Sbjct: 1181 KGEPGQPGFGNPGPPGLPGLSGQKGDGGLPGIPGN 1215
Score = 77.0 bits (188), Expect = 1e-14
Identities = 48/94 (51%), Positives = 50/94 (53%), Gaps = 17/94 (18%)
Query: 23 KDVCVGSPGIPGTPGSHGLPGRDGRDGLKGD-----PGPPGPMGPPGEMPCPPGNDGLP- 76
+D VG PG PG PG GLPG G G G PGPPGP G PG +P PPG G P
Sbjct: 673 RDGDVGLPGDPGLPGQPGLPGIPGSKGEPGIPGIGLPGPPGPKGFPG-IPGPPGAPGTPG 731
Query: 77 -----GAPGIPGECGEKGE-----PGERGPPGLP 100
G PG PG G KGE PG GPPGLP
Sbjct: 732 RIGLEGPPGPPGFPGPKGEPGFALPGPPGPPGLP 765
Score = 76.6 bits (187), Expect = 2e-14
Identities = 43/91 (47%), Positives = 49/91 (53%), Gaps = 15/91 (16%)
Query: 28 GSPGIPGTPGSHGLPGRDGRDG-------LKGDPGPPGPMGPPG--EMPCPPGNDGLPGA 78
G PGIPG PG+ G PG G G +KGD G G G PG +P PG DGLPG
Sbjct: 527 GLPGIPGAPGAPGFPGSKGEPGDILTFPGMKGDKGELGSPGAPGLPGLPGTPGQDGLPGL 586
Query: 79 PGIPGECG------EKGEPGERGPPGLPAHL 103
PG GE G E+G PG G PGLP ++
Sbjct: 587 PGPKGEPGGITFKGERGPPGNPGLPGLPGNI 617
Score = 76.6 bits (187), Expect = 2e-14
Identities = 39/74 (52%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Query: 27 VGSPGIPGTPGSHGLPGRDGRDGLKGDPGPPGPMGPPGEMPCPPGNDGLPGAPGIPGECG 86
+G PG+PG G GLPG G G+KG G PG G PG P G GLPG PG PG G
Sbjct: 1073 IGLPGLPGPKGEPGLPGYPGNPGIKGSVGDPGLPGLPG-TPGAKGQPGLPGFPGTPGPPG 1131
Query: 87 EKGEPGERGPPGLP 100
KG G G PGLP
Sbjct: 1132 PKGISGPPGNPGLP 1145
Score = 75.9 bits (185), Expect = 3e-14
Identities = 43/87 (49%), Positives = 46/87 (52%), Gaps = 13/87 (14%)
Query: 26 CVGSPGIPGTPGSHGLPGRDGR------DGLKGDPGP------PGPMGPPGEMPCPPGND 73
C G+ G G PGS G PG G G+KG+PG PGP G PG P PPG
Sbjct: 124 CNGTKGERGFPGSPGFPGLQGPPGPPGIPGMKGEPGSIIMSSLPGPKGNPG-YPGPPGIQ 182
Query: 74 GLPGAPGIPGECGEKGEPGERGPPGLP 100
GLPG GIPG G G PG GPPG P
Sbjct: 183 GLPGPTGIPGPIGPPGPPGLMGPPGPP 209
Score = 75.5 bits (184), Expect = 4e-14
Identities = 39/84 (46%), Positives = 45/84 (53%), Gaps = 11/84 (13%)
Query: 28 GSPGIPGTPGSHGLPGRDGRDGLKGDPGPPGPMGPPGE-----------MPCPPGNDGLP 76
G+ GI G G+ G PG G GLKGD GPPG G PG +P PG G+
Sbjct: 1279 GNGGIKGEKGNPGQPGLPGLPGLKGDQGPPGLQGNPGRPGLNGMKGDPGLPGVPGFPGMK 1338
Query: 77 GAPGIPGECGEKGEPGERGPPGLP 100
G G+PG G +GEPG GPPG P
Sbjct: 1339 GPSGVPGSAGPEGEPGLIGPPGPP 1362
Score = 75.1 bits (183), Expect = 5e-14
Identities = 44/83 (53%), Positives = 48/83 (57%), Gaps = 10/83 (12%)
Query: 27 VGSPGIPGTPGSHGLPGRDGRDGL---KGDPGP---PGPMGPPG----EMPCPPGNDGLP 76
+G G G PG G PGR G DGL KGD GP PGPMGPPG + PPG G+P
Sbjct: 771 LGPKGDRGFPGPPGPPGRTGLDGLPGPKGDVGPNGQPGPMGPPGLPGIGVQGPPGPPGIP 830
Query: 77 GAPGIPGECGEKGEPGERGPPGL 99
G G PG G GE G+ GPPGL
Sbjct: 831 GPIGQPGLHGIPGEKGDPGPPGL 853
Score = 75.1 bits (183), Expect = 5e-14
Identities = 39/75 (52%), Positives = 43/75 (57%), Gaps = 3/75 (4%)
Query: 28 GSPGIPGTPGSHGLPGRDGRDGLKGDPGPPGPMGPPGEMPCPPGNDGLPGAPGIPGEC-- 85
G+PG PG PG G G G G+ G+PG PGP G PG PG G PG PG PG
Sbjct: 1190 GNPGPPGLPGLSGQKGDGGLPGIPGNPGLPGPKGEPG-FHGFPGVQGPPGPPGSPGPALE 1248
Query: 86 GEKGEPGERGPPGLP 100
G KG PG +GPPG P
Sbjct: 1249 GPKGNPGPQGPPGRP 1263
Score = 74.7 bits (182), Expect = 7e-14
Identities = 37/73 (50%), Positives = 42/73 (57%), Gaps = 1/73 (1%)
Query: 28 GSPGIPGTPGSHGLPGRDGRDGLKGDPGPPGPMGPPGEMPCPPGNDGLPGAPGIPGECGE 87
G PG+ G G GLPG G+ GL G PG PGP GP G P PG GL G PG+ G G+
Sbjct: 973 GIPGVSGPKGYQGLPGDPGQPGLSGQPGLPGPPGPKGN-PGLPGQPGLIGPPGLKGTIGD 1031
Query: 88 KGEPGERGPPGLP 100
G PG +G G P
Sbjct: 1032 MGFPGPQGVEGPP 1044
Score = 74.7 bits (182), Expect = 7e-14
Identities = 39/79 (49%), Positives = 45/79 (56%), Gaps = 6/79 (7%)
Query: 28 GSPGIPGTPGSHGLPGRDGRDGLKGDPGPPGPMGPPGE--MPCPPGND----GLPGAPGI 81
G PG+PG PG G+ G G G G G PG +GPPG +P P G G G PGI
Sbjct: 1324 GDPGLPGVPGFPGMKGPSGVPGSAGPEGEPGLIGPPGPPGLPGPSGQSIIIKGDAGPPGI 1383
Query: 82 PGECGEKGEPGERGPPGLP 100
PG+ G KG PG +GP GLP
Sbjct: 1384 PGQPGLKGLPGPQGPQGLP 1402
Score = 74.3 bits (181), Expect = 9e-14
Identities = 39/87 (44%), Positives = 47/87 (54%), Gaps = 14/87 (16%)
Query: 28 GSPGIPGTPGS--------HGLPGRDGRDGLKG------DPGPPGPMGPPGEMPCPPGND 73
G+PG+PG PG+ G PG G G++G PG PGP G PG+ PG
Sbjct: 606 GNPGLPGLPGNIGPMGPPGFGPPGPVGEKGIQGVAGNPGQPGIPGPKGDPGQTITQPGKP 665
Query: 74 GLPGAPGIPGECGEKGEPGERGPPGLP 100
GLPG PG G+ G G+PG G PGLP
Sbjct: 666 GLPGNPGRDGDVGLPGDPGLPGQPGLP 692
Score = 74.3 bits (181), Expect = 9e-14
Identities = 42/76 (55%), Positives = 45/76 (59%), Gaps = 9/76 (11%)
Query: 27 VGSPGIPGTPGSHGLPGRDGRDGLKGDPGPPGPMGPPGEMPCPPGNDGLPGAPGI--PGE 84
+ PG PG PG+ PGRDG GL GDPG PG G PG PG+ G PG PGI PG
Sbjct: 659 ITQPGKPGLPGN---PGRDGDVGLPGDPGLPGQPGLPG----IPGSKGEPGIPGIGLPGP 711
Query: 85 CGEKGEPGERGPPGLP 100
G KG PG GPPG P
Sbjct: 712 PGPKGFPGIPGPPGAP 727
Score = 74.3 bits (181), Expect = 9e-14
Identities = 40/80 (50%), Positives = 42/80 (52%), Gaps = 7/80 (8%)
Query: 28 GSPGIPGTPGSH---GLPGRDGRDGLKGDPGPPGPMGPPG----EMPCPPGNDGLPGAPG 80
G PG+PG PG GLPG G G G PG PG G PG +P PPG G PG PG
Sbjct: 663 GKPGLPGNPGRDGDVGLPGDPGLPGQPGLPGIPGSKGEPGIPGIGLPGPPGPKGFPGIPG 722
Query: 81 IPGECGEKGEPGERGPPGLP 100
PG G G G GPPG P
Sbjct: 723 PPGAPGTPGRIGLEGPPGPP 742
Score = 73.9 bits (180), Expect = 1e-13
Identities = 42/85 (49%), Positives = 45/85 (52%), Gaps = 12/85 (14%)
Query: 27 VGSPGIPGTPGSHGLPGRDGRDGLKGDPGPPGPMGPPGEMPCPPGNDGLPGAP------- 79
+GSPG PG PG G PG+DG GL G G PG + GE PPGN GLPG P
Sbjct: 563 LGSPGAPGLPGLPGTPGQDGLPGLPGPKGEPGGITFKGERG-PPGNPGLPGLPGNIGPMG 621
Query: 80 ----GIPGECGEKGEPGERGPPGLP 100
G PG GEKG G G PG P
Sbjct: 622 PPGFGPPGPVGEKGIQGVAGNPGQP 646
Score = 73.9 bits (180), Expect = 1e-13
Identities = 43/79 (54%), Positives = 46/79 (58%), Gaps = 8/79 (10%)
Query: 28 GSPGIPGTPGSHGLPGRDGRDGLKGDPGP---PGPMGPPGEMPCPPGNDGLPGAPGIPGE 84
G G PG PG G G DG G KGD GP PGPMGPPG +P G G PG PGIPG
Sbjct: 775 GDRGFPGPPGPPGRTGLDGLPGPKGDVGPNGQPGPMGPPG-LP-GIGVQGPPGPPGIPGP 832
Query: 85 CGE---KGEPGERGPPGLP 100
G+ G PGE+G PG P
Sbjct: 833 IGQPGLHGIPGEKGDPGPP 851
Score = 73.6 bits (179), Expect = 2e-13
Identities = 39/82 (47%), Positives = 43/82 (52%), Gaps = 9/82 (10%)
Query: 27 VGSPGIPGTPGSHGLPGRDGRD--------GLKGDPGPPGPMGPPGEMPCPPGNDGLPGA 78
+G PG+ G PG G PG G D G G PG PGP+GPPG P PG G G
Sbjct: 833 IGQPGLHGIPGEKGDPGPPGLDVPGPPGERGSPGIPGAPGPIGPPGS-PGLPGKAGASGF 891
Query: 79 PGIPGECGEKGEPGERGPPGLP 100
PG GE G G PG GP G+P
Sbjct: 892 PGTKGEMGMMGPPGPPGPLGIP 913
Score = 73.6 bits (179), Expect = 2e-13
Identities = 39/82 (47%), Positives = 44/82 (53%), Gaps = 9/82 (10%)
Query: 28 GSPGIPGTPGSHGLPGR---DGRDGLKGDPGPPGPMGPPGEM------PCPPGNDGLPGA 78
G PG PG G G+PG +G GL G PGPPG GP G+ PPG G PG
Sbjct: 1330 GVPGFPGMKGPSGVPGSAGPEGEPGLIGPPGPPGLPGPSGQSIIIKGDAGPPGIPGQPGL 1389
Query: 79 PGIPGECGEKGEPGERGPPGLP 100
G+PG G +G PG GPPG P
Sbjct: 1390 KGLPGPQGPQGLPGPTGPPGDP 1411
Score = 73.2 bits (178), Expect = 2e-13
Identities = 46/94 (48%), Positives = 49/94 (52%), Gaps = 16/94 (17%)
Query: 28 GSPGIPGT----------PGSHGLPGRDGRDGLKGDPGPPGPMGPPGEMPCPPGNDGLPG 77
G PGIPG PG GLPG GRDG G PG PG G PG +P PG+ G PG
Sbjct: 644 GQPGIPGPKGDPGQTITQPGKPGLPGNPGRDGDVGLPGDPGLPGQPG-LPGIPGSKGEPG 702
Query: 78 APGI--PGECGEKGEPGERGP---PGLPAHLDEE 106
PGI PG G KG PG GP PG P + E
Sbjct: 703 IPGIGLPGPPGPKGFPGIPGPPGAPGTPGRIGLE 736
Score = 73.2 bits (178), Expect = 2e-13
Identities = 38/75 (50%), Positives = 42/75 (56%), Gaps = 1/75 (1%)
Query: 28 GSPGIPGTPGSHGLPGRDGRDGLKGDPGPPGPMGPPGEMPCPPGNDGLPGAPGIPGECGE 87
G PG+PG PG+ G+ G G GL G PG PG G PG +P PG G PG GI G G
Sbjct: 1083 GEPGLPGYPGNPGIKGSVGDPGLPGLPGTPGAKGQPG-LPGFPGTPGPPGPKGISGPPGN 1141
Query: 88 KGEPGERGPPGLPAH 102
G PGE GP G H
Sbjct: 1142 PGLPGEPGPVGGGGH 1156
Score = 72.8 bits (177), Expect = 3e-13
Identities = 41/89 (46%), Positives = 44/89 (49%), Gaps = 16/89 (17%)
Query: 28 GSPGIPGTPGSHGLPGRDGRDGLKGDPGPPGPMGPPGE-----MPCPPG----------- 71
G PG G PG G+PG G DGL+G PG PGP G G +P PPG
Sbjct: 905 GPPGPLGIPGRSGVPGLKGDDGLQGQPGLPGPTGEKGSKGEPGLPGPPGPMDPNLLGSKG 964
Query: 72 NDGLPGAPGIPGECGEKGEPGERGPPGLP 100
G PG PGIPG G KG G G PG P
Sbjct: 965 EKGEPGLPGIPGVSGPKGYQGLPGDPGQP 993
Score = 72.0 bits (175), Expect = 4e-13
Identities = 45/98 (45%), Positives = 50/98 (51%), Gaps = 8/98 (8%)
Query: 6 LALNLILMAASGAVC---EVKDVCVGSPGIPGTPGSHGLPGRDGRDGLKGDPGPPGPMGP 62
LAL+L A A C C S GI G G G PG +G GL G PGP GP GP
Sbjct: 15 LALSLWGQPAEAAACYGCSPGSKCDCS-GIKGEKGERGFPGLEGHPGLPGFPGPEGPPGP 73
Query: 63 PGEMPCPPGNDGLPGAPGIPGECGEKGEPGERGPPGLP 100
G+ G+DG+PG PG G G G PG G PGLP
Sbjct: 74 RGQ----KGDDGIPGPPGPKGIRGPPGLPGFPGTPGLP 107
Score = 72.0 bits (175), Expect = 4e-13
Identities = 39/74 (52%), Positives = 43/74 (58%), Gaps = 4/74 (5%)
Query: 28 GSPGIPGTPGSHGLPGRDGRDGLKGDPGPPGPMGPPGEMPCPP---GNDGLPGAPGIPGE 84
G G PG PG G+ G G GL GDPG PG G PG +P PP GN GLPG PG+ G
Sbjct: 964 GEKGEPGLPGIPGVSGPKGYQGLPGDPGQPGLSGQPG-LPGPPGPKGNPGLPGQPGLIGP 1022
Query: 85 CGEKGEPGERGPPG 98
G KG G+ G PG
Sbjct: 1023 PGLKGTIGDMGFPG 1036
Score = 72.0 bits (175), Expect = 4e-13
Identities = 40/81 (49%), Positives = 42/81 (51%), Gaps = 11/81 (13%)
Query: 28 GSPGIPGTPGSHGLPGRDGRDGLKGDPGPPGPMGPPGEMPCP--------PGNDGLPGAP 79
G PGIPG PG GLPG G GL PGP GP G PG P G+ GLPG P
Sbjct: 1379 GPPGIPGQPGLKGLPGPQGPQGL---PGPTGPPGDPGRNGLPGFDGAGGRKGDPGLPGQP 1435
Query: 80 GIPGECGEKGEPGERGPPGLP 100
G G G G G +GPPG P
Sbjct: 1436 GTRGLDGPPGPDGLQGPPGPP 1456
Score = 71.6 bits (174), Expect = 6e-13
Identities = 40/84 (47%), Positives = 47/84 (55%), Gaps = 10/84 (11%)
Query: 24 DVCVGSPGIPGTPGSHGLPGRDGRDGLKGDPGPP-------GPMGPPGEMPCPPGNDGLP 76
++C PG PG PGS G G G G+KGD G G GPPG+ P PG G P
Sbjct: 449 EIC--EPGPPGPPGSPGDKGLQGEQGVKGDKGDTCFNCIGTGISGPPGQ-PGLPGLPGPP 505
Query: 77 GAPGIPGECGEKGEPGERGPPGLP 100
G+ G PG+ GEKG+ G GP GLP
Sbjct: 506 GSLGFPGQKGEKGQAGATGPKGLP 529
Score = 70.5 bits (171), Expect = 1e-12
Identities = 38/80 (47%), Positives = 44/80 (55%), Gaps = 8/80 (10%)
Query: 28 GSPGIPGTPGSHGLPGRDGRDGLKGDPGPPGPMGPPGEMPCPPGNDGLPGAPGIPGEC-- 85
G PG+PG PG G G G+ G KG G GP G PG +P PG G PG+ G PG+
Sbjct: 494 GQPGLPGLPGPPGSLGFPGQKGEKGQAGATGPKGLPG-IPGAPGAPGFPGSKGEPGDILT 552
Query: 86 -----GEKGEPGERGPPGLP 100
G+KGE G G PGLP
Sbjct: 553 FPGMKGDKGELGSPGAPGLP 572
Score = 70.5 bits (171), Expect = 1e-12
Identities = 42/98 (42%), Positives = 48/98 (48%), Gaps = 25/98 (25%)
Query: 27 VGSPGIPGTPGSHGLPGRDGRDGLKGD------PGPPGPMGPPGE-----MPCPP----- 70
+G G PG PG G+PGR G GLKGD PG PGP G G +P PP
Sbjct: 898 MGMMGPPGPPGPLGIPGRSGVPGLKGDDGLQGQPGLPGPTGEKGSKGEPGLPGPPGPMDP 957
Query: 71 ---------GNDGLPGAPGIPGECGEKGEPGERGPPGL 99
G GLPG PG+ G G +G PG+ G PGL
Sbjct: 958 NLLGSKGEKGEPGLPGIPGVSGPKGYQGLPGDPGQPGL 995
Score = 69.7 bits (169), Expect = 2e-12
Identities = 41/89 (46%), Positives = 45/89 (50%), Gaps = 17/89 (19%)
Query: 28 GSPGIPGTPGSHGLPGRDGRDGLKGDPGPPGPMGPPGE--MPCPPGNDGL------PGAP 79
G PG+PG PG+ GLPG G DG G G PG G GE P PG GL PG P
Sbjct: 93 GPPGLPGFPGTPGLPGMPGHDGAPGPQGIPGCNGTKGERGFPGSPGFPGLQGPPGPPGIP 152
Query: 80 GIPGECGE---------KGEPGERGPPGL 99
G+ GE G KG PG GPPG+
Sbjct: 153 GMKGEPGSIIMSSLPGPKGNPGYPGPPGI 181
Score = 68.6 bits (166), Expect = 5e-12
Identities = 52/161 (32%), Positives = 56/161 (34%), Gaps = 82/161 (50%)
Query: 28 GSPGIPGTPGSHGLPGRDGRDGLKGDPGPPGP---------------------------- 59
G PG+PG PG G PGRDG G KGD GPPGP
Sbjct: 310 GIPGLPGDPGYPGEPGRDGEKGQKGDTGPPGPPGLVIPRPGTGITIGEKGNIGLPGLPGE 369
Query: 60 ---------------MGPPG---------------------------EMPCPPGNDGLPG 77
GPPG +P PPG DG PG
Sbjct: 370 KGERGFPGIQGPPGLPGPPGAAVMGPPGPPGFPGERGQKGDEGPPGISIPGPPGLDGQPG 429
Query: 78 APGIPGECGEKG----------EPGERGPPGLPAHLDEELQ 108
APG+PG G G EPG GPPG P D+ LQ
Sbjct: 430 APGLPGPPGPAGPHIPPSDEICEPGPPGPPGSPG--DKGLQ 468
Score = 68.6 bits (166), Expect = 5e-12
Identities = 38/81 (46%), Positives = 43/81 (53%), Gaps = 9/81 (11%)
Query: 28 GSPGIPG--------TPGSHGLPGRDGRDGLKGDPGPPGPMGPPGEMPCPPGNDGLPGAP 79
G PG PG PG G PGR G GL G GPPG G G + GN G PG P
Sbjct: 1238 GPPGSPGPALEGPKGNPGPQGPPGRPGFQGLPGPEGPPGLPG-NGGIKGEKGNPGQPGLP 1296
Query: 80 GIPGECGEKGEPGERGPPGLP 100
G+PG G++G PG +G PG P
Sbjct: 1297 GLPGLKGDQGPPGLQGNPGRP 1317
Score = 68.6 bits (166), Expect = 5e-12
Identities = 37/76 (48%), Positives = 42/76 (55%), Gaps = 4/76 (5%)
Query: 28 GSPGIPGTPGSHGLPGRDGRDGLKGDPGPPGPMGPPGEMPCPPGNDGLPGA---PGIPGE 84
G PG G PG G PG G G+KG+ G PG G PG +P G+ G PG PG PG
Sbjct: 1261 GRPGFQGLPGPEGPPGLPGNGGIKGEKGNPGQPGLPG-LPGLKGDQGPPGLQGNPGRPGL 1319
Query: 85 CGEKGEPGERGPPGLP 100
G KG+PG G PG P
Sbjct: 1320 NGMKGDPGLPGVPGFP 1335
Score = 68.2 bits (165), Expect = 6e-12
Identities = 39/86 (45%), Positives = 45/86 (52%), Gaps = 14/86 (16%)
Query: 28 GSPGIPGTPGSHGLPGRDGRDGLKGDPGPPGPMGPPGEMPCPPGNDGLPGAP---GIPGE 84
G PGI PG GL G+ G GL G PGP GP PP + C PG G PG+P G+ GE
Sbjct: 412 GPPGI-SIPGPPGLDGQPGAPGLPGPPGPAGPHIPPSDEICEPGPPGPPGSPGDKGLQGE 470
Query: 85 CGEKGEPGE----------RGPPGLP 100
G KG+ G+ GPPG P
Sbjct: 471 QGVKGDKGDTCFNCIGTGISGPPGQP 496
Score = 68.2 bits (165), Expect = 6e-12
Identities = 46/112 (41%), Positives = 49/112 (43%), Gaps = 39/112 (34%)
Query: 28 GSPGIPGTPGSHGLPGRDGRDG---------LKGDPGPPGPMGPPGE------------- 65
G PG+PG PGS G PG+ G G L G PG PG G PG
Sbjct: 497 GLPGLPGPPGSLGFPGQKGEKGQAGATGPKGLPGIPGAPGAPGFPGSKGEPGDILTFPGM 556
Query: 66 --------MPCPPGNDGLPGAP---GIPGECGEKGEP------GERGPPGLP 100
P PG GLPG P G+PG G KGEP GERGPPG P
Sbjct: 557 KGDKGELGSPGAPGLPGLPGTPGQDGLPGLPGPKGEPGGITFKGERGPPGNP 608
Score = 67.4 bits (163), Expect = 1e-11
Identities = 42/85 (49%), Positives = 44/85 (51%), Gaps = 16/85 (18%)
Query: 28 GSPGIPGTPGSHGLPGRDGRDGLKGDPGP------PGPMGPPGEMPCPPGNDGL------ 75
G PG PG PG G PG G G+KG+PG PGP G PG P PPG GL
Sbjct: 132 GFPGSPGFPGLQGPPGPPGIPGMKGEPGSIIMSSLPGPKGNPG-YPGPPGIQGLPGPTGI 190
Query: 76 PGAPGIPGECGEKGEPGERGPPGLP 100
PG G PG G G P GPPGLP
Sbjct: 191 PGPIGPPGPPGLMGPP---GPPGLP 212
Score = 67.4 bits (163), Expect = 1e-11
Identities = 44/109 (40%), Positives = 52/109 (47%), Gaps = 36/109 (33%)
Query: 27 VGSPGIPGT---------------PGSHGLPGRDGRDGL---KGD-----------PGPP 57
+G PG+ GT PG G+PG+ G GL KGD PG P
Sbjct: 1020 IGPPGLKGTIGDMGFPGPQGVEGPPGPSGVPGQPGSPGLPGQKGDKGDPGISSIGLPGLP 1079
Query: 58 GPMGPPGEMPCPPGNDGL------PGAPGIPGECGEKGEPGERGPPGLP 100
GP G PG +P PGN G+ PG PG+PG G KG+PG G PG P
Sbjct: 1080 GPKGEPG-LPGYPGNPGIKGSVGDPGLPGLPGTPGAKGQPGLPGFPGTP 1127
Score = 66.6 bits (161), Expect = 2e-11
Identities = 43/106 (40%), Positives = 48/106 (45%), Gaps = 22/106 (20%)
Query: 16 SGAVCEVKDVCVGSPGIPGTPGSHGLPGRDGRDGLKGDP----------GPPGPMGPPGE 65
S +CE G PG PG+PG GL G G G KGD GPPG G PG
Sbjct: 447 SDEICEP-----GPPGPPGSPGDKGLQGEQGVKGDKGDTCFNCIGTGISGPPGQPGLPG- 500
Query: 66 MPCPPGNDGLPGAPGIPGECGEKGE------PGERGPPGLPAHLDE 105
+P PPG+ G PG G G+ G G PG G PG P E
Sbjct: 501 LPGPPGSLGFPGQKGEKGQAGATGPKGLPGIPGAPGAPGFPGSKGE 546
Score = 66.6 bits (161), Expect = 2e-11
Identities = 38/89 (42%), Positives = 45/89 (50%), Gaps = 20/89 (22%)
Query: 27 VGSPGIPGTPGSHG-------------LPGRDGRDGLKGDPGP---PGPMGPPGEMPCPP 70
+G PG PG PG G +PG+ G GL G GP PGP GPPG+ P
Sbjct: 1356 IGPPGPPGLPGPSGQSIIIKGDAGPPGIPGQPGLKGLPGPQGPQGLPGPTGPPGD----P 1411
Query: 71 GNDGLPGAPGIPGECGEKGEPGERGPPGL 99
G +GLPG G G G+ G PG+ G GL
Sbjct: 1412 GRNGLPGFDGAGGRKGDPGLPGQPGTRGL 1440
Score = 65.5 bits (158), Expect = 4e-11
Identities = 44/108 (40%), Positives = 50/108 (46%), Gaps = 36/108 (33%)
Query: 27 VGSPGIP---GTPGSHGLPGRDGRDGL--------KGDPGPPGPMGPPGEM--------- 66
+G PG P G PG GLPG G GL KG+ G GP GPPG++
Sbjct: 194 IGPPGPPGLMGPPGPPGLPGPKGNMGLNFQGPKGEKGEQGLQGPPGPPGQISEQKRPIDV 253
Query: 67 ---------------PCPPGNDGLPGAP-GIPGECGEKGEPGERGPPG 98
P PPG G PG P G GE GE+GEPG+RG PG
Sbjct: 254 EFQKGDQGLPGDRGPPGPPGIRGPPGPPGGEKGEKGEQGEPGKRGKPG 301
Score = 65.5 bits (158), Expect = 4e-11
Identities = 44/101 (43%), Positives = 50/101 (49%), Gaps = 26/101 (25%)
Query: 28 GSPGIPGTPGSHGLPGRDGRDG------LKGDPGPPGP------------MGPPGEMPCP 69
G PG+PGTPG GLPG G G KG+ GPPG MGPPG P
Sbjct: 570 GLPGLPGTPGQDGLPGLPGPKGEPGGITFKGERGPPGNPGLPGLPGNIGPMGPPGFGPPG 629
Query: 70 P----GNDGLPGAPGIPGECGEKGEPGER----GPPGLPAH 102
P G G+ G PG PG G KG+PG+ G PGLP +
Sbjct: 630 PVGEKGIQGVAGNPGQPGIPGPKGDPGQTITQPGKPGLPGN 670
Score = 61.2 bits (147), Expect = 8e-10
Identities = 37/88 (42%), Positives = 41/88 (46%), Gaps = 10/88 (11%)
Query: 28 GSPGIPGTPGSHGLP-------GRDGRDGLKGDPGPPG---PMGPPGEMPCPPGNDGLPG 77
G PG PG P G G G +G PGPPG P GPPG G G PG
Sbjct: 236 GPPGPPGQISEQKRPIDVEFQKGDQGLPGDRGPPGPPGIRGPPGPPGGEKGEKGEQGEPG 295
Query: 78 APGIPGECGEKGEPGERGPPGLPAHLDE 105
G PG+ GE G+PG G PG P + E
Sbjct: 296 KRGKPGKDGENGQPGIPGLPGDPGYPGE 323
Score = 60.8 bits (146), Expect = 1e-09
Identities = 43/128 (33%), Positives = 49/128 (38%), Gaps = 45/128 (35%)
Query: 27 VGSPGIPGTPGSHGL--------------PGRDGRDGLKGDPGPPGPMGP---PGEMPCP 69
+G PG PG PG G PG DG+ G G PGPPGP GP P + C
Sbjct: 393 MGPPGPPGFPGERGQKGDEGPPGISIPGPPGLDGQPGAPGLPGPPGPAGPHIPPSDEICE 452
Query: 70 PGNDGLPGAPGI----------------------------PGECGEKGEPGERGPPGLPA 101
PG G PG+PG PG+ G G PG G G P
Sbjct: 453 PGPPGPPGSPGDKGLQGEQGVKGDKGDTCFNCIGTGISGPPGQPGLPGLPGPPGSLGFPG 512
Query: 102 HLDEELQA 109
E+ QA
Sbjct: 513 QKGEKGQA 520
Score = 50.1 bits (118), Expect = 2e-06
Identities = 20/31 (64%), Positives = 23/31 (74%)
Query: 28 GSPGIPGTPGSHGLPGRDGRDGLKGDPGPPG 58
G PG+PG PG+ GL G G DGL+G PGPPG
Sbjct: 1427 GDPGLPGQPGTRGLDGPPGPDGLQGPPGPPG 1457
Score = 46.2 bits (108), Expect = 3e-05
Identities = 25/55 (45%), Positives = 26/55 (47%), Gaps = 18/55 (32%)
Query: 28 GSPGIPGTPGSHGLPGRDGRDGLKGDPGPPG------------------PMGPPG 64
G G PG PG +GLPG DG G KGDPG PG P GPPG
Sbjct: 1403 GPTGPPGDPGRNGLPGFDGAGGRKGDPGLPGQPGTRGLDGPPGPDGLQGPPGPPG 1457
>gi|100913220 alpha 1 type XVI collagen precursor [Homo sapiens]
Length = 1604
Score = 91.7 bits (226), Expect = 5e-19
Identities = 44/81 (54%), Positives = 51/81 (62%), Gaps = 10/81 (12%)
Query: 26 CVGSPGIPGTPGSHGLPGRDGRDGLKGDPGPPGPMGPPGEMPCPPGNDGLPGAPGIPGE- 84
CVGSPG+PG PG G G +G G++G PGPPGP+GPPG PG G PG PG+ GE
Sbjct: 1016 CVGSPGLPGPPGLPGQRGEEGPPGMRGSPGPPGPIGPPGF----PGAVGSPGLPGLQGER 1071
Query: 85 -----CGEKGEPGERGPPGLP 100
G+KGEPG G PG P
Sbjct: 1072 GLTGLTGDKGEPGPPGQPGYP 1092
Score = 84.7 bits (208), Expect = 7e-17
Identities = 45/90 (50%), Positives = 52/90 (57%), Gaps = 14/90 (15%)
Query: 28 GSPGIPGTPGSHGLPGRDGRDGLKGDPGPPGP---MGPPG--------EMPCPPGNDGLP 76
G PGI G G GL G+DG+ GL+GDPGP GP MGPPG +P P G+ G P
Sbjct: 1204 GPPGIQGPAGLDGLDGKDGKPGLRGDPGPAGPPGLMGPPGFKGKTGHPGLPGPKGDCGKP 1263
Query: 77 GAPGIPGECGEKGEPGERGP---PGLPAHL 103
G PG G G +GEPG GP PG P H+
Sbjct: 1264 GPPGSTGRPGAEGEPGAMGPQGRPGPPGHV 1293
Score = 79.7 bits (195), Expect = 2e-15
Identities = 42/80 (52%), Positives = 45/80 (56%), Gaps = 7/80 (8%)
Query: 27 VGSPGIPGTPGSHGLPGRDGRDGL------KGDPGPPGPMGPPGEMPCPPGNDGLPGAPG 80
+G PG PG GS GLPG G GL KG+PGPPG G PG PPG G+ G G
Sbjct: 1050 IGPPGFPGAVGSPGLPGLQGERGLTGLTGDKGEPGPPGQPGYPGATG-PPGLPGIKGERG 1108
Query: 81 IPGECGEKGEPGERGPPGLP 100
G GEKGEPG G GLP
Sbjct: 1109 YTGSAGEKGEPGPPGSEGLP 1128
Score = 78.6 bits (192), Expect = 5e-15
Identities = 41/76 (53%), Positives = 43/76 (56%), Gaps = 5/76 (6%)
Query: 28 GSPGIPGTPGSHGLPGRDGRDGLKGDPG---PPGPMGPPGEMPCP--PGNDGLPGAPGIP 82
GSPG PG PG G G DG DG G PG PGP GPPG M P G G PG PG
Sbjct: 1198 GSPGPPGPPGIQGPAGLDGLDGKDGKPGLRGDPGPAGPPGLMGPPGFKGKTGHPGLPGPK 1257
Query: 83 GECGEKGEPGERGPPG 98
G+CG+ G PG G PG
Sbjct: 1258 GDCGKPGPPGSTGRPG 1273
Score = 73.9 bits (180), Expect = 1e-13
Identities = 38/75 (50%), Positives = 43/75 (57%), Gaps = 4/75 (5%)
Query: 28 GSPGIPGTPGSHGLPGRDGRDGLKGDP---GPPGPMGPPG-EMPCPPGNDGLPGAPGIPG 83
G PGI G PG G PG G G +G P G GP+GPPG + PPG DG G G+ G
Sbjct: 800 GLPGIQGLPGPRGPPGPTGEKGAQGSPGVKGATGPVGPPGASVSGPPGRDGQQGQTGLRG 859
Query: 84 ECGEKGEPGERGPPG 98
GEKG GE+G PG
Sbjct: 860 TPGEKGPRGEKGEPG 874
Score = 73.2 bits (178), Expect = 2e-13
Identities = 38/76 (50%), Positives = 44/76 (57%), Gaps = 6/76 (7%)
Query: 27 VGSPGIPGTPGSHGLPGRDGRDGLKGDPGPP--GPMGPPGEMPCPPGNDGLPGAPGIPGE 84
VG PG PG PG G+ G G G++G+PGPP G GP GE PG GLPG G+PG
Sbjct: 755 VGRPGKPGQPGLPGVQGPPGLKGVQGEPGPPGRGVQGPQGE----PGAPGLPGIQGLPGP 810
Query: 85 CGEKGEPGERGPPGLP 100
G G GE+G G P
Sbjct: 811 RGPPGPTGEKGAQGSP 826
Score = 73.2 bits (178), Expect = 2e-13
Identities = 38/87 (43%), Positives = 43/87 (49%), Gaps = 14/87 (16%)
Query: 28 GSPGIPGTPGSHGLPGRDGRDGLKGDPGPPGPMGPPGE--------------MPCPPGND 73
G PG PG PG+ G G++G G +G GPPGP G PG MP PG
Sbjct: 1335 GHPGPPGEPGTDGAAGKEGPPGKQGFYGPPGPKGDPGAAGQKGQAGEKGRAGMPGGPGKS 1394
Query: 74 GLPGAPGIPGECGEKGEPGERGPPGLP 100
G G G PG GE+G PG GP G P
Sbjct: 1395 GSMGPVGPPGPAGERGHPGAPGPSGSP 1421
Score = 72.4 bits (176), Expect = 3e-13
Identities = 40/84 (47%), Positives = 44/84 (52%), Gaps = 11/84 (13%)
Query: 28 GSPGIPGTPGSHGLPGRDGRDGLKGDPGPPGPMGPPGEM--------PCPPGNDGLPG-- 77
G G PG PGS GLPG G G +G+ GP G G G+ P PPG G PG
Sbjct: 1114 GEKGEPGPPGSEGLPGPPGPAGPRGERGPQGNSGEKGDQGFQGQPGFPGPPGPPGFPGKV 1173
Query: 78 -APGIPGECGEKGEPGERGPPGLP 100
+PG PG EKG G RGP GLP
Sbjct: 1174 GSPGPPGPQAEKGSEGIRGPSGLP 1197
Score = 72.0 bits (175), Expect = 4e-13
Identities = 39/81 (48%), Positives = 43/81 (53%), Gaps = 9/81 (11%)
Query: 28 GSPGIPGTPGSHGLPGRDGRDGLKGDPGPPGPMGPPGEMPCPPGNDGLPGAPGIPGEC-- 85
G PG+PG G G PG G G G G PG MGP G P PPG+ G PG PG PG
Sbjct: 1249 GHPGLPGPKGDCGKPGPPGSTGRPGAEGEPGAMGPQGR-PGPPGHVGPPGPPGQPGPAGI 1307
Query: 86 ------GEKGEPGERGPPGLP 100
G++G GERG GLP
Sbjct: 1308 SAVGLKGDRGATGERGLAGLP 1328
Score = 71.2 bits (173), Expect = 7e-13
Identities = 43/99 (43%), Positives = 48/99 (48%), Gaps = 30/99 (30%)
Query: 28 GSPGIPGTPGSHGLP---GRDGRDGL------------KGD-----------PGPPGPMG 61
G+PG PG PGS GLP GR+GR GL KGD PGPPGP G
Sbjct: 1482 GAPGRPGAPGSPGLPGQIGREGRQGLPGVRGLPGTKGEKGDIGIGIAGENGLPGPPGPQG 1541
Query: 62 PPG----EMPCPPGNDGLPGAPGIPGECGEKGEPGERGP 96
PPG P G G+PG PG PG G+ G+ G P
Sbjct: 1542 PPGYGKMGATGPMGQQGIPGIPGPPGPMGQPGKAGHCNP 1580
Score = 70.9 bits (172), Expect = 1e-12
Identities = 41/96 (42%), Positives = 46/96 (47%), Gaps = 22/96 (22%)
Query: 27 VGSPGIPGTPGSHGLP-----------GRDGRDGLKGDPGPPGPMGPPGE--------MP 67
VG PG PG PG G+ G G GL G PGPPG GPPGE
Sbjct: 1293 VGPPGPPGQPGPAGISAVGLKGDRGATGERGLAGLPGQPGPPGHPGPPGEPGTDGAAGKE 1352
Query: 68 CPPGNDGL---PGAPGIPGECGEKGEPGERGPPGLP 100
PPG G PG G PG G+KG+ GE+G G+P
Sbjct: 1353 GPPGKQGFYGPPGPKGDPGAAGQKGQAGEKGRAGMP 1388
Score = 70.1 bits (170), Expect = 2e-12
Identities = 37/71 (52%), Positives = 38/71 (53%), Gaps = 4/71 (5%)
Query: 28 GSPGIPGTPGSHGLPGRDGRDGLKGDPGPPGPMGPPGEMPCPPGNDGLPGAPGIPGECGE 87
G PG PG PG G PG G DG G GPPG G G PPG G PGA G G+ GE
Sbjct: 1326 GLPGQPGPPGHPGPPGEPGTDGAAGKEGPPGKQGFYG----PPGPKGDPGAAGQKGQAGE 1381
Query: 88 KGEPGERGPPG 98
KG G G PG
Sbjct: 1382 KGRAGMPGGPG 1392
Score = 68.9 bits (167), Expect = 4e-12
Identities = 38/79 (48%), Positives = 41/79 (51%), Gaps = 10/79 (12%)
Query: 28 GSPGIPGTPGSHGLPGRDGRDGL------KGDPGPPGPMGPPGEMPCPPGNDGLPGAPGI 81
G PG PG G GLPG G G KG+PGPPG G PG PPG G G G
Sbjct: 1087 GQPGYPGATGPPGLPGIKGERGYTGSAGEKGEPGPPGSEGLPG----PPGPAGPRGERGP 1142
Query: 82 PGECGEKGEPGERGPPGLP 100
G GEKG+ G +G PG P
Sbjct: 1143 QGNSGEKGDQGFQGQPGFP 1161
Score = 68.9 bits (167), Expect = 4e-12
Identities = 40/80 (50%), Positives = 44/80 (55%), Gaps = 7/80 (8%)
Query: 28 GSPGIPGTPGSHGLPGRDGRDGL---KGDPGPPGPMGPPGE--MPCPPGND--GLPGAPG 80
G G PG PGS G PG +G G +G PGPPG +GPPG P P G GL G G
Sbjct: 1258 GDCGKPGPPGSTGRPGAEGEPGAMGPQGRPGPPGHVGPPGPPGQPGPAGISAVGLKGDRG 1317
Query: 81 IPGECGEKGEPGERGPPGLP 100
GE G G PG+ GPPG P
Sbjct: 1318 ATGERGLAGLPGQPGPPGHP 1337
Score = 68.6 bits (166), Expect = 5e-12
Identities = 38/73 (52%), Positives = 40/73 (54%), Gaps = 7/73 (9%)
Query: 27 VGSPGIPGTPGSHGLPGRDGRDGLKGDPGPPGPMGPPGEMPCPPGNDGLPGAPGIPGECG 86
VGSPG PG G G G GL G PGPPGP G G P G DGL G G P G
Sbjct: 1173 VGSPGPPGPQAEKGSEGIRGPSGLPGSPGPPGPPGIQG----PAGLDGLDGKDGKP---G 1225
Query: 87 EKGEPGERGPPGL 99
+G+PG GPPGL
Sbjct: 1226 LRGDPGPAGPPGL 1238
Score = 67.0 bits (162), Expect = 1e-11
Identities = 36/76 (47%), Positives = 42/76 (55%), Gaps = 4/76 (5%)
Query: 27 VGSPGIPGTPGSHGLPGRDGRDGLKGDPGPPGPMGPPGEMPC---PPGNDGLPGAPGIPG 83
+G G+PG+ G G G G G+KG PG PG G PGE+ C P G G PG G G
Sbjct: 386 LGPSGLPGSTGEKGQKGEKGDGGIKGVPGKPGRDGRPGEI-CVIGPKGQKGDPGFVGPEG 444
Query: 84 ECGEKGEPGERGPPGL 99
GE G PG GPPG+
Sbjct: 445 LAGEPGPPGLPGPPGI 460
Score = 67.0 bits (162), Expect = 1e-11
Identities = 40/105 (38%), Positives = 42/105 (40%), Gaps = 34/105 (32%)
Query: 28 GSPGIPGTPGSHGLPGRDGRDGLKGDPGPPGPMGPPGE-----MPCP------------- 69
G G G PG G PG GR GL G+PG GP GP GE CP
Sbjct: 682 GQKGDAGNPGDPGTPGTTGRPGLSGEPGVQGPAGPKGEKGDGCTACPSLQGTVTDMAGRP 741
Query: 70 ----------------PGNDGLPGAPGIPGECGEKGEPGERGPPG 98
PG G PG PG+ G G KG GE GPPG
Sbjct: 742 GQPGPKGEQGPEGVGRPGKPGQPGLPGVQGPPGLKGVQGEPGPPG 786
Score = 67.0 bits (162), Expect = 1e-11
Identities = 39/78 (50%), Positives = 42/78 (53%), Gaps = 8/78 (10%)
Query: 28 GSPGIPGTPGSHG-----LPGRDGRDGLKGDPGPPGPMGPPGEMPCPPGN--DGLPGAPG 80
G PG PG G G PG+ G+ GL G GPPG G GE P PPG G G PG
Sbjct: 739 GRPGQPGPKGEQGPEGVGRPGKPGQPGLPGVQGPPGLKGVQGE-PGPPGRGVQGPQGEPG 797
Query: 81 IPGECGEKGEPGERGPPG 98
PG G +G PG RGPPG
Sbjct: 798 APGLPGIQGLPGPRGPPG 815
Score = 65.1 bits (157), Expect = 5e-11
Identities = 34/76 (44%), Positives = 43/76 (56%), Gaps = 5/76 (6%)
Query: 28 GSPGIPGTPGSHGLPGRDGRDGLKGDPGPPGPMGPPGEMPCPPGNDGLPGAPGIPGECGE 87
G PG G GS G+PG++G G G PG G G P E+ CP +G G+PG+ G
Sbjct: 471 GPPGPKGDKGSSGIPGKEGPGGKPGKPGVKGEKGDPCEV-CPTLPEGFQNFVGLPGKPGP 529
Query: 88 KGEPGE----RGPPGL 99
KGEPG+ RG PG+
Sbjct: 530 KGEPGDPVPARGDPGI 545
Score = 63.9 bits (154), Expect = 1e-10
Identities = 38/97 (39%), Positives = 46/97 (47%), Gaps = 6/97 (6%)
Query: 24 DVCV----GSPGIPGTPGSHGLPGRDGRDGLKGDPGP--PGPMGPPGEMPCPPGNDGLPG 77
++CV G G PG G GL G G GL G PG PG G PG P P G+ G G
Sbjct: 424 EICVIGPKGQKGDPGFVGPEGLAGEPGPPGLPGPPGIGLPGTPGDPGGPPGPKGDKGSSG 483
Query: 78 APGIPGECGEKGEPGERGPPGLPAHLDEELQATLHDF 114
PG G G+ G+PG +G G P + L +F
Sbjct: 484 IPGKEGPGGKPGKPGVKGEKGDPCEVCPTLPEGFQNF 520
Score = 62.0 bits (149), Expect = 5e-10
Identities = 45/134 (33%), Positives = 57/134 (42%), Gaps = 25/134 (18%)
Query: 27 VGSPGIPGTPGSHGLPGRDG--RDGLKGDPG-PPGPMGPPGE--MPCPPGNDGLPGAPGI 81
VG G+ G PG GLPG G G GDPG PPGP G G +P G G PG PG+
Sbjct: 440 VGPEGLAGEPGPPGLPGPPGIGLPGTPGDPGGPPGPKGDKGSSGIPGKEGPGGKPGKPGV 499
Query: 82 PGECGEK------------------GEPGERGPPG--LPAHLDEELQATLHDFRHQILQT 121
GE G+ G+PG +G PG +PA D +Q + L
Sbjct: 500 KGEKGDPCEVCPTLPEGFQNFVGLPGKPGPKGEPGDPVPARGDPGIQGIKGEKGEPCLSC 559
Query: 122 RGALSLQGSIMTVG 135
+ Q + + G
Sbjct: 560 SSVVGAQHLVSSTG 573
Score = 61.6 bits (148), Expect = 6e-10
Identities = 40/101 (39%), Positives = 47/101 (46%), Gaps = 17/101 (16%)
Query: 12 LMAASGAVCEVKDVCVGSPGIPGTPGSHGLPGRDGRDGLKGDPGPPGPMGPPGEM----- 66
L++++GA +V G PG+PG G GL G G G G G PGP GP G
Sbjct: 568 LVSSTGASGDVGSPGFGLPGLPGRAGVPGLKGEKGNFGEAGPAGSPGPPGPVGPAGIKGA 627
Query: 67 ---PCPPG------NDGLPGAPGIPGECGEKGEPGERGPPG 98
PC P DG +PG GEKGEP GPPG
Sbjct: 628 KGEPCEPCPALSNLQDGDVRVVALPGPSGEKGEP---GPPG 665
Score = 61.2 bits (147), Expect = 8e-10
Identities = 37/102 (36%), Positives = 42/102 (41%), Gaps = 28/102 (27%)
Query: 27 VGSPG--IPGTPGSHGLPGRDGRDGLKGDPGPPGPMGPPGEMPCPPGND----------- 73
VG PG + G PG G G+ G G G+ GP G G PGE CP D
Sbjct: 835 VGPPGASVSGPPGRDGQQGQTGLRGTPGEKGPRGEKGEPGECSCPSQGDLIFSGMPGAPG 894
Query: 74 ---------------GLPGAPGIPGECGEKGEPGERGPPGLP 100
G+PG PG PG G +G PG G PG P
Sbjct: 895 LWMGSSWQPGPQGPPGIPGPPGPPGVPGLQGVPGNNGLPGQP 936
Score = 61.2 bits (147), Expect = 8e-10
Identities = 40/102 (39%), Positives = 48/102 (47%), Gaps = 7/102 (6%)
Query: 28 GSPGIPGTPGSHGLPGRDGRDGLKGDPGPPGPMGPPGEMPCPPG------NDGLPGAPGI 81
G PGIPG PG G+PG G G G PG PG G +P D + G
Sbjct: 907 GPPGIPGPPGPPGVPGLQGVPGNNGLPGQPGLTAELGSLPIEQHLLKSICGDCVQGQRAH 966
Query: 82 PGECGEKGEPGERGPPGLPAHLDEELQATLHDFRHQILQTRG 123
PG EKGE G++G PG+P LD Q L R + + RG
Sbjct: 967 PGYLVEKGEKGDQGIPGVPG-LDNCAQCFLSLERPRAEEARG 1007
Score = 60.1 bits (144), Expect = 2e-09
Identities = 35/86 (40%), Positives = 43/86 (50%), Gaps = 5/86 (5%)
Query: 28 GSPGIPGTPGSHGLPGRDGRDGLKGDPGPPGPMGPPGEMPCPPGNDGLPGAPGIPGECGE 87
G G PG PG GLPG+ G+ G +G G G G PG+ PG G G PG+ GE G
Sbjct: 656 GEKGEPGPPG-FGLPGKQGKAGERGLKGQKGDAGNPGD----PGTPGTTGRPGLSGEPGV 710
Query: 88 KGEPGERGPPGLPAHLDEELQATLHD 113
+G G +G G LQ T+ D
Sbjct: 711 QGPAGPKGEKGDGCTACPSLQGTVTD 736
Score = 58.9 bits (141), Expect = 4e-09
Identities = 34/78 (43%), Positives = 41/78 (52%), Gaps = 6/78 (7%)
Query: 28 GSPGIPGTPGSHGLPGRDGRDGLKGDPGPP-----GPMGPPGEMPCPPGNDGLPGAPGIP 82
G G+PG PGS G G G D ++ P P GP G GE G GLPG+ G
Sbjct: 340 GERGLPGPPGSKGEKGARGNDCVRISPDAPLQCAEGPKGEKGESGAL-GPSGLPGSTGEK 398
Query: 83 GECGEKGEPGERGPPGLP 100
G+ GEKG+ G +G PG P
Sbjct: 399 GQKGEKGDGGIKGVPGKP 416
Score = 57.4 bits (137), Expect = 1e-08
Identities = 40/116 (34%), Positives = 42/116 (36%), Gaps = 38/116 (32%)
Query: 23 KDVCVGSPGIPGTPGSHGLPGRDGRDGLKGDPGPPGPMGP-------------------- 62
K +G G PG G G PG G G G PG PG MG
Sbjct: 1393 KSGSMGPVGPPGPAGERGHPGAPGPSGSPGLPGVPGSMGDMVNYDEIKRFIRQEIIKMFD 1452
Query: 63 ------------PGEM------PCPPGNDGLPGAPGIPGECGEKGEPGERGPPGLP 100
P EM P PPG DG PG PG PG G G+ G G GLP
Sbjct: 1453 ERMAYYTSRMQFPMEMAAAPGRPGPPGKDGAPGRPGAPGSPGLPGQIGREGRQGLP 1508
Score = 57.0 bits (136), Expect = 1e-08
Identities = 47/158 (29%), Positives = 57/158 (36%), Gaps = 50/158 (31%)
Query: 28 GSPGIPGTP---GSHGLPGRDGRDGLKGDPGPPGPMGPPGEMPCPPGNDG---------- 74
G G+PG P GS G G G G +G PG PGP G PG +P PG+ G
Sbjct: 1383 GRAGMPGGPGKSGSMGPVGPPGPAGERGHPGAPGPSGSPG-LPGVPGSMGDMVNYDEIKR 1441
Query: 75 -----------------------------LPGAPGIPGECGEKGEPGERGPPGLPAHLDE 105
PG PG PG+ G G PG G PGLP +
Sbjct: 1442 FIRQEIIKMFDERMAYYTSRMQFPMEMAAAPGRPGPPGKDGAPGRPGAPGSPGLPGQIGR 1501
Query: 106 ELQATLHDFRHQILQTRGALSLQGSIMTVGEKVFSSNG 143
E R + RG +G +G + NG
Sbjct: 1502 E-------GRQGLPGVRGLPGTKGEKGDIGIGIAGENG 1532
Score = 55.5 bits (132), Expect = 4e-08
Identities = 43/135 (31%), Positives = 46/135 (34%), Gaps = 63/135 (46%)
Query: 28 GSPGIPGTPGSHGLPGRDGRDGLKGDP------------------GPPGPMGPPGEMPCP 69
GS GIPG G G PG+ G G KGDP G PGP G PG+ P P
Sbjct: 480 GSSGIPGKEGPGGKPGKPGVKGEKGDPCEVCPTLPEGFQNFVGLPGKPGPKGEPGD-PVP 538
Query: 70 PGND--------------------------------------------GLPGAPGIPGEC 85
D GLPG G+PG
Sbjct: 539 ARGDPGIQGIKGEKGEPCLSCSSVVGAQHLVSSTGASGDVGSPGFGLPGLPGRAGVPGLK 598
Query: 86 GEKGEPGERGPPGLP 100
GEKG GE GP G P
Sbjct: 599 GEKGNFGEAGPAGSP 613
Score = 49.3 bits (116), Expect = 3e-06
Identities = 38/129 (29%), Positives = 47/129 (36%), Gaps = 56/129 (43%)
Query: 28 GSPGIPGTPGSHGLPGRDG----------------------------------RDGLKGD 53
G PG+ G PG++GLPG+ G G KGD
Sbjct: 919 GVPGLQGVPGNNGLPGQPGLTAELGSLPIEQHLLKSICGDCVQGQRAHPGYLVEKGEKGD 978
Query: 54 PGPPGPMG-------------PPGEMPCPPGNDGLPGA---------PGIPGECGEKGEP 91
G PG G P E ++G PG PG+PG+ GE+G P
Sbjct: 979 QGIPGVPGLDNCAQCFLSLERPRAEEARGDNSEGDPGCVGSPGLPGPPGLPGQRGEEGPP 1038
Query: 92 GERGPPGLP 100
G RG PG P
Sbjct: 1039 GMRGSPGPP 1047
Score = 48.9 bits (115), Expect = 4e-06
Identities = 33/84 (39%), Positives = 40/84 (47%), Gaps = 6/84 (7%)
Query: 30 PGIPGTPGSHGLPGRDGRDGLKGDPGPPGPMGPPGEMPCPPGNDGLPGAPGIPGEC---- 85
P + G S+ G G KG+ G PGP G GE GND + +P P +C
Sbjct: 318 PCVHGARDSNVTLAPSGPKGGKGERGLPGPPGSKGEKGA-RGNDCVRISPDAPLQCAEGP 376
Query: 86 -GEKGEPGERGPPGLPAHLDEELQ 108
GEKGE G GP GLP E+ Q
Sbjct: 377 KGEKGESGALGPSGLPGSTGEKGQ 400
Score = 47.8 bits (112), Expect = 9e-06
Identities = 33/82 (40%), Positives = 36/82 (43%), Gaps = 17/82 (20%)
Query: 27 VGSPGIPGTPGSHGLPGRDGRDGLKGDPGPPGPMGPPGEMPCPPGNDGLPGAPGIPGECG 86
VGSPG G GLPGR G GLKG+ G G GP G +PG PG G
Sbjct: 578 VGSPGF----GLPGLPGRAGVPGLKGEKGNFGEAGPAG-------------SPGPPGPVG 620
Query: 87 EKGEPGERGPPGLPAHLDEELQ 108
G G +G P P LQ
Sbjct: 621 PAGIKGAKGEPCEPCPALSNLQ 642
>gi|40805823 collagen, type XXII, alpha 1 [Homo sapiens]
Length = 1626
Score = 88.6 bits (218), Expect = 5e-18
Identities = 46/90 (51%), Positives = 51/90 (56%), Gaps = 17/90 (18%)
Query: 28 GSPGIPGTPGSHGLPGRDGRDGLKGDPGPPGPMGPPGE-----MPCPP---------GND 73
G PG+PG PG G PG G G G PGPPGP GPPG+ P PP G D
Sbjct: 717 GPPGVPGPPGPGGSPGLPGEIGFPGKPGPPGPTGPPGKDGPNGPPGPPGTKGEPGERGED 776
Query: 74 GLPGAPGIPGECGEK---GEPGERGPPGLP 100
GLPG PG+ GE GE+ G PGE+G GLP
Sbjct: 777 GLPGKPGLRGEIGEQGLAGRPGEKGEAGLP 806
Score = 83.2 bits (204), Expect = 2e-16
Identities = 47/85 (55%), Positives = 51/85 (60%), Gaps = 7/85 (8%)
Query: 28 GSPGIPGTPGSHGLPGRDGRDGLKGD---PGPPGPMGPPGEMPCPPGNDGLPGA---PGI 81
G PGI G GS G G DG G KGD PG PG MGPPG P PPG DG+ GA PGI
Sbjct: 1159 GPPGIAGPQGSQGERGADGEVGQKGDQGHPGVPGFMGPPGN-PGPPGADGIAGAAGPPGI 1217
Query: 82 PGECGEKGEPGERGPPGLPAHLDEE 106
G G++G PG +GP GLP EE
Sbjct: 1218 QGSPGKEGPPGPQGPSGLPGIPGEE 1242
Score = 83.2 bits (204), Expect = 2e-16
Identities = 41/75 (54%), Positives = 46/75 (61%), Gaps = 7/75 (9%)
Query: 28 GSPGIPGTPGSHGLPGRDGRDGLKGDPGPP---GPMGPPGEMPCPPGNDGLPGAPGIPGE 84
GSPG PG PG G PG+ G G G PG P GP GPPGE PG G+PG G+PG+
Sbjct: 1330 GSPGSPGEPGPSGTPGQKGSKGENGSPGLPGFLGPRGPPGE----PGEKGVPGKEGVPGK 1385
Query: 85 CGEKGEPGERGPPGL 99
GE G GERG PG+
Sbjct: 1386 PGEPGFKGERGDPGI 1400
Score = 82.0 bits (201), Expect = 4e-16
Identities = 41/79 (51%), Positives = 48/79 (60%), Gaps = 4/79 (5%)
Query: 28 GSPGIPGTPGSHGLPGRDGRDGLKGDPGPPGPMGPPGEMPCPPGNDGLPGAPGIPGEC-- 85
G+PG G G+ GLPG++G G GD GP GP GP G PPG +G PG+PG PG
Sbjct: 1285 GAPGPRGESGAMGLPGQEGLPGKDGDTGPTGPQGPQGPRG-PPGKNGSPGSPGEPGPSGT 1343
Query: 86 -GEKGEPGERGPPGLPAHL 103
G+KG GE G PGLP L
Sbjct: 1344 PGQKGSKGENGSPGLPGFL 1362
Score = 81.3 bits (199), Expect = 7e-16
Identities = 40/78 (51%), Positives = 46/78 (58%), Gaps = 1/78 (1%)
Query: 28 GSPGIPGTPGSHGLPGRDGRDGLKGDPGPPGPMGPPGEMPCPPGNDGLPGAPGIPGECGE 87
G PG+PG G G PG G DG+ G GPPG G PG+ PPG G G PGIPGE G+
Sbjct: 1186 GHPGVPGFMGPPGNPGPPGADGIAGAAGPPGIQGSPGK-EGPPGPQGPSGLPGIPGEEGK 1244
Query: 88 KGEPGERGPPGLPAHLDE 105
+G G+ GPPG P E
Sbjct: 1245 EGRDGKPGPPGEPGKAGE 1262
Score = 80.1 bits (196), Expect = 2e-15
Identities = 42/87 (48%), Positives = 48/87 (55%), Gaps = 11/87 (12%)
Query: 27 VGSPGIPGTPGSHGLPGRDGRDGLKGDP---GPPGPMGPPGEMPCP-----PGNDGLPGA 78
+G PG PG PG+ G+ G G G++G P GPPGP GP G P G DG PG
Sbjct: 1194 MGPPGNPGPPGADGIAGAAGPPGIQGSPGKEGPPGPQGPSGLPGIPGEEGKEGRDGKPGP 1253
Query: 79 PGIPGECGEKGEP---GERGPPGLPAH 102
PG PG+ GE G P G RGPPG H
Sbjct: 1254 PGEPGKAGEPGLPGPEGARGPPGFKGH 1280
Score = 77.4 bits (189), Expect = 1e-14
Identities = 37/75 (49%), Positives = 43/75 (57%), Gaps = 2/75 (2%)
Query: 28 GSPGIPGTPGSHGLPGRDGRDGLKGDPGPPGPMGPPGE--MPCPPGNDGLPGAPGIPGEC 85
G G+PG PG G G G G+KGD GPPG G PG+ +P G+ GL G G+PGE
Sbjct: 1378 GKEGVPGKPGEPGFKGERGDPGIKGDKGPPGGKGQPGDPGIPGHKGHTGLMGPQGLPGEN 1437
Query: 86 GEKGEPGERGPPGLP 100
G G PG G PG P
Sbjct: 1438 GPVGPPGPPGQPGFP 1452
Score = 75.9 bits (185), Expect = 3e-14
Identities = 48/111 (43%), Positives = 49/111 (44%), Gaps = 35/111 (31%)
Query: 28 GSPGIPGTPGSHGLPGR------------------------DGRDGLKGDPGPP-----G 58
G PG PG PG GLPGR G G KGDPG P G
Sbjct: 1497 GRPGPPGPPGKDGLPGRAGPMGEPGRPGQGGLEGPSGPIGPKGERGAKGDPGAPGVGLRG 1556
Query: 59 PMGPPGEMPCPPG-----NDGLPGAPGIPGECGEKGEPGERGPPGLPAHLD 104
MGPPG +P PG DGLPG PG GE G G PG GPPG P D
Sbjct: 1557 EMGPPG-IPGQPGEPGYAKDGLPGIPGPQGETGPAGHPGLPGPPGPPGQCD 1606
Score = 75.1 bits (183), Expect = 5e-14
Identities = 40/77 (51%), Positives = 45/77 (58%), Gaps = 4/77 (5%)
Query: 27 VGSPGIPGTPGSHGL---PGRDGRDGLKGDPGPPGPMGPPGEMPCPPGNDGLPGAPGIPG 83
+G PG PG GS G+ PG G GL G+ G GP GPPG +P PPG G PG G G
Sbjct: 535 LGLPGPPGRDGSKGMRGEPGELGEPGLPGEVGMRGPQGPPG-LPGPPGRVGAPGLQGERG 593
Query: 84 ECGEKGEPGERGPPGLP 100
E G +GE GERG G P
Sbjct: 594 EKGTRGEKGERGLDGFP 610
Score = 75.1 bits (183), Expect = 5e-14
Identities = 40/82 (48%), Positives = 44/82 (53%), Gaps = 2/82 (2%)
Query: 21 EVKDVCVGSPGIPGTPGSHGLPGRDGRDGLKGDPGPPGPMGPPGEMPCP--PGNDGLPGA 78
E +D G G+ G G G PG G GL+G PGPPG GPPG P PG G PG
Sbjct: 683 EGRDGPPGLQGLRGKKGDMGPPGIPGLLGLQGPPGPPGVPGPPGPGGSPGLPGEIGFPGK 742
Query: 79 PGIPGECGEKGEPGERGPPGLP 100
PG PG G G+ G GPPG P
Sbjct: 743 PGPPGPTGPPGKDGPNGPPGPP 764
Score = 75.1 bits (183), Expect = 5e-14
Identities = 37/71 (52%), Positives = 39/71 (54%), Gaps = 4/71 (5%)
Query: 28 GSPGIPGTPGSHGLPGRDGRDGLKGDPGPPGPMGPPGEMPCPPGNDGLPGAPGIPGECGE 87
G PG G G+HG PG G G G G PGP GPPG + P GL G PG GE GE
Sbjct: 898 GPPGAKGQEGAHGAPGAAGNPGAPGHVGAPGPSGPPGSVGAP----GLRGTPGKDGERGE 953
Query: 88 KGEPGERGPPG 98
KG GE G PG
Sbjct: 954 KGAAGEEGSPG 964
Score = 75.1 bits (183), Expect = 5e-14
Identities = 45/105 (42%), Positives = 49/105 (46%), Gaps = 32/105 (30%)
Query: 28 GSPGIPGTPGSHGLPGRDG------RDGLKGDPGPPGPMGPPGEM--------------- 66
G PG G+PGS GLPG G RDG G+PG GP G PG
Sbjct: 1054 GPPGDKGSPGSRGLPGFPGPQGPAGRDGAPGNPGERGPPGKPGLSSLLSPGDINLLAKDV 1113
Query: 67 --PCPPGNDGLPGAPGI---------PGECGEKGEPGERGPPGLP 100
CPPG GLPG PG PG G +G+ GE GPPGLP
Sbjct: 1114 CNDCPPGPPGLPGLPGFKGDKGVPGKPGREGTEGKKGEAGPPGLP 1158
Score = 74.7 bits (182), Expect = 7e-14
Identities = 41/79 (51%), Positives = 46/79 (58%), Gaps = 11/79 (13%)
Query: 28 GSPGIPGTPGSHGLPGRDGRDGLKG---DPGPPGPMGPPGEMPCPPGNDGLPGAPGIPGE 84
G PG G PG G PG+DG G KG + G PGP+GP G+ PG GLPG PG
Sbjct: 931 GPPGSVGAPGLRGTPGKDGERGEKGAAGEEGSPGPVGPRGD----PGAPGLPGPPG---- 982
Query: 85 CGEKGEPGERGPPGLPAHL 103
G+ GEPG RG PGLP L
Sbjct: 983 KGKDGEPGLRGSPGLPGPL 1001
Score = 73.9 bits (180), Expect = 1e-13
Identities = 38/79 (48%), Positives = 42/79 (53%), Gaps = 10/79 (12%)
Query: 28 GSPGIPGTPGSHGLPGRDGRDGLKGDPGPPGPMGPPGEMPCPPGNDGLPGAPGIPGE--- 84
G PG G PG G+PG+ G G KG+ G PG G G PPG G PG PGIPG
Sbjct: 1369 GEPGEKGVPGKEGVPGKPGEPGFKGERGDPGIKGDKG----PPGGKGQPGDPGIPGHKGH 1424
Query: 85 ---CGEKGEPGERGPPGLP 100
G +G PGE GP G P
Sbjct: 1425 TGLMGPQGLPGENGPVGPP 1443
Score = 70.9 bits (172), Expect = 1e-12
Identities = 42/85 (49%), Positives = 46/85 (54%), Gaps = 13/85 (15%)
Query: 28 GSPGIPGTPGSHGLPGRDGRDGL------KGDPGPPGP------MGPPGEMPCPPGNDGL 75
G+PG PG G G GRDG GL KGD GPPG GPPG P PG G
Sbjct: 669 GAPGPPGARGPIGPEGRDGPPGLQGLRGKKGDMGPPGIPGLLGLQGPPGP-PGVPGPPGP 727
Query: 76 PGAPGIPGECGEKGEPGERGPPGLP 100
G+PG+PGE G G+PG GP G P
Sbjct: 728 GGSPGLPGEIGFPGKPGPPGPTGPP 752
Score = 69.7 bits (169), Expect = 2e-12
Identities = 45/103 (43%), Positives = 53/103 (51%), Gaps = 21/103 (20%)
Query: 20 CEVKDVCV----GSPGIPGTPGSHGLPGRDGRDGLKGDPGPPGPMGPPGEMPCPPGNDGL 75
C + CV G+PGIPG+PGS G PG G GPPGP GPPG+ P G+ GL
Sbjct: 1016 CALGGQCVKGDRGAPGIPGSPGSRGDPGI-------GVAGPPGPSGPPGDKGSP-GSRGL 1067
Query: 76 PGAPG---------IPGECGEKGEPGERGPPGLPAHLDEELQA 109
PG PG PG GE+G PG+ G L + D L A
Sbjct: 1068 PGFPGPQGPAGRDGAPGNPGERGPPGKPGLSSLLSPGDINLLA 1110
Score = 69.3 bits (168), Expect = 3e-12
Identities = 37/80 (46%), Positives = 41/80 (51%), Gaps = 10/80 (12%)
Query: 28 GSPGIPGTPGSHGLPGRDGRDGLKGDPG---------PPGPMGPPGEMPCPPGNDGLPGA 78
G PG PG PG G PG G +G +G PG PGP G G M PG +GLPG
Sbjct: 1249 GKPGPPGEPGKAGEPGLPGPEGARGPPGFKGHTGDSGAPGPRGESGAMGL-PGQEGLPGK 1307
Query: 79 PGIPGECGEKGEPGERGPPG 98
G G G +G G RGPPG
Sbjct: 1308 DGDTGPTGPQGPQGPRGPPG 1327
Score = 68.9 bits (167), Expect = 4e-12
Identities = 38/78 (48%), Positives = 42/78 (53%), Gaps = 1/78 (1%)
Query: 23 KDVCVGSPGIPGTPGSHGLPGRDGRDGLKGDPGPPGPMGPPGEMPCPPGNDGLPGAPGIP 82
+D G PG+ G G GL GR G G G PG PG G GE G G G PG+
Sbjct: 775 EDGLPGKPGLRGEIGEQGLAGRPGEKGEAGLPGAPGFPGVRGEKG-DQGEKGELGLPGLK 833
Query: 83 GECGEKGEPGERGPPGLP 100
G+ GEKGE G GPPGLP
Sbjct: 834 GDRGEKGEAGPAGPPGLP 851
Score = 68.6 bits (166), Expect = 5e-12
Identities = 35/75 (46%), Positives = 41/75 (54%), Gaps = 2/75 (2%)
Query: 28 GSPGIPGTPGSHGLPGRDGRDGLKGDPGPPGPMGPPGE--MPCPPGNDGLPGAPGIPGEC 85
G PG G G G+PG +G++G G PGPPG G GE +P P G G PG G G+
Sbjct: 1225 GPPGPQGPSGLPGIPGEEGKEGRDGKPGPPGEPGKAGEPGLPGPEGARGPPGFKGHTGDS 1284
Query: 86 GEKGEPGERGPPGLP 100
G G GE G GLP
Sbjct: 1285 GAPGPRGESGAMGLP 1299
Score = 67.8 bits (164), Expect = 8e-12
Identities = 39/108 (36%), Positives = 49/108 (45%), Gaps = 29/108 (26%)
Query: 28 GSPGIPGTPGSHGLPGRDGRDGLKGDPGPPGPMGPPGEMPCP-----------------P 70
GS G+ G PG G PG G G++G GPPG GPPG + P
Sbjct: 545 GSKGMRGEPGELGEPGLPGEVGMRGPQGPPGLPGPPGRVGAPGLQGERGEKGTRGEKGER 604
Query: 71 GNDGLPGAP------------GIPGECGEKGEPGERGPPGLPAHLDEE 106
G DG PG P G+ G GEKG+ G GPPG+P + ++
Sbjct: 605 GLDGFPGKPGDTGQQGRPGPSGVAGPQGEKGDVGPAGPPGVPGSVVQQ 652
Score = 67.8 bits (164), Expect = 8e-12
Identities = 34/74 (45%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Query: 27 VGSPGIPGTPGSHGLPGRDGRDGLKGDPGPPGPMGPPGEMPCPPGNDGLPGAPGIPGECG 86
+G G G PG+ G G G G G+PG PG +G PG PPG+ G PG G PG+ G
Sbjct: 891 LGPQGPTGPPGAKGQEGAHGAPGAAGNPGAPGHVGAPGPSG-PPGSVGAPGLRGTPGKDG 949
Query: 87 EKGEPGERGPPGLP 100
E+GE G G G P
Sbjct: 950 ERGEKGAAGEEGSP 963
Score = 67.4 bits (163), Expect = 1e-11
Identities = 35/71 (49%), Positives = 36/71 (50%), Gaps = 1/71 (1%)
Query: 28 GSPGIPGTPGSHGLPGRDGRDGLKGDPGPPGPMGPPGEMPCPPGNDGLPGAPGIPGECGE 87
G G G G GLPG G G G+ GP GP GPPG G G PGA G PG G
Sbjct: 865 GEQGPKGEKGDPGLPGEPGLQGRPGELGPQGPTGPPGAKG-QEGAHGAPGAAGNPGAPGH 923
Query: 88 KGEPGERGPPG 98
G PG GPPG
Sbjct: 924 VGAPGPSGPPG 934
Score = 67.4 bits (163), Expect = 1e-11
Identities = 39/83 (46%), Positives = 44/83 (53%), Gaps = 13/83 (15%)
Query: 28 GSPGIPGTPGSHGLPGRDGRDGLKGDPGPPGPMGPP-------GEMPCPPGND---GLPG 77
G PG PG PG G G+DG GL+G PG PGP+G G C G G G
Sbjct: 970 GDPGAPGLPGPPG-KGKDGEPGLRGSPGLPGPLGTKAACGKVRGSENCALGGQCVKGDRG 1028
Query: 78 APGIPGECGEKGEP--GERGPPG 98
APGIPG G +G+P G GPPG
Sbjct: 1029 APGIPGSPGSRGDPGIGVAGPPG 1051
Score = 67.0 bits (162), Expect = 1e-11
Identities = 39/89 (43%), Positives = 43/89 (48%), Gaps = 18/89 (20%)
Query: 28 GSPGIPGTPGSHG---------LPGRDGRDGLKGDPGPPGPMGPPG---------EMPCP 69
G+PG PG G G LPG G G KG+ GP GP G PG MP
Sbjct: 807 GAPGFPGVRGEKGDQGEKGELGLPGLKGDRGEKGEAGPAGPPGLPGTTSLFTPHPRMPGE 866
Query: 70 PGNDGLPGAPGIPGECGEKGEPGERGPPG 98
G G G PG+PGE G +G PGE GP G
Sbjct: 867 QGPKGEKGDPGLPGEPGLQGRPGELGPQG 895
Score = 65.9 bits (159), Expect = 3e-11
Identities = 37/85 (43%), Positives = 42/85 (49%), Gaps = 9/85 (10%)
Query: 28 GSPGIPGTPGSHGLPGRDGRDGLKGDPGPPGPMGPPGEMPCPP---------GNDGLPGA 78
G G G G GLPG G G G G PGP G G++ P G+ GLPG
Sbjct: 481 GEKGEMGVAGPMGLPGPKGDIGAIGPVGAPGPKGEKGDVGIGPFGQGEKGEKGSLGLPGP 540
Query: 79 PGIPGECGEKGEPGERGPPGLPAHL 103
PG G G +GEPGE G PGLP +
Sbjct: 541 PGRDGSKGMRGEPGELGEPGLPGEV 565
Score = 65.5 bits (158), Expect = 4e-11
Identities = 34/69 (49%), Positives = 35/69 (50%), Gaps = 4/69 (5%)
Query: 30 PGIPGTPGSHGLPGRDGRDGLKGDPGPPGPMGPPGEMPCPPGNDGLPGAPGIPGECGEKG 89
PG G G G PG G GL+G PG GP GP G PPG G GA G PG G G
Sbjct: 864 PGEQGPKGEKGDPGLPGEPGLQGRPGELGPQGPTG----PPGAKGQEGAHGAPGAAGNPG 919
Query: 90 EPGERGPPG 98
PG G PG
Sbjct: 920 APGHVGAPG 928
Score = 65.1 bits (157), Expect = 5e-11
Identities = 36/90 (40%), Positives = 43/90 (47%), Gaps = 16/90 (17%)
Query: 24 DVCVGSPGIPGTPGS---------------HGLPGRDGRDGLKGDPGPPGPMGPPGEMPC 68
D G+ G PG GS G+PG +G++G G PGPPG G GE P
Sbjct: 1206 DGIAGAAGPPGIQGSPGKEGPPGPQGPSGLPGIPGEEGKEGRDGKPGPPGEPGKAGE-PG 1264
Query: 69 PPGNDGLPGAPGIPGECGEKGEPGERGPPG 98
PG +G G PG G G+ G PG RG G
Sbjct: 1265 LPGPEGARGPPGFKGHTGDSGAPGPRGESG 1294
Score = 65.1 bits (157), Expect = 5e-11
Identities = 35/75 (46%), Positives = 38/75 (50%), Gaps = 2/75 (2%)
Query: 28 GSPGIPGTPGSHGLPGRDGRDGLKGDPGPPGPMGPPGEMPC--PPGNDGLPGAPGIPGEC 85
G G+PG PG G GRDG+ G G+PG G G PG PPG G G G PG
Sbjct: 1231 GPSGLPGIPGEEGKEGRDGKPGPPGEPGKAGEPGLPGPEGARGPPGFKGHTGDSGAPGPR 1290
Query: 86 GEKGEPGERGPPGLP 100
GE G G G GLP
Sbjct: 1291 GESGAMGLPGQEGLP 1305
Score = 64.3 bits (155), Expect = 9e-11
Identities = 36/74 (48%), Positives = 37/74 (50%), Gaps = 3/74 (4%)
Query: 28 GSPGIPGTPGSHGLPGRDG---RDGLKGDPGPPGPMGPPGEMPCPPGNDGLPGAPGIPGE 84
G PG PG G G PG G G KGD GP GP G PG + G G GAPG G
Sbjct: 608 GFPGKPGDTGQQGRPGPSGVAGPQGEKGDVGPAGPPGVPGSVVQQEGLKGEQGAPGPRGH 667
Query: 85 CGEKGEPGERGPPG 98
G G PG RGP G
Sbjct: 668 QGAPGPPGARGPIG 681
Score = 62.8 bits (151), Expect = 3e-10
Identities = 37/82 (45%), Positives = 42/82 (51%), Gaps = 9/82 (10%)
Query: 28 GSPGIPGTPGSHGLPGRDGRDGLKGDPGPPGPMGPPGEM--PCPPGNDGLPGA------- 78
G G+PG PG G+ G G G KG+ G PG G GE P G GLPG
Sbjct: 801 GEAGLPGAPGFPGVRGEKGDQGEKGELGLPGLKGDRGEKGEAGPAGPPGLPGTTSLFTPH 860
Query: 79 PGIPGECGEKGEPGERGPPGLP 100
P +PGE G KGE G+ G PG P
Sbjct: 861 PRMPGEQGPKGEKGDPGLPGEP 882
Score = 62.4 bits (150), Expect = 3e-10
Identities = 36/83 (43%), Positives = 41/83 (49%), Gaps = 11/83 (13%)
Query: 28 GSPGIPGTPGSHG----LPGRDGRDGLKGDPGPPGP---MGPPGEMPCPPGNDGLPGAPG 80
G PG+PGT +PG G G KGDPG PG G PGE+ G G G PG
Sbjct: 846 GPPGLPGTTSLFTPHPRMPGEQGPKGEKGDPGLPGEPGLQGRPGEL----GPQGPTGPPG 901
Query: 81 IPGECGEKGEPGERGPPGLPAHL 103
G+ G G PG G PG P H+
Sbjct: 902 AKGQEGAHGAPGAAGNPGAPGHV 924
Score = 62.0 bits (149), Expect = 5e-10
Identities = 40/86 (46%), Positives = 44/86 (51%), Gaps = 12/86 (13%)
Query: 27 VGSPGIPGTPGSHGLPGRDGRDGLKGDPG-PPGPMGPPGE-----MPCPPGNDGLPGAPG 80
+G PG G G+ G G G G KGD G P G GE +P PPG DG G G
Sbjct: 492 MGLPGPKGDIGAIGPVGAPGPKGEKGDVGIGPFGQGEKGEKGSLGLPGPPGRDGSKGMRG 551
Query: 81 IPGECGEKGEPGE------RGPPGLP 100
PGE GE G PGE +GPPGLP
Sbjct: 552 EPGELGEPGLPGEVGMRGPQGPPGLP 577
Score = 58.5 bits (140), Expect = 5e-09
Identities = 36/90 (40%), Positives = 40/90 (44%), Gaps = 11/90 (12%)
Query: 28 GSPGIPGTPGSHGLPGRDGRDGLKGDPGPPGPMGPPGEMPCP--------PGNDGLPGAP 79
G G PG PG GL GR G G +G GPPG G G P PG+ G PG
Sbjct: 871 GEKGDPGLPGEPGLQGRPGELGPQGPTGPPGAKGQEGAHGAPGAAGNPGAPGHVGAPGPS 930
Query: 80 GIPGECGE---KGEPGERGPPGLPAHLDEE 106
G PG G +G PG+ G G EE
Sbjct: 931 GPPGSVGAPGLRGTPGKDGERGEKGAAGEE 960
Score = 57.4 bits (137), Expect = 1e-08
Identities = 40/115 (34%), Positives = 46/115 (40%), Gaps = 44/115 (38%)
Query: 28 GSPGIPGTPGSHGLPGRDGRDGLKGDPGPPGPMG-----PPGEM---------PCPPGND 73
GS G+PG PG G GRDG G G+ GPPG G PG++ CPPG
Sbjct: 1063 GSRGLPGFPGPQGPAGRDGAPGNPGERGPPGKPGLSSLLSPGDINLLAKDVCNDCPPGPP 1122
Query: 74 GLPGA---------------------------PGIPGE---CGEKGEPGERGPPG 98
GLPG PG+PG G +G GERG G
Sbjct: 1123 GLPGLPGFKGDKGVPGKPGREGTEGKKGEAGPPGLPGPPGIAGPQGSQGERGADG 1177
Score = 55.1 bits (131), Expect = 6e-08
Identities = 36/97 (37%), Positives = 42/97 (43%), Gaps = 21/97 (21%)
Query: 28 GSPGIPGTPGSHGLPGRDGRDGLKGDPGPPGPMGP-------PGEM--PCPPGNDGLPGA 78
G G G PG G+ G G G G GPPG G GE P P G+ G PG
Sbjct: 614 GDTGQQGRPGPSGVAGPQGEKGDVGPAGPPGVPGSVVQQEGLKGEQGAPGPRGHQGAPGP 673
Query: 79 PGI------------PGECGEKGEPGERGPPGLPAHL 103
PG PG G +G+ G+ GPPG+P L
Sbjct: 674 PGARGPIGPEGRDGPPGLQGLRGKKGDMGPPGIPGLL 710
Score = 55.1 bits (131), Expect = 6e-08
Identities = 38/118 (32%), Positives = 41/118 (34%), Gaps = 46/118 (38%)
Query: 28 GSPGIPGTPGSHGLPGRDGRDGLKGDPGPPGPMGPPGE---------------------- 65
G PG PG PG G G G GL G+ GP GP GPPG+
Sbjct: 1411 GQPGDPGIPGHKGHTGLMGPQGLPGENGPVGPPGPPGQPGFPGLRGESPSMETLRRLIQE 1470
Query: 66 ---------------------MPCPPGNDGLPGAP---GIPGECGEKGEPGERGPPGL 99
M G G PG P G+PG G GEPG G GL
Sbjct: 1471 ELGKQLETRLAYLLAQMPPAYMKSSQGRPGPPGPPGKDGLPGRAGPMGEPGRPGQGGL 1528
Score = 40.4 bits (93), Expect = 0.001
Identities = 20/47 (42%), Positives = 22/47 (46%), Gaps = 5/47 (10%)
Query: 31 GIPGTPGSHGLPGRDGRDGLKGDPGPPGPMGPP-----GEMPCPPGN 72
G+PG PG G G G GL G PGPPG P + PGN
Sbjct: 1576 GLPGIPGPQGETGPAGHPGLPGPPGPPGQCDPSQCAYFASLAARPGN 1622
Score = 37.7 bits (86), Expect = 0.009
Identities = 27/88 (30%), Positives = 32/88 (36%), Gaps = 12/88 (13%)
Query: 54 PGPPGPMGPPG------------EMPCPPGNDGLPGAPGIPGECGEKGEPGERGPPGLPA 101
P PP P PP CP G G G G G G KG+ G GP G P
Sbjct: 452 PPPPPPQRPPTPGSEQIGFLKTINCSCPAGEKGEMGVAGPMGLPGPKGDIGAIGPVGAPG 511
Query: 102 HLDEELQATLHDFRHQILQTRGALSLQG 129
E+ + F +G+L L G
Sbjct: 512 PKGEKGDVGIGPFGQGEKGEKGSLGLPG 539
Score = 36.6 bits (83), Expect = 0.020
Identities = 20/43 (46%), Positives = 21/43 (48%), Gaps = 11/43 (25%)
Query: 28 GSPGIPGTPGSHGLPGRDGRDGLKGDPGPPGPMGPPGEMPCPP 70
G PGIPG G G G PG PGP GPPG+ C P
Sbjct: 1576 GLPGIPGP---------QGETGPAGHPGLPGPPGPPGQ--CDP 1607
>gi|194294532 alpha 1 type XIII collagen isoform 20 [Homo sapiens]
Length = 717
Score = 87.8 bits (216), Expect = 8e-18
Identities = 45/77 (58%), Positives = 47/77 (61%), Gaps = 7/77 (9%)
Query: 28 GSPGIPGTPGSHGLPGRDGRDGLKGDPGPPGPMGPPGEMPCPPGNDGLPGA------PGI 81
G+PGIPG G GLPG G DG KG G PG MGPPG PPG DG PG PG
Sbjct: 476 GAPGIPGQKGEIGLPGPPGHDGEKGPRGKPGDMGPPGPQG-PPGKDGPPGVKGENGHPGS 534
Query: 82 PGECGEKGEPGERGPPG 98
PGE GEKGE G+ G PG
Sbjct: 535 PGEKGEKGETGQAGSPG 551
Score = 71.6 bits (174), Expect = 6e-13
Identities = 44/98 (44%), Positives = 46/98 (46%), Gaps = 19/98 (19%)
Query: 28 GSPGIPGTPGSHGLPGRDGRDGLKGDPGPPGPMGPPG-----------EMPCPPGNDGLP 76
G PG PG G G PG G G G PGPPGP G PG MP PG G
Sbjct: 273 GPPGPPGPSGPLGHPGLPGPMGPPGLPGPPGPKGDPGIQGYHGRKGERGMPGMPGKHGAK 332
Query: 77 GAPGI--------PGECGEKGEPGERGPPGLPAHLDEE 106
GAPGI PG G KGE G G PGLP L ++
Sbjct: 333 GAPGIAVAGMKGEPGIPGTKGEKGAEGSPGLPGLLGQK 370
Score = 68.9 bits (167), Expect = 4e-12
Identities = 33/74 (44%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
Query: 28 GSPGIPGTPGSHGLPGRDGRDGLKGDPGPPGPMGPPGE--MPCPPGNDGLPGAPGIPGEC 85
G G+PG G GL G G G +G+ G GP+G PG + PG G PG G+PG
Sbjct: 580 GLQGVPGPKGEAGLDGAKGEKGFQGEKGDRGPLGLPGASGLDGRPGPPGTPGPIGVPGPA 639
Query: 86 GEKGEPGERGPPGL 99
G KGE G +G PG+
Sbjct: 640 GPKGERGSKGDPGM 653
Score = 68.2 bits (165), Expect = 6e-12
Identities = 37/79 (46%), Positives = 43/79 (54%), Gaps = 9/79 (11%)
Query: 28 GSPGIPGTPGSHGLPGRDGRDG--------LKGDPGPPGPMGPPGEMPCPPGNDGLPGAP 79
G PG+PG G+ G+PGR G G +G PG PG G PG P P G DG PG P
Sbjct: 128 GRPGLPGDKGAIGMPGRVGSPGDAGLSIIGPRGPPGQPGTRGFPG-FPGPIGLDGKPGHP 186
Query: 80 GIPGECGEKGEPGERGPPG 98
G G+ G G PG+ GP G
Sbjct: 187 GPKGDMGLTGPPGQPGPQG 205
Score = 67.8 bits (164), Expect = 8e-12
Identities = 35/71 (49%), Positives = 39/71 (54%), Gaps = 4/71 (5%)
Query: 28 GSPGIPGTPGSHGLPGRDGRDGLKGDPGPPGPMGPPGEMPCPPGNDGLPGAPGIPGECGE 87
G PG PGTPG G+PG G G +G G PG GP G P GL G PG G GE
Sbjct: 622 GRPGPPGTPGPIGVPGPAGPKGERGSKGDPGMTGPTGAAGLP----GLHGPPGDKGNRGE 677
Query: 88 KGEPGERGPPG 98
+G+ G RGP G
Sbjct: 678 RGKKGSRGPKG 688
Score = 67.0 bits (162), Expect = 1e-11
Identities = 36/74 (48%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Query: 27 VGSPGIPGTPGSHGLPGRDGRDGLKGDPGPPGPMGPPGEMPCPP-GNDGLPGAPGIPGEC 85
+G PG+PG PG G PG G G KG+ G PG G G P G+ G PGIPG
Sbjct: 293 MGPPGLPGPPGPKGDPGIQGYHGRKGERGMPGMPGKHGAKGAPGIAVAGMKGEPGIPGTK 352
Query: 86 GEKGEPGERGPPGL 99
GEKG G G PGL
Sbjct: 353 GEKGAEGSPGLPGL 366
Score = 67.0 bits (162), Expect = 1e-11
Identities = 40/105 (38%), Positives = 45/105 (42%), Gaps = 33/105 (31%)
Query: 27 VGSPGIPGTPGSHGLPGRDGRDGLKGD-------------------------------PG 55
VG PG PG G G G G DG KG PG
Sbjct: 408 VGPPGQPGDKGERGAAGEQGPDGPKGSKGEPGKGEMVDYNGNINEALQEIRTLALMGPPG 467
Query: 56 PPGPMGPPGE--MPCPPGNDGLPGAPGIPGECGEKGEPGERGPPG 98
PG +GPPG +P G GLPG PG GE G +G+PG+ GPPG
Sbjct: 468 LPGQIGPPGAPGIPGQKGEIGLPGPPGHDGEKGPRGKPGDMGPPG 512
Score = 66.6 bits (161), Expect = 2e-11
Identities = 35/71 (49%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Query: 28 GSPGIPGTPGSHGLPGRDGRDGLKGDPGPPGPMGPPGEMPCPPGNDGLPGAPGIPGECGE 87
G G G G GLPG G DG G PG PGP+G PG P G G G PG+ G G
Sbjct: 601 GFQGEKGDRGPLGLPGASGLDGRPGPPGTPGPIGVPGPAG-PKGERGSKGDPGMTGPTGA 659
Query: 88 KGEPGERGPPG 98
G PG GPPG
Sbjct: 660 AGLPGLHGPPG 670
Score = 65.1 bits (157), Expect = 5e-11
Identities = 48/140 (34%), Positives = 59/140 (42%), Gaps = 30/140 (21%)
Query: 28 GSPGIP--GTPGSHGLPGRDGRDGLKGDPGPPGPMGPPGE-------MPCPPGNDGLPGA 78
G+PGI G G G+PG G G +G PG PG +G GE + G G PG
Sbjct: 333 GAPGIAVAGMKGEPGIPGTKGEKGAEGSPGLPGLLGQKGEKGDAGNSIGGGRGEPGPPGL 392
Query: 79 PGIPGECGEKGEPGERGPPGLPAHLDEELQATLHDFRHQILQTRGALSLQGSIMTVGEKV 138
PG PG GE G G+ GPPG P E RGA QG G K
Sbjct: 393 PGPPGPKGEAGVDGQVGPPGQPGDKGE----------------RGAAGEQGPDGPKGSKG 436
Query: 139 FSSNGQSITF-----DAIQE 153
G+ + + +A+QE
Sbjct: 437 EPGKGEMVDYNGNINEALQE 456
Score = 64.3 bits (155), Expect = 9e-11
Identities = 39/89 (43%), Positives = 42/89 (47%), Gaps = 18/89 (20%)
Query: 26 CVGSPGIPGTPGSHGLPGRDGRDGLKGDPGPPG--------PMGPPGEMPCPPGNDGLPG 77
C PG PG G GLPG G G+ G G PG P GPPG+ PG G PG
Sbjct: 117 CNCPPGPPGPTGRPGLPGDKGAIGMPGRVGSPGDAGLSIIGPRGPPGQ----PGTRGFPG 172
Query: 78 AP------GIPGECGEKGEPGERGPPGLP 100
P G PG G KG+ G GPPG P
Sbjct: 173 FPGPIGLDGKPGHPGPKGDMGLTGPPGQP 201
Score = 62.4 bits (150), Expect = 3e-10
Identities = 41/113 (36%), Positives = 48/113 (42%), Gaps = 40/113 (35%)
Query: 28 GSPGIPGTPGSHGLPGRDGRDGLKGDPGPPGP------------MGPPGE---------- 65
G PG G PG G PG+DG G+KG+ G PG G PGE
Sbjct: 503 GKPGDMGPPGPQGPPGKDGPPGVKGENGHPGSPGEKGEKGETGQAGSPGEKGEAGEKGNP 562
Query: 66 ------MPCPPGNDGLPGAPGIPGECGE------------KGEPGERGPPGLP 100
+P P G G PG G+PG GE +GE G+RGP GLP
Sbjct: 563 GAEVPGLPGPEGPPGPPGLQGVPGPKGEAGLDGAKGEKGFQGEKGDRGPLGLP 615
Score = 60.8 bits (146), Expect = 1e-09
Identities = 43/121 (35%), Positives = 48/121 (39%), Gaps = 45/121 (37%)
Query: 28 GSPGIPGTPGSHGLPGRDGRDGLKGDP------------GPPGPMGPPGE---------- 65
G PG+PG PG G G DG+ G G P GP GP G GE
Sbjct: 388 GPPGLPGPPGPKGEAGVDGQVGPPGQPGDKGERGAAGEQGPDGPKGSKGEPGKGEMVDYN 447
Query: 66 -----------------MPCPPGNDGLPGAPGIPGECGEKGEP------GERGPPGLPAH 102
P PG G PGAPGIPG+ GE G P GE+GP G P
Sbjct: 448 GNINEALQEIRTLALMGPPGLPGQIGPPGAPGIPGQKGEIGLPGPPGHDGEKGPRGKPGD 507
Query: 103 L 103
+
Sbjct: 508 M 508
Score = 60.5 bits (145), Expect = 1e-09
Identities = 34/77 (44%), Positives = 37/77 (48%), Gaps = 7/77 (9%)
Query: 29 SPGIPGTPGSHGLPGRDGRDGLKGDPGPPGPMGPPGEMPC-------PPGNDGLPGAPGI 81
SPG PG G GR G G KG G PG +G PG+ PPG G G PG
Sbjct: 114 SPGCNCPPGPPGPTGRPGLPGDKGAIGMPGRVGSPGDAGLSIIGPRGPPGQPGTRGFPGF 173
Query: 82 PGECGEKGEPGERGPPG 98
PG G G+PG GP G
Sbjct: 174 PGPIGLDGKPGHPGPKG 190
Score = 60.5 bits (145), Expect = 1e-09
Identities = 30/61 (49%), Positives = 34/61 (55%), Gaps = 1/61 (1%)
Query: 27 VGSPGIPGTPGSHGLPGRDGRDGLKGDPGPPGPMGPPGEMPCPPGNDGLPGAPGIPGECG 86
+G G PG PG+ G PG G GL G PG PGP G G + PPG G G G G+CG
Sbjct: 156 IGPRGPPGQPGTRGFPGFPGPIGLDGKPGHPGPKGDMG-LTGPPGQPGPQGQKGEKGQCG 214
Query: 87 E 87
E
Sbjct: 215 E 215
Score = 59.7 bits (143), Expect = 2e-09
Identities = 32/70 (45%), Positives = 39/70 (55%), Gaps = 16/70 (22%)
Query: 43 GRDGRDGLKGDPGPPGPMGPPGEMPCPPGNDGLP---GAPGIPGECGEKGEP-------- 91
G + ++G PGPPGP GP G P G+ GLP G PG+PG G KG+P
Sbjct: 261 GEQSQASIQGPPGPPGPPGPSG----PLGHPGLPGPMGPPGLPGPPGPKGDPGIQGYHGR 316
Query: 92 -GERGPPGLP 100
GERG PG+P
Sbjct: 317 KGERGMPGMP 326
Score = 58.2 bits (139), Expect = 7e-09
Identities = 40/107 (37%), Positives = 45/107 (42%), Gaps = 34/107 (31%)
Query: 28 GSPGIPGTPGSHGLPGRDGRDGLKGD--------------PGPPGPMGPPG--EMPCPPG 71
G PG PG G G G+ G G KG+ PGP GP GPPG +P P G
Sbjct: 530 GHPGSPGEKGEKGETGQAGSPGEKGEAGEKGNPGAEVPGLPGPEGPPGPPGLQGVPGPKG 589
Query: 72 NDGLPGAPGIPGECGEKGE------------------PGERGPPGLP 100
GL GA G G GEKG+ PG GP G+P
Sbjct: 590 EAGLDGAKGEKGFQGEKGDRGPLGLPGASGLDGRPGPPGTPGPIGVP 636
Score = 49.3 bits (116), Expect = 3e-06
Identities = 25/56 (44%), Positives = 27/56 (48%), Gaps = 7/56 (12%)
Query: 28 GSPGIPGTPGSHGLPGRDGRDGLKGDPGPPGPMGPPGEM-------PCPPGNDGLP 76
G G G PG HG PG G G +G G GP G G+ PCP G DGLP
Sbjct: 655 GPTGAAGLPGLHGPPGDKGNRGERGKKGSRGPKGDKGDQGAPGLDAPCPLGEDGLP 710
Score = 48.9 bits (115), Expect = 4e-06
Identities = 41/134 (30%), Positives = 44/134 (32%), Gaps = 61/134 (45%)
Query: 28 GSPGIPGTPGSHGLPGRDGRDGLKGD---------PGPPGPMGPPGE------------M 66
G+ G PG PG GL G+ G G KGD PGP G G G+ M
Sbjct: 166 GTRGFPGFPGPIGLDGKPGHPGPKGDMGLTGPPGQPGPQGQKGEKGQCGEYPHRECLSSM 225
Query: 67 P----------------------CPP------------------GNDGLPGAPGIPGECG 86
P PP G G PG PG G G
Sbjct: 226 PAALRSSQIIALKLLPLLNSVRLAPPPVIKRRTFQGEQSQASIQGPPGPPGPPGPSGPLG 285
Query: 87 EKGEPGERGPPGLP 100
G PG GPPGLP
Sbjct: 286 HPGLPGPMGPPGLP 299
Score = 46.2 bits (108), Expect = 3e-05
Identities = 30/68 (44%), Positives = 33/68 (48%), Gaps = 12/68 (17%)
Query: 41 LPGRDGRDGLKGDPGPPGPMGPPGEMPCPPGNDGLP---GAPGIPGECGEKGEP-----G 92
L R R+ K PG P GPPG P G GLP GA G+PG G G+ G
Sbjct: 102 LHSRRRREAPKTSPGCNCPPGPPG----PTGRPGLPGDKGAIGMPGRVGSPGDAGLSIIG 157
Query: 93 ERGPPGLP 100
RGPPG P
Sbjct: 158 PRGPPGQP 165
Score = 30.4 bits (67), Expect = 1.5
Identities = 13/35 (37%), Positives = 18/35 (51%)
Query: 69 PPGNDGLPGAPGIPGECGEKGEPGERGPPGLPAHL 103
P + G PG PG G G PG++G G+P +
Sbjct: 111 PKTSPGCNCPPGPPGPTGRPGLPGDKGAIGMPGRV 145
>gi|22027607 alpha 1 type XIII collagen isoform 18 [Homo sapiens]
Length = 655
Score = 87.8 bits (216), Expect = 8e-18
Identities = 45/77 (58%), Positives = 47/77 (61%), Gaps = 7/77 (9%)
Query: 28 GSPGIPGTPGSHGLPGRDGRDGLKGDPGPPGPMGPPGEMPCPPGNDGLPGA------PGI 81
G+PGIPG G GLPG G DG KG G PG MGPPG PPG DG PG PG
Sbjct: 414 GAPGIPGQKGEIGLPGPPGHDGEKGPRGKPGDMGPPGPQG-PPGKDGPPGVKGENGHPGS 472
Query: 82 PGECGEKGEPGERGPPG 98
PGE GEKGE G+ G PG
Sbjct: 473 PGEKGEKGETGQAGSPG 489
Score = 71.6 bits (174), Expect = 6e-13
Identities = 44/98 (44%), Positives = 46/98 (46%), Gaps = 19/98 (19%)
Query: 28 GSPGIPGTPGSHGLPGRDGRDGLKGDPGPPGPMGPPG-----------EMPCPPGNDGLP 76
G PG PG G G PG G G G PGPPGP G PG MP PG G
Sbjct: 211 GPPGPPGPSGPLGHPGLPGPMGPPGLPGPPGPKGDPGIQGYHGRKGERGMPGMPGKHGAK 270
Query: 77 GAPGI--------PGECGEKGEPGERGPPGLPAHLDEE 106
GAPGI PG G KGE G G PGLP L ++
Sbjct: 271 GAPGIAVAGMKGEPGIPGTKGEKGAEGSPGLPGLLGQK 308
Score = 68.9 bits (167), Expect = 4e-12
Identities = 33/74 (44%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
Query: 28 GSPGIPGTPGSHGLPGRDGRDGLKGDPGPPGPMGPPGE--MPCPPGNDGLPGAPGIPGEC 85
G G+PG G GL G G G +G+ G GP+G PG + PG G PG G+PG
Sbjct: 518 GLQGVPGPKGEAGLDGAKGEKGFQGEKGDRGPLGLPGASGLDGRPGPPGTPGPIGVPGPA 577
Query: 86 GEKGEPGERGPPGL 99
G KGE G +G PG+
Sbjct: 578 GPKGERGSKGDPGM 591
Score = 67.8 bits (164), Expect = 8e-12
Identities = 37/84 (44%), Positives = 42/84 (50%), Gaps = 13/84 (15%)
Query: 27 VGSPGIPGTPGSHGLPGRDGRDGLKGDPGPPGPMGPPGEMPCPPGNDGLPGAPGIPGECG 86
+G G PG PG+ G PG G GL G PG PGP G G + PPG G G G G+CG
Sbjct: 135 IGPRGPPGQPGTRGFPGFPGPIGLDGKPGHPGPKGDMG-LTGPPGQPGPQGQKGEKGQCG 193
Query: 87 E------------KGEPGERGPPG 98
E +G PG GPPG
Sbjct: 194 EYPHRGEQSQASIQGPPGPPGPPG 217
Score = 67.8 bits (164), Expect = 8e-12
Identities = 41/98 (41%), Positives = 49/98 (50%), Gaps = 28/98 (28%)
Query: 27 VGSPGIPGTPGSHGLPGRDGRDG------------LKGDPGPPGPMGPPGEMPCPPGNDG 74
+G G PG PG G G G+ G ++G PGPPGP GP G P G+ G
Sbjct: 171 MGLTGPPGQPGPQGQKGEKGQCGEYPHRGEQSQASIQGPPGPPGPPGPSG----PLGHPG 226
Query: 75 LP---GAPGIPGECGEKGEP---------GERGPPGLP 100
LP G PG+PG G KG+P GERG PG+P
Sbjct: 227 LPGPMGPPGLPGPPGPKGDPGIQGYHGRKGERGMPGMP 264
Score = 67.8 bits (164), Expect = 8e-12
Identities = 35/71 (49%), Positives = 39/71 (54%), Gaps = 4/71 (5%)
Query: 28 GSPGIPGTPGSHGLPGRDGRDGLKGDPGPPGPMGPPGEMPCPPGNDGLPGAPGIPGECGE 87
G PG PGTPG G+PG G G +G G PG GP G P GL G PG G GE
Sbjct: 560 GRPGPPGTPGPIGVPGPAGPKGERGSKGDPGMTGPTGAAGLP----GLHGPPGDKGNRGE 615
Query: 88 KGEPGERGPPG 98
+G+ G RGP G
Sbjct: 616 RGKKGSRGPKG 626
Score = 67.0 bits (162), Expect = 1e-11
Identities = 36/74 (48%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Query: 27 VGSPGIPGTPGSHGLPGRDGRDGLKGDPGPPGPMGPPGEMPCPP-GNDGLPGAPGIPGEC 85
+G PG+PG PG G PG G G KG+ G PG G G P G+ G PGIPG
Sbjct: 231 MGPPGLPGPPGPKGDPGIQGYHGRKGERGMPGMPGKHGAKGAPGIAVAGMKGEPGIPGTK 290
Query: 86 GEKGEPGERGPPGL 99
GEKG G G PGL
Sbjct: 291 GEKGAEGSPGLPGL 304
Score = 67.0 bits (162), Expect = 1e-11
Identities = 40/105 (38%), Positives = 45/105 (42%), Gaps = 33/105 (31%)
Query: 27 VGSPGIPGTPGSHGLPGRDGRDGLKGD-------------------------------PG 55
VG PG PG G G G G DG KG PG
Sbjct: 346 VGPPGQPGDKGERGAAGEQGPDGPKGSKGEPGKGEMVDYNGNINEALQEIRTLALMGPPG 405
Query: 56 PPGPMGPPGE--MPCPPGNDGLPGAPGIPGECGEKGEPGERGPPG 98
PG +GPPG +P G GLPG PG GE G +G+PG+ GPPG
Sbjct: 406 LPGQIGPPGAPGIPGQKGEIGLPGPPGHDGEKGPRGKPGDMGPPG 450
Score = 66.6 bits (161), Expect = 2e-11
Identities = 35/71 (49%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Query: 28 GSPGIPGTPGSHGLPGRDGRDGLKGDPGPPGPMGPPGEMPCPPGNDGLPGAPGIPGECGE 87
G G G G GLPG G DG G PG PGP+G PG P G G G PG+ G G
Sbjct: 539 GFQGEKGDRGPLGLPGASGLDGRPGPPGTPGPIGVPGPAG-PKGERGSKGDPGMTGPTGA 597
Query: 88 KGEPGERGPPG 98
G PG GPPG
Sbjct: 598 AGLPGLHGPPG 608
Score = 65.1 bits (157), Expect = 5e-11
Identities = 48/140 (34%), Positives = 59/140 (42%), Gaps = 30/140 (21%)
Query: 28 GSPGIP--GTPGSHGLPGRDGRDGLKGDPGPPGPMGPPGE-------MPCPPGNDGLPGA 78
G+PGI G G G+PG G G +G PG PG +G GE + G G PG
Sbjct: 271 GAPGIAVAGMKGEPGIPGTKGEKGAEGSPGLPGLLGQKGEKGDAGNSIGGGRGEPGPPGL 330
Query: 79 PGIPGECGEKGEPGERGPPGLPAHLDEELQATLHDFRHQILQTRGALSLQGSIMTVGEKV 138
PG PG GE G G+ GPPG P E RGA QG G K
Sbjct: 331 PGPPGPKGEAGVDGQVGPPGQPGDKGE----------------RGAAGEQGPDGPKGSKG 374
Query: 139 FSSNGQSITF-----DAIQE 153
G+ + + +A+QE
Sbjct: 375 EPGKGEMVDYNGNINEALQE 394
Score = 62.4 bits (150), Expect = 3e-10
Identities = 37/95 (38%), Positives = 42/95 (44%), Gaps = 22/95 (23%)
Query: 28 GSPGIPGTPGSHGLPGRDGRDGLKGDPGPPGPMGPPGE----------MPCPPGNDGLPG 77
G PG+ G G G PG G G G G PG G GE +P P G G PG
Sbjct: 459 GPPGVKGENGHPGSPGEKGEKGETGQAGSPGEKGEAGEKGNPGAEVPGLPGPEGPPGPPG 518
Query: 78 APGIPGECGE------------KGEPGERGPPGLP 100
G+PG GE +GE G+RGP GLP
Sbjct: 519 LQGVPGPKGEAGLDGAKGEKGFQGEKGDRGPLGLP 553
Score = 60.8 bits (146), Expect = 1e-09
Identities = 39/94 (41%), Positives = 47/94 (50%), Gaps = 6/94 (6%)
Query: 20 CEVKDVCVGSPGIPGTP--GSHGLPGRDGRDGLKGDPGPPGPMGPPGEMPCPPGNDGLPG 77
C GSPG G G G PG+ G G G PGP G G PG P P G+ GL G
Sbjct: 117 CNCPPAPQGSPGDAGLSIIGPRGPPGQPGTRGFPGFPGPIGLDGKPGH-PGPKGDMGLTG 175
Query: 78 APGIPGECGEKGEPGERGPPGLPAHLDEELQATL 111
PG PG +G+ GE+G G H E+ QA++
Sbjct: 176 PPGQPGP---QGQKGEKGQCGEYPHRGEQSQASI 206
Score = 60.8 bits (146), Expect = 1e-09
Identities = 43/121 (35%), Positives = 48/121 (39%), Gaps = 45/121 (37%)
Query: 28 GSPGIPGTPGSHGLPGRDGRDGLKGDP------------GPPGPMGPPGE---------- 65
G PG+PG PG G G DG+ G G P GP GP G GE
Sbjct: 326 GPPGLPGPPGPKGEAGVDGQVGPPGQPGDKGERGAAGEQGPDGPKGSKGEPGKGEMVDYN 385
Query: 66 -----------------MPCPPGNDGLPGAPGIPGECGEKGEP------GERGPPGLPAH 102
P PG G PGAPGIPG+ GE G P GE+GP G P
Sbjct: 386 GNINEALQEIRTLALMGPPGLPGQIGPPGAPGIPGQKGEIGLPGPPGHDGEKGPRGKPGD 445
Query: 103 L 103
+
Sbjct: 446 M 446
Score = 58.2 bits (139), Expect = 7e-09
Identities = 40/107 (37%), Positives = 45/107 (42%), Gaps = 34/107 (31%)
Query: 28 GSPGIPGTPGSHGLPGRDGRDGLKGD--------------PGPPGPMGPPG--EMPCPPG 71
G PG PG G G G+ G G KG+ PGP GP GPPG +P P G
Sbjct: 468 GHPGSPGEKGEKGETGQAGSPGEKGEAGEKGNPGAEVPGLPGPEGPPGPPGLQGVPGPKG 527
Query: 72 NDGLPGAPGIPGECGEKGE------------------PGERGPPGLP 100
GL GA G G GEKG+ PG GP G+P
Sbjct: 528 EAGLDGAKGEKGFQGEKGDRGPLGLPGASGLDGRPGPPGTPGPIGVP 574
Score = 49.3 bits (116), Expect = 3e-06
Identities = 25/56 (44%), Positives = 27/56 (48%), Gaps = 7/56 (12%)
Query: 28 GSPGIPGTPGSHGLPGRDGRDGLKGDPGPPGPMGPPGEM-------PCPPGNDGLP 76
G G G PG HG PG G G +G G GP G G+ PCP G DGLP
Sbjct: 593 GPTGAAGLPGLHGPPGDKGNRGERGKKGSRGPKGDKGDQGAPGLDAPCPLGEDGLP 648
>gi|22027605 alpha 1 type XIII collagen isoform 17 [Homo sapiens]
Length = 657
Score = 87.8 bits (216), Expect = 8e-18
Identities = 45/77 (58%), Positives = 47/77 (61%), Gaps = 7/77 (9%)
Query: 28 GSPGIPGTPGSHGLPGRDGRDGLKGDPGPPGPMGPPGEMPCPPGNDGLPGA------PGI 81
G+PGIPG G GLPG G DG KG G PG MGPPG PPG DG PG PG
Sbjct: 416 GAPGIPGQKGEIGLPGPPGHDGEKGPRGKPGDMGPPGPQG-PPGKDGPPGVKGENGHPGS 474
Query: 82 PGECGEKGEPGERGPPG 98
PGE GEKGE G+ G PG
Sbjct: 475 PGEKGEKGETGQAGSPG 491
Score = 71.6 bits (174), Expect = 6e-13
Identities = 44/98 (44%), Positives = 46/98 (46%), Gaps = 19/98 (19%)
Query: 28 GSPGIPGTPGSHGLPGRDGRDGLKGDPGPPGPMGPPG-----------EMPCPPGNDGLP 76
G PG PG G G PG G G G PGPPGP G PG MP PG G
Sbjct: 213 GPPGPPGPSGPLGHPGLPGPMGPPGLPGPPGPKGDPGIQGYHGRKGERGMPGMPGKHGAK 272
Query: 77 GAPGI--------PGECGEKGEPGERGPPGLPAHLDEE 106
GAPGI PG G KGE G G PGLP L ++
Sbjct: 273 GAPGIAVAGMKGEPGIPGTKGEKGAEGSPGLPGLLGQK 310
Score = 68.9 bits (167), Expect = 4e-12
Identities = 33/74 (44%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
Query: 28 GSPGIPGTPGSHGLPGRDGRDGLKGDPGPPGPMGPPGE--MPCPPGNDGLPGAPGIPGEC 85
G G+PG G GL G G G +G+ G GP+G PG + PG G PG G+PG
Sbjct: 520 GLQGVPGPKGEAGLDGAKGEKGFQGEKGDRGPLGLPGASGLDGRPGPPGTPGPIGVPGPA 579
Query: 86 GEKGEPGERGPPGL 99
G KGE G +G PG+
Sbjct: 580 GPKGERGSKGDPGM 593
Score = 67.8 bits (164), Expect = 8e-12
Identities = 35/71 (49%), Positives = 39/71 (54%), Gaps = 4/71 (5%)
Query: 28 GSPGIPGTPGSHGLPGRDGRDGLKGDPGPPGPMGPPGEMPCPPGNDGLPGAPGIPGECGE 87
G PG PGTPG G+PG G G +G G PG GP G P GL G PG G GE
Sbjct: 562 GRPGPPGTPGPIGVPGPAGPKGERGSKGDPGMTGPTGAAGLP----GLHGPPGDKGNRGE 617
Query: 88 KGEPGERGPPG 98
+G+ G RGP G
Sbjct: 618 RGKKGSRGPKG 628
Score = 67.0 bits (162), Expect = 1e-11
Identities = 36/74 (48%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Query: 27 VGSPGIPGTPGSHGLPGRDGRDGLKGDPGPPGPMGPPGEMPCPP-GNDGLPGAPGIPGEC 85
+G PG+PG PG G PG G G KG+ G PG G G P G+ G PGIPG
Sbjct: 233 MGPPGLPGPPGPKGDPGIQGYHGRKGERGMPGMPGKHGAKGAPGIAVAGMKGEPGIPGTK 292
Query: 86 GEKGEPGERGPPGL 99
GEKG G G PGL
Sbjct: 293 GEKGAEGSPGLPGL 306
Score = 67.0 bits (162), Expect = 1e-11
Identities = 40/105 (38%), Positives = 45/105 (42%), Gaps = 33/105 (31%)
Query: 27 VGSPGIPGTPGSHGLPGRDGRDGLKGD-------------------------------PG 55
VG PG PG G G G G DG KG PG
Sbjct: 348 VGPPGQPGDKGERGAAGEQGPDGPKGSKGEPGKGEMVDYNGNINEALQEIRTLALMGPPG 407
Query: 56 PPGPMGPPGE--MPCPPGNDGLPGAPGIPGECGEKGEPGERGPPG 98
PG +GPPG +P G GLPG PG GE G +G+PG+ GPPG
Sbjct: 408 LPGQIGPPGAPGIPGQKGEIGLPGPPGHDGEKGPRGKPGDMGPPG 452
Score = 66.6 bits (161), Expect = 2e-11
Identities = 35/71 (49%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Query: 28 GSPGIPGTPGSHGLPGRDGRDGLKGDPGPPGPMGPPGEMPCPPGNDGLPGAPGIPGECGE 87
G G G G GLPG G DG G PG PGP+G PG P G G G PG+ G G
Sbjct: 541 GFQGEKGDRGPLGLPGASGLDGRPGPPGTPGPIGVPGPAG-PKGERGSKGDPGMTGPTGA 599
Query: 88 KGEPGERGPPG 98
G PG GPPG
Sbjct: 600 AGLPGLHGPPG 610
Score = 65.1 bits (157), Expect = 5e-11
Identities = 48/140 (34%), Positives = 59/140 (42%), Gaps = 30/140 (21%)
Query: 28 GSPGIP--GTPGSHGLPGRDGRDGLKGDPGPPGPMGPPGE-------MPCPPGNDGLPGA 78
G+PGI G G G+PG G G +G PG PG +G GE + G G PG
Sbjct: 273 GAPGIAVAGMKGEPGIPGTKGEKGAEGSPGLPGLLGQKGEKGDAGNSIGGGRGEPGPPGL 332
Query: 79 PGIPGECGEKGEPGERGPPGLPAHLDEELQATLHDFRHQILQTRGALSLQGSIMTVGEKV 138
PG PG GE G G+ GPPG P E RGA QG G K
Sbjct: 333 PGPPGPKGEAGVDGQVGPPGQPGDKGE----------------RGAAGEQGPDGPKGSKG 376
Query: 139 FSSNGQSITF-----DAIQE 153
G+ + + +A+QE
Sbjct: 377 EPGKGEMVDYNGNINEALQE 396
Score = 62.4 bits (150), Expect = 3e-10
Identities = 41/113 (36%), Positives = 48/113 (42%), Gaps = 40/113 (35%)
Query: 28 GSPGIPGTPGSHGLPGRDGRDGLKGDPGPPGP------------MGPPGE---------- 65
G PG G PG G PG+DG G+KG+ G PG G PGE
Sbjct: 443 GKPGDMGPPGPQGPPGKDGPPGVKGENGHPGSPGEKGEKGETGQAGSPGEKGEAGEKGNP 502
Query: 66 ------MPCPPGNDGLPGAPGIPGECGE------------KGEPGERGPPGLP 100
+P P G G PG G+PG GE +GE G+RGP GLP
Sbjct: 503 GAEVPGLPGPEGPPGPPGLQGVPGPKGEAGLDGAKGEKGFQGEKGDRGPLGLP 555
Score = 60.8 bits (146), Expect = 1e-09
Identities = 33/72 (45%), Positives = 40/72 (55%), Gaps = 16/72 (22%)
Query: 41 LPGRDGRDGLKGDPGPPGPMGPPGEMPCPPGNDGLP---GAPGIPGECGEKGEP------ 91
L G + ++G PGPPGP GP G P G+ GLP G PG+PG G KG+P
Sbjct: 199 LKGEQSQASIQGPPGPPGPPGPSG----PLGHPGLPGPMGPPGLPGPPGPKGDPGIQGYH 254
Query: 92 ---GERGPPGLP 100
GERG PG+P
Sbjct: 255 GRKGERGMPGMP 266
Score = 60.8 bits (146), Expect = 1e-09
Identities = 43/121 (35%), Positives = 48/121 (39%), Gaps = 45/121 (37%)
Query: 28 GSPGIPGTPGSHGLPGRDGRDGLKGDP------------GPPGPMGPPGE---------- 65
G PG+PG PG G G DG+ G G P GP GP G GE
Sbjct: 328 GPPGLPGPPGPKGEAGVDGQVGPPGQPGDKGERGAAGEQGPDGPKGSKGEPGKGEMVDYN 387
Query: 66 -----------------MPCPPGNDGLPGAPGIPGECGEKGEP------GERGPPGLPAH 102
P PG G PGAPGIPG+ GE G P GE+GP G P
Sbjct: 388 GNINEALQEIRTLALMGPPGLPGQIGPPGAPGIPGQKGEIGLPGPPGHDGEKGPRGKPGD 447
Query: 103 L 103
+
Sbjct: 448 M 448
Score = 60.1 bits (144), Expect = 2e-09
Identities = 41/112 (36%), Positives = 43/112 (38%), Gaps = 39/112 (34%)
Query: 28 GSPGIPGTPGSHGLPGRDGRDGLKGD------PGPPGPMGPPGE---------------M 66
G+ G PG PG GL G+ G G KGD PG PGP G GE M
Sbjct: 128 GTRGFPGFPGPIGLDGKPGHPGPKGDMGLTGPPGQPGPQGQKGEKGQCGEYPHRECLSSM 187
Query: 67 PCP------------------PGNDGLPGAPGIPGECGEKGEPGERGPPGLP 100
P G G PG PG G G G PG GPPGLP
Sbjct: 188 PAALRSSQIIALKGEQSQASIQGPPGPPGPPGPSGPLGHPGLPGPMGPPGLP 239
Score = 58.2 bits (139), Expect = 7e-09
Identities = 40/107 (37%), Positives = 45/107 (42%), Gaps = 34/107 (31%)
Query: 28 GSPGIPGTPGSHGLPGRDGRDGLKGD--------------PGPPGPMGPPG--EMPCPPG 71
G PG PG G G G+ G G KG+ PGP GP GPPG +P P G
Sbjct: 470 GHPGSPGEKGEKGETGQAGSPGEKGEAGEKGNPGAEVPGLPGPEGPPGPPGLQGVPGPKG 529
Query: 72 NDGLPGAPGIPGECGEKGE------------------PGERGPPGLP 100
GL GA G G GEKG+ PG GP G+P
Sbjct: 530 EAGLDGAKGEKGFQGEKGDRGPLGLPGASGLDGRPGPPGTPGPIGVP 576
Score = 56.6 bits (135), Expect = 2e-08
Identities = 37/100 (37%), Positives = 42/100 (42%), Gaps = 26/100 (26%)
Query: 26 CVGSPGIPGTPGSHGLPGRDGRDGLKGDPGPPGPMGPPGEMPCPPGNDGLPGAPGIPGEC 85
C P G PG+ G PG G GL G PG PGP G G + PPG G G G G+C
Sbjct: 117 CNCPPVFQGQPGTRGFPGFPGPIGLDGKPGHPGPKGDMG-LTGPPGQPGPQGQKGEKGQC 175
Query: 86 GE----------------------KGEPGE---RGPPGLP 100
GE KGE + +GPPG P
Sbjct: 176 GEYPHRECLSSMPAALRSSQIIALKGEQSQASIQGPPGPP 215
Score = 52.4 bits (124), Expect = 4e-07
Identities = 32/67 (47%), Positives = 35/67 (52%), Gaps = 4/67 (5%)
Query: 29 SPGIPGTPGSHGLPGRDGRDGLKGDPGPPGPMGPPGEMPCPPGNDGLPGAPGIPGECGEK 88
SPG P G PG G G PGP G G PG P P G+ GL G PG PG G+K
Sbjct: 114 SPGCNCPPVFQGQPGTRGFPGF---PGPIGLDGKPGH-PGPKGDMGLTGPPGQPGPQGQK 169
Query: 89 GEPGERG 95
GE G+ G
Sbjct: 170 GEKGQCG 176
Score = 49.3 bits (116), Expect = 3e-06
Identities = 25/56 (44%), Positives = 27/56 (48%), Gaps = 7/56 (12%)
Query: 28 GSPGIPGTPGSHGLPGRDGRDGLKGDPGPPGPMGPPGEM-------PCPPGNDGLP 76
G G G PG HG PG G G +G G GP G G+ PCP G DGLP
Sbjct: 595 GPTGAAGLPGLHGPPGDKGNRGERGKKGSRGPKGDKGDQGAPGLDAPCPLGEDGLP 650
Score = 43.5 bits (101), Expect = 2e-04
Identities = 32/103 (31%), Positives = 42/103 (40%), Gaps = 13/103 (12%)
Query: 35 TPGSHGLPGRDGRDGLKGDPGPPGPMGPPGEMPCPPGNDGLPGAPGIPGECGEKGEPGER 94
+PG + P G+ G +G PG PGP+G L G PG PG G+ G G
Sbjct: 114 SPGCNCPPVFQGQPGTRGFPGFPGPIG-------------LDGKPGHPGPKGDMGLTGPP 160
Query: 95 GPPGLPAHLDEELQATLHDFRHQILQTRGALSLQGSIMTVGEK 137
G PG E+ Q + R + AL I GE+
Sbjct: 161 GQPGPQGQKGEKGQCGEYPHRECLSSMPAALRSSQIIALKGEQ 203
>gi|22027603 alpha 1 type XIII collagen isoform 16 [Homo sapiens]
Length = 660
Score = 87.8 bits (216), Expect = 8e-18
Identities = 45/77 (58%), Positives = 47/77 (61%), Gaps = 7/77 (9%)
Query: 28 GSPGIPGTPGSHGLPGRDGRDGLKGDPGPPGPMGPPGEMPCPPGNDGLPGA------PGI 81
G+PGIPG G GLPG G DG KG G PG MGPPG PPG DG PG PG
Sbjct: 419 GAPGIPGQKGEIGLPGPPGHDGEKGPRGKPGDMGPPGPQG-PPGKDGPPGVKGENGHPGS 477
Query: 82 PGECGEKGEPGERGPPG 98
PGE GEKGE G+ G PG
Sbjct: 478 PGEKGEKGETGQAGSPG 494
Score = 71.6 bits (174), Expect = 6e-13
Identities = 44/98 (44%), Positives = 46/98 (46%), Gaps = 19/98 (19%)
Query: 28 GSPGIPGTPGSHGLPGRDGRDGLKGDPGPPGPMGPPG-----------EMPCPPGNDGLP 76
G PG PG G G PG G G G PGPPGP G PG MP PG G
Sbjct: 216 GPPGPPGPSGPLGHPGLPGPMGPPGLPGPPGPKGDPGIQGYHGRKGERGMPGMPGKHGAK 275
Query: 77 GAPGI--------PGECGEKGEPGERGPPGLPAHLDEE 106
GAPGI PG G KGE G G PGLP L ++
Sbjct: 276 GAPGIAVAGMKGEPGIPGTKGEKGAEGSPGLPGLLGQK 313
Score = 68.9 bits (167), Expect = 4e-12
Identities = 33/74 (44%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
Query: 28 GSPGIPGTPGSHGLPGRDGRDGLKGDPGPPGPMGPPGE--MPCPPGNDGLPGAPGIPGEC 85
G G+PG G GL G G G +G+ G GP+G PG + PG G PG G+PG
Sbjct: 523 GLQGVPGPKGEAGLDGAKGEKGFQGEKGDRGPLGLPGASGLDGRPGPPGTPGPIGVPGPA 582
Query: 86 GEKGEPGERGPPGL 99
G KGE G +G PG+
Sbjct: 583 GPKGERGSKGDPGM 596
Score = 67.8 bits (164), Expect = 8e-12
Identities = 35/71 (49%), Positives = 39/71 (54%), Gaps = 4/71 (5%)
Query: 28 GSPGIPGTPGSHGLPGRDGRDGLKGDPGPPGPMGPPGEMPCPPGNDGLPGAPGIPGECGE 87
G PG PGTPG G+PG G G +G G PG GP G P GL G PG G GE
Sbjct: 565 GRPGPPGTPGPIGVPGPAGPKGERGSKGDPGMTGPTGAAGLP----GLHGPPGDKGNRGE 620
Query: 88 KGEPGERGPPG 98
+G+ G RGP G
Sbjct: 621 RGKKGSRGPKG 631
Score = 67.0 bits (162), Expect = 1e-11
Identities = 36/74 (48%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Query: 27 VGSPGIPGTPGSHGLPGRDGRDGLKGDPGPPGPMGPPGEMPCPP-GNDGLPGAPGIPGEC 85
+G PG+PG PG G PG G G KG+ G PG G G P G+ G PGIPG
Sbjct: 236 MGPPGLPGPPGPKGDPGIQGYHGRKGERGMPGMPGKHGAKGAPGIAVAGMKGEPGIPGTK 295
Query: 86 GEKGEPGERGPPGL 99
GEKG G G PGL
Sbjct: 296 GEKGAEGSPGLPGL 309
Score = 67.0 bits (162), Expect = 1e-11
Identities = 40/105 (38%), Positives = 45/105 (42%), Gaps = 33/105 (31%)
Query: 27 VGSPGIPGTPGSHGLPGRDGRDGLKGD-------------------------------PG 55
VG PG PG G G G G DG KG PG
Sbjct: 351 VGPPGQPGDKGERGAAGEQGPDGPKGSKGEPGKGEMVDYNGNINEALQEIRTLALMGPPG 410
Query: 56 PPGPMGPPGE--MPCPPGNDGLPGAPGIPGECGEKGEPGERGPPG 98
PG +GPPG +P G GLPG PG GE G +G+PG+ GPPG
Sbjct: 411 LPGQIGPPGAPGIPGQKGEIGLPGPPGHDGEKGPRGKPGDMGPPG 455
Score = 66.6 bits (161), Expect = 2e-11
Identities = 35/71 (49%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Query: 28 GSPGIPGTPGSHGLPGRDGRDGLKGDPGPPGPMGPPGEMPCPPGNDGLPGAPGIPGECGE 87
G G G G GLPG G DG G PG PGP+G PG P G G G PG+ G G
Sbjct: 544 GFQGEKGDRGPLGLPGASGLDGRPGPPGTPGPIGVPGPAG-PKGERGSKGDPGMTGPTGA 602
Query: 88 KGEPGERGPPG 98
G PG GPPG
Sbjct: 603 AGLPGLHGPPG 613
Score = 65.1 bits (157), Expect = 5e-11
Identities = 48/140 (34%), Positives = 59/140 (42%), Gaps = 30/140 (21%)
Query: 28 GSPGIP--GTPGSHGLPGRDGRDGLKGDPGPPGPMGPPGE-------MPCPPGNDGLPGA 78
G+PGI G G G+PG G G +G PG PG +G GE + G G PG
Sbjct: 276 GAPGIAVAGMKGEPGIPGTKGEKGAEGSPGLPGLLGQKGEKGDAGNSIGGGRGEPGPPGL 335
Query: 79 PGIPGECGEKGEPGERGPPGLPAHLDEELQATLHDFRHQILQTRGALSLQGSIMTVGEKV 138
PG PG GE G G+ GPPG P E RGA QG G K
Sbjct: 336 PGPPGPKGEAGVDGQVGPPGQPGDKGE----------------RGAAGEQGPDGPKGSKG 379
Query: 139 FSSNGQSITF-----DAIQE 153
G+ + + +A+QE
Sbjct: 380 EPGKGEMVDYNGNINEALQE 399
Score = 62.4 bits (150), Expect = 3e-10
Identities = 41/113 (36%), Positives = 48/113 (42%), Gaps = 40/113 (35%)
Query: 28 GSPGIPGTPGSHGLPGRDGRDGLKGDPGPPGP------------MGPPGE---------- 65
G PG G PG G PG+DG G+KG+ G PG G PGE
Sbjct: 446 GKPGDMGPPGPQGPPGKDGPPGVKGENGHPGSPGEKGEKGETGQAGSPGEKGEAGEKGNP 505
Query: 66 ------MPCPPGNDGLPGAPGIPGECGE------------KGEPGERGPPGLP 100
+P P G G PG G+PG GE +GE G+RGP GLP
Sbjct: 506 GAEVPGLPGPEGPPGPPGLQGVPGPKGEAGLDGAKGEKGFQGEKGDRGPLGLP 558
Score = 60.8 bits (146), Expect = 1e-09
Identities = 43/121 (35%), Positives = 48/121 (39%), Gaps = 45/121 (37%)
Query: 28 GSPGIPGTPGSHGLPGRDGRDGLKGDP------------GPPGPMGPPGE---------- 65
G PG+PG PG G G DG+ G G P GP GP G GE
Sbjct: 331 GPPGLPGPPGPKGEAGVDGQVGPPGQPGDKGERGAAGEQGPDGPKGSKGEPGKGEMVDYN 390
Query: 66 -----------------MPCPPGNDGLPGAPGIPGECGEKGEP------GERGPPGLPAH 102
P PG G PGAPGIPG+ GE G P GE+GP G P
Sbjct: 391 GNINEALQEIRTLALMGPPGLPGQIGPPGAPGIPGQKGEIGLPGPPGHDGEKGPRGKPGD 450
Query: 103 L 103
+
Sbjct: 451 M 451
Score = 59.7 bits (143), Expect = 2e-09
Identities = 42/115 (36%), Positives = 45/115 (39%), Gaps = 42/115 (36%)
Query: 28 GSPGIPGTPGSHGLPGRDGRDGLKGD------PGPPGPMGPPGE-----------MP--- 67
G+ G PG PG GL G+ G G KGD PG PGP G GE +P
Sbjct: 128 GTRGFPGFPGPIGLDGKPGHPGPKGDMGLTGPPGQPGPQGQKGEKGQCGEYPHRLLPLLN 187
Query: 68 ----CPP------------------GNDGLPGAPGIPGECGEKGEPGERGPPGLP 100
PP G G PG PG G G G PG GPPGLP
Sbjct: 188 SVRLAPPPVIKRRTFQGEQSQASIQGPPGPPGPPGPSGPLGHPGLPGPMGPPGLP 242
Score = 59.7 bits (143), Expect = 2e-09
Identities = 32/70 (45%), Positives = 39/70 (55%), Gaps = 16/70 (22%)
Query: 43 GRDGRDGLKGDPGPPGPMGPPGEMPCPPGNDGLP---GAPGIPGECGEKGEP-------- 91
G + ++G PGPPGP GP G P G+ GLP G PG+PG G KG+P
Sbjct: 204 GEQSQASIQGPPGPPGPPGPSG----PLGHPGLPGPMGPPGLPGPPGPKGDPGIQGYHGR 259
Query: 92 -GERGPPGLP 100
GERG PG+P
Sbjct: 260 KGERGMPGMP 269
Score = 58.2 bits (139), Expect = 7e-09
Identities = 40/107 (37%), Positives = 45/107 (42%), Gaps = 34/107 (31%)
Query: 28 GSPGIPGTPGSHGLPGRDGRDGLKGD--------------PGPPGPMGPPG--EMPCPPG 71
G PG PG G G G+ G G KG+ PGP GP GPPG +P P G
Sbjct: 473 GHPGSPGEKGEKGETGQAGSPGEKGEAGEKGNPGAEVPGLPGPEGPPGPPGLQGVPGPKG 532
Query: 72 NDGLPGAPGIPGECGEKGE------------------PGERGPPGLP 100
GL GA G G GEKG+ PG GP G+P
Sbjct: 533 EAGLDGAKGEKGFQGEKGDRGPLGLPGASGLDGRPGPPGTPGPIGVP 579
Score = 56.2 bits (134), Expect = 2e-08
Identities = 31/70 (44%), Positives = 35/70 (50%), Gaps = 10/70 (14%)
Query: 26 CVGSPGIPGTPGSHGLPGRDGRDGLKGDPGPPGPMGPPGEMPCPPGNDGLPGAPGIPGEC 85
C P G PG+ G PG G GL G PG PGP G + GL G PG PG
Sbjct: 117 CNCPPVFQGQPGTRGFPGFPGPIGLDGKPGHPGPKG----------DMGLTGPPGQPGPQ 166
Query: 86 GEKGEPGERG 95
G+KGE G+ G
Sbjct: 167 GQKGEKGQCG 176
Score = 49.3 bits (116), Expect = 3e-06
Identities = 25/56 (44%), Positives = 27/56 (48%), Gaps = 7/56 (12%)
Query: 28 GSPGIPGTPGSHGLPGRDGRDGLKGDPGPPGPMGPPGEM-------PCPPGNDGLP 76
G G G PG HG PG G G +G G GP G G+ PCP G DGLP
Sbjct: 598 GPTGAAGLPGLHGPPGDKGNRGERGKKGSRGPKGDKGDQGAPGLDAPCPLGEDGLP 653
Score = 47.8 bits (112), Expect = 9e-06
Identities = 26/64 (40%), Positives = 33/64 (51%), Gaps = 10/64 (15%)
Query: 35 TPGSHGLPGRDGRDGLKGDPGPPGPMGPPGEMPCPPGNDGLPGAPGIPGECGEKGEPGER 94
+PG + P G+ G +G PG PGP+G DG PG PG G+ G G PG+
Sbjct: 114 SPGCNCPPVFQGQPGTRGFPGFPGPIGL----------DGKPGHPGPKGDMGLTGPPGQP 163
Query: 95 GPPG 98
GP G
Sbjct: 164 GPQG 167
>gi|22027599 alpha 1 type XIII collagen isoform 14 [Homo sapiens]
Length = 664
Score = 87.8 bits (216), Expect = 8e-18
Identities = 45/77 (58%), Positives = 47/77 (61%), Gaps = 7/77 (9%)
Query: 28 GSPGIPGTPGSHGLPGRDGRDGLKGDPGPPGPMGPPGEMPCPPGNDGLPGA------PGI 81
G+PGIPG G GLPG G DG KG G PG MGPPG PPG DG PG PG
Sbjct: 423 GAPGIPGQKGEIGLPGPPGHDGEKGPRGKPGDMGPPGPQG-PPGKDGPPGVKGENGHPGS 481
Query: 82 PGECGEKGEPGERGPPG 98
PGE GEKGE G+ G PG
Sbjct: 482 PGEKGEKGETGQAGSPG 498
Score = 71.6 bits (174), Expect = 6e-13
Identities = 44/98 (44%), Positives = 46/98 (46%), Gaps = 19/98 (19%)
Query: 28 GSPGIPGTPGSHGLPGRDGRDGLKGDPGPPGPMGPPG-----------EMPCPPGNDGLP 76
G PG PG G G PG G G G PGPPGP G PG MP PG G
Sbjct: 220 GPPGPPGPSGPLGHPGLPGPMGPPGLPGPPGPKGDPGIQGYHGRKGERGMPGMPGKHGAK 279
Query: 77 GAPGI--------PGECGEKGEPGERGPPGLPAHLDEE 106
GAPGI PG G KGE G G PGLP L ++
Sbjct: 280 GAPGIAVAGMKGEPGIPGTKGEKGAEGSPGLPGLLGQK 317
Score = 68.9 bits (167), Expect = 4e-12
Identities = 33/74 (44%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
Query: 28 GSPGIPGTPGSHGLPGRDGRDGLKGDPGPPGPMGPPGE--MPCPPGNDGLPGAPGIPGEC 85
G G+PG G GL G G G +G+ G GP+G PG + PG G PG G+PG
Sbjct: 527 GLQGVPGPKGEAGLDGAKGEKGFQGEKGDRGPLGLPGASGLDGRPGPPGTPGPIGVPGPA 586
Query: 86 GEKGEPGERGPPGL 99
G KGE G +G PG+
Sbjct: 587 GPKGERGSKGDPGM 600
Score = 67.8 bits (164), Expect = 8e-12
Identities = 38/89 (42%), Positives = 51/89 (57%), Gaps = 6/89 (6%)
Query: 28 GSPGIPGTPGSHGLP-----GRDGRDGLKGDPGPPGPMGPPGEMPCPPGNDGLPGAPGIP 82
G PG+PG+PG GL G G+ G +G PG PGP+G G+ P PG G G G P
Sbjct: 128 GRPGLPGSPGDAGLSIIGPRGPPGQPGTRGFPGFPGPIGLDGK-PGHPGPKGDMGLTGPP 186
Query: 83 GECGEKGEPGERGPPGLPAHLDEELQATL 111
G+ G +G+ GE+G G H E+ QA++
Sbjct: 187 GQPGPQGQKGEKGQCGEYPHRGEQSQASI 215
Score = 67.8 bits (164), Expect = 8e-12
Identities = 37/84 (44%), Positives = 42/84 (50%), Gaps = 13/84 (15%)
Query: 27 VGSPGIPGTPGSHGLPGRDGRDGLKGDPGPPGPMGPPGEMPCPPGNDGLPGAPGIPGECG 86
+G G PG PG+ G PG G GL G PG PGP G G + PPG G G G G+CG
Sbjct: 144 IGPRGPPGQPGTRGFPGFPGPIGLDGKPGHPGPKGDMG-LTGPPGQPGPQGQKGEKGQCG 202
Query: 87 E------------KGEPGERGPPG 98
E +G PG GPPG
Sbjct: 203 EYPHRGEQSQASIQGPPGPPGPPG 226
Score = 67.8 bits (164), Expect = 8e-12
Identities = 41/98 (41%), Positives = 49/98 (50%), Gaps = 28/98 (28%)
Query: 27 VGSPGIPGTPGSHGLPGRDGRDG------------LKGDPGPPGPMGPPGEMPCPPGNDG 74
+G G PG PG G G G+ G ++G PGPPGP GP G P G+ G
Sbjct: 180 MGLTGPPGQPGPQGQKGEKGQCGEYPHRGEQSQASIQGPPGPPGPPGPSG----PLGHPG 235
Query: 75 LP---GAPGIPGECGEKGEP---------GERGPPGLP 100
LP G PG+PG G KG+P GERG PG+P
Sbjct: 236 LPGPMGPPGLPGPPGPKGDPGIQGYHGRKGERGMPGMP 273
Score = 67.8 bits (164), Expect = 8e-12
Identities = 35/71 (49%), Positives = 39/71 (54%), Gaps = 4/71 (5%)
Query: 28 GSPGIPGTPGSHGLPGRDGRDGLKGDPGPPGPMGPPGEMPCPPGNDGLPGAPGIPGECGE 87
G PG PGTPG G+PG G G +G G PG GP G P GL G PG G GE
Sbjct: 569 GRPGPPGTPGPIGVPGPAGPKGERGSKGDPGMTGPTGAAGLP----GLHGPPGDKGNRGE 624
Query: 88 KGEPGERGPPG 98
+G+ G RGP G
Sbjct: 625 RGKKGSRGPKG 635
Score = 67.0 bits (162), Expect = 1e-11
Identities = 36/74 (48%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Query: 27 VGSPGIPGTPGSHGLPGRDGRDGLKGDPGPPGPMGPPGEMPCPP-GNDGLPGAPGIPGEC 85
+G PG+PG PG G PG G G KG+ G PG G G P G+ G PGIPG
Sbjct: 240 MGPPGLPGPPGPKGDPGIQGYHGRKGERGMPGMPGKHGAKGAPGIAVAGMKGEPGIPGTK 299
Query: 86 GEKGEPGERGPPGL 99
GEKG G G PGL
Sbjct: 300 GEKGAEGSPGLPGL 313
Score = 67.0 bits (162), Expect = 1e-11
Identities = 40/105 (38%), Positives = 45/105 (42%), Gaps = 33/105 (31%)
Query: 27 VGSPGIPGTPGSHGLPGRDGRDGLKGD-------------------------------PG 55
VG PG PG G G G G DG KG PG
Sbjct: 355 VGPPGQPGDKGERGAAGEQGPDGPKGSKGEPGKGEMVDYNGNINEALQEIRTLALMGPPG 414
Query: 56 PPGPMGPPGE--MPCPPGNDGLPGAPGIPGECGEKGEPGERGPPG 98
PG +GPPG +P G GLPG PG GE G +G+PG+ GPPG
Sbjct: 415 LPGQIGPPGAPGIPGQKGEIGLPGPPGHDGEKGPRGKPGDMGPPG 459
Score = 66.6 bits (161), Expect = 2e-11
Identities = 35/71 (49%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Query: 28 GSPGIPGTPGSHGLPGRDGRDGLKGDPGPPGPMGPPGEMPCPPGNDGLPGAPGIPGECGE 87
G G G G GLPG G DG G PG PGP+G PG P G G G PG+ G G
Sbjct: 548 GFQGEKGDRGPLGLPGASGLDGRPGPPGTPGPIGVPGPAG-PKGERGSKGDPGMTGPTGA 606
Query: 88 KGEPGERGPPG 98
G PG GPPG
Sbjct: 607 AGLPGLHGPPG 617
Score = 65.1 bits (157), Expect = 5e-11
Identities = 48/140 (34%), Positives = 59/140 (42%), Gaps = 30/140 (21%)
Query: 28 GSPGIP--GTPGSHGLPGRDGRDGLKGDPGPPGPMGPPGE-------MPCPPGNDGLPGA 78
G+PGI G G G+PG G G +G PG PG +G GE + G G PG
Sbjct: 280 GAPGIAVAGMKGEPGIPGTKGEKGAEGSPGLPGLLGQKGEKGDAGNSIGGGRGEPGPPGL 339
Query: 79 PGIPGECGEKGEPGERGPPGLPAHLDEELQATLHDFRHQILQTRGALSLQGSIMTVGEKV 138
PG PG GE G G+ GPPG P E RGA QG G K
Sbjct: 340 PGPPGPKGEAGVDGQVGPPGQPGDKGE----------------RGAAGEQGPDGPKGSKG 383
Query: 139 FSSNGQSITF-----DAIQE 153
G+ + + +A+QE
Sbjct: 384 EPGKGEMVDYNGNINEALQE 403
Score = 62.4 bits (150), Expect = 3e-10
Identities = 41/113 (36%), Positives = 48/113 (42%), Gaps = 40/113 (35%)
Query: 28 GSPGIPGTPGSHGLPGRDGRDGLKGDPGPPGP------------MGPPGE---------- 65
G PG G PG G PG+DG G+KG+ G PG G PGE
Sbjct: 450 GKPGDMGPPGPQGPPGKDGPPGVKGENGHPGSPGEKGEKGETGQAGSPGEKGEAGEKGNP 509
Query: 66 ------MPCPPGNDGLPGAPGIPGECGE------------KGEPGERGPPGLP 100
+P P G G PG G+PG GE +GE G+RGP GLP
Sbjct: 510 GAEVPGLPGPEGPPGPPGLQGVPGPKGEAGLDGAKGEKGFQGEKGDRGPLGLP 562
Score = 60.8 bits (146), Expect = 1e-09
Identities = 43/121 (35%), Positives = 48/121 (39%), Gaps = 45/121 (37%)
Query: 28 GSPGIPGTPGSHGLPGRDGRDGLKGDP------------GPPGPMGPPGE---------- 65
G PG+PG PG G G DG+ G G P GP GP G GE
Sbjct: 335 GPPGLPGPPGPKGEAGVDGQVGPPGQPGDKGERGAAGEQGPDGPKGSKGEPGKGEMVDYN 394
Query: 66 -----------------MPCPPGNDGLPGAPGIPGECGEKGEP------GERGPPGLPAH 102
P PG G PGAPGIPG+ GE G P GE+GP G P
Sbjct: 395 GNINEALQEIRTLALMGPPGLPGQIGPPGAPGIPGQKGEIGLPGPPGHDGEKGPRGKPGD 454
Query: 103 L 103
+
Sbjct: 455 M 455
Score = 58.5 bits (140), Expect = 5e-09
Identities = 35/80 (43%), Positives = 38/80 (47%), Gaps = 10/80 (12%)
Query: 29 SPGIPGTPGSHGLPGRDGRDGLKGDPGPP--GPMGPPGE--------MPCPPGNDGLPGA 78
SPG P G GR G G GD G GP GPPG+ P P G DG PG
Sbjct: 114 SPGCNCPPAFQGPTGRPGLPGSPGDAGLSIIGPRGPPGQPGTRGFPGFPGPIGLDGKPGH 173
Query: 79 PGIPGECGEKGEPGERGPPG 98
PG G+ G G PG+ GP G
Sbjct: 174 PGPKGDMGLTGPPGQPGPQG 193
Score = 58.2 bits (139), Expect = 7e-09
Identities = 40/107 (37%), Positives = 45/107 (42%), Gaps = 34/107 (31%)
Query: 28 GSPGIPGTPGSHGLPGRDGRDGLKGD--------------PGPPGPMGPPG--EMPCPPG 71
G PG PG G G G+ G G KG+ PGP GP GPPG +P P G
Sbjct: 477 GHPGSPGEKGEKGETGQAGSPGEKGEAGEKGNPGAEVPGLPGPEGPPGPPGLQGVPGPKG 536
Query: 72 NDGLPGAPGIPGECGEKGE------------------PGERGPPGLP 100
GL GA G G GEKG+ PG GP G+P
Sbjct: 537 EAGLDGAKGEKGFQGEKGDRGPLGLPGASGLDGRPGPPGTPGPIGVP 583
Score = 49.3 bits (116), Expect = 3e-06
Identities = 25/56 (44%), Positives = 27/56 (48%), Gaps = 7/56 (12%)
Query: 28 GSPGIPGTPGSHGLPGRDGRDGLKGDPGPPGPMGPPGEM-------PCPPGNDGLP 76
G G G PG HG PG G G +G G GP G G+ PCP G DGLP
Sbjct: 602 GPTGAAGLPGLHGPPGDKGNRGERGKKGSRGPKGDKGDQGAPGLDAPCPLGEDGLP 657
Score = 39.3 bits (90), Expect = 0.003
Identities = 21/44 (47%), Positives = 23/44 (52%), Gaps = 3/44 (6%)
Query: 59 PMGPPGEMPCPPGNDGLPGAPGIPGECGEKGEP--GERGPPGLP 100
P PG CPP G G PG+PG G+ G G RGPPG P
Sbjct: 111 PKTSPG-CNCPPAFQGPTGRPGLPGSPGDAGLSIIGPRGPPGQP 153
>gi|22027595 alpha 1 type XIII collagen isoform 12 [Homo sapiens]
Length = 691
Score = 87.8 bits (216), Expect = 8e-18
Identities = 45/77 (58%), Positives = 47/77 (61%), Gaps = 7/77 (9%)
Query: 28 GSPGIPGTPGSHGLPGRDGRDGLKGDPGPPGPMGPPGEMPCPPGNDGLPGA------PGI 81
G+PGIPG G GLPG G DG KG G PG MGPPG PPG DG PG PG
Sbjct: 476 GAPGIPGQKGEIGLPGPPGHDGEKGPRGKPGDMGPPGPQG-PPGKDGPPGVKGENGHPGS 534
Query: 82 PGECGEKGEPGERGPPG 98
PGE GEKGE G+ G PG
Sbjct: 535 PGEKGEKGETGQAGSPG 551
Score = 71.6 bits (174), Expect = 6e-13
Identities = 44/98 (44%), Positives = 46/98 (46%), Gaps = 19/98 (19%)
Query: 28 GSPGIPGTPGSHGLPGRDGRDGLKGDPGPPGPMGPPG-----------EMPCPPGNDGLP 76
G PG PG G G PG G G G PGPPGP G PG MP PG G
Sbjct: 273 GPPGPPGPSGPLGHPGLPGPMGPPGLPGPPGPKGDPGIQGYHGRKGERGMPGMPGKHGAK 332
Query: 77 GAPGI--------PGECGEKGEPGERGPPGLPAHLDEE 106
GAPGI PG G KGE G G PGLP L ++
Sbjct: 333 GAPGIAVAGMKGEPGIPGTKGEKGAEGSPGLPGLLGQK 370
Score = 68.2 bits (165), Expect = 6e-12
Identities = 37/79 (46%), Positives = 43/79 (54%), Gaps = 9/79 (11%)
Query: 28 GSPGIPGTPGSHGLPGRDGRDG--------LKGDPGPPGPMGPPGEMPCPPGNDGLPGAP 79
G PG+PG G+ G+PGR G G +G PG PG G PG P P G DG PG P
Sbjct: 128 GRPGLPGDKGAIGMPGRVGSPGDAGLSIIGPRGPPGQPGTRGFPG-FPGPIGLDGKPGHP 186
Query: 80 GIPGECGEKGEPGERGPPG 98
G G+ G G PG+ GP G
Sbjct: 187 GPKGDMGLTGPPGQPGPQG 205
Score = 67.0 bits (162), Expect = 1e-11
Identities = 36/74 (48%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Query: 27 VGSPGIPGTPGSHGLPGRDGRDGLKGDPGPPGPMGPPGEMPCPP-GNDGLPGAPGIPGEC 85
+G PG+PG PG G PG G G KG+ G PG G G P G+ G PGIPG
Sbjct: 293 MGPPGLPGPPGPKGDPGIQGYHGRKGERGMPGMPGKHGAKGAPGIAVAGMKGEPGIPGTK 352
Query: 86 GEKGEPGERGPPGL 99
GEKG G G PGL
Sbjct: 353 GEKGAEGSPGLPGL 366
Score = 67.0 bits (162), Expect = 1e-11
Identities = 40/105 (38%), Positives = 45/105 (42%), Gaps = 33/105 (31%)
Query: 27 VGSPGIPGTPGSHGLPGRDGRDGLKGD-------------------------------PG 55
VG PG PG G G G G DG KG PG
Sbjct: 408 VGPPGQPGDKGERGAAGEQGPDGPKGSKGEPGKGEMVDYNGNINEALQEIRTLALMGPPG 467
Query: 56 PPGPMGPPGE--MPCPPGNDGLPGAPGIPGECGEKGEPGERGPPG 98
PG +GPPG +P G GLPG PG GE G +G+PG+ GPPG
Sbjct: 468 LPGQIGPPGAPGIPGQKGEIGLPGPPGHDGEKGPRGKPGDMGPPG 512
Score = 66.2 bits (160), Expect = 2e-11
Identities = 33/71 (46%), Positives = 39/71 (54%), Gaps = 4/71 (5%)
Query: 28 GSPGIPGTPGSHGLPGRDGRDGLKGDPGPPGPMGPPGEMPCPPGNDGLPGAPGIPGECGE 87
G G+PG G GL G G G +G+ G GP+G PG PG G+PG G GE G
Sbjct: 566 GLQGVPGPKGEAGLDGAKGEKGFQGEKGDRGPLGLPG----TPGPIGVPGPAGPKGERGS 621
Query: 88 KGEPGERGPPG 98
KG+PG GP G
Sbjct: 622 KGDPGMTGPTG 632
Score = 65.9 bits (159), Expect = 3e-11
Identities = 37/79 (46%), Positives = 44/79 (55%), Gaps = 5/79 (6%)
Query: 28 GSPGIPGTPGSHGLPGR---DGRDGLKGDPGPPGPMGPPG--EMPCPPGNDGLPGAPGIP 82
G G+PGTPG G+PG G G KGDPG GP G G + PPG+ G G G
Sbjct: 596 GPLGLPGTPGPIGVPGPAGPKGERGSKGDPGMTGPTGAAGLPGLHGPPGDKGNRGERGKK 655
Query: 83 GECGEKGEPGERGPPGLPA 101
G G KG+ G++G PGL A
Sbjct: 656 GSRGPKGDKGDQGAPGLDA 674
Score = 65.1 bits (157), Expect = 5e-11
Identities = 48/140 (34%), Positives = 59/140 (42%), Gaps = 30/140 (21%)
Query: 28 GSPGIP--GTPGSHGLPGRDGRDGLKGDPGPPGPMGPPGE-------MPCPPGNDGLPGA 78
G+PGI G G G+PG G G +G PG PG +G GE + G G PG
Sbjct: 333 GAPGIAVAGMKGEPGIPGTKGEKGAEGSPGLPGLLGQKGEKGDAGNSIGGGRGEPGPPGL 392
Query: 79 PGIPGECGEKGEPGERGPPGLPAHLDEELQATLHDFRHQILQTRGALSLQGSIMTVGEKV 138
PG PG GE G G+ GPPG P E RGA QG G K
Sbjct: 393 PGPPGPKGEAGVDGQVGPPGQPGDKGE----------------RGAAGEQGPDGPKGSKG 436
Query: 139 FSSNGQSITF-----DAIQE 153
G+ + + +A+QE
Sbjct: 437 EPGKGEMVDYNGNINEALQE 456
Score = 64.3 bits (155), Expect = 9e-11
Identities = 39/89 (43%), Positives = 41/89 (46%), Gaps = 12/89 (13%)
Query: 20 CEVKDVCVGSPGIPGTPGSHGLPGRDGRDGLKGDPGPP--GPMGPPGEMPCPPGNDGLPG 77
C G G PG PG G G GR G GD G GP GPPG+ PG G PG
Sbjct: 117 CNCPPAFQGPTGRPGLPGDKGAIGMPGRVGSPGDAGLSIIGPRGPPGQ----PGTRGFPG 172
Query: 78 AP------GIPGECGEKGEPGERGPPGLP 100
P G PG G KG+ G GPPG P
Sbjct: 173 FPGPIGLDGKPGHPGPKGDMGLTGPPGQP 201
Score = 62.8 bits (151), Expect = 3e-10
Identities = 42/99 (42%), Positives = 47/99 (47%), Gaps = 26/99 (26%)
Query: 28 GSPGIPGTPGSHGLPGRDGRDGLKGDPGPPGP------------MGPPGEM-----PCPP 70
G PG G PG G PG+DG G+KG+ G PG G PGE P
Sbjct: 503 GKPGDMGPPGPQGPPGKDGPPGVKGENGHPGSPGEKGEKGETGQAGSPGEKGEAGEKGNP 562
Query: 71 GNDGLPGAPGIPGEC------GEK---GEPGERGPPGLP 100
G +GL G PG GE GEK GE G+RGP GLP
Sbjct: 563 GAEGLQGVPGPKGEAGLDGAKGEKGFQGEKGDRGPLGLP 601
Score = 60.8 bits (146), Expect = 1e-09
Identities = 43/121 (35%), Positives = 48/121 (39%), Gaps = 45/121 (37%)
Query: 28 GSPGIPGTPGSHGLPGRDGRDGLKGDP------------GPPGPMGPPGE---------- 65
G PG+PG PG G G DG+ G G P GP GP G GE
Sbjct: 388 GPPGLPGPPGPKGEAGVDGQVGPPGQPGDKGERGAAGEQGPDGPKGSKGEPGKGEMVDYN 447
Query: 66 -----------------MPCPPGNDGLPGAPGIPGECGEKGEP------GERGPPGLPAH 102
P PG G PGAPGIPG+ GE G P GE+GP G P
Sbjct: 448 GNINEALQEIRTLALMGPPGLPGQIGPPGAPGIPGQKGEIGLPGPPGHDGEKGPRGKPGD 507
Query: 103 L 103
+
Sbjct: 508 M 508
Score = 60.5 bits (145), Expect = 1e-09
Identities = 30/61 (49%), Positives = 34/61 (55%), Gaps = 1/61 (1%)
Query: 27 VGSPGIPGTPGSHGLPGRDGRDGLKGDPGPPGPMGPPGEMPCPPGNDGLPGAPGIPGECG 86
+G G PG PG+ G PG G GL G PG PGP G G + PPG G G G G+CG
Sbjct: 156 IGPRGPPGQPGTRGFPGFPGPIGLDGKPGHPGPKGDMG-LTGPPGQPGPQGQKGEKGQCG 214
Query: 87 E 87
E
Sbjct: 215 E 215
Score = 59.7 bits (143), Expect = 2e-09
Identities = 32/70 (45%), Positives = 39/70 (55%), Gaps = 16/70 (22%)
Query: 43 GRDGRDGLKGDPGPPGPMGPPGEMPCPPGNDGLP---GAPGIPGECGEKGEP-------- 91
G + ++G PGPPGP GP G P G+ GLP G PG+PG G KG+P
Sbjct: 261 GEQSQASIQGPPGPPGPPGPSG----PLGHPGLPGPMGPPGLPGPPGPKGDPGIQGYHGR 316
Query: 92 -GERGPPGLP 100
GERG PG+P
Sbjct: 317 KGERGMPGMP 326
Score = 58.5 bits (140), Expect = 5e-09
Identities = 33/77 (42%), Positives = 36/77 (46%), Gaps = 7/77 (9%)
Query: 29 SPGIPGTPGSHGLPGRDGRDGLKGDPGPPGPMGPPGEMPC-------PPGNDGLPGAPGI 81
SPG P G GR G G KG G PG +G PG+ PPG G G PG
Sbjct: 114 SPGCNCPPAFQGPTGRPGLPGDKGAIGMPGRVGSPGDAGLSIIGPRGPPGQPGTRGFPGF 173
Query: 82 PGECGEKGEPGERGPPG 98
PG G G+PG GP G
Sbjct: 174 PGPIGLDGKPGHPGPKG 190
Score = 48.9 bits (115), Expect = 4e-06
Identities = 41/134 (30%), Positives = 44/134 (32%), Gaps = 61/134 (45%)
Query: 28 GSPGIPGTPGSHGLPGRDGRDGLKGD---------PGPPGPMGPPGE------------M 66
G+ G PG PG GL G+ G G KGD PGP G G G+ M
Sbjct: 166 GTRGFPGFPGPIGLDGKPGHPGPKGDMGLTGPPGQPGPQGQKGEKGQCGEYPHRECLSSM 225
Query: 67 P----------------------CPP------------------GNDGLPGAPGIPGECG 86
P PP G G PG PG G G
Sbjct: 226 PAALRSSQIIALKLLPLLNSVRLAPPPVIKRRTFQGEQSQASIQGPPGPPGPPGPSGPLG 285
Query: 87 EKGEPGERGPPGLP 100
G PG GPPGLP
Sbjct: 286 HPGLPGPMGPPGLP 299
Score = 43.5 bits (101), Expect = 2e-04
Identities = 23/49 (46%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
Query: 28 GSPGIPGTPGSHGLPGRDGRDGLKGDPGPPGPMGPPGEMPCPPGNDGLP 76
G G PG G+ G G+ G G KGD G G P + PCP G DGLP
Sbjct: 638 GLHGPPGDKGNRGERGKKGSRGPKGDKGDQG--APGLDAPCPLGEDGLP 684
Score = 38.9 bits (89), Expect = 0.004
Identities = 19/40 (47%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Query: 59 PMGPPGEMPCPPGNDGLPGAPGIPGECGEKGEPGERGPPG 98
P PG CPP G G PG+PG+ G G PG G PG
Sbjct: 111 PKTSPG-CNCPPAFQGPTGRPGLPGDKGAIGMPGRVGSPG 149
>gi|22027593 alpha 1 type XIII collagen isoform 11 [Homo sapiens]
Length = 686
Score = 87.8 bits (216), Expect = 8e-18
Identities = 45/77 (58%), Positives = 47/77 (61%), Gaps = 7/77 (9%)
Query: 28 GSPGIPGTPGSHGLPGRDGRDGLKGDPGPPGPMGPPGEMPCPPGNDGLPGA------PGI 81
G+PGIPG G GLPG G DG KG G PG MGPPG PPG DG PG PG
Sbjct: 457 GAPGIPGQKGEIGLPGPPGHDGEKGPRGKPGDMGPPGPQG-PPGKDGPPGVKGENGHPGS 515
Query: 82 PGECGEKGEPGERGPPG 98
PGE GEKGE G+ G PG
Sbjct: 516 PGEKGEKGETGQAGSPG 532
Score = 71.6 bits (174), Expect = 6e-13
Identities = 44/98 (44%), Positives = 46/98 (46%), Gaps = 19/98 (19%)
Query: 28 GSPGIPGTPGSHGLPGRDGRDGLKGDPGPPGPMGPPG-----------EMPCPPGNDGLP 76
G PG PG G G PG G G G PGPPGP G PG MP PG G
Sbjct: 254 GPPGPPGPSGPLGHPGLPGPMGPPGLPGPPGPKGDPGIQGYHGRKGERGMPGMPGKHGAK 313
Query: 77 GAPGI--------PGECGEKGEPGERGPPGLPAHLDEE 106
GAPGI PG G KGE G G PGLP L ++
Sbjct: 314 GAPGIAVAGMKGEPGIPGTKGEKGAEGSPGLPGLLGQK 351
Score = 68.2 bits (165), Expect = 6e-12
Identities = 37/79 (46%), Positives = 43/79 (54%), Gaps = 9/79 (11%)
Query: 28 GSPGIPGTPGSHGLPGRDGRDG--------LKGDPGPPGPMGPPGEMPCPPGNDGLPGAP 79
G PG+PG G+ G+PGR G G +G PG PG G PG P P G DG PG P
Sbjct: 128 GRPGLPGDKGAIGMPGRVGSPGDAGLSIIGPRGPPGQPGTRGFPG-FPGPIGLDGKPGHP 186
Query: 80 GIPGECGEKGEPGERGPPG 98
G G+ G G PG+ GP G
Sbjct: 187 GPKGDMGLTGPPGQPGPQG 205
Score = 67.0 bits (162), Expect = 1e-11
Identities = 36/74 (48%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Query: 27 VGSPGIPGTPGSHGLPGRDGRDGLKGDPGPPGPMGPPGEMPCPP-GNDGLPGAPGIPGEC 85
+G PG+PG PG G PG G G KG+ G PG G G P G+ G PGIPG
Sbjct: 274 MGPPGLPGPPGPKGDPGIQGYHGRKGERGMPGMPGKHGAKGAPGIAVAGMKGEPGIPGTK 333
Query: 86 GEKGEPGERGPPGL 99
GEKG G G PGL
Sbjct: 334 GEKGAEGSPGLPGL 347
Score = 67.0 bits (162), Expect = 1e-11
Identities = 40/105 (38%), Positives = 45/105 (42%), Gaps = 33/105 (31%)
Query: 27 VGSPGIPGTPGSHGLPGRDGRDGLKGD-------------------------------PG 55
VG PG PG G G G G DG KG PG
Sbjct: 389 VGPPGQPGDKGERGAAGEQGPDGPKGSKGEPGKGEMVDYNGNINEALQEIRTLALMGPPG 448
Query: 56 PPGPMGPPGE--MPCPPGNDGLPGAPGIPGECGEKGEPGERGPPG 98
PG +GPPG +P G GLPG PG GE G +G+PG+ GPPG
Sbjct: 449 LPGQIGPPGAPGIPGQKGEIGLPGPPGHDGEKGPRGKPGDMGPPG 493
Score = 66.2 bits (160), Expect = 2e-11
Identities = 33/71 (46%), Positives = 39/71 (54%), Gaps = 4/71 (5%)
Query: 28 GSPGIPGTPGSHGLPGRDGRDGLKGDPGPPGPMGPPGEMPCPPGNDGLPGAPGIPGECGE 87
G G+PG G GL G G G +G+ G GP+G PG PG G+PG G GE G
Sbjct: 561 GLQGVPGPKGEAGLDGAKGEKGFQGEKGDRGPLGLPG----TPGPIGVPGPAGPKGERGS 616
Query: 88 KGEPGERGPPG 98
KG+PG GP G
Sbjct: 617 KGDPGMTGPTG 627
Score = 65.9 bits (159), Expect = 3e-11
Identities = 37/79 (46%), Positives = 44/79 (55%), Gaps = 5/79 (6%)
Query: 28 GSPGIPGTPGSHGLPGR---DGRDGLKGDPGPPGPMGPPG--EMPCPPGNDGLPGAPGIP 82
G G+PGTPG G+PG G G KGDPG GP G G + PPG+ G G G
Sbjct: 591 GPLGLPGTPGPIGVPGPAGPKGERGSKGDPGMTGPTGAAGLPGLHGPPGDKGNRGERGKK 650
Query: 83 GECGEKGEPGERGPPGLPA 101
G G KG+ G++G PGL A
Sbjct: 651 GSRGPKGDKGDQGAPGLDA 669
Score = 65.1 bits (157), Expect = 5e-11
Identities = 48/140 (34%), Positives = 59/140 (42%), Gaps = 30/140 (21%)
Query: 28 GSPGIP--GTPGSHGLPGRDGRDGLKGDPGPPGPMGPPGE-------MPCPPGNDGLPGA 78
G+PGI G G G+PG G G +G PG PG +G GE + G G PG
Sbjct: 314 GAPGIAVAGMKGEPGIPGTKGEKGAEGSPGLPGLLGQKGEKGDAGNSIGGGRGEPGPPGL 373
Query: 79 PGIPGECGEKGEPGERGPPGLPAHLDEELQATLHDFRHQILQTRGALSLQGSIMTVGEKV 138
PG PG GE G G+ GPPG P E RGA QG G K
Sbjct: 374 PGPPGPKGEAGVDGQVGPPGQPGDKGE----------------RGAAGEQGPDGPKGSKG 417
Query: 139 FSSNGQSITF-----DAIQE 153
G+ + + +A+QE
Sbjct: 418 EPGKGEMVDYNGNINEALQE 437
Score = 65.1 bits (157), Expect = 5e-11
Identities = 39/89 (43%), Positives = 43/89 (48%), Gaps = 16/89 (17%)
Query: 28 GSPGIPGTPGSHGLPGRDGRDGLKGD--------------PGPPGPMGPPG--EMPCPPG 71
G PG PG G G G+ G G KG+ PGP GP GPPG +P P G
Sbjct: 511 GHPGSPGEKGEKGETGQAGSPGEKGEAGEKGNPGAEVPGLPGPEGPPGPPGLQGVPGPKG 570
Query: 72 NDGLPGAPGIPGECGEKGEPGERGPPGLP 100
GL GA G G GEKG+ G G PG P
Sbjct: 571 EAGLDGAKGEKGFQGEKGDRGPLGLPGTP 599
Score = 64.3 bits (155), Expect = 9e-11
Identities = 39/89 (43%), Positives = 41/89 (46%), Gaps = 12/89 (13%)
Query: 20 CEVKDVCVGSPGIPGTPGSHGLPGRDGRDGLKGDPGPP--GPMGPPGEMPCPPGNDGLPG 77
C G G PG PG G G GR G GD G GP GPPG+ PG G PG
Sbjct: 117 CNCPPAFQGPTGRPGLPGDKGAIGMPGRVGSPGDAGLSIIGPRGPPGQ----PGTRGFPG 172
Query: 78 AP------GIPGECGEKGEPGERGPPGLP 100
P G PG G KG+ G GPPG P
Sbjct: 173 FPGPIGLDGKPGHPGPKGDMGLTGPPGQP 201
Score = 62.4 bits (150), Expect = 3e-10
Identities = 41/113 (36%), Positives = 48/113 (42%), Gaps = 40/113 (35%)
Query: 28 GSPGIPGTPGSHGLPGRDGRDGLKGDPGPPGP------------MGPPGE---------- 65
G PG G PG G PG+DG G+KG+ G PG G PGE
Sbjct: 484 GKPGDMGPPGPQGPPGKDGPPGVKGENGHPGSPGEKGEKGETGQAGSPGEKGEAGEKGNP 543
Query: 66 ------MPCPPGNDGLPGAPGIPGECGE------------KGEPGERGPPGLP 100
+P P G G PG G+PG GE +GE G+RGP GLP
Sbjct: 544 GAEVPGLPGPEGPPGPPGLQGVPGPKGEAGLDGAKGEKGFQGEKGDRGPLGLP 596
Score = 60.8 bits (146), Expect = 1e-09
Identities = 43/121 (35%), Positives = 48/121 (39%), Gaps = 45/121 (37%)
Query: 28 GSPGIPGTPGSHGLPGRDGRDGLKGDP------------GPPGPMGPPGE---------- 65
G PG+PG PG G G DG+ G G P GP GP G GE
Sbjct: 369 GPPGLPGPPGPKGEAGVDGQVGPPGQPGDKGERGAAGEQGPDGPKGSKGEPGKGEMVDYN 428
Query: 66 -----------------MPCPPGNDGLPGAPGIPGECGEKGEP------GERGPPGLPAH 102
P PG G PGAPGIPG+ GE G P GE+GP G P
Sbjct: 429 GNINEALQEIRTLALMGPPGLPGQIGPPGAPGIPGQKGEIGLPGPPGHDGEKGPRGKPGD 488
Query: 103 L 103
+
Sbjct: 489 M 489
Score = 60.5 bits (145), Expect = 1e-09
Identities = 30/61 (49%), Positives = 34/61 (55%), Gaps = 1/61 (1%)
Query: 27 VGSPGIPGTPGSHGLPGRDGRDGLKGDPGPPGPMGPPGEMPCPPGNDGLPGAPGIPGECG 86
+G G PG PG+ G PG G GL G PG PGP G G + PPG G G G G+CG
Sbjct: 156 IGPRGPPGQPGTRGFPGFPGPIGLDGKPGHPGPKGDMG-LTGPPGQPGPQGQKGEKGQCG 214
Query: 87 E 87
E
Sbjct: 215 E 215
Score = 59.7 bits (143), Expect = 2e-09
Identities = 32/70 (45%), Positives = 39/70 (55%), Gaps = 16/70 (22%)
Query: 43 GRDGRDGLKGDPGPPGPMGPPGEMPCPPGNDGLP---GAPGIPGECGEKGEP-------- 91
G + ++G PGPPGP GP G P G+ GLP G PG+PG G KG+P
Sbjct: 242 GEQSQASIQGPPGPPGPPGPSG----PLGHPGLPGPMGPPGLPGPPGPKGDPGIQGYHGR 297
Query: 92 -GERGPPGLP 100
GERG PG+P
Sbjct: 298 KGERGMPGMP 307
Score = 58.5 bits (140), Expect = 5e-09
Identities = 33/77 (42%), Positives = 36/77 (46%), Gaps = 7/77 (9%)
Query: 29 SPGIPGTPGSHGLPGRDGRDGLKGDPGPPGPMGPPGEMPC-------PPGNDGLPGAPGI 81
SPG P G GR G G KG G PG +G PG+ PPG G G PG
Sbjct: 114 SPGCNCPPAFQGPTGRPGLPGDKGAIGMPGRVGSPGDAGLSIIGPRGPPGQPGTRGFPGF 173
Query: 82 PGECGEKGEPGERGPPG 98
PG G G+PG GP G
Sbjct: 174 PGPIGLDGKPGHPGPKG 190
Score = 43.5 bits (101), Expect = 2e-04
Identities = 23/49 (46%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
Query: 28 GSPGIPGTPGSHGLPGRDGRDGLKGDPGPPGPMGPPGEMPCPPGNDGLP 76
G G PG G+ G G+ G G KGD G G P + PCP G DGLP
Sbjct: 633 GLHGPPGDKGNRGERGKKGSRGPKGDKGDQG--APGLDAPCPLGEDGLP 679
Score = 38.9 bits (89), Expect = 0.004
Identities = 19/40 (47%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Query: 59 PMGPPGEMPCPPGNDGLPGAPGIPGECGEKGEPGERGPPG 98
P PG CPP G G PG+PG+ G G PG G PG
Sbjct: 111 PKTSPG-CNCPPAFQGPTGRPGLPGDKGAIGMPGRVGSPG 149
>gi|22027591 alpha 1 type XIII collagen isoform 10 [Homo sapiens]
Length = 676
Score = 87.8 bits (216), Expect = 8e-18
Identities = 45/77 (58%), Positives = 47/77 (61%), Gaps = 7/77 (9%)
Query: 28 GSPGIPGTPGSHGLPGRDGRDGLKGDPGPPGPMGPPGEMPCPPGNDGLPGA------PGI 81
G+PGIPG G GLPG G DG KG G PG MGPPG PPG DG PG PG
Sbjct: 435 GAPGIPGQKGEIGLPGPPGHDGEKGPRGKPGDMGPPGPQG-PPGKDGPPGVKGENGHPGS 493
Query: 82 PGECGEKGEPGERGPPG 98
PGE GEKGE G+ G PG
Sbjct: 494 PGEKGEKGETGQAGSPG 510
Score = 71.6 bits (174), Expect = 6e-13
Identities = 44/98 (44%), Positives = 46/98 (46%), Gaps = 19/98 (19%)
Query: 28 GSPGIPGTPGSHGLPGRDGRDGLKGDPGPPGPMGPPG-----------EMPCPPGNDGLP 76
G PG PG G G PG G G G PGPPGP G PG MP PG G
Sbjct: 232 GPPGPPGPSGPLGHPGLPGPMGPPGLPGPPGPKGDPGIQGYHGRKGERGMPGMPGKHGAK 291
Query: 77 GAPGI--------PGECGEKGEPGERGPPGLPAHLDEE 106
GAPGI PG G KGE G G PGLP L ++
Sbjct: 292 GAPGIAVAGMKGEPGIPGTKGEKGAEGSPGLPGLLGQK 329
Score = 68.9 bits (167), Expect = 4e-12
Identities = 33/74 (44%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
Query: 28 GSPGIPGTPGSHGLPGRDGRDGLKGDPGPPGPMGPPGE--MPCPPGNDGLPGAPGIPGEC 85
G G+PG G GL G G G +G+ G GP+G PG + PG G PG G+PG
Sbjct: 539 GLQGVPGPKGEAGLDGAKGEKGFQGEKGDRGPLGLPGASGLDGRPGPPGTPGPIGVPGPA 598
Query: 86 GEKGEPGERGPPGL 99
G KGE G +G PG+
Sbjct: 599 GPKGERGSKGDPGM 612
Score = 67.8 bits (164), Expect = 8e-12
Identities = 37/84 (44%), Positives = 42/84 (50%), Gaps = 13/84 (15%)
Query: 27 VGSPGIPGTPGSHGLPGRDGRDGLKGDPGPPGPMGPPGEMPCPPGNDGLPGAPGIPGECG 86
+G G PG PG+ G PG G GL G PG PGP G G + PPG G G G G+CG
Sbjct: 156 IGPRGPPGQPGTRGFPGFPGPIGLDGKPGHPGPKGDMG-LTGPPGQPGPQGQKGEKGQCG 214
Query: 87 E------------KGEPGERGPPG 98
E +G PG GPPG
Sbjct: 215 EYPHRGEQSQASIQGPPGPPGPPG 238
Score = 67.8 bits (164), Expect = 8e-12
Identities = 41/98 (41%), Positives = 49/98 (50%), Gaps = 28/98 (28%)
Query: 27 VGSPGIPGTPGSHGLPGRDGRDG------------LKGDPGPPGPMGPPGEMPCPPGNDG 74
+G G PG PG G G G+ G ++G PGPPGP GP G P G+ G
Sbjct: 192 MGLTGPPGQPGPQGQKGEKGQCGEYPHRGEQSQASIQGPPGPPGPPGPSG----PLGHPG 247
Query: 75 LP---GAPGIPGECGEKGEP---------GERGPPGLP 100
LP G PG+PG G KG+P GERG PG+P
Sbjct: 248 LPGPMGPPGLPGPPGPKGDPGIQGYHGRKGERGMPGMP 285
Score = 67.8 bits (164), Expect = 8e-12
Identities = 35/71 (49%), Positives = 39/71 (54%), Gaps = 4/71 (5%)
Query: 28 GSPGIPGTPGSHGLPGRDGRDGLKGDPGPPGPMGPPGEMPCPPGNDGLPGAPGIPGECGE 87
G PG PGTPG G+PG G G +G G PG GP G P GL G PG G GE
Sbjct: 581 GRPGPPGTPGPIGVPGPAGPKGERGSKGDPGMTGPTGAAGLP----GLHGPPGDKGNRGE 636
Query: 88 KGEPGERGPPG 98
+G+ G RGP G
Sbjct: 637 RGKKGSRGPKG 647
Score = 67.0 bits (162), Expect = 1e-11
Identities = 41/101 (40%), Positives = 52/101 (51%), Gaps = 18/101 (17%)
Query: 28 GSPGIPGTPGSHGLPGRDGRDG--------LKGDPGPPGPMGPPGEMPCPPGNDGLPGAP 79
G PG+PG G+ G+PGR G G +G PG PG G PG P P G DG PG P
Sbjct: 128 GRPGLPGDKGAIGMPGRVGSPGDAGLSIIGPRGPPGQPGTRGFPG-FPGPIGLDGKPGHP 186
Query: 80 GI---------PGECGEKGEPGERGPPGLPAHLDEELQATL 111
G PG+ G +G+ GE+G G H E+ QA++
Sbjct: 187 GPKGDMGLTGPPGQPGPQGQKGEKGQCGEYPHRGEQSQASI 227
Score = 67.0 bits (162), Expect = 1e-11
Identities = 36/74 (48%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Query: 27 VGSPGIPGTPGSHGLPGRDGRDGLKGDPGPPGPMGPPGEMPCPP-GNDGLPGAPGIPGEC 85
+G PG+PG PG G PG G G KG+ G PG G G P G+ G PGIPG
Sbjct: 252 MGPPGLPGPPGPKGDPGIQGYHGRKGERGMPGMPGKHGAKGAPGIAVAGMKGEPGIPGTK 311
Query: 86 GEKGEPGERGPPGL 99
GEKG G G PGL
Sbjct: 312 GEKGAEGSPGLPGL 325
Score = 67.0 bits (162), Expect = 1e-11
Identities = 40/105 (38%), Positives = 45/105 (42%), Gaps = 33/105 (31%)
Query: 27 VGSPGIPGTPGSHGLPGRDGRDGLKGD-------------------------------PG 55
VG PG PG G G G G DG KG PG
Sbjct: 367 VGPPGQPGDKGERGAAGEQGPDGPKGSKGEPGKGEMVDYNGNINEALQEIRTLALMGPPG 426
Query: 56 PPGPMGPPGE--MPCPPGNDGLPGAPGIPGECGEKGEPGERGPPG 98
PG +GPPG +P G GLPG PG GE G +G+PG+ GPPG
Sbjct: 427 LPGQIGPPGAPGIPGQKGEIGLPGPPGHDGEKGPRGKPGDMGPPG 471
Score = 66.6 bits (161), Expect = 2e-11
Identities = 35/71 (49%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Query: 28 GSPGIPGTPGSHGLPGRDGRDGLKGDPGPPGPMGPPGEMPCPPGNDGLPGAPGIPGECGE 87
G G G G GLPG G DG G PG PGP+G PG P G G G PG+ G G
Sbjct: 560 GFQGEKGDRGPLGLPGASGLDGRPGPPGTPGPIGVPGPAG-PKGERGSKGDPGMTGPTGA 618
Query: 88 KGEPGERGPPG 98
G PG GPPG
Sbjct: 619 AGLPGLHGPPG 629
Score = 65.1 bits (157), Expect = 5e-11
Identities = 38/89 (42%), Positives = 41/89 (46%), Gaps = 10/89 (11%)
Query: 20 CEVKDVCVGSPGIPGTPGSHGLPGRDGRDGLKGDPGPP--GPMGPPGE--------MPCP 69
C G G PG PG G G GR G GD G GP GPPG+ P P
Sbjct: 117 CNCPPAFQGPTGRPGLPGDKGAIGMPGRVGSPGDAGLSIIGPRGPPGQPGTRGFPGFPGP 176
Query: 70 PGNDGLPGAPGIPGECGEKGEPGERGPPG 98
G DG PG PG G+ G G PG+ GP G
Sbjct: 177 IGLDGKPGHPGPKGDMGLTGPPGQPGPQG 205
Score = 65.1 bits (157), Expect = 5e-11
Identities = 48/140 (34%), Positives = 59/140 (42%), Gaps = 30/140 (21%)
Query: 28 GSPGIP--GTPGSHGLPGRDGRDGLKGDPGPPGPMGPPGE-------MPCPPGNDGLPGA 78
G+PGI G G G+PG G G +G PG PG +G GE + G G PG
Sbjct: 292 GAPGIAVAGMKGEPGIPGTKGEKGAEGSPGLPGLLGQKGEKGDAGNSIGGGRGEPGPPGL 351
Query: 79 PGIPGECGEKGEPGERGPPGLPAHLDEELQATLHDFRHQILQTRGALSLQGSIMTVGEKV 138
PG PG GE G G+ GPPG P E RGA QG G K
Sbjct: 352 PGPPGPKGEAGVDGQVGPPGQPGDKGE----------------RGAAGEQGPDGPKGSKG 395
Query: 139 FSSNGQSITF-----DAIQE 153
G+ + + +A+QE
Sbjct: 396 EPGKGEMVDYNGNINEALQE 415
Score = 62.4 bits (150), Expect = 3e-10
Identities = 41/113 (36%), Positives = 48/113 (42%), Gaps = 40/113 (35%)
Query: 28 GSPGIPGTPGSHGLPGRDGRDGLKGDPGPPGP------------MGPPGE---------- 65
G PG G PG G PG+DG G+KG+ G PG G PGE
Sbjct: 462 GKPGDMGPPGPQGPPGKDGPPGVKGENGHPGSPGEKGEKGETGQAGSPGEKGEAGEKGNP 521
Query: 66 ------MPCPPGNDGLPGAPGIPGECGE------------KGEPGERGPPGLP 100
+P P G G PG G+PG GE +GE G+RGP GLP
Sbjct: 522 GAEVPGLPGPEGPPGPPGLQGVPGPKGEAGLDGAKGEKGFQGEKGDRGPLGLP 574
Score = 60.8 bits (146), Expect = 1e-09
Identities = 43/121 (35%), Positives = 48/121 (39%), Gaps = 45/121 (37%)
Query: 28 GSPGIPGTPGSHGLPGRDGRDGLKGDP------------GPPGPMGPPGE---------- 65
G PG+PG PG G G DG+ G G P GP GP G GE
Sbjct: 347 GPPGLPGPPGPKGEAGVDGQVGPPGQPGDKGERGAAGEQGPDGPKGSKGEPGKGEMVDYN 406
Query: 66 -----------------MPCPPGNDGLPGAPGIPGECGEKGEP------GERGPPGLPAH 102
P PG G PGAPGIPG+ GE G P GE+GP G P
Sbjct: 407 GNINEALQEIRTLALMGPPGLPGQIGPPGAPGIPGQKGEIGLPGPPGHDGEKGPRGKPGD 466
Query: 103 L 103
+
Sbjct: 467 M 467
Score = 58.5 bits (140), Expect = 5e-09
Identities = 33/77 (42%), Positives = 36/77 (46%), Gaps = 7/77 (9%)
Query: 29 SPGIPGTPGSHGLPGRDGRDGLKGDPGPPGPMGPPGEMPC-------PPGNDGLPGAPGI 81
SPG P G GR G G KG G PG +G PG+ PPG G G PG
Sbjct: 114 SPGCNCPPAFQGPTGRPGLPGDKGAIGMPGRVGSPGDAGLSIIGPRGPPGQPGTRGFPGF 173
Query: 82 PGECGEKGEPGERGPPG 98
PG G G+PG GP G
Sbjct: 174 PGPIGLDGKPGHPGPKG 190
Score = 58.2 bits (139), Expect = 7e-09
Identities = 40/107 (37%), Positives = 45/107 (42%), Gaps = 34/107 (31%)
Query: 28 GSPGIPGTPGSHGLPGRDGRDGLKGD--------------PGPPGPMGPPG--EMPCPPG 71
G PG PG G G G+ G G KG+ PGP GP GPPG +P P G
Sbjct: 489 GHPGSPGEKGEKGETGQAGSPGEKGEAGEKGNPGAEVPGLPGPEGPPGPPGLQGVPGPKG 548
Query: 72 NDGLPGAPGIPGECGEKGE------------------PGERGPPGLP 100
GL GA G G GEKG+ PG GP G+P
Sbjct: 549 EAGLDGAKGEKGFQGEKGDRGPLGLPGASGLDGRPGPPGTPGPIGVP 595
Score = 49.3 bits (116), Expect = 3e-06
Identities = 25/56 (44%), Positives = 27/56 (48%), Gaps = 7/56 (12%)
Query: 28 GSPGIPGTPGSHGLPGRDGRDGLKGDPGPPGPMGPPGEM-------PCPPGNDGLP 76
G G G PG HG PG G G +G G GP G G+ PCP G DGLP
Sbjct: 614 GPTGAAGLPGLHGPPGDKGNRGERGKKGSRGPKGDKGDQGAPGLDAPCPLGEDGLP 669
Score = 38.9 bits (89), Expect = 0.004
Identities = 19/40 (47%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Query: 59 PMGPPGEMPCPPGNDGLPGAPGIPGECGEKGEPGERGPPG 98
P PG CPP G G PG+PG+ G G PG G PG
Sbjct: 111 PKTSPG-CNCPPAFQGPTGRPGLPGDKGAIGMPGRVGSPG 149
>gi|22027589 alpha 1 type XIII collagen isoform 9 [Homo sapiens]
Length = 688
Score = 87.8 bits (216), Expect = 8e-18
Identities = 45/77 (58%), Positives = 47/77 (61%), Gaps = 7/77 (9%)
Query: 28 GSPGIPGTPGSHGLPGRDGRDGLKGDPGPPGPMGPPGEMPCPPGNDGLPGA------PGI 81
G+PGIPG G GLPG G DG KG G PG MGPPG PPG DG PG PG
Sbjct: 447 GAPGIPGQKGEIGLPGPPGHDGEKGPRGKPGDMGPPGPQG-PPGKDGPPGVKGENGHPGS 505
Query: 82 PGECGEKGEPGERGPPG 98
PGE GEKGE G+ G PG
Sbjct: 506 PGEKGEKGETGQAGSPG 522
Score = 71.6 bits (174), Expect = 6e-13
Identities = 44/98 (44%), Positives = 46/98 (46%), Gaps = 19/98 (19%)
Query: 28 GSPGIPGTPGSHGLPGRDGRDGLKGDPGPPGPMGPPG-----------EMPCPPGNDGLP 76
G PG PG G G PG G G G PGPPGP G PG MP PG G
Sbjct: 244 GPPGPPGPSGPLGHPGLPGPMGPPGLPGPPGPKGDPGIQGYHGRKGERGMPGMPGKHGAK 303
Query: 77 GAPGI--------PGECGEKGEPGERGPPGLPAHLDEE 106
GAPGI PG G KGE G G PGLP L ++
Sbjct: 304 GAPGIAVAGMKGEPGIPGTKGEKGAEGSPGLPGLLGQK 341
Score = 68.9 bits (167), Expect = 4e-12
Identities = 33/74 (44%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
Query: 28 GSPGIPGTPGSHGLPGRDGRDGLKGDPGPPGPMGPPGE--MPCPPGNDGLPGAPGIPGEC 85
G G+PG G GL G G G +G+ G GP+G PG + PG G PG G+PG
Sbjct: 551 GLQGVPGPKGEAGLDGAKGEKGFQGEKGDRGPLGLPGASGLDGRPGPPGTPGPIGVPGPA 610
Query: 86 GEKGEPGERGPPGL 99
G KGE G +G PG+
Sbjct: 611 GPKGERGSKGDPGM 624
Score = 67.8 bits (164), Expect = 8e-12
Identities = 35/71 (49%), Positives = 39/71 (54%), Gaps = 4/71 (5%)
Query: 28 GSPGIPGTPGSHGLPGRDGRDGLKGDPGPPGPMGPPGEMPCPPGNDGLPGAPGIPGECGE 87
G PG PGTPG G+PG G G +G G PG GP G P GL G PG G GE
Sbjct: 593 GRPGPPGTPGPIGVPGPAGPKGERGSKGDPGMTGPTGAAGLP----GLHGPPGDKGNRGE 648
Query: 88 KGEPGERGPPG 98
+G+ G RGP G
Sbjct: 649 RGKKGSRGPKG 659
Score = 67.0 bits (162), Expect = 1e-11
Identities = 36/74 (48%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Query: 27 VGSPGIPGTPGSHGLPGRDGRDGLKGDPGPPGPMGPPGEMPCPP-GNDGLPGAPGIPGEC 85
+G PG+PG PG G PG G G KG+ G PG G G P G+ G PGIPG
Sbjct: 264 MGPPGLPGPPGPKGDPGIQGYHGRKGERGMPGMPGKHGAKGAPGIAVAGMKGEPGIPGTK 323
Query: 86 GEKGEPGERGPPGL 99
GEKG G G PGL
Sbjct: 324 GEKGAEGSPGLPGL 337
Score = 67.0 bits (162), Expect = 1e-11
Identities = 40/105 (38%), Positives = 45/105 (42%), Gaps = 33/105 (31%)
Query: 27 VGSPGIPGTPGSHGLPGRDGRDGLKGD-------------------------------PG 55
VG PG PG G G G G DG KG PG
Sbjct: 379 VGPPGQPGDKGERGAAGEQGPDGPKGSKGEPGKGEMVDYNGNINEALQEIRTLALMGPPG 438
Query: 56 PPGPMGPPGE--MPCPPGNDGLPGAPGIPGECGEKGEPGERGPPG 98
PG +GPPG +P G GLPG PG GE G +G+PG+ GPPG
Sbjct: 439 LPGQIGPPGAPGIPGQKGEIGLPGPPGHDGEKGPRGKPGDMGPPG 483
Score = 66.6 bits (161), Expect = 2e-11
Identities = 35/71 (49%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Query: 28 GSPGIPGTPGSHGLPGRDGRDGLKGDPGPPGPMGPPGEMPCPPGNDGLPGAPGIPGECGE 87
G G G G GLPG G DG G PG PGP+G PG P G G G PG+ G G
Sbjct: 572 GFQGEKGDRGPLGLPGASGLDGRPGPPGTPGPIGVPGPAG-PKGERGSKGDPGMTGPTGA 630
Query: 88 KGEPGERGPPG 98
G PG GPPG
Sbjct: 631 AGLPGLHGPPG 641
Score = 65.1 bits (157), Expect = 5e-11
Identities = 48/140 (34%), Positives = 59/140 (42%), Gaps = 30/140 (21%)
Query: 28 GSPGIP--GTPGSHGLPGRDGRDGLKGDPGPPGPMGPPGE-------MPCPPGNDGLPGA 78
G+PGI G G G+PG G G +G PG PG +G GE + G G PG
Sbjct: 304 GAPGIAVAGMKGEPGIPGTKGEKGAEGSPGLPGLLGQKGEKGDAGNSIGGGRGEPGPPGL 363
Query: 79 PGIPGECGEKGEPGERGPPGLPAHLDEELQATLHDFRHQILQTRGALSLQGSIMTVGEKV 138
PG PG GE G G+ GPPG P E RGA QG G K
Sbjct: 364 PGPPGPKGEAGVDGQVGPPGQPGDKGE----------------RGAAGEQGPDGPKGSKG 407
Query: 139 FSSNGQSITF-----DAIQE 153
G+ + + +A+QE
Sbjct: 408 EPGKGEMVDYNGNINEALQE 427
Score = 64.7 bits (156), Expect = 7e-11
Identities = 31/60 (51%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
Query: 28 GSPGIPGTPGSHGLPGRDGRDGLKGDPGPPGPMGPPGEMPCPPGNDGLPGAPGIPGECGE 87
G PG+PG PG+ G PG G GL G PG PGP G G + PPG G G G G+CGE
Sbjct: 128 GRPGLPGQPGTRGFPGFPGPIGLDGKPGHPGPKGDMG-LTGPPGQPGPQGQKGEKGQCGE 186
Score = 63.5 bits (153), Expect = 2e-10
Identities = 34/70 (48%), Positives = 38/70 (54%), Gaps = 1/70 (1%)
Query: 26 CVGSPGIPGTPGSHGLPGRDGRDGLKGDPGPPGPMGPPGEMPCPPGNDGLPGAPGIPGEC 85
C P G G GLPG+ G G G PGP G G PG P P G+ GL G PG PG
Sbjct: 117 CNCPPAFQGPTGRPGLPGQPGTRGFPGFPGPIGLDGKPGH-PGPKGDMGLTGPPGQPGPQ 175
Query: 86 GEKGEPGERG 95
G+KGE G+ G
Sbjct: 176 GQKGEKGQCG 185
Score = 62.4 bits (150), Expect = 3e-10
Identities = 37/95 (38%), Positives = 42/95 (44%), Gaps = 22/95 (23%)
Query: 28 GSPGIPGTPGSHGLPGRDGRDGLKGDPGPPGPMGPPGE----------MPCPPGNDGLPG 77
G PG+ G G G PG G G G G PG G GE +P P G G PG
Sbjct: 492 GPPGVKGENGHPGSPGEKGEKGETGQAGSPGEKGEAGEKGNPGAEVPGLPGPEGPPGPPG 551
Query: 78 APGIPGECGE------------KGEPGERGPPGLP 100
G+PG GE +GE G+RGP GLP
Sbjct: 552 LQGVPGPKGEAGLDGAKGEKGFQGEKGDRGPLGLP 586
Score = 60.8 bits (146), Expect = 1e-09
Identities = 43/121 (35%), Positives = 48/121 (39%), Gaps = 45/121 (37%)
Query: 28 GSPGIPGTPGSHGLPGRDGRDGLKGDP------------GPPGPMGPPGE---------- 65
G PG+PG PG G G DG+ G G P GP GP G GE
Sbjct: 359 GPPGLPGPPGPKGEAGVDGQVGPPGQPGDKGERGAAGEQGPDGPKGSKGEPGKGEMVDYN 418
Query: 66 -----------------MPCPPGNDGLPGAPGIPGECGEKGEP------GERGPPGLPAH 102
P PG G PGAPGIPG+ GE G P GE+GP G P
Sbjct: 419 GNINEALQEIRTLALMGPPGLPGQIGPPGAPGIPGQKGEIGLPGPPGHDGEKGPRGKPGD 478
Query: 103 L 103
+
Sbjct: 479 M 479
Score = 59.7 bits (143), Expect = 2e-09
Identities = 32/70 (45%), Positives = 39/70 (55%), Gaps = 16/70 (22%)
Query: 43 GRDGRDGLKGDPGPPGPMGPPGEMPCPPGNDGLP---GAPGIPGECGEKGEP-------- 91
G + ++G PGPPGP GP G P G+ GLP G PG+PG G KG+P
Sbjct: 232 GEQSQASIQGPPGPPGPPGPSG----PLGHPGLPGPMGPPGLPGPPGPKGDPGIQGYHGR 287
Query: 92 -GERGPPGLP 100
GERG PG+P
Sbjct: 288 KGERGMPGMP 297
Score = 58.2 bits (139), Expect = 7e-09
Identities = 40/107 (37%), Positives = 45/107 (42%), Gaps = 34/107 (31%)
Query: 28 GSPGIPGTPGSHGLPGRDGRDGLKGD--------------PGPPGPMGPPG--EMPCPPG 71
G PG PG G G G+ G G KG+ PGP GP GPPG +P P G
Sbjct: 501 GHPGSPGEKGEKGETGQAGSPGEKGEAGEKGNPGAEVPGLPGPEGPPGPPGLQGVPGPKG 560
Query: 72 NDGLPGAPGIPGECGEKGE------------------PGERGPPGLP 100
GL GA G G GEKG+ PG GP G+P
Sbjct: 561 EAGLDGAKGEKGFQGEKGDRGPLGLPGASGLDGRPGPPGTPGPIGVP 607
Score = 55.5 bits (132), Expect = 4e-08
Identities = 30/64 (46%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Query: 35 TPGSHGLPGRDGRDGLKGDPGPPGPMGPPGEMPCPPGNDGLPGAPGIPGECGEKGEPGER 94
+PG + P G G G PG PG G PG P P G DG PG PG G+ G G PG+
Sbjct: 114 SPGCNCPPAFQGPTGRPGLPGQPGTRGFPG-FPGPIGLDGKPGHPGPKGDMGLTGPPGQP 172
Query: 95 GPPG 98
GP G
Sbjct: 173 GPQG 176
Score = 49.3 bits (116), Expect = 3e-06
Identities = 25/56 (44%), Positives = 27/56 (48%), Gaps = 7/56 (12%)
Query: 28 GSPGIPGTPGSHGLPGRDGRDGLKGDPGPPGPMGPPGEM-------PCPPGNDGLP 76
G G G PG HG PG G G +G G GP G G+ PCP G DGLP
Sbjct: 626 GPTGAAGLPGLHGPPGDKGNRGERGKKGSRGPKGDKGDQGAPGLDAPCPLGEDGLP 681
Score = 48.9 bits (115), Expect = 4e-06
Identities = 41/134 (30%), Positives = 44/134 (32%), Gaps = 61/134 (45%)
Query: 28 GSPGIPGTPGSHGLPGRDGRDGLKGD---------PGPPGPMGPPGE------------M 66
G+ G PG PG GL G+ G G KGD PGP G G G+ M
Sbjct: 137 GTRGFPGFPGPIGLDGKPGHPGPKGDMGLTGPPGQPGPQGQKGEKGQCGEYPHRECLSSM 196
Query: 67 P----------------------CPP------------------GNDGLPGAPGIPGECG 86
P PP G G PG PG G G
Sbjct: 197 PAALRSSQIIALKLLPLLNSVRLAPPPVIKRRTFQGEQSQASIQGPPGPPGPPGPSGPLG 256
Query: 87 EKGEPGERGPPGLP 100
G PG GPPGLP
Sbjct: 257 HPGLPGPMGPPGLP 270
Score = 47.4 bits (111), Expect = 1e-05
Identities = 32/72 (44%), Positives = 35/72 (48%), Gaps = 13/72 (18%)
Query: 41 LPGRDGRDGLKGDPG---PP---GPMGPPGEMPCPPGNDGLPGAP------GIPGECGEK 88
L R R+ K PG PP GP G PG +P PG G PG P G PG G K
Sbjct: 102 LHSRRRREAPKTSPGCNCPPAFQGPTGRPG-LPGQPGTRGFPGFPGPIGLDGKPGHPGPK 160
Query: 89 GEPGERGPPGLP 100
G+ G GPPG P
Sbjct: 161 GDMGLTGPPGQP 172
Score = 40.8 bits (94), Expect = 0.001
Identities = 22/47 (46%), Positives = 25/47 (53%), Gaps = 4/47 (8%)
Query: 59 PMGPPGEMPCPPGNDGLPGAPGIPGECGEKGEPGERGPPGL---PAH 102
P PG CPP G G PG+PG+ G +G PG GP GL P H
Sbjct: 111 PKTSPG-CNCPPAFQGPTGRPGLPGQPGTRGFPGFPGPIGLDGKPGH 156
>gi|22027583 alpha 1 type XIII collagen isoform 7 [Homo sapiens]
Length = 703
Score = 87.8 bits (216), Expect = 8e-18
Identities = 45/77 (58%), Positives = 47/77 (61%), Gaps = 7/77 (9%)
Query: 28 GSPGIPGTPGSHGLPGRDGRDGLKGDPGPPGPMGPPGEMPCPPGNDGLPGA------PGI 81
G+PGIPG G GLPG G DG KG G PG MGPPG PPG DG PG PG
Sbjct: 476 GAPGIPGQKGEIGLPGPPGHDGEKGPRGKPGDMGPPGPQG-PPGKDGPPGVKGENGHPGS 534
Query: 82 PGECGEKGEPGERGPPG 98
PGE GEKGE G+ G PG
Sbjct: 535 PGEKGEKGETGQAGSPG 551
Score = 71.6 bits (174), Expect = 6e-13
Identities = 44/98 (44%), Positives = 46/98 (46%), Gaps = 19/98 (19%)
Query: 28 GSPGIPGTPGSHGLPGRDGRDGLKGDPGPPGPMGPPG-----------EMPCPPGNDGLP 76
G PG PG G G PG G G G PGPPGP G PG MP PG G
Sbjct: 273 GPPGPPGPSGPLGHPGLPGPMGPPGLPGPPGPKGDPGIQGYHGRKGERGMPGMPGKHGAK 332
Query: 77 GAPGI--------PGECGEKGEPGERGPPGLPAHLDEE 106
GAPGI PG G KGE G G PGLP L ++
Sbjct: 333 GAPGIAVAGMKGEPGIPGTKGEKGAEGSPGLPGLLGQK 370
Score = 68.9 bits (167), Expect = 4e-12
Identities = 33/74 (44%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
Query: 28 GSPGIPGTPGSHGLPGRDGRDGLKGDPGPPGPMGPPGE--MPCPPGNDGLPGAPGIPGEC 85
G G+PG G GL G G G +G+ G GP+G PG + PG G PG G+PG
Sbjct: 566 GLQGVPGPKGEAGLDGAKGEKGFQGEKGDRGPLGLPGASGLDGRPGPPGTPGPIGVPGPA 625
Query: 86 GEKGEPGERGPPGL 99
G KGE G +G PG+
Sbjct: 626 GPKGERGSKGDPGM 639
Score = 68.2 bits (165), Expect = 6e-12
Identities = 37/79 (46%), Positives = 43/79 (54%), Gaps = 9/79 (11%)
Query: 28 GSPGIPGTPGSHGLPGRDGRDG--------LKGDPGPPGPMGPPGEMPCPPGNDGLPGAP 79
G PG+PG G+ G+PGR G G +G PG PG G PG P P G DG PG P
Sbjct: 128 GRPGLPGDKGAIGMPGRVGSPGDAGLSIIGPRGPPGQPGTRGFPG-FPGPIGLDGKPGHP 186
Query: 80 GIPGECGEKGEPGERGPPG 98
G G+ G G PG+ GP G
Sbjct: 187 GPKGDMGLTGPPGQPGPQG 205
Score = 67.8 bits (164), Expect = 8e-12
Identities = 35/71 (49%), Positives = 39/71 (54%), Gaps = 4/71 (5%)
Query: 28 GSPGIPGTPGSHGLPGRDGRDGLKGDPGPPGPMGPPGEMPCPPGNDGLPGAPGIPGECGE 87
G PG PGTPG G+PG G G +G G PG GP G P GL G PG G GE
Sbjct: 608 GRPGPPGTPGPIGVPGPAGPKGERGSKGDPGMTGPTGAAGLP----GLHGPPGDKGNRGE 663
Query: 88 KGEPGERGPPG 98
+G+ G RGP G
Sbjct: 664 RGKKGSRGPKG 674
Score = 67.0 bits (162), Expect = 1e-11
Identities = 36/74 (48%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Query: 27 VGSPGIPGTPGSHGLPGRDGRDGLKGDPGPPGPMGPPGEMPCPP-GNDGLPGAPGIPGEC 85
+G PG+PG PG G PG G G KG+ G PG G G P G+ G PGIPG
Sbjct: 293 MGPPGLPGPPGPKGDPGIQGYHGRKGERGMPGMPGKHGAKGAPGIAVAGMKGEPGIPGTK 352
Query: 86 GEKGEPGERGPPGL 99
GEKG G G PGL
Sbjct: 353 GEKGAEGSPGLPGL 366
Score = 67.0 bits (162), Expect = 1e-11
Identities = 40/105 (38%), Positives = 45/105 (42%), Gaps = 33/105 (31%)
Query: 27 VGSPGIPGTPGSHGLPGRDGRDGLKGD-------------------------------PG 55
VG PG PG G G G G DG KG PG
Sbjct: 408 VGPPGQPGDKGERGAAGEQGPDGPKGSKGEPGKGEMVDYNGNINEALQEIRTLALMGPPG 467
Query: 56 PPGPMGPPGE--MPCPPGNDGLPGAPGIPGECGEKGEPGERGPPG 98
PG +GPPG +P G GLPG PG GE G +G+PG+ GPPG
Sbjct: 468 LPGQIGPPGAPGIPGQKGEIGLPGPPGHDGEKGPRGKPGDMGPPG 512
Score = 66.6 bits (161), Expect = 2e-11
Identities = 35/71 (49%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Query: 28 GSPGIPGTPGSHGLPGRDGRDGLKGDPGPPGPMGPPGEMPCPPGNDGLPGAPGIPGECGE 87
G G G G GLPG G DG G PG PGP+G PG P G G G PG+ G G
Sbjct: 587 GFQGEKGDRGPLGLPGASGLDGRPGPPGTPGPIGVPGPAG-PKGERGSKGDPGMTGPTGA 645
Query: 88 KGEPGERGPPG 98
G PG GPPG
Sbjct: 646 AGLPGLHGPPG 656
Score = 65.1 bits (157), Expect = 5e-11
Identities = 48/140 (34%), Positives = 59/140 (42%), Gaps = 30/140 (21%)
Query: 28 GSPGIP--GTPGSHGLPGRDGRDGLKGDPGPPGPMGPPGE-------MPCPPGNDGLPGA 78
G+PGI G G G+PG G G +G PG PG +G GE + G G PG
Sbjct: 333 GAPGIAVAGMKGEPGIPGTKGEKGAEGSPGLPGLLGQKGEKGDAGNSIGGGRGEPGPPGL 392
Query: 79 PGIPGECGEKGEPGERGPPGLPAHLDEELQATLHDFRHQILQTRGALSLQGSIMTVGEKV 138
PG PG GE G G+ GPPG P E RGA QG G K
Sbjct: 393 PGPPGPKGEAGVDGQVGPPGQPGDKGE----------------RGAAGEQGPDGPKGSKG 436
Query: 139 FSSNGQSITF-----DAIQE 153
G+ + + +A+QE
Sbjct: 437 EPGKGEMVDYNGNINEALQE 456
Score = 64.3 bits (155), Expect = 9e-11
Identities = 39/89 (43%), Positives = 41/89 (46%), Gaps = 12/89 (13%)
Query: 20 CEVKDVCVGSPGIPGTPGSHGLPGRDGRDGLKGDPGPP--GPMGPPGEMPCPPGNDGLPG 77
C G G PG PG G G GR G GD G GP GPPG+ PG G PG
Sbjct: 117 CNCPPAFQGPTGRPGLPGDKGAIGMPGRVGSPGDAGLSIIGPRGPPGQ----PGTRGFPG 172
Query: 78 AP------GIPGECGEKGEPGERGPPGLP 100
P G PG G KG+ G GPPG P
Sbjct: 173 FPGPIGLDGKPGHPGPKGDMGLTGPPGQP 201
Score = 62.8 bits (151), Expect = 3e-10
Identities = 42/99 (42%), Positives = 47/99 (47%), Gaps = 26/99 (26%)
Query: 28 GSPGIPGTPGSHGLPGRDGRDGLKGDPGPPGP------------MGPPGEM-----PCPP 70
G PG G PG G PG+DG G+KG+ G PG G PGE P
Sbjct: 503 GKPGDMGPPGPQGPPGKDGPPGVKGENGHPGSPGEKGEKGETGQAGSPGEKGEAGEKGNP 562
Query: 71 GNDGLPGAPGIPGEC------GEK---GEPGERGPPGLP 100
G +GL G PG GE GEK GE G+RGP GLP
Sbjct: 563 GAEGLQGVPGPKGEAGLDGAKGEKGFQGEKGDRGPLGLP 601
Score = 60.8 bits (146), Expect = 1e-09
Identities = 43/121 (35%), Positives = 48/121 (39%), Gaps = 45/121 (37%)
Query: 28 GSPGIPGTPGSHGLPGRDGRDGLKGDP------------GPPGPMGPPGE---------- 65
G PG+PG PG G G DG+ G G P GP GP G GE
Sbjct: 388 GPPGLPGPPGPKGEAGVDGQVGPPGQPGDKGERGAAGEQGPDGPKGSKGEPGKGEMVDYN 447
Query: 66 -----------------MPCPPGNDGLPGAPGIPGECGEKGEP------GERGPPGLPAH 102
P PG G PGAPGIPG+ GE G P GE+GP G P
Sbjct: 448 GNINEALQEIRTLALMGPPGLPGQIGPPGAPGIPGQKGEIGLPGPPGHDGEKGPRGKPGD 507
Query: 103 L 103
+
Sbjct: 508 M 508
Score = 60.5 bits (145), Expect = 1e-09
Identities = 30/61 (49%), Positives = 34/61 (55%), Gaps = 1/61 (1%)
Query: 27 VGSPGIPGTPGSHGLPGRDGRDGLKGDPGPPGPMGPPGEMPCPPGNDGLPGAPGIPGECG 86
+G G PG PG+ G PG G GL G PG PGP G G + PPG G G G G+CG
Sbjct: 156 IGPRGPPGQPGTRGFPGFPGPIGLDGKPGHPGPKGDMG-LTGPPGQPGPQGQKGEKGQCG 214
Query: 87 E 87
E
Sbjct: 215 E 215
Score = 59.7 bits (143), Expect = 2e-09
Identities = 32/70 (45%), Positives = 39/70 (55%), Gaps = 16/70 (22%)
Query: 43 GRDGRDGLKGDPGPPGPMGPPGEMPCPPGNDGLP---GAPGIPGECGEKGEP-------- 91
G + ++G PGPPGP GP G P G+ GLP G PG+PG G KG+P
Sbjct: 261 GEQSQASIQGPPGPPGPPGPSG----PLGHPGLPGPMGPPGLPGPPGPKGDPGIQGYHGR 316
Query: 92 -GERGPPGLP 100
GERG PG+P
Sbjct: 317 KGERGMPGMP 326
Score = 58.5 bits (140), Expect = 5e-09
Identities = 33/77 (42%), Positives = 36/77 (46%), Gaps = 7/77 (9%)
Query: 29 SPGIPGTPGSHGLPGRDGRDGLKGDPGPPGPMGPPGEMPC-------PPGNDGLPGAPGI 81
SPG P G GR G G KG G PG +G PG+ PPG G G PG
Sbjct: 114 SPGCNCPPAFQGPTGRPGLPGDKGAIGMPGRVGSPGDAGLSIIGPRGPPGQPGTRGFPGF 173
Query: 82 PGECGEKGEPGERGPPG 98
PG G G+PG GP G
Sbjct: 174 PGPIGLDGKPGHPGPKG 190
Score = 49.3 bits (116), Expect = 3e-06
Identities = 25/56 (44%), Positives = 27/56 (48%), Gaps = 7/56 (12%)
Query: 28 GSPGIPGTPGSHGLPGRDGRDGLKGDPGPPGPMGPPGEM-------PCPPGNDGLP 76
G G G PG HG PG G G +G G GP G G+ PCP G DGLP
Sbjct: 641 GPTGAAGLPGLHGPPGDKGNRGERGKKGSRGPKGDKGDQGAPGLDAPCPLGEDGLP 696
Score = 48.9 bits (115), Expect = 4e-06
Identities = 41/134 (30%), Positives = 44/134 (32%), Gaps = 61/134 (45%)
Query: 28 GSPGIPGTPGSHGLPGRDGRDGLKGD---------PGPPGPMGPPGE------------M 66
G+ G PG PG GL G+ G G KGD PGP G G G+ M
Sbjct: 166 GTRGFPGFPGPIGLDGKPGHPGPKGDMGLTGPPGQPGPQGQKGEKGQCGEYPHRECLSSM 225
Query: 67 P----------------------CPP------------------GNDGLPGAPGIPGECG 86
P PP G G PG PG G G
Sbjct: 226 PAALRSSQIIALKLLPLLNSVRLAPPPVIKRRTFQGEQSQASIQGPPGPPGPPGPSGPLG 285
Query: 87 EKGEPGERGPPGLP 100
G PG GPPGLP
Sbjct: 286 HPGLPGPMGPPGLP 299
Score = 38.9 bits (89), Expect = 0.004
Identities = 19/40 (47%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Query: 59 PMGPPGEMPCPPGNDGLPGAPGIPGECGEKGEPGERGPPG 98
P PG CPP G G PG+PG+ G G PG G PG
Sbjct: 111 PKTSPG-CNCPPAFQGPTGRPGLPGDKGAIGMPGRVGSPG 149
>gi|22027577 alpha 1 type XIII collagen isoform 5 [Homo sapiens]
Length = 695
Score = 87.8 bits (216), Expect = 8e-18
Identities = 45/77 (58%), Positives = 47/77 (61%), Gaps = 7/77 (9%)
Query: 28 GSPGIPGTPGSHGLPGRDGRDGLKGDPGPPGPMGPPGEMPCPPGNDGLPGA------PGI 81
G+PGIPG G GLPG G DG KG G PG MGPPG PPG DG PG PG
Sbjct: 454 GAPGIPGQKGEIGLPGPPGHDGEKGPRGKPGDMGPPGPQG-PPGKDGPPGVKGENGHPGS 512
Query: 82 PGECGEKGEPGERGPPG 98
PGE GEKGE G+ G PG
Sbjct: 513 PGEKGEKGETGQAGSPG 529
Score = 71.6 bits (174), Expect = 6e-13
Identities = 44/98 (44%), Positives = 46/98 (46%), Gaps = 19/98 (19%)
Query: 28 GSPGIPGTPGSHGLPGRDGRDGLKGDPGPPGPMGPPG-----------EMPCPPGNDGLP 76
G PG PG G G PG G G G PGPPGP G PG MP PG G
Sbjct: 251 GPPGPPGPSGPLGHPGLPGPMGPPGLPGPPGPKGDPGIQGYHGRKGERGMPGMPGKHGAK 310
Query: 77 GAPGI--------PGECGEKGEPGERGPPGLPAHLDEE 106
GAPGI PG G KGE G G PGLP L ++
Sbjct: 311 GAPGIAVAGMKGEPGIPGTKGEKGAEGSPGLPGLLGQK 348
Score = 68.9 bits (167), Expect = 4e-12
Identities = 33/74 (44%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
Query: 28 GSPGIPGTPGSHGLPGRDGRDGLKGDPGPPGPMGPPGE--MPCPPGNDGLPGAPGIPGEC 85
G G+PG G GL G G G +G+ G GP+G PG + PG G PG G+PG
Sbjct: 558 GLQGVPGPKGEAGLDGAKGEKGFQGEKGDRGPLGLPGASGLDGRPGPPGTPGPIGVPGPA 617
Query: 86 GEKGEPGERGPPGL 99
G KGE G +G PG+
Sbjct: 618 GPKGERGSKGDPGM 631
Score = 67.8 bits (164), Expect = 8e-12
Identities = 35/71 (49%), Positives = 39/71 (54%), Gaps = 4/71 (5%)
Query: 28 GSPGIPGTPGSHGLPGRDGRDGLKGDPGPPGPMGPPGEMPCPPGNDGLPGAPGIPGECGE 87
G PG PGTPG G+PG G G +G G PG GP G P GL G PG G GE
Sbjct: 600 GRPGPPGTPGPIGVPGPAGPKGERGSKGDPGMTGPTGAAGLP----GLHGPPGDKGNRGE 655
Query: 88 KGEPGERGPPG 98
+G+ G RGP G
Sbjct: 656 RGKKGSRGPKG 666
Score = 67.0 bits (162), Expect = 1e-11
Identities = 36/74 (48%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Query: 27 VGSPGIPGTPGSHGLPGRDGRDGLKGDPGPPGPMGPPGEMPCPP-GNDGLPGAPGIPGEC 85
+G PG+PG PG G PG G G KG+ G PG G G P G+ G PGIPG
Sbjct: 271 MGPPGLPGPPGPKGDPGIQGYHGRKGERGMPGMPGKHGAKGAPGIAVAGMKGEPGIPGTK 330
Query: 86 GEKGEPGERGPPGL 99
GEKG G G PGL
Sbjct: 331 GEKGAEGSPGLPGL 344
Score = 67.0 bits (162), Expect = 1e-11
Identities = 40/105 (38%), Positives = 45/105 (42%), Gaps = 33/105 (31%)
Query: 27 VGSPGIPGTPGSHGLPGRDGRDGLKGD-------------------------------PG 55
VG PG PG G G G G DG KG PG
Sbjct: 386 VGPPGQPGDKGERGAAGEQGPDGPKGSKGEPGKGEMVDYNGNINEALQEIRTLALMGPPG 445
Query: 56 PPGPMGPPGE--MPCPPGNDGLPGAPGIPGECGEKGEPGERGPPG 98
PG +GPPG +P G GLPG PG GE G +G+PG+ GPPG
Sbjct: 446 LPGQIGPPGAPGIPGQKGEIGLPGPPGHDGEKGPRGKPGDMGPPG 490
Score = 66.6 bits (161), Expect = 2e-11
Identities = 35/71 (49%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Query: 28 GSPGIPGTPGSHGLPGRDGRDGLKGDPGPPGPMGPPGEMPCPPGNDGLPGAPGIPGECGE 87
G G G G GLPG G DG G PG PGP+G PG P G G G PG+ G G
Sbjct: 579 GFQGEKGDRGPLGLPGASGLDGRPGPPGTPGPIGVPGPAG-PKGERGSKGDPGMTGPTGA 637
Query: 88 KGEPGERGPPG 98
G PG GPPG
Sbjct: 638 AGLPGLHGPPG 648
Score = 65.1 bits (157), Expect = 5e-11
Identities = 38/89 (42%), Positives = 41/89 (46%), Gaps = 10/89 (11%)
Query: 20 CEVKDVCVGSPGIPGTPGSHGLPGRDGRDGLKGDPGPP--GPMGPPGE--------MPCP 69
C G G PG PG G G GR G GD G GP GPPG+ P P
Sbjct: 117 CNCPPAFQGPTGRPGLPGDKGAIGMPGRVGSPGDAGLSIIGPRGPPGQPGTRGFPGFPGP 176
Query: 70 PGNDGLPGAPGIPGECGEKGEPGERGPPG 98
G DG PG PG G+ G G PG+ GP G
Sbjct: 177 IGLDGKPGHPGPKGDMGLTGPPGQPGPQG 205
Score = 65.1 bits (157), Expect = 5e-11
Identities = 44/114 (38%), Positives = 52/114 (45%), Gaps = 4/114 (3%)
Query: 28 GSPGIPGTPGSHGLPGRDGRDGLKGDP--GPPGPMGPPGEMPCP--PGNDGLPGAPGIPG 83
G PG+PG G+ G+PGR G G G GP GP G PG P PG GL G PG PG
Sbjct: 128 GRPGLPGDKGAIGMPGRVGSPGDAGLSIIGPRGPPGQPGTRGFPGFPGPIGLDGKPGHPG 187
Query: 84 ECGEKGEPGERGPPGLPAHLDEELQATLHDFRHQILQTRGALSLQGSIMTVGEK 137
G+ G G G PG E+ Q + R + AL I GE+
Sbjct: 188 PKGDMGLTGPPGQPGPQGQKGEKGQCGEYPHRECLSSMPAALRSSQIIALKGEQ 241
Score = 65.1 bits (157), Expect = 5e-11
Identities = 48/140 (34%), Positives = 59/140 (42%), Gaps = 30/140 (21%)
Query: 28 GSPGIP--GTPGSHGLPGRDGRDGLKGDPGPPGPMGPPGE-------MPCPPGNDGLPGA 78
G+PGI G G G+PG G G +G PG PG +G GE + G G PG
Sbjct: 311 GAPGIAVAGMKGEPGIPGTKGEKGAEGSPGLPGLLGQKGEKGDAGNSIGGGRGEPGPPGL 370
Query: 79 PGIPGECGEKGEPGERGPPGLPAHLDEELQATLHDFRHQILQTRGALSLQGSIMTVGEKV 138
PG PG GE G G+ GPPG P E RGA QG G K
Sbjct: 371 PGPPGPKGEAGVDGQVGPPGQPGDKGE----------------RGAAGEQGPDGPKGSKG 414
Query: 139 FSSNGQSITF-----DAIQE 153
G+ + + +A+QE
Sbjct: 415 EPGKGEMVDYNGNINEALQE 434
Score = 62.4 bits (150), Expect = 3e-10
Identities = 41/113 (36%), Positives = 48/113 (42%), Gaps = 40/113 (35%)
Query: 28 GSPGIPGTPGSHGLPGRDGRDGLKGDPGPPGP------------MGPPGE---------- 65
G PG G PG G PG+DG G+KG+ G PG G PGE
Sbjct: 481 GKPGDMGPPGPQGPPGKDGPPGVKGENGHPGSPGEKGEKGETGQAGSPGEKGEAGEKGNP 540
Query: 66 ------MPCPPGNDGLPGAPGIPGECGE------------KGEPGERGPPGLP 100
+P P G G PG G+PG GE +GE G+RGP GLP
Sbjct: 541 GAEVPGLPGPEGPPGPPGLQGVPGPKGEAGLDGAKGEKGFQGEKGDRGPLGLP 593
Score = 60.8 bits (146), Expect = 1e-09
Identities = 38/99 (38%), Positives = 44/99 (44%), Gaps = 26/99 (26%)
Query: 27 VGSPGIPGTPGSHGLPGRDGRDGLKGDPGPPGPMGPPGEMPCPPGNDGLPGAPGIPGECG 86
+G G PG PG+ G PG G GL G PG PGP G G + PPG G G G G+CG
Sbjct: 156 IGPRGPPGQPGTRGFPGFPGPIGLDGKPGHPGPKGDMG-LTGPPGQPGPQGQKGEKGQCG 214
Query: 87 E----------------------KGEPGE---RGPPGLP 100
E KGE + +GPPG P
Sbjct: 215 EYPHRECLSSMPAALRSSQIIALKGEQSQASIQGPPGPP 253
Score = 60.8 bits (146), Expect = 1e-09
Identities = 33/72 (45%), Positives = 40/72 (55%), Gaps = 16/72 (22%)
Query: 41 LPGRDGRDGLKGDPGPPGPMGPPGEMPCPPGNDGLP---GAPGIPGECGEKGEP------ 91
L G + ++G PGPPGP GP G P G+ GLP G PG+PG G KG+P
Sbjct: 237 LKGEQSQASIQGPPGPPGPPGPSG----PLGHPGLPGPMGPPGLPGPPGPKGDPGIQGYH 292
Query: 92 ---GERGPPGLP 100
GERG PG+P
Sbjct: 293 GRKGERGMPGMP 304
Score = 60.8 bits (146), Expect = 1e-09
Identities = 43/121 (35%), Positives = 48/121 (39%), Gaps = 45/121 (37%)
Query: 28 GSPGIPGTPGSHGLPGRDGRDGLKGDP------------GPPGPMGPPGE---------- 65
G PG+PG PG G G DG+ G G P GP GP G GE
Sbjct: 366 GPPGLPGPPGPKGEAGVDGQVGPPGQPGDKGERGAAGEQGPDGPKGSKGEPGKGEMVDYN 425
Query: 66 -----------------MPCPPGNDGLPGAPGIPGECGEKGEP------GERGPPGLPAH 102
P PG G PGAPGIPG+ GE G P GE+GP G P
Sbjct: 426 GNINEALQEIRTLALMGPPGLPGQIGPPGAPGIPGQKGEIGLPGPPGHDGEKGPRGKPGD 485
Query: 103 L 103
+
Sbjct: 486 M 486
Score = 58.5 bits (140), Expect = 5e-09
Identities = 33/77 (42%), Positives = 36/77 (46%), Gaps = 7/77 (9%)
Query: 29 SPGIPGTPGSHGLPGRDGRDGLKGDPGPPGPMGPPGEMPC-------PPGNDGLPGAPGI 81
SPG P G GR G G KG G PG +G PG+ PPG G G PG
Sbjct: 114 SPGCNCPPAFQGPTGRPGLPGDKGAIGMPGRVGSPGDAGLSIIGPRGPPGQPGTRGFPGF 173
Query: 82 PGECGEKGEPGERGPPG 98
PG G G+PG GP G
Sbjct: 174 PGPIGLDGKPGHPGPKG 190
Score = 58.2 bits (139), Expect = 7e-09
Identities = 40/107 (37%), Positives = 45/107 (42%), Gaps = 34/107 (31%)
Query: 28 GSPGIPGTPGSHGLPGRDGRDGLKGD--------------PGPPGPMGPPG--EMPCPPG 71
G PG PG G G G+ G G KG+ PGP GP GPPG +P P G
Sbjct: 508 GHPGSPGEKGEKGETGQAGSPGEKGEAGEKGNPGAEVPGLPGPEGPPGPPGLQGVPGPKG 567
Query: 72 NDGLPGAPGIPGECGEKGE------------------PGERGPPGLP 100
GL GA G G GEKG+ PG GP G+P
Sbjct: 568 EAGLDGAKGEKGFQGEKGDRGPLGLPGASGLDGRPGPPGTPGPIGVP 614
Score = 49.3 bits (116), Expect = 3e-06
Identities = 25/56 (44%), Positives = 27/56 (48%), Gaps = 7/56 (12%)
Query: 28 GSPGIPGTPGSHGLPGRDGRDGLKGDPGPPGPMGPPGEM-------PCPPGNDGLP 76
G G G PG HG PG G G +G G GP G G+ PCP G DGLP
Sbjct: 633 GPTGAAGLPGLHGPPGDKGNRGERGKKGSRGPKGDKGDQGAPGLDAPCPLGEDGLP 688
Score = 38.9 bits (89), Expect = 0.004
Identities = 19/40 (47%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Query: 59 PMGPPGEMPCPPGNDGLPGAPGIPGECGEKGEPGERGPPG 98
P PG CPP G G PG+PG+ G G PG G PG
Sbjct: 111 PKTSPG-CNCPPAFQGPTGRPGLPGDKGAIGMPGRVGSPG 149
>gi|22027574 alpha 1 type XIII collagen isoform 4 [Homo sapiens]
Length = 698
Score = 87.8 bits (216), Expect = 8e-18
Identities = 45/77 (58%), Positives = 47/77 (61%), Gaps = 7/77 (9%)
Query: 28 GSPGIPGTPGSHGLPGRDGRDGLKGDPGPPGPMGPPGEMPCPPGNDGLPGA------PGI 81
G+PGIPG G GLPG G DG KG G PG MGPPG PPG DG PG PG
Sbjct: 457 GAPGIPGQKGEIGLPGPPGHDGEKGPRGKPGDMGPPGPQG-PPGKDGPPGVKGENGHPGS 515
Query: 82 PGECGEKGEPGERGPPG 98
PGE GEKGE G+ G PG
Sbjct: 516 PGEKGEKGETGQAGSPG 532
Score = 71.6 bits (174), Expect = 6e-13
Identities = 44/98 (44%), Positives = 46/98 (46%), Gaps = 19/98 (19%)
Query: 28 GSPGIPGTPGSHGLPGRDGRDGLKGDPGPPGPMGPPG-----------EMPCPPGNDGLP 76
G PG PG G G PG G G G PGPPGP G PG MP PG G
Sbjct: 254 GPPGPPGPSGPLGHPGLPGPMGPPGLPGPPGPKGDPGIQGYHGRKGERGMPGMPGKHGAK 313
Query: 77 GAPGI--------PGECGEKGEPGERGPPGLPAHLDEE 106
GAPGI PG G KGE G G PGLP L ++
Sbjct: 314 GAPGIAVAGMKGEPGIPGTKGEKGAEGSPGLPGLLGQK 351
Score = 68.9 bits (167), Expect = 4e-12
Identities = 33/74 (44%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
Query: 28 GSPGIPGTPGSHGLPGRDGRDGLKGDPGPPGPMGPPGE--MPCPPGNDGLPGAPGIPGEC 85
G G+PG G GL G G G +G+ G GP+G PG + PG G PG G+PG
Sbjct: 561 GLQGVPGPKGEAGLDGAKGEKGFQGEKGDRGPLGLPGASGLDGRPGPPGTPGPIGVPGPA 620
Query: 86 GEKGEPGERGPPGL 99
G KGE G +G PG+
Sbjct: 621 GPKGERGSKGDPGM 634
Score = 68.2 bits (165), Expect = 6e-12
Identities = 37/79 (46%), Positives = 43/79 (54%), Gaps = 9/79 (11%)
Query: 28 GSPGIPGTPGSHGLPGRDGRDG--------LKGDPGPPGPMGPPGEMPCPPGNDGLPGAP 79
G PG+PG G+ G+PGR G G +G PG PG G PG P P G DG PG P
Sbjct: 128 GRPGLPGDKGAIGMPGRVGSPGDAGLSIIGPRGPPGQPGTRGFPG-FPGPIGLDGKPGHP 186
Query: 80 GIPGECGEKGEPGERGPPG 98
G G+ G G PG+ GP G
Sbjct: 187 GPKGDMGLTGPPGQPGPQG 205
Score = 67.8 bits (164), Expect = 8e-12
Identities = 35/71 (49%), Positives = 39/71 (54%), Gaps = 4/71 (5%)
Query: 28 GSPGIPGTPGSHGLPGRDGRDGLKGDPGPPGPMGPPGEMPCPPGNDGLPGAPGIPGECGE 87
G PG PGTPG G+PG G G +G G PG GP G P GL G PG G GE
Sbjct: 603 GRPGPPGTPGPIGVPGPAGPKGERGSKGDPGMTGPTGAAGLP----GLHGPPGDKGNRGE 658
Query: 88 KGEPGERGPPG 98
+G+ G RGP G
Sbjct: 659 RGKKGSRGPKG 669
Score = 67.0 bits (162), Expect = 1e-11
Identities = 36/74 (48%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Query: 27 VGSPGIPGTPGSHGLPGRDGRDGLKGDPGPPGPMGPPGEMPCPP-GNDGLPGAPGIPGEC 85
+G PG+PG PG G PG G G KG+ G PG G G P G+ G PGIPG
Sbjct: 274 MGPPGLPGPPGPKGDPGIQGYHGRKGERGMPGMPGKHGAKGAPGIAVAGMKGEPGIPGTK 333
Query: 86 GEKGEPGERGPPGL 99
GEKG G G PGL
Sbjct: 334 GEKGAEGSPGLPGL 347
Score = 67.0 bits (162), Expect = 1e-11
Identities = 40/105 (38%), Positives = 45/105 (42%), Gaps = 33/105 (31%)
Query: 27 VGSPGIPGTPGSHGLPGRDGRDGLKGD-------------------------------PG 55
VG PG PG G G G G DG KG PG
Sbjct: 389 VGPPGQPGDKGERGAAGEQGPDGPKGSKGEPGKGEMVDYNGNINEALQEIRTLALMGPPG 448
Query: 56 PPGPMGPPGE--MPCPPGNDGLPGAPGIPGECGEKGEPGERGPPG 98
PG +GPPG +P G GLPG PG GE G +G+PG+ GPPG
Sbjct: 449 LPGQIGPPGAPGIPGQKGEIGLPGPPGHDGEKGPRGKPGDMGPPG 493
Score = 66.6 bits (161), Expect = 2e-11
Identities = 35/71 (49%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Query: 28 GSPGIPGTPGSHGLPGRDGRDGLKGDPGPPGPMGPPGEMPCPPGNDGLPGAPGIPGECGE 87
G G G G GLPG G DG G PG PGP+G PG P G G G PG+ G G
Sbjct: 582 GFQGEKGDRGPLGLPGASGLDGRPGPPGTPGPIGVPGPAG-PKGERGSKGDPGMTGPTGA 640
Query: 88 KGEPGERGPPG 98
G PG GPPG
Sbjct: 641 AGLPGLHGPPG 651
Score = 65.1 bits (157), Expect = 5e-11
Identities = 48/140 (34%), Positives = 59/140 (42%), Gaps = 30/140 (21%)
Query: 28 GSPGIP--GTPGSHGLPGRDGRDGLKGDPGPPGPMGPPGE-------MPCPPGNDGLPGA 78
G+PGI G G G+PG G G +G PG PG +G GE + G G PG
Sbjct: 314 GAPGIAVAGMKGEPGIPGTKGEKGAEGSPGLPGLLGQKGEKGDAGNSIGGGRGEPGPPGL 373
Query: 79 PGIPGECGEKGEPGERGPPGLPAHLDEELQATLHDFRHQILQTRGALSLQGSIMTVGEKV 138
PG PG GE G G+ GPPG P E RGA QG G K
Sbjct: 374 PGPPGPKGEAGVDGQVGPPGQPGDKGE----------------RGAAGEQGPDGPKGSKG 417
Query: 139 FSSNGQSITF-----DAIQE 153
G+ + + +A+QE
Sbjct: 418 EPGKGEMVDYNGNINEALQE 437
Score = 64.3 bits (155), Expect = 9e-11
Identities = 39/89 (43%), Positives = 41/89 (46%), Gaps = 12/89 (13%)
Query: 20 CEVKDVCVGSPGIPGTPGSHGLPGRDGRDGLKGDPGPP--GPMGPPGEMPCPPGNDGLPG 77
C G G PG PG G G GR G GD G GP GPPG+ PG G PG
Sbjct: 117 CNCPPAFQGPTGRPGLPGDKGAIGMPGRVGSPGDAGLSIIGPRGPPGQ----PGTRGFPG 172
Query: 78 AP------GIPGECGEKGEPGERGPPGLP 100
P G PG G KG+ G GPPG P
Sbjct: 173 FPGPIGLDGKPGHPGPKGDMGLTGPPGQP 201
Score = 62.4 bits (150), Expect = 3e-10
Identities = 37/95 (38%), Positives = 42/95 (44%), Gaps = 22/95 (23%)
Query: 28 GSPGIPGTPGSHGLPGRDGRDGLKGDPGPPGPMGPPGE----------MPCPPGNDGLPG 77
G PG+ G G G PG G G G G PG G GE +P P G G PG
Sbjct: 502 GPPGVKGENGHPGSPGEKGEKGETGQAGSPGEKGEAGEKGNPGAEVPGLPGPEGPPGPPG 561
Query: 78 APGIPGECGE------------KGEPGERGPPGLP 100
G+PG GE +GE G+RGP GLP
Sbjct: 562 LQGVPGPKGEAGLDGAKGEKGFQGEKGDRGPLGLP 596
Score = 60.8 bits (146), Expect = 1e-09
Identities = 43/121 (35%), Positives = 48/121 (39%), Gaps = 45/121 (37%)
Query: 28 GSPGIPGTPGSHGLPGRDGRDGLKGDP------------GPPGPMGPPGE---------- 65
G PG+PG PG G G DG+ G G P GP GP G GE
Sbjct: 369 GPPGLPGPPGPKGEAGVDGQVGPPGQPGDKGERGAAGEQGPDGPKGSKGEPGKGEMVDYN 428
Query: 66 -----------------MPCPPGNDGLPGAPGIPGECGEKGEP------GERGPPGLPAH 102
P PG G PGAPGIPG+ GE G P GE+GP G P
Sbjct: 429 GNINEALQEIRTLALMGPPGLPGQIGPPGAPGIPGQKGEIGLPGPPGHDGEKGPRGKPGD 488
Query: 103 L 103
+
Sbjct: 489 M 489
Score = 60.5 bits (145), Expect = 1e-09
Identities = 30/61 (49%), Positives = 34/61 (55%), Gaps = 1/61 (1%)
Query: 27 VGSPGIPGTPGSHGLPGRDGRDGLKGDPGPPGPMGPPGEMPCPPGNDGLPGAPGIPGECG 86
+G G PG PG+ G PG G GL G PG PGP G G + PPG G G G G+CG
Sbjct: 156 IGPRGPPGQPGTRGFPGFPGPIGLDGKPGHPGPKGDMG-LTGPPGQPGPQGQKGEKGQCG 214
Query: 87 E 87
E
Sbjct: 215 E 215
Score = 59.7 bits (143), Expect = 2e-09
Identities = 32/70 (45%), Positives = 39/70 (55%), Gaps = 16/70 (22%)
Query: 43 GRDGRDGLKGDPGPPGPMGPPGEMPCPPGNDGLP---GAPGIPGECGEKGEP-------- 91
G + ++G PGPPGP GP G P G+ GLP G PG+PG G KG+P
Sbjct: 242 GEQSQASIQGPPGPPGPPGPSG----PLGHPGLPGPMGPPGLPGPPGPKGDPGIQGYHGR 297
Query: 92 -GERGPPGLP 100
GERG PG+P
Sbjct: 298 KGERGMPGMP 307
Score = 58.5 bits (140), Expect = 5e-09
Identities = 33/77 (42%), Positives = 36/77 (46%), Gaps = 7/77 (9%)
Query: 29 SPGIPGTPGSHGLPGRDGRDGLKGDPGPPGPMGPPGEMPC-------PPGNDGLPGAPGI 81
SPG P G GR G G KG G PG +G PG+ PPG G G PG
Sbjct: 114 SPGCNCPPAFQGPTGRPGLPGDKGAIGMPGRVGSPGDAGLSIIGPRGPPGQPGTRGFPGF 173
Query: 82 PGECGEKGEPGERGPPG 98
PG G G+PG GP G
Sbjct: 174 PGPIGLDGKPGHPGPKG 190
Score = 58.2 bits (139), Expect = 7e-09
Identities = 40/107 (37%), Positives = 45/107 (42%), Gaps = 34/107 (31%)
Query: 28 GSPGIPGTPGSHGLPGRDGRDGLKGD--------------PGPPGPMGPPG--EMPCPPG 71
G PG PG G G G+ G G KG+ PGP GP GPPG +P P G
Sbjct: 511 GHPGSPGEKGEKGETGQAGSPGEKGEAGEKGNPGAEVPGLPGPEGPPGPPGLQGVPGPKG 570
Query: 72 NDGLPGAPGIPGECGEKGE------------------PGERGPPGLP 100
GL GA G G GEKG+ PG GP G+P
Sbjct: 571 EAGLDGAKGEKGFQGEKGDRGPLGLPGASGLDGRPGPPGTPGPIGVP 617
Score = 49.3 bits (116), Expect = 3e-06
Identities = 25/56 (44%), Positives = 27/56 (48%), Gaps = 7/56 (12%)
Query: 28 GSPGIPGTPGSHGLPGRDGRDGLKGDPGPPGPMGPPGEM-------PCPPGNDGLP 76
G G G PG HG PG G G +G G GP G G+ PCP G DGLP
Sbjct: 636 GPTGAAGLPGLHGPPGDKGNRGERGKKGSRGPKGDKGDQGAPGLDAPCPLGEDGLP 691
Score = 38.9 bits (89), Expect = 0.004
Identities = 19/40 (47%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Query: 59 PMGPPGEMPCPPGNDGLPGAPGIPGECGEKGEPGERGPPG 98
P PG CPP G G PG+PG+ G G PG G PG
Sbjct: 111 PKTSPG-CNCPPAFQGPTGRPGLPGDKGAIGMPGRVGSPG 149
>gi|22027571 alpha 1 type XIII collagen isoform 3 [Homo sapiens]
Length = 700
Score = 87.8 bits (216), Expect = 8e-18
Identities = 45/77 (58%), Positives = 47/77 (61%), Gaps = 7/77 (9%)
Query: 28 GSPGIPGTPGSHGLPGRDGRDGLKGDPGPPGPMGPPGEMPCPPGNDGLPGA------PGI 81
G+PGIPG G GLPG G DG KG G PG MGPPG PPG DG PG PG
Sbjct: 459 GAPGIPGQKGEIGLPGPPGHDGEKGPRGKPGDMGPPGPQG-PPGKDGPPGVKGENGHPGS 517
Query: 82 PGECGEKGEPGERGPPG 98
PGE GEKGE G+ G PG
Sbjct: 518 PGEKGEKGETGQAGSPG 534
Score = 73.6 bits (179), Expect = 2e-13
Identities = 36/70 (51%), Positives = 46/70 (65%), Gaps = 2/70 (2%)
Query: 28 GSPGIPGTPGSHGLPGRDGRDGLKGDPGPPGPMGPPGE--MPCPPGNDGLPGAPGIPGEC 85
G PG+PG G+ G+PGR G+ G +G PG PGP+G G+ P P G+ GL G PG PG
Sbjct: 128 GRPGLPGDKGAIGMPGRVGQPGTRGFPGFPGPIGLDGKPGHPGPKGDMGLTGPPGQPGPQ 187
Query: 86 GEKGEPGERG 95
G+KGE G+ G
Sbjct: 188 GQKGEKGQCG 197
Score = 71.6 bits (174), Expect = 6e-13
Identities = 44/98 (44%), Positives = 46/98 (46%), Gaps = 19/98 (19%)
Query: 28 GSPGIPGTPGSHGLPGRDGRDGLKGDPGPPGPMGPPG-----------EMPCPPGNDGLP 76
G PG PG G G PG G G G PGPPGP G PG MP PG G
Sbjct: 256 GPPGPPGPSGPLGHPGLPGPMGPPGLPGPPGPKGDPGIQGYHGRKGERGMPGMPGKHGAK 315
Query: 77 GAPGI--------PGECGEKGEPGERGPPGLPAHLDEE 106
GAPGI PG G KGE G G PGLP L ++
Sbjct: 316 GAPGIAVAGMKGEPGIPGTKGEKGAEGSPGLPGLLGQK 353
Score = 68.9 bits (167), Expect = 4e-12
Identities = 33/74 (44%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
Query: 28 GSPGIPGTPGSHGLPGRDGRDGLKGDPGPPGPMGPPGE--MPCPPGNDGLPGAPGIPGEC 85
G G+PG G GL G G G +G+ G GP+G PG + PG G PG G+PG
Sbjct: 563 GLQGVPGPKGEAGLDGAKGEKGFQGEKGDRGPLGLPGASGLDGRPGPPGTPGPIGVPGPA 622
Query: 86 GEKGEPGERGPPGL 99
G KGE G +G PG+
Sbjct: 623 GPKGERGSKGDPGM 636
Score = 67.8 bits (164), Expect = 8e-12
Identities = 35/71 (49%), Positives = 39/71 (54%), Gaps = 4/71 (5%)
Query: 28 GSPGIPGTPGSHGLPGRDGRDGLKGDPGPPGPMGPPGEMPCPPGNDGLPGAPGIPGECGE 87
G PG PGTPG G+PG G G +G G PG GP G P GL G PG G GE
Sbjct: 605 GRPGPPGTPGPIGVPGPAGPKGERGSKGDPGMTGPTGAAGLP----GLHGPPGDKGNRGE 660
Query: 88 KGEPGERGPPG 98
+G+ G RGP G
Sbjct: 661 RGKKGSRGPKG 671
Score = 67.0 bits (162), Expect = 1e-11
Identities = 36/74 (48%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Query: 27 VGSPGIPGTPGSHGLPGRDGRDGLKGDPGPPGPMGPPGEMPCPP-GNDGLPGAPGIPGEC 85
+G PG+PG PG G PG G G KG+ G PG G G P G+ G PGIPG
Sbjct: 276 MGPPGLPGPPGPKGDPGIQGYHGRKGERGMPGMPGKHGAKGAPGIAVAGMKGEPGIPGTK 335
Query: 86 GEKGEPGERGPPGL 99
GEKG G G PGL
Sbjct: 336 GEKGAEGSPGLPGL 349
Score = 67.0 bits (162), Expect = 1e-11
Identities = 40/105 (38%), Positives = 45/105 (42%), Gaps = 33/105 (31%)
Query: 27 VGSPGIPGTPGSHGLPGRDGRDGLKGD-------------------------------PG 55
VG PG PG G G G G DG KG PG
Sbjct: 391 VGPPGQPGDKGERGAAGEQGPDGPKGSKGEPGKGEMVDYNGNINEALQEIRTLALMGPPG 450
Query: 56 PPGPMGPPGE--MPCPPGNDGLPGAPGIPGECGEKGEPGERGPPG 98
PG +GPPG +P G GLPG PG GE G +G+PG+ GPPG
Sbjct: 451 LPGQIGPPGAPGIPGQKGEIGLPGPPGHDGEKGPRGKPGDMGPPG 495
Score = 66.6 bits (161), Expect = 2e-11
Identities = 35/71 (49%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Query: 28 GSPGIPGTPGSHGLPGRDGRDGLKGDPGPPGPMGPPGEMPCPPGNDGLPGAPGIPGECGE 87
G G G G GLPG G DG G PG PGP+G PG P G G G PG+ G G
Sbjct: 584 GFQGEKGDRGPLGLPGASGLDGRPGPPGTPGPIGVPGPAG-PKGERGSKGDPGMTGPTGA 642
Query: 88 KGEPGERGPPG 98
G PG GPPG
Sbjct: 643 AGLPGLHGPPG 653
Score = 65.1 bits (157), Expect = 5e-11
Identities = 48/140 (34%), Positives = 59/140 (42%), Gaps = 30/140 (21%)
Query: 28 GSPGIP--GTPGSHGLPGRDGRDGLKGDPGPPGPMGPPGE-------MPCPPGNDGLPGA 78
G+PGI G G G+PG G G +G PG PG +G GE + G G PG
Sbjct: 316 GAPGIAVAGMKGEPGIPGTKGEKGAEGSPGLPGLLGQKGEKGDAGNSIGGGRGEPGPPGL 375
Query: 79 PGIPGECGEKGEPGERGPPGLPAHLDEELQATLHDFRHQILQTRGALSLQGSIMTVGEKV 138
PG PG GE G G+ GPPG P E RGA QG G K
Sbjct: 376 PGPPGPKGEAGVDGQVGPPGQPGDKGE----------------RGAAGEQGPDGPKGSKG 419
Query: 139 FSSNGQSITF-----DAIQE 153
G+ + + +A+QE
Sbjct: 420 EPGKGEMVDYNGNINEALQE 439
Score = 62.4 bits (150), Expect = 3e-10
Identities = 41/113 (36%), Positives = 48/113 (42%), Gaps = 40/113 (35%)
Query: 28 GSPGIPGTPGSHGLPGRDGRDGLKGDPGPPGP------------MGPPGE---------- 65
G PG G PG G PG+DG G+KG+ G PG G PGE
Sbjct: 486 GKPGDMGPPGPQGPPGKDGPPGVKGENGHPGSPGEKGEKGETGQAGSPGEKGEAGEKGNP 545
Query: 66 ------MPCPPGNDGLPGAPGIPGECGE------------KGEPGERGPPGLP 100
+P P G G PG G+PG GE +GE G+RGP GLP
Sbjct: 546 GAEVPGLPGPEGPPGPPGLQGVPGPKGEAGLDGAKGEKGFQGEKGDRGPLGLP 598
Score = 60.8 bits (146), Expect = 1e-09
Identities = 43/121 (35%), Positives = 48/121 (39%), Gaps = 45/121 (37%)
Query: 28 GSPGIPGTPGSHGLPGRDGRDGLKGDP------------GPPGPMGPPGE---------- 65
G PG+PG PG G G DG+ G G P GP GP G GE
Sbjct: 371 GPPGLPGPPGPKGEAGVDGQVGPPGQPGDKGERGAAGEQGPDGPKGSKGEPGKGEMVDYN 430
Query: 66 -----------------MPCPPGNDGLPGAPGIPGECGEKGEP------GERGPPGLPAH 102
P PG G PGAPGIPG+ GE G P GE+GP G P
Sbjct: 431 GNINEALQEIRTLALMGPPGLPGQIGPPGAPGIPGQKGEIGLPGPPGHDGEKGPRGKPGD 490
Query: 103 L 103
+
Sbjct: 491 M 491
Score = 60.5 bits (145), Expect = 1e-09
Identities = 30/61 (49%), Positives = 34/61 (55%), Gaps = 1/61 (1%)
Query: 27 VGSPGIPGTPGSHGLPGRDGRDGLKGDPGPPGPMGPPGEMPCPPGNDGLPGAPGIPGECG 86
+G PG G PG+ G PG G GL G PG PGP G G + PPG G G G G+CG
Sbjct: 139 IGMPGRVGQPGTRGFPGFPGPIGLDGKPGHPGPKGDMG-LTGPPGQPGPQGQKGEKGQCG 197
Query: 87 E 87
E
Sbjct: 198 E 198
Score = 59.7 bits (143), Expect = 2e-09
Identities = 32/70 (45%), Positives = 39/70 (55%), Gaps = 16/70 (22%)
Query: 43 GRDGRDGLKGDPGPPGPMGPPGEMPCPPGNDGLP---GAPGIPGECGEKGEP-------- 91
G + ++G PGPPGP GP G P G+ GLP G PG+PG G KG+P
Sbjct: 244 GEQSQASIQGPPGPPGPPGPSG----PLGHPGLPGPMGPPGLPGPPGPKGDPGIQGYHGR 299
Query: 92 -GERGPPGLP 100
GERG PG+P
Sbjct: 300 KGERGMPGMP 309
Score = 58.9 bits (141), Expect = 4e-09
Identities = 34/75 (45%), Positives = 37/75 (49%), Gaps = 5/75 (6%)
Query: 29 SPGIPGTPGSHGLPGRDGRDGLKGDPGPPGPMGPPGE-----MPCPPGNDGLPGAPGIPG 83
SPG P G GR G G KG G PG +G PG P P G DG PG PG G
Sbjct: 114 SPGCNCPPAFQGPTGRPGLPGDKGAIGMPGRVGQPGTRGFPGFPGPIGLDGKPGHPGPKG 173
Query: 84 ECGEKGEPGERGPPG 98
+ G G PG+ GP G
Sbjct: 174 DMGLTGPPGQPGPQG 188
Score = 58.2 bits (139), Expect = 7e-09
Identities = 40/107 (37%), Positives = 45/107 (42%), Gaps = 34/107 (31%)
Query: 28 GSPGIPGTPGSHGLPGRDGRDGLKGD--------------PGPPGPMGPPG--EMPCPPG 71
G PG PG G G G+ G G KG+ PGP GP GPPG +P P G
Sbjct: 513 GHPGSPGEKGEKGETGQAGSPGEKGEAGEKGNPGAEVPGLPGPEGPPGPPGLQGVPGPKG 572
Query: 72 NDGLPGAPGIPGECGEKGE------------------PGERGPPGLP 100
GL GA G G GEKG+ PG GP G+P
Sbjct: 573 EAGLDGAKGEKGFQGEKGDRGPLGLPGASGLDGRPGPPGTPGPIGVP 619
Score = 49.3 bits (116), Expect = 3e-06
Identities = 25/56 (44%), Positives = 27/56 (48%), Gaps = 7/56 (12%)
Query: 28 GSPGIPGTPGSHGLPGRDGRDGLKGDPGPPGPMGPPGEM-------PCPPGNDGLP 76
G G G PG HG PG G G +G G GP G G+ PCP G DGLP
Sbjct: 638 GPTGAAGLPGLHGPPGDKGNRGERGKKGSRGPKGDKGDQGAPGLDAPCPLGEDGLP 693
Score = 48.9 bits (115), Expect = 4e-06
Identities = 41/134 (30%), Positives = 44/134 (32%), Gaps = 61/134 (45%)
Query: 28 GSPGIPGTPGSHGLPGRDGRDGLKGD---------PGPPGPMGPPGE------------M 66
G+ G PG PG GL G+ G G KGD PGP G G G+ M
Sbjct: 149 GTRGFPGFPGPIGLDGKPGHPGPKGDMGLTGPPGQPGPQGQKGEKGQCGEYPHRECLSSM 208
Query: 67 P----------------------CPP------------------GNDGLPGAPGIPGECG 86
P PP G G PG PG G G
Sbjct: 209 PAALRSSQIIALKLLPLLNSVRLAPPPVIKRRTFQGEQSQASIQGPPGPPGPPGPSGPLG 268
Query: 87 EKGEPGERGPPGLP 100
G PG GPPGLP
Sbjct: 269 HPGLPGPMGPPGLP 282
Score = 42.4 bits (98), Expect = 4e-04
Identities = 29/68 (42%), Positives = 33/68 (48%), Gaps = 7/68 (10%)
Query: 41 LPGRDGRDGLKGDPG---PPGPMGPPGEMPCPPGNDGLPGAPGIPGECGEKGEPGERGPP 97
L R R+ K PG PP GP G P PG+ G G PG G+ G +G PG GP
Sbjct: 102 LHSRRRREAPKTSPGCNCPPAFQGPTGR-PGLPGDKGAIGMPGRVGQPGTRGFPGFPGPI 160
Query: 98 GL---PAH 102
GL P H
Sbjct: 161 GLDGKPGH 168
>gi|22027568 alpha 1 type XIII collagen isoform 2 [Homo sapiens]
Length = 705
Score = 87.8 bits (216), Expect = 8e-18
Identities = 45/77 (58%), Positives = 47/77 (61%), Gaps = 7/77 (9%)
Query: 28 GSPGIPGTPGSHGLPGRDGRDGLKGDPGPPGPMGPPGEMPCPPGNDGLPGA------PGI 81
G+PGIPG G GLPG G DG KG G PG MGPPG PPG DG PG PG
Sbjct: 464 GAPGIPGQKGEIGLPGPPGHDGEKGPRGKPGDMGPPGPQG-PPGKDGPPGVKGENGHPGS 522
Query: 82 PGECGEKGEPGERGPPG 98
PGE GEKGE G+ G PG
Sbjct: 523 PGEKGEKGETGQAGSPG 539
Score = 71.6 bits (174), Expect = 6e-13
Identities = 44/98 (44%), Positives = 46/98 (46%), Gaps = 19/98 (19%)
Query: 28 GSPGIPGTPGSHGLPGRDGRDGLKGDPGPPGPMGPPG-----------EMPCPPGNDGLP 76
G PG PG G G PG G G G PGPPGP G PG MP PG G
Sbjct: 261 GPPGPPGPSGPLGHPGLPGPMGPPGLPGPPGPKGDPGIQGYHGRKGERGMPGMPGKHGAK 320
Query: 77 GAPGI--------PGECGEKGEPGERGPPGLPAHLDEE 106
GAPGI PG G KGE G G PGLP L ++
Sbjct: 321 GAPGIAVAGMKGEPGIPGTKGEKGAEGSPGLPGLLGQK 358
Score = 68.9 bits (167), Expect = 4e-12
Identities = 33/74 (44%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
Query: 28 GSPGIPGTPGSHGLPGRDGRDGLKGDPGPPGPMGPPGE--MPCPPGNDGLPGAPGIPGEC 85
G G+PG G GL G G G +G+ G GP+G PG + PG G PG G+PG
Sbjct: 568 GLQGVPGPKGEAGLDGAKGEKGFQGEKGDRGPLGLPGASGLDGRPGPPGTPGPIGVPGPA 627
Query: 86 GEKGEPGERGPPGL 99
G KGE G +G PG+
Sbjct: 628 GPKGERGSKGDPGM 641
Score = 67.8 bits (164), Expect = 8e-12
Identities = 37/76 (48%), Positives = 43/76 (56%), Gaps = 9/76 (11%)
Query: 28 GSPGIPGTPGSHGL--------PGRDGRDGLKGDPGPPGPMGPPGEMPCPPGNDGLPGAP 79
G PG+PG+PG GL PG+ G G G PGP G G PG P P G+ GL G P
Sbjct: 128 GRPGLPGSPGDAGLSIIGPRGPPGQPGTRGFPGFPGPIGLDGKPGH-PGPKGDMGLTGPP 186
Query: 80 GIPGECGEKGEPGERG 95
G PG G+KGE G+ G
Sbjct: 187 GQPGPQGQKGEKGQCG 202
Score = 67.8 bits (164), Expect = 8e-12
Identities = 35/71 (49%), Positives = 39/71 (54%), Gaps = 4/71 (5%)
Query: 28 GSPGIPGTPGSHGLPGRDGRDGLKGDPGPPGPMGPPGEMPCPPGNDGLPGAPGIPGECGE 87
G PG PGTPG G+PG G G +G G PG GP G P GL G PG G GE
Sbjct: 610 GRPGPPGTPGPIGVPGPAGPKGERGSKGDPGMTGPTGAAGLP----GLHGPPGDKGNRGE 665
Query: 88 KGEPGERGPPG 98
+G+ G RGP G
Sbjct: 666 RGKKGSRGPKG 676
Score = 67.0 bits (162), Expect = 1e-11
Identities = 36/74 (48%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Query: 27 VGSPGIPGTPGSHGLPGRDGRDGLKGDPGPPGPMGPPGEMPCPP-GNDGLPGAPGIPGEC 85
+G PG+PG PG G PG G G KG+ G PG G G P G+ G PGIPG
Sbjct: 281 MGPPGLPGPPGPKGDPGIQGYHGRKGERGMPGMPGKHGAKGAPGIAVAGMKGEPGIPGTK 340
Query: 86 GEKGEPGERGPPGL 99
GEKG G G PGL
Sbjct: 341 GEKGAEGSPGLPGL 354
Score = 67.0 bits (162), Expect = 1e-11
Identities = 40/105 (38%), Positives = 45/105 (42%), Gaps = 33/105 (31%)
Query: 27 VGSPGIPGTPGSHGLPGRDGRDGLKGD-------------------------------PG 55
VG PG PG G G G G DG KG PG
Sbjct: 396 VGPPGQPGDKGERGAAGEQGPDGPKGSKGEPGKGEMVDYNGNINEALQEIRTLALMGPPG 455
Query: 56 PPGPMGPPGE--MPCPPGNDGLPGAPGIPGECGEKGEPGERGPPG 98
PG +GPPG +P G GLPG PG GE G +G+PG+ GPPG
Sbjct: 456 LPGQIGPPGAPGIPGQKGEIGLPGPPGHDGEKGPRGKPGDMGPPG 500
Score = 66.6 bits (161), Expect = 2e-11
Identities = 35/71 (49%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Query: 28 GSPGIPGTPGSHGLPGRDGRDGLKGDPGPPGPMGPPGEMPCPPGNDGLPGAPGIPGECGE 87
G G G G GLPG G DG G PG PGP+G PG P G G G PG+ G G
Sbjct: 589 GFQGEKGDRGPLGLPGASGLDGRPGPPGTPGPIGVPGPAG-PKGERGSKGDPGMTGPTGA 647
Query: 88 KGEPGERGPPG 98
G PG GPPG
Sbjct: 648 AGLPGLHGPPG 658
Score = 65.1 bits (157), Expect = 5e-11
Identities = 48/140 (34%), Positives = 59/140 (42%), Gaps = 30/140 (21%)
Query: 28 GSPGIP--GTPGSHGLPGRDGRDGLKGDPGPPGPMGPPGE-------MPCPPGNDGLPGA 78
G+PGI G G G+PG G G +G PG PG +G GE + G G PG
Sbjct: 321 GAPGIAVAGMKGEPGIPGTKGEKGAEGSPGLPGLLGQKGEKGDAGNSIGGGRGEPGPPGL 380
Query: 79 PGIPGECGEKGEPGERGPPGLPAHLDEELQATLHDFRHQILQTRGALSLQGSIMTVGEKV 138
PG PG GE G G+ GPPG P E RGA QG G K
Sbjct: 381 PGPPGPKGEAGVDGQVGPPGQPGDKGE----------------RGAAGEQGPDGPKGSKG 424
Query: 139 FSSNGQSITF-----DAIQE 153
G+ + + +A+QE
Sbjct: 425 EPGKGEMVDYNGNINEALQE 444
Score = 62.4 bits (150), Expect = 3e-10
Identities = 37/95 (38%), Positives = 42/95 (44%), Gaps = 22/95 (23%)
Query: 28 GSPGIPGTPGSHGLPGRDGRDGLKGDPGPPGPMGPPGE----------MPCPPGNDGLPG 77
G PG+ G G G PG G G G G PG G GE +P P G G PG
Sbjct: 509 GPPGVKGENGHPGSPGEKGEKGETGQAGSPGEKGEAGEKGNPGAEVPGLPGPEGPPGPPG 568
Query: 78 APGIPGECGE------------KGEPGERGPPGLP 100
G+PG GE +GE G+RGP GLP
Sbjct: 569 LQGVPGPKGEAGLDGAKGEKGFQGEKGDRGPLGLP 603
Score = 60.8 bits (146), Expect = 1e-09
Identities = 43/121 (35%), Positives = 48/121 (39%), Gaps = 45/121 (37%)
Query: 28 GSPGIPGTPGSHGLPGRDGRDGLKGDP------------GPPGPMGPPGE---------- 65
G PG+PG PG G G DG+ G G P GP GP G GE
Sbjct: 376 GPPGLPGPPGPKGEAGVDGQVGPPGQPGDKGERGAAGEQGPDGPKGSKGEPGKGEMVDYN 435
Query: 66 -----------------MPCPPGNDGLPGAPGIPGECGEKGEP------GERGPPGLPAH 102
P PG G PGAPGIPG+ GE G P GE+GP G P
Sbjct: 436 GNINEALQEIRTLALMGPPGLPGQIGPPGAPGIPGQKGEIGLPGPPGHDGEKGPRGKPGD 495
Query: 103 L 103
+
Sbjct: 496 M 496
Score = 60.5 bits (145), Expect = 1e-09
Identities = 30/61 (49%), Positives = 34/61 (55%), Gaps = 1/61 (1%)
Query: 27 VGSPGIPGTPGSHGLPGRDGRDGLKGDPGPPGPMGPPGEMPCPPGNDGLPGAPGIPGECG 86
+G G PG PG+ G PG G GL G PG PGP G G + PPG G G G G+CG
Sbjct: 144 IGPRGPPGQPGTRGFPGFPGPIGLDGKPGHPGPKGDMG-LTGPPGQPGPQGQKGEKGQCG 202
Query: 87 E 87
E
Sbjct: 203 E 203
Score = 59.7 bits (143), Expect = 2e-09
Identities = 32/70 (45%), Positives = 39/70 (55%), Gaps = 16/70 (22%)
Query: 43 GRDGRDGLKGDPGPPGPMGPPGEMPCPPGNDGLP---GAPGIPGECGEKGEP-------- 91
G + ++G PGPPGP GP G P G+ GLP G PG+PG G KG+P
Sbjct: 249 GEQSQASIQGPPGPPGPPGPSG----PLGHPGLPGPMGPPGLPGPPGPKGDPGIQGYHGR 304
Query: 92 -GERGPPGLP 100
GERG PG+P
Sbjct: 305 KGERGMPGMP 314
Score = 58.2 bits (139), Expect = 7e-09
Identities = 40/107 (37%), Positives = 45/107 (42%), Gaps = 34/107 (31%)
Query: 28 GSPGIPGTPGSHGLPGRDGRDGLKGD--------------PGPPGPMGPPG--EMPCPPG 71
G PG PG G G G+ G G KG+ PGP GP GPPG +P P G
Sbjct: 518 GHPGSPGEKGEKGETGQAGSPGEKGEAGEKGNPGAEVPGLPGPEGPPGPPGLQGVPGPKG 577
Query: 72 NDGLPGAPGIPGECGEKGE------------------PGERGPPGLP 100
GL GA G G GEKG+ PG GP G+P
Sbjct: 578 EAGLDGAKGEKGFQGEKGDRGPLGLPGASGLDGRPGPPGTPGPIGVP 624
Score = 57.8 bits (138), Expect = 9e-09
Identities = 36/80 (45%), Positives = 38/80 (47%), Gaps = 12/80 (15%)
Query: 29 SPGIPGTPGSHGLPGRDGRDGLKGDPGPP--GPMGPPGEMPCPPGNDGLPGAP------G 80
SPG P G GR G G GD G GP GPPG+ PG G PG P G
Sbjct: 114 SPGCNCPPAFQGPTGRPGLPGSPGDAGLSIIGPRGPPGQ----PGTRGFPGFPGPIGLDG 169
Query: 81 IPGECGEKGEPGERGPPGLP 100
PG G KG+ G GPPG P
Sbjct: 170 KPGHPGPKGDMGLTGPPGQP 189
Score = 49.3 bits (116), Expect = 3e-06
Identities = 25/56 (44%), Positives = 27/56 (48%), Gaps = 7/56 (12%)
Query: 28 GSPGIPGTPGSHGLPGRDGRDGLKGDPGPPGPMGPPGEM-------PCPPGNDGLP 76
G G G PG HG PG G G +G G GP G G+ PCP G DGLP
Sbjct: 643 GPTGAAGLPGLHGPPGDKGNRGERGKKGSRGPKGDKGDQGAPGLDAPCPLGEDGLP 698
Score = 48.9 bits (115), Expect = 4e-06
Identities = 41/134 (30%), Positives = 44/134 (32%), Gaps = 61/134 (45%)
Query: 28 GSPGIPGTPGSHGLPGRDGRDGLKGD---------PGPPGPMGPPGE------------M 66
G+ G PG PG GL G+ G G KGD PGP G G G+ M
Sbjct: 154 GTRGFPGFPGPIGLDGKPGHPGPKGDMGLTGPPGQPGPQGQKGEKGQCGEYPHRECLSSM 213
Query: 67 P----------------------CPP------------------GNDGLPGAPGIPGECG 86
P PP G G PG PG G G
Sbjct: 214 PAALRSSQIIALKLLPLLNSVRLAPPPVIKRRTFQGEQSQASIQGPPGPPGPPGPSGPLG 273
Query: 87 EKGEPGERGPPGLP 100
G PG GPPGLP
Sbjct: 274 HPGLPGPMGPPGLP 287
>gi|22027565 alpha 1 type XIII collagen isoform 1 [Homo sapiens]
Length = 717
Score = 87.8 bits (216), Expect = 8e-18
Identities = 45/77 (58%), Positives = 47/77 (61%), Gaps = 7/77 (9%)
Query: 28 GSPGIPGTPGSHGLPGRDGRDGLKGDPGPPGPMGPPGEMPCPPGNDGLPGA------PGI 81
G+PGIPG G GLPG G DG KG G PG MGPPG PPG DG PG PG
Sbjct: 476 GAPGIPGQKGEIGLPGPPGHDGEKGPRGKPGDMGPPGPQG-PPGKDGPPGVKGENGHPGS 534
Query: 82 PGECGEKGEPGERGPPG 98
PGE GEKGE G+ G PG
Sbjct: 535 PGEKGEKGETGQAGSPG 551
Score = 71.6 bits (174), Expect = 6e-13
Identities = 44/98 (44%), Positives = 46/98 (46%), Gaps = 19/98 (19%)
Query: 28 GSPGIPGTPGSHGLPGRDGRDGLKGDPGPPGPMGPPG-----------EMPCPPGNDGLP 76
G PG PG G G PG G G G PGPPGP G PG MP PG G
Sbjct: 273 GPPGPPGPSGPLGHPGLPGPMGPPGLPGPPGPKGDPGIQGYHGRKGERGMPGMPGKHGAK 332
Query: 77 GAPGI--------PGECGEKGEPGERGPPGLPAHLDEE 106
GAPGI PG G KGE G G PGLP L ++
Sbjct: 333 GAPGIAVAGMKGEPGIPGTKGEKGAEGSPGLPGLLGQK 370
Score = 68.9 bits (167), Expect = 4e-12
Identities = 33/74 (44%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
Query: 28 GSPGIPGTPGSHGLPGRDGRDGLKGDPGPPGPMGPPGE--MPCPPGNDGLPGAPGIPGEC 85
G G+PG G GL G G G +G+ G GP+G PG + PG G PG G+PG
Sbjct: 580 GLQGVPGPKGEAGLDGAKGEKGFQGEKGDRGPLGLPGASGLDGRPGPPGTPGPIGVPGPA 639
Query: 86 GEKGEPGERGPPGL 99
G KGE G +G PG+
Sbjct: 640 GPKGERGSKGDPGM 653
Score = 68.2 bits (165), Expect = 6e-12
Identities = 37/79 (46%), Positives = 43/79 (54%), Gaps = 9/79 (11%)
Query: 28 GSPGIPGTPGSHGLPGRDGRDG--------LKGDPGPPGPMGPPGEMPCPPGNDGLPGAP 79
G PG+PG G+ G+PGR G G +G PG PG G PG P P G DG PG P
Sbjct: 128 GRPGLPGDKGAIGMPGRVGSPGDAGLSIIGPRGPPGQPGTRGFPG-FPGPIGLDGKPGHP 186
Query: 80 GIPGECGEKGEPGERGPPG 98
G G+ G G PG+ GP G
Sbjct: 187 GPKGDMGLTGPPGQPGPQG 205
Score = 67.8 bits (164), Expect = 8e-12
Identities = 35/71 (49%), Positives = 39/71 (54%), Gaps = 4/71 (5%)
Query: 28 GSPGIPGTPGSHGLPGRDGRDGLKGDPGPPGPMGPPGEMPCPPGNDGLPGAPGIPGECGE 87
G PG PGTPG G+PG G G +G G PG GP G P GL G PG G GE
Sbjct: 622 GRPGPPGTPGPIGVPGPAGPKGERGSKGDPGMTGPTGAAGLP----GLHGPPGDKGNRGE 677
Query: 88 KGEPGERGPPG 98
+G+ G RGP G
Sbjct: 678 RGKKGSRGPKG 688
Score = 67.0 bits (162), Expect = 1e-11
Identities = 36/74 (48%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Query: 27 VGSPGIPGTPGSHGLPGRDGRDGLKGDPGPPGPMGPPGEMPCPP-GNDGLPGAPGIPGEC 85
+G PG+PG PG G PG G G KG+ G PG G G P G+ G PGIPG
Sbjct: 293 MGPPGLPGPPGPKGDPGIQGYHGRKGERGMPGMPGKHGAKGAPGIAVAGMKGEPGIPGTK 352
Query: 86 GEKGEPGERGPPGL 99
GEKG G G PGL
Sbjct: 353 GEKGAEGSPGLPGL 366
Score = 67.0 bits (162), Expect = 1e-11
Identities = 40/105 (38%), Positives = 45/105 (42%), Gaps = 33/105 (31%)
Query: 27 VGSPGIPGTPGSHGLPGRDGRDGLKGD-------------------------------PG 55
VG PG PG G G G G DG KG PG
Sbjct: 408 VGPPGQPGDKGERGAAGEQGPDGPKGSKGEPGKGEMVDYNGNINEALQEIRTLALMGPPG 467
Query: 56 PPGPMGPPGE--MPCPPGNDGLPGAPGIPGECGEKGEPGERGPPG 98
PG +GPPG +P G GLPG PG GE G +G+PG+ GPPG
Sbjct: 468 LPGQIGPPGAPGIPGQKGEIGLPGPPGHDGEKGPRGKPGDMGPPG 512
Score = 66.6 bits (161), Expect = 2e-11
Identities = 35/71 (49%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Query: 28 GSPGIPGTPGSHGLPGRDGRDGLKGDPGPPGPMGPPGEMPCPPGNDGLPGAPGIPGECGE 87
G G G G GLPG G DG G PG PGP+G PG P G G G PG+ G G
Sbjct: 601 GFQGEKGDRGPLGLPGASGLDGRPGPPGTPGPIGVPGPAG-PKGERGSKGDPGMTGPTGA 659
Query: 88 KGEPGERGPPG 98
G PG GPPG
Sbjct: 660 AGLPGLHGPPG 670
Score = 65.1 bits (157), Expect = 5e-11
Identities = 48/140 (34%), Positives = 59/140 (42%), Gaps = 30/140 (21%)
Query: 28 GSPGIP--GTPGSHGLPGRDGRDGLKGDPGPPGPMGPPGE-------MPCPPGNDGLPGA 78
G+PGI G G G+PG G G +G PG PG +G GE + G G PG
Sbjct: 333 GAPGIAVAGMKGEPGIPGTKGEKGAEGSPGLPGLLGQKGEKGDAGNSIGGGRGEPGPPGL 392
Query: 79 PGIPGECGEKGEPGERGPPGLPAHLDEELQATLHDFRHQILQTRGALSLQGSIMTVGEKV 138
PG PG GE G G+ GPPG P E RGA QG G K
Sbjct: 393 PGPPGPKGEAGVDGQVGPPGQPGDKGE----------------RGAAGEQGPDGPKGSKG 436
Query: 139 FSSNGQSITF-----DAIQE 153
G+ + + +A+QE
Sbjct: 437 EPGKGEMVDYNGNINEALQE 456
Score = 64.3 bits (155), Expect = 9e-11
Identities = 39/89 (43%), Positives = 41/89 (46%), Gaps = 12/89 (13%)
Query: 20 CEVKDVCVGSPGIPGTPGSHGLPGRDGRDGLKGDPGPP--GPMGPPGEMPCPPGNDGLPG 77
C G G PG PG G G GR G GD G GP GPPG+ PG G PG
Sbjct: 117 CNCPPAFQGPTGRPGLPGDKGAIGMPGRVGSPGDAGLSIIGPRGPPGQ----PGTRGFPG 172
Query: 78 AP------GIPGECGEKGEPGERGPPGLP 100
P G PG G KG+ G GPPG P
Sbjct: 173 FPGPIGLDGKPGHPGPKGDMGLTGPPGQP 201
Score = 62.4 bits (150), Expect = 3e-10
Identities = 41/113 (36%), Positives = 48/113 (42%), Gaps = 40/113 (35%)
Query: 28 GSPGIPGTPGSHGLPGRDGRDGLKGDPGPPGP------------MGPPGE---------- 65
G PG G PG G PG+DG G+KG+ G PG G PGE
Sbjct: 503 GKPGDMGPPGPQGPPGKDGPPGVKGENGHPGSPGEKGEKGETGQAGSPGEKGEAGEKGNP 562
Query: 66 ------MPCPPGNDGLPGAPGIPGECGE------------KGEPGERGPPGLP 100
+P P G G PG G+PG GE +GE G+RGP GLP
Sbjct: 563 GAEVPGLPGPEGPPGPPGLQGVPGPKGEAGLDGAKGEKGFQGEKGDRGPLGLP 615
Score = 60.8 bits (146), Expect = 1e-09
Identities = 43/121 (35%), Positives = 48/121 (39%), Gaps = 45/121 (37%)
Query: 28 GSPGIPGTPGSHGLPGRDGRDGLKGDP------------GPPGPMGPPGE---------- 65
G PG+PG PG G G DG+ G G P GP GP G GE
Sbjct: 388 GPPGLPGPPGPKGEAGVDGQVGPPGQPGDKGERGAAGEQGPDGPKGSKGEPGKGEMVDYN 447
Query: 66 -----------------MPCPPGNDGLPGAPGIPGECGEKGEP------GERGPPGLPAH 102
P PG G PGAPGIPG+ GE G P GE+GP G P
Sbjct: 448 GNINEALQEIRTLALMGPPGLPGQIGPPGAPGIPGQKGEIGLPGPPGHDGEKGPRGKPGD 507
Query: 103 L 103
+
Sbjct: 508 M 508
Score = 60.5 bits (145), Expect = 1e-09
Identities = 30/61 (49%), Positives = 34/61 (55%), Gaps = 1/61 (1%)
Query: 27 VGSPGIPGTPGSHGLPGRDGRDGLKGDPGPPGPMGPPGEMPCPPGNDGLPGAPGIPGECG 86
+G G PG PG+ G PG G GL G PG PGP G G + PPG G G G G+CG
Sbjct: 156 IGPRGPPGQPGTRGFPGFPGPIGLDGKPGHPGPKGDMG-LTGPPGQPGPQGQKGEKGQCG 214
Query: 87 E 87
E
Sbjct: 215 E 215
Score = 59.7 bits (143), Expect = 2e-09
Identities = 32/70 (45%), Positives = 39/70 (55%), Gaps = 16/70 (22%)
Query: 43 GRDGRDGLKGDPGPPGPMGPPGEMPCPPGNDGLP---GAPGIPGECGEKGEP-------- 91
G + ++G PGPPGP GP G P G+ GLP G PG+PG G KG+P
Sbjct: 261 GEQSQASIQGPPGPPGPPGPSG----PLGHPGLPGPMGPPGLPGPPGPKGDPGIQGYHGR 316
Query: 92 -GERGPPGLP 100
GERG PG+P
Sbjct: 317 KGERGMPGMP 326
Score = 58.5 bits (140), Expect = 5e-09
Identities = 33/77 (42%), Positives = 36/77 (46%), Gaps = 7/77 (9%)
Query: 29 SPGIPGTPGSHGLPGRDGRDGLKGDPGPPGPMGPPGEMPC-------PPGNDGLPGAPGI 81
SPG P G GR G G KG G PG +G PG+ PPG G G PG
Sbjct: 114 SPGCNCPPAFQGPTGRPGLPGDKGAIGMPGRVGSPGDAGLSIIGPRGPPGQPGTRGFPGF 173
Query: 82 PGECGEKGEPGERGPPG 98
PG G G+PG GP G
Sbjct: 174 PGPIGLDGKPGHPGPKG 190
Score = 58.2 bits (139), Expect = 7e-09
Identities = 40/107 (37%), Positives = 45/107 (42%), Gaps = 34/107 (31%)
Query: 28 GSPGIPGTPGSHGLPGRDGRDGLKGD--------------PGPPGPMGPPG--EMPCPPG 71
G PG PG G G G+ G G KG+ PGP GP GPPG +P P G
Sbjct: 530 GHPGSPGEKGEKGETGQAGSPGEKGEAGEKGNPGAEVPGLPGPEGPPGPPGLQGVPGPKG 589
Query: 72 NDGLPGAPGIPGECGEKGE------------------PGERGPPGLP 100
GL GA G G GEKG+ PG GP G+P
Sbjct: 590 EAGLDGAKGEKGFQGEKGDRGPLGLPGASGLDGRPGPPGTPGPIGVP 636
Score = 49.3 bits (116), Expect = 3e-06
Identities = 25/56 (44%), Positives = 27/56 (48%), Gaps = 7/56 (12%)
Query: 28 GSPGIPGTPGSHGLPGRDGRDGLKGDPGPPGPMGPPGEM-------PCPPGNDGLP 76
G G G PG HG PG G G +G G GP G G+ PCP G DGLP
Sbjct: 655 GPTGAAGLPGLHGPPGDKGNRGERGKKGSRGPKGDKGDQGAPGLDAPCPLGEDGLP 710
Score = 48.9 bits (115), Expect = 4e-06
Identities = 41/134 (30%), Positives = 44/134 (32%), Gaps = 61/134 (45%)
Query: 28 GSPGIPGTPGSHGLPGRDGRDGLKGD---------PGPPGPMGPPGE------------M 66
G+ G PG PG GL G+ G G KGD PGP G G G+ M
Sbjct: 166 GTRGFPGFPGPIGLDGKPGHPGPKGDMGLTGPPGQPGPQGQKGEKGQCGEYPHRECLSSM 225
Query: 67 P----------------------CPP------------------GNDGLPGAPGIPGECG 86
P PP G G PG PG G G
Sbjct: 226 PAALRSSQIIALKLLPLLNSVRLAPPPVIKRRTFQGEQSQASIQGPPGPPGPPGPSGPLG 285
Query: 87 EKGEPGERGPPGLP 100
G PG GPPGLP
Sbjct: 286 HPGLPGPMGPPGLP 299
Score = 38.9 bits (89), Expect = 0.004
Identities = 19/40 (47%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Query: 59 PMGPPGEMPCPPGNDGLPGAPGIPGECGEKGEPGERGPPG 98
P PG CPP G G PG+PG+ G G PG G PG
Sbjct: 111 PKTSPG-CNCPPAFQGPTGRPGLPGDKGAIGMPGRVGSPG 149
>gi|22027587 alpha 1 type XIII collagen isoform 8 [Homo sapiens]
Length = 705
Score = 87.8 bits (216), Expect = 8e-18
Identities = 45/77 (58%), Positives = 47/77 (61%), Gaps = 7/77 (9%)
Query: 28 GSPGIPGTPGSHGLPGRDGRDGLKGDPGPPGPMGPPGEMPCPPGNDGLPGA------PGI 81
G+PGIPG G GLPG G DG KG G PG MGPPG PPG DG PG PG
Sbjct: 476 GAPGIPGQKGEIGLPGPPGHDGEKGPRGKPGDMGPPGPQG-PPGKDGPPGVKGENGHPGS 534
Query: 82 PGECGEKGEPGERGPPG 98
PGE GEKGE G+ G PG
Sbjct: 535 PGEKGEKGETGQAGSPG 551
Score = 71.6 bits (174), Expect = 6e-13
Identities = 44/98 (44%), Positives = 46/98 (46%), Gaps = 19/98 (19%)
Query: 28 GSPGIPGTPGSHGLPGRDGRDGLKGDPGPPGPMGPPG-----------EMPCPPGNDGLP 76
G PG PG G G PG G G G PGPPGP G PG MP PG G
Sbjct: 273 GPPGPPGPSGPLGHPGLPGPMGPPGLPGPPGPKGDPGIQGYHGRKGERGMPGMPGKHGAK 332
Query: 77 GAPGI--------PGECGEKGEPGERGPPGLPAHLDEE 106
GAPGI PG G KGE G G PGLP L ++
Sbjct: 333 GAPGIAVAGMKGEPGIPGTKGEKGAEGSPGLPGLLGQK 370
Score = 68.2 bits (165), Expect = 6e-12
Identities = 37/79 (46%), Positives = 43/79 (54%), Gaps = 9/79 (11%)
Query: 28 GSPGIPGTPGSHGLPGRDGRDG--------LKGDPGPPGPMGPPGEMPCPPGNDGLPGAP 79
G PG+PG G+ G+PGR G G +G PG PG G PG P P G DG PG P
Sbjct: 128 GRPGLPGDKGAIGMPGRVGSPGDAGLSIIGPRGPPGQPGTRGFPG-FPGPIGLDGKPGHP 186
Query: 80 GIPGECGEKGEPGERGPPG 98
G G+ G G PG+ GP G
Sbjct: 187 GPKGDMGLTGPPGQPGPQG 205
Score = 67.0 bits (162), Expect = 1e-11
Identities = 36/74 (48%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Query: 27 VGSPGIPGTPGSHGLPGRDGRDGLKGDPGPPGPMGPPGEMPCPP-GNDGLPGAPGIPGEC 85
+G PG+PG PG G PG G G KG+ G PG G G P G+ G PGIPG
Sbjct: 293 MGPPGLPGPPGPKGDPGIQGYHGRKGERGMPGMPGKHGAKGAPGIAVAGMKGEPGIPGTK 352
Query: 86 GEKGEPGERGPPGL 99
GEKG G G PGL
Sbjct: 353 GEKGAEGSPGLPGL 366
Score = 67.0 bits (162), Expect = 1e-11
Identities = 40/105 (38%), Positives = 45/105 (42%), Gaps = 33/105 (31%)
Query: 27 VGSPGIPGTPGSHGLPGRDGRDGLKGD-------------------------------PG 55
VG PG PG G G G G DG KG PG
Sbjct: 408 VGPPGQPGDKGERGAAGEQGPDGPKGSKGEPGKGEMVDYNGNINEALQEIRTLALMGPPG 467
Query: 56 PPGPMGPPGE--MPCPPGNDGLPGAPGIPGECGEKGEPGERGPPG 98
PG +GPPG +P G GLPG PG GE G +G+PG+ GPPG
Sbjct: 468 LPGQIGPPGAPGIPGQKGEIGLPGPPGHDGEKGPRGKPGDMGPPG 512
Score = 66.2 bits (160), Expect = 2e-11
Identities = 33/71 (46%), Positives = 39/71 (54%), Gaps = 4/71 (5%)
Query: 28 GSPGIPGTPGSHGLPGRDGRDGLKGDPGPPGPMGPPGEMPCPPGNDGLPGAPGIPGECGE 87
G G+PG G GL G G G +G+ G GP+G PG PG G+PG G GE G
Sbjct: 580 GLQGVPGPKGEAGLDGAKGEKGFQGEKGDRGPLGLPG----TPGPIGVPGPAGPKGERGS 635
Query: 88 KGEPGERGPPG 98
KG+PG GP G
Sbjct: 636 KGDPGMTGPTG 646
Score = 65.9 bits (159), Expect = 3e-11
Identities = 37/79 (46%), Positives = 44/79 (55%), Gaps = 5/79 (6%)
Query: 28 GSPGIPGTPGSHGLPGR---DGRDGLKGDPGPPGPMGPPG--EMPCPPGNDGLPGAPGIP 82
G G+PGTPG G+PG G G KGDPG GP G G + PPG+ G G G
Sbjct: 610 GPLGLPGTPGPIGVPGPAGPKGERGSKGDPGMTGPTGAAGLPGLHGPPGDKGNRGERGKK 669
Query: 83 GECGEKGEPGERGPPGLPA 101
G G KG+ G++G PGL A
Sbjct: 670 GSRGPKGDKGDQGAPGLDA 688
Score = 65.1 bits (157), Expect = 5e-11
Identities = 48/140 (34%), Positives = 59/140 (42%), Gaps = 30/140 (21%)
Query: 28 GSPGIP--GTPGSHGLPGRDGRDGLKGDPGPPGPMGPPGE-------MPCPPGNDGLPGA 78
G+PGI G G G+PG G G +G PG PG +G GE + G G PG
Sbjct: 333 GAPGIAVAGMKGEPGIPGTKGEKGAEGSPGLPGLLGQKGEKGDAGNSIGGGRGEPGPPGL 392
Query: 79 PGIPGECGEKGEPGERGPPGLPAHLDEELQATLHDFRHQILQTRGALSLQGSIMTVGEKV 138
PG PG GE G G+ GPPG P E RGA QG G K
Sbjct: 393 PGPPGPKGEAGVDGQVGPPGQPGDKGE----------------RGAAGEQGPDGPKGSKG 436
Query: 139 FSSNGQSITF-----DAIQE 153
G+ + + +A+QE
Sbjct: 437 EPGKGEMVDYNGNINEALQE 456
Score = 65.1 bits (157), Expect = 5e-11
Identities = 39/89 (43%), Positives = 43/89 (48%), Gaps = 16/89 (17%)
Query: 28 GSPGIPGTPGSHGLPGRDGRDGLKGD--------------PGPPGPMGPPG--EMPCPPG 71
G PG PG G G G+ G G KG+ PGP GP GPPG +P P G
Sbjct: 530 GHPGSPGEKGEKGETGQAGSPGEKGEAGEKGNPGAEVPGLPGPEGPPGPPGLQGVPGPKG 589
Query: 72 NDGLPGAPGIPGECGEKGEPGERGPPGLP 100
GL GA G G GEKG+ G G PG P
Sbjct: 590 EAGLDGAKGEKGFQGEKGDRGPLGLPGTP 618
Score = 64.3 bits (155), Expect = 9e-11
Identities = 39/89 (43%), Positives = 41/89 (46%), Gaps = 12/89 (13%)
Query: 20 CEVKDVCVGSPGIPGTPGSHGLPGRDGRDGLKGDPGPP--GPMGPPGEMPCPPGNDGLPG 77
C G G PG PG G G GR G GD G GP GPPG+ PG G PG
Sbjct: 117 CNCPPAFQGPTGRPGLPGDKGAIGMPGRVGSPGDAGLSIIGPRGPPGQ----PGTRGFPG 172
Query: 78 AP------GIPGECGEKGEPGERGPPGLP 100
P G PG G KG+ G GPPG P
Sbjct: 173 FPGPIGLDGKPGHPGPKGDMGLTGPPGQP 201
Score = 62.4 bits (150), Expect = 3e-10
Identities = 37/95 (38%), Positives = 42/95 (44%), Gaps = 22/95 (23%)
Query: 28 GSPGIPGTPGSHGLPGRDGRDGLKGDPGPPGPMGPPGE----------MPCPPGNDGLPG 77
G PG+ G G G PG G G G G PG G GE +P P G G PG
Sbjct: 521 GPPGVKGENGHPGSPGEKGEKGETGQAGSPGEKGEAGEKGNPGAEVPGLPGPEGPPGPPG 580
Query: 78 APGIPGECGE------------KGEPGERGPPGLP 100
G+PG GE +GE G+RGP GLP
Sbjct: 581 LQGVPGPKGEAGLDGAKGEKGFQGEKGDRGPLGLP 615
Score = 60.8 bits (146), Expect = 1e-09
Identities = 43/121 (35%), Positives = 48/121 (39%), Gaps = 45/121 (37%)
Query: 28 GSPGIPGTPGSHGLPGRDGRDGLKGDP------------GPPGPMGPPGE---------- 65
G PG+PG PG G G DG+ G G P GP GP G GE
Sbjct: 388 GPPGLPGPPGPKGEAGVDGQVGPPGQPGDKGERGAAGEQGPDGPKGSKGEPGKGEMVDYN 447
Query: 66 -----------------MPCPPGNDGLPGAPGIPGECGEKGEP------GERGPPGLPAH 102
P PG G PGAPGIPG+ GE G P GE+GP G P
Sbjct: 448 GNINEALQEIRTLALMGPPGLPGQIGPPGAPGIPGQKGEIGLPGPPGHDGEKGPRGKPGD 507
Query: 103 L 103
+
Sbjct: 508 M 508
Score = 60.5 bits (145), Expect = 1e-09
Identities = 30/61 (49%), Positives = 34/61 (55%), Gaps = 1/61 (1%)
Query: 27 VGSPGIPGTPGSHGLPGRDGRDGLKGDPGPPGPMGPPGEMPCPPGNDGLPGAPGIPGECG 86
+G G PG PG+ G PG G GL G PG PGP G G + PPG G G G G+CG
Sbjct: 156 IGPRGPPGQPGTRGFPGFPGPIGLDGKPGHPGPKGDMG-LTGPPGQPGPQGQKGEKGQCG 214
Query: 87 E 87
E
Sbjct: 215 E 215
Score = 59.7 bits (143), Expect = 2e-09
Identities = 32/70 (45%), Positives = 39/70 (55%), Gaps = 16/70 (22%)
Query: 43 GRDGRDGLKGDPGPPGPMGPPGEMPCPPGNDGLP---GAPGIPGECGEKGEP-------- 91
G + ++G PGPPGP GP G P G+ GLP G PG+PG G KG+P
Sbjct: 261 GEQSQASIQGPPGPPGPPGPSG----PLGHPGLPGPMGPPGLPGPPGPKGDPGIQGYHGR 316
Query: 92 -GERGPPGLP 100
GERG PG+P
Sbjct: 317 KGERGMPGMP 326
Score = 58.5 bits (140), Expect = 5e-09
Identities = 33/77 (42%), Positives = 36/77 (46%), Gaps = 7/77 (9%)
Query: 29 SPGIPGTPGSHGLPGRDGRDGLKGDPGPPGPMGPPGEMPC-------PPGNDGLPGAPGI 81
SPG P G GR G G KG G PG +G PG+ PPG G G PG
Sbjct: 114 SPGCNCPPAFQGPTGRPGLPGDKGAIGMPGRVGSPGDAGLSIIGPRGPPGQPGTRGFPGF 173
Query: 82 PGECGEKGEPGERGPPG 98
PG G G+PG GP G
Sbjct: 174 PGPIGLDGKPGHPGPKG 190
Score = 48.9 bits (115), Expect = 4e-06
Identities = 41/134 (30%), Positives = 44/134 (32%), Gaps = 61/134 (45%)
Query: 28 GSPGIPGTPGSHGLPGRDGRDGLKGD---------PGPPGPMGPPGE------------M 66
G+ G PG PG GL G+ G G KGD PGP G G G+ M
Sbjct: 166 GTRGFPGFPGPIGLDGKPGHPGPKGDMGLTGPPGQPGPQGQKGEKGQCGEYPHRECLSSM 225
Query: 67 P----------------------CPP------------------GNDGLPGAPGIPGECG 86
P PP G G PG PG G G
Sbjct: 226 PAALRSSQIIALKLLPLLNSVRLAPPPVIKRRTFQGEQSQASIQGPPGPPGPPGPSGPLG 285
Query: 87 EKGEPGERGPPGLP 100
G PG GPPGLP
Sbjct: 286 HPGLPGPMGPPGLP 299
Score = 43.5 bits (101), Expect = 2e-04
Identities = 23/49 (46%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
Query: 28 GSPGIPGTPGSHGLPGRDGRDGLKGDPGPPGPMGPPGEMPCPPGNDGLP 76
G G PG G+ G G+ G G KGD G G P + PCP G DGLP
Sbjct: 652 GLHGPPGDKGNRGERGKKGSRGPKGDKGDQG--APGLDAPCPLGEDGLP 698
Score = 38.9 bits (89), Expect = 0.004
Identities = 19/40 (47%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Query: 59 PMGPPGEMPCPPGNDGLPGAPGIPGECGEKGEPGERGPPG 98
P PG CPP G G PG+PG+ G G PG G PG
Sbjct: 111 PKTSPG-CNCPPAFQGPTGRPGLPGDKGAIGMPGRVGSPG 149
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.315 0.140 0.450
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,495,227
Number of Sequences: 37866
Number of extensions: 1057203
Number of successful extensions: 44785
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 336
Number of HSP's successfully gapped in prelim test: 487
Number of HSP's that attempted gapping in prelim test: 4730
Number of HSP's gapped (non-prelim): 7293
length of query: 245
length of database: 18,247,518
effective HSP length: 100
effective length of query: 145
effective length of database: 14,460,918
effective search space: 2096833110
effective search space used: 2096833110
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.