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Search of human proteins with 146231966
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|146231966 inactive Ufm1-specific protease 1 [Homo sapiens]
(142 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|146231966 inactive Ufm1-specific protease 1 [Homo sapiens] 305 8e-84
gi|227498137 UFM1-specific peptidase 2 [Homo sapiens] 78 3e-15
gi|239756845 PREDICTED: hypothetical protein [Homo sapiens] 29 1.1
gi|169211844 PREDICTED: hypothetical protein [Homo sapiens] 29 1.1
gi|169211031 PREDICTED: hypothetical protein [Homo sapiens] 29 1.1
gi|55770876 notch4 preproprotein [Homo sapiens] 28 3.3
gi|239748034 PREDICTED: hypothetical protein [Homo sapiens] 27 5.7
gi|239741926 PREDICTED: hypothetical protein XP_002342353 [Homo ... 27 5.7
gi|145701025 multiple EGF-like-domains 8 [Homo sapiens] 27 7.4
gi|229577180 MPN domain containing isoform 2 [Homo sapiens] 26 9.7
gi|31542699 MPN domain containing isoform 1 [Homo sapiens] 26 9.7
gi|239753110 PREDICTED: doublecortin domain-containing protein E... 26 9.7
gi|51479192 ring finger protein 1 [Homo sapiens] 26 9.7
gi|22095335 NFAT activation molecule 1 precursor [Homo sapiens] 26 9.7
>gi|146231966 inactive Ufm1-specific protease 1 [Homo sapiens]
Length = 142
Score = 305 bits (781), Expect = 8e-84
Identities = 142/142 (100%), Positives = 142/142 (100%)
Query: 1 MGDKPPGFRGSRDWIGCVEASLCLAHFGGPQGRLCHVPRGVGLHGELERLYSHFAGGGGP 60
MGDKPPGFRGSRDWIGCVEASLCLAHFGGPQGRLCHVPRGVGLHGELERLYSHFAGGGGP
Sbjct: 1 MGDKPPGFRGSRDWIGCVEASLCLAHFGGPQGRLCHVPRGVGLHGELERLYSHFAGGGGP 60
Query: 61 VMVGGDADARSKALLGVCVGSGTEAYVLVLDPHYWGTPKSPSELQAAGWVGWQEVSAAFD 120
VMVGGDADARSKALLGVCVGSGTEAYVLVLDPHYWGTPKSPSELQAAGWVGWQEVSAAFD
Sbjct: 61 VMVGGDADARSKALLGVCVGSGTEAYVLVLDPHYWGTPKSPSELQAAGWVGWQEVSAAFD 120
Query: 121 PNSFYNLCLTSLSSQQQQRTLD 142
PNSFYNLCLTSLSSQQQQRTLD
Sbjct: 121 PNSFYNLCLTSLSSQQQQRTLD 142
>gi|227498137 UFM1-specific peptidase 2 [Homo sapiens]
Length = 469
Score = 77.8 bits (190), Expect = 3e-15
Identities = 48/129 (37%), Positives = 67/129 (51%), Gaps = 5/129 (3%)
Query: 2 GDKPPGFRGSRDWIGCVEASLCLAHFGGPQGRLCHVPRGVGLHGELERLYSHFAGGGGPV 61
GDKP F GSR WIG +E L L G ++ V +G + + L +HF G PV
Sbjct: 338 GDKPATFVGSRQWIGSIEVQLVLNQLIGITSKILFVSQGSEIASQGRELANHFQSEGTPV 397
Query: 62 MVGGDADARSKALLGVCVGSGT-EAYVLVLDPHYWGTPKSPSELQAAGWVGWQEVSAAFD 120
M+GG A + +LGV T + L+LDPHY G L+ GW GW+ ++
Sbjct: 398 MIGGGVLAHT--ILGVAWNEITGQIKFLILDPHYTGAEDLQVILE-KGWCGWKGPD-FWN 453
Query: 121 PNSFYNLCL 129
+++YNLCL
Sbjct: 454 KDAYYNLCL 462
>gi|239756845 PREDICTED: hypothetical protein [Homo sapiens]
Length = 257
Score = 29.3 bits (64), Expect = 1.1
Identities = 25/93 (26%), Positives = 32/93 (34%), Gaps = 15/93 (16%)
Query: 55 AGGGGPVMVGGDADARSKALLGV--------CVGSGTEAYVLVLDPHYWGTPKSPSELQA 106
AGGGG + G A+ +A G VG G E WG
Sbjct: 36 AGGGGGGLGSGGRSAQRRAGAGARRPIGAAPSVGPGGEL-------QGWGRKSGCRPPGP 88
Query: 107 AGWVGWQEVSAAFDPNSFYNLCLTSLSSQQQQR 139
GW G +++ P F N C S +Q R
Sbjct: 89 EGWAGGRKLRRWLPPRRFSNFCCRSPCAQTAVR 121
>gi|169211844 PREDICTED: hypothetical protein [Homo sapiens]
Length = 193
Score = 29.3 bits (64), Expect = 1.1
Identities = 25/93 (26%), Positives = 32/93 (34%), Gaps = 15/93 (16%)
Query: 55 AGGGGPVMVGGDADARSKALLGV--------CVGSGTEAYVLVLDPHYWGTPKSPSELQA 106
AGGGG + G A+ +A G VG G E WG
Sbjct: 36 AGGGGGGLGSGGRSAQRRAGAGARRPIGAAPSVGPGGEL-------QGWGRKSGCRPPGP 88
Query: 107 AGWVGWQEVSAAFDPNSFYNLCLTSLSSQQQQR 139
GW G +++ P F N C S +Q R
Sbjct: 89 EGWAGGRKLRRWLPPRRFSNFCCRSPCAQTAVR 121
>gi|169211031 PREDICTED: hypothetical protein [Homo sapiens]
Length = 257
Score = 29.3 bits (64), Expect = 1.1
Identities = 25/93 (26%), Positives = 32/93 (34%), Gaps = 15/93 (16%)
Query: 55 AGGGGPVMVGGDADARSKALLGV--------CVGSGTEAYVLVLDPHYWGTPKSPSELQA 106
AGGGG + G A+ +A G VG G E WG
Sbjct: 36 AGGGGGGLGSGGRSAQRRAGAGARRPIGAAPSVGPGGEL-------QGWGRKSGCRPPGP 88
Query: 107 AGWVGWQEVSAAFDPNSFYNLCLTSLSSQQQQR 139
GW G +++ P F N C S +Q R
Sbjct: 89 EGWAGGRKLRRWLPPRRFSNFCCRSPCAQTAVR 121
>gi|55770876 notch4 preproprotein [Homo sapiens]
Length = 2003
Score = 27.7 bits (60), Expect = 3.3
Identities = 10/24 (41%), Positives = 12/24 (50%)
Query: 17 CVEASLCLAHFGGPQGRLCHVPRG 40
C C A G P G +CH P+G
Sbjct: 1055 CFHGGTCEATAGSPLGFICHCPKG 1078
>gi|239748034 PREDICTED: hypothetical protein [Homo sapiens]
Length = 206
Score = 26.9 bits (58), Expect = 5.7
Identities = 23/62 (37%), Positives = 25/62 (40%), Gaps = 6/62 (9%)
Query: 29 GPQGRLCHVPRGVGLHGELERLYSHFAGG------GGPVMVGGDADARSKALLGVCVGSG 82
G GR G H +RL GG G + GG A A ALLGV VG G
Sbjct: 104 GRWGRALQPALRGGHHASSQRLCQTLDGGHPDSPCGASLEAGGWARAGWWALLGVPVGGG 163
Query: 83 TE 84
E
Sbjct: 164 GE 165
>gi|239741926 PREDICTED: hypothetical protein XP_002342353 [Homo
sapiens]
Length = 206
Score = 26.9 bits (58), Expect = 5.7
Identities = 23/62 (37%), Positives = 25/62 (40%), Gaps = 6/62 (9%)
Query: 29 GPQGRLCHVPRGVGLHGELERLYSHFAGG------GGPVMVGGDADARSKALLGVCVGSG 82
G GR G H +RL GG G + GG A A ALLGV VG G
Sbjct: 104 GRWGRALQPALRGGHHASSQRLCQTLDGGHPDSPCGASLEAGGWARAGWWALLGVPVGGG 163
Query: 83 TE 84
E
Sbjct: 164 GE 165
>gi|145701025 multiple EGF-like-domains 8 [Homo sapiens]
Length = 2778
Score = 26.6 bits (57), Expect = 7.4
Identities = 22/60 (36%), Positives = 25/60 (41%), Gaps = 9/60 (15%)
Query: 20 ASLCLAHFGGPQGRLCHVPRGVGLHGEL----ERLYSHFAGGGGPVMVGGDADARSKALL 75
A+L L GGP H P G L L RL+ + GGGG G A K LL
Sbjct: 2714 ATLLLQLPGGP-----HAPNGACLGSALVTLRHRLHEYCGGGGGAGGSGHGTGAGRKGLL 2768
>gi|229577180 MPN domain containing isoform 2 [Homo sapiens]
Length = 451
Score = 26.2 bits (56), Expect = 9.7
Identities = 23/75 (30%), Positives = 33/75 (44%), Gaps = 2/75 (2%)
Query: 55 AGGGGPVMVGGDADARSKALLGVCVGSGTEAYVLVLDPHYWGTPKSPSELQAAGWVGWQE 114
AG GG GG R+ L + + E VL +Y G K +LQ G + WQE
Sbjct: 58 AGAGGCGGPGGALTRRAVTLRVLLKDALLEPGAGVLSIYYLGK-KFLGDLQPDGRIMWQE 116
Query: 115 VSAAFD-PNSFYNLC 128
F+ P+++ C
Sbjct: 117 TGQTFNSPSAWATHC 131
>gi|31542699 MPN domain containing isoform 1 [Homo sapiens]
Length = 471
Score = 26.2 bits (56), Expect = 9.7
Identities = 23/75 (30%), Positives = 33/75 (44%), Gaps = 2/75 (2%)
Query: 55 AGGGGPVMVGGDADARSKALLGVCVGSGTEAYVLVLDPHYWGTPKSPSELQAAGWVGWQE 114
AG GG GG R+ L + + E VL +Y G K +LQ G + WQE
Sbjct: 58 AGAGGCGGPGGALTRRAVTLRVLLKDALLEPGAGVLSIYYLGK-KFLGDLQPDGRIMWQE 116
Query: 115 VSAAFD-PNSFYNLC 128
F+ P+++ C
Sbjct: 117 TGQTFNSPSAWATHC 131
>gi|239753110 PREDICTED: doublecortin domain-containing protein
ENSP00000382097-like [Homo sapiens]
Length = 530
Score = 26.2 bits (56), Expect = 9.7
Identities = 10/20 (50%), Positives = 12/20 (60%)
Query: 92 PHYWGTPKSPSELQAAGWVG 111
PH G P +PS + A GW G
Sbjct: 17 PHLPGLPVAPSPVSALGWSG 36
>gi|51479192 ring finger protein 1 [Homo sapiens]
Length = 406
Score = 26.2 bits (56), Expect = 9.7
Identities = 18/46 (39%), Positives = 20/46 (43%), Gaps = 5/46 (10%)
Query: 38 PRGVGLHGELERLYSHFAGGGGPVMVGGDADARSKALLGVCVGSGT 83
PRG G G S GGGG VGG A + G +G GT
Sbjct: 203 PRGGGAGGS-----SVGTGGGGTGGVGGGAGSEDSGDRGGTLGGGT 243
>gi|22095335 NFAT activation molecule 1 precursor [Homo sapiens]
Length = 270
Score = 26.2 bits (56), Expect = 9.7
Identities = 14/32 (43%), Positives = 19/32 (59%), Gaps = 2/32 (6%)
Query: 80 GSGTEAYVLVLDPHYWGTPKSPSELQAAGWVG 111
GSGT ++LV D Y P+SP +L G+ G
Sbjct: 142 GSGT--FILVRDAGYREPPQSPQKLLLFGFTG 171
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.319 0.139 0.461
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,951,828
Number of Sequences: 37866
Number of extensions: 357748
Number of successful extensions: 652
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 644
Number of HSP's gapped (non-prelim): 17
length of query: 142
length of database: 18,247,518
effective HSP length: 92
effective length of query: 50
effective length of database: 14,763,846
effective search space: 738192300
effective search space used: 738192300
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 56 (26.2 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.