Guide to the Human Genome
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Name: UFSP1 Sequence: fasta or formatted (142aa) NCBI GI: 146231966
Description:

inactive Ufm1-specific protease 1

Referenced in:

Ubiquitin and Related Protein Modifications

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.7         11           2
 C cysteine            3.5          5           1
 D aspartate           4.9          7           1
 E glutamate           4.2          6           1
 F phenylalanine       3.5          5           1
 G glycine            15.5         22           4
 H histidine           3.5          5           1
 I isoleucine          0.7          1           1
 K lysine              2.1          3           1
 L leucine            10.6         15           2
 M methionine          1.4          2           1
 N asparagine          1.4          2           1
 P proline             6.3          9           2
 Q glutamine           4.9          7           4
 R arginine            4.9          7           1
 S serine              8.5         12           2
 T threonine           2.8          4           1
 V valine              7.7         11           1
 W tryptophan          2.8          4           1
 Y tyrosine            2.8          4           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   inactive Ufm1-specific protease 1 
UFSP2                 0.189   UFM1-specific peptidase 2 
LOC339192             0.014   PREDICTED: hypothetical protein 
LOC339192             0.014   PREDICTED: hypothetical protein 
LOC339192             0.014   PREDICTED: hypothetical protein 
NOTCH4                0.011   notch4 preproprotein 
LOC100288928          0.007   PREDICTED: hypothetical protein 
LOC100288928          0.007   PREDICTED: hypothetical protein XP_002342353 
MEGF8                 0.007   multiple EGF-like-domains 8 
MPND                  0.004   MPN domain containing isoform 2 
MPND                  0.004   MPN domain containing isoform 1 
LOC728597             0.004   PREDICTED: doublecortin domain-containing protein E...
RING1                 0.004   ring finger protein 1 
NFAM1                 0.004   NFAT activation molecule 1 precursor 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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