Guide to the Human Genome
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Name: UFSP2 Sequence: fasta or formatted (469aa) NCBI GI: 227498137
Description:

UFM1-specific peptidase 2

Referenced in:

Ubiquitin and Related Protein Modifications

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.9         23           2
 C cysteine            1.5          7           1
 D aspartate           5.5         26           2
 E glutamate           5.3         25           2
 F phenylalanine       3.6         17           1
 G glycine             7.0         33           3
 H histidine           3.8         18           2
 I isoleucine          8.7         41           2
 K lysine              6.0         28           2
 L leucine             9.6         45           2
 M methionine          3.0         14           1
 N asparagine          4.3         20           1
 P proline             5.5         26           2
 Q glutamine           4.5         21           2
 R arginine            4.1         19           1
 S serine              6.4         30           2
 T threonine           4.7         22           1
 V valine              5.5         26           2
 W tryptophan          1.9          9           1
 Y tyrosine            4.1         19           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   UFM1-specific peptidase 2 
UFSP1                 0.056   inactive Ufm1-specific protease 1 
ZUFSP                 0.016   zinc finger with UFM1-specific peptidase domain [Hom...
MTMR7                 0.006   myotubularin related protein 7 
PHLDB2                0.006   pleckstrin homology-like domain, family B, member 2...
PHLDB2                0.006   pleckstrin homology-like domain, family B, member 2...
PHLDB2                0.006   pleckstrin homology-like domain, family B, member 2...
PHLDB2                0.006   pleckstrin homology-like domain, family B, member 2 ...
MGAT5                 0.005   N-acetylglucosaminyltransferase V 
LOC652460             0.005   PREDICTED: similar to plectin 1, partial 
PLEC1                 0.005   plectin 1 isoform 11 
PLEC1                 0.005   plectin 1 isoform 10 
PLEC1                 0.005   plectin 1 isoform 8 
PLEC1                 0.005   plectin 1 isoform 7 
PLEC1                 0.005   plectin 1 isoform 6 
PLEC1                 0.005   plectin 1 isoform 3 
PLEC1                 0.005   plectin 1 isoform 2 
PLEC1                 0.005   plectin 1 isoform 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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