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Search of human proteins with 146229333
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|146229333 hypothetical protein LOC284021 [Homo sapiens]
(343 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|146229333 hypothetical protein LOC284021 [Homo sapiens] 703 0.0
gi|21314764 Fc receptor-like 3 precursor [Homo sapiens] 68 1e-11
gi|157694526 Fc receptor-like 5 [Homo sapiens] 65 1e-10
gi|19923629 Fc receptor-like 2 precursor [Homo sapiens] 59 6e-09
gi|110347451 platelet/endothelial cell adhesion molecule [Homo s... 56 5e-08
gi|226958547 Fc receptor-like 1 isoform 2 precursor [Homo sapiens] 50 3e-06
gi|226958551 Fc receptor-like 1 isoform 3 precursor [Homo sapiens] 48 1e-05
gi|16418419 Fc receptor-like 1 isoform 1 precursor [Homo sapiens] 48 1e-05
gi|8393638 F11 receptor precursor [Homo sapiens] 40 0.003
gi|157168355 CD22 molecule [Homo sapiens] 37 0.026
gi|13489095 sialoadhesin precursor [Homo sapiens] 37 0.026
gi|226342990 SLAM family member 9 isoform 1 [Homo sapiens] 36 0.044
gi|118572606 hemicentin 1 [Homo sapiens] 36 0.044
gi|59939900 opioid binding protein/cell adhesion molecule-like i... 35 0.13
gi|11225258 myelin associated glycoprotein isoform a precursor [... 34 0.17
gi|18104957 myelin associated glycoprotein isoform b precursor [... 34 0.17
gi|192449445 cartilage intermediate layer protein [Homo sapiens] 34 0.22
gi|121674801 hepatocyte cell adhesion molecule [Homo sapiens] 34 0.22
gi|110349719 titin isoform N2-A [Homo sapiens] 33 0.28
gi|226342992 SLAM family member 9 isoform 2 [Homo sapiens] 32 0.63
gi|45594240 limbic system-associated membrane protein [Homo sapi... 32 0.83
gi|50878302 Fc receptor-like B [Homo sapiens] 32 1.1
gi|194328712 pregnancy specific beta-1-glycoprotein 8 isoform c ... 32 1.1
gi|115298665 neurotrimin isoform 2 [Homo sapiens] 31 1.4
gi|194328710 pregnancy specific beta-1-glycoprotein 8 isoform b ... 31 1.4
gi|51510887 pregnancy specific beta-1-glycoprotein 8 isoform a [... 31 1.4
gi|221316762 neurotrimin isoform 4 [Homo sapiens] 31 1.8
gi|221316757 neurotrimin isoform 3 [Homo sapiens] 31 1.8
gi|4505505 opioid binding protein/cell adhesion molecule-like is... 31 1.8
gi|21314600 carcinoembryonic antigen-related cell adhesion molec... 31 1.8
>gi|146229333 hypothetical protein LOC284021 [Homo sapiens]
Length = 343
Score = 703 bits (1815), Expect = 0.0
Identities = 343/343 (100%), Positives = 343/343 (100%)
Query: 1 MWSHLNRLLFWSIFSSVTCRKAVLDCEAMKTNEFPSPCLDSKTKVVMKGQNVSMFCSHKN 60
MWSHLNRLLFWSIFSSVTCRKAVLDCEAMKTNEFPSPCLDSKTKVVMKGQNVSMFCSHKN
Sbjct: 1 MWSHLNRLLFWSIFSSVTCRKAVLDCEAMKTNEFPSPCLDSKTKVVMKGQNVSMFCSHKN 60
Query: 61 KSLQITYSLFRRKTHLGTQDGKGEPAIFNLSITEAHESGPYKCKAQVTSCSKYSRDFSFT 120
KSLQITYSLFRRKTHLGTQDGKGEPAIFNLSITEAHESGPYKCKAQVTSCSKYSRDFSFT
Sbjct: 61 KSLQITYSLFRRKTHLGTQDGKGEPAIFNLSITEAHESGPYKCKAQVTSCSKYSRDFSFT 120
Query: 121 IVDPVTSPVLNIMVIQTETDRHITLHCLSVNGSLPINYTFFENHVAISPAISKYDREPAE 180
IVDPVTSPVLNIMVIQTETDRHITLHCLSVNGSLPINYTFFENHVAISPAISKYDREPAE
Sbjct: 121 IVDPVTSPVLNIMVIQTETDRHITLHCLSVNGSLPINYTFFENHVAISPAISKYDREPAE 180
Query: 181 FNLTKKNPGEEEEYRCEAKNRLPNYATYSHPVTMPSTGGDSCPFCLKLLLPGLLLLLVVI 240
FNLTKKNPGEEEEYRCEAKNRLPNYATYSHPVTMPSTGGDSCPFCLKLLLPGLLLLLVVI
Sbjct: 181 FNLTKKNPGEEEEYRCEAKNRLPNYATYSHPVTMPSTGGDSCPFCLKLLLPGLLLLLVVI 240
Query: 241 ILILAFWVLPKYKTRKAMRNNVPRDRGDTAMEVGIYANILEKQAKEESVPEVGSRPCVST 300
ILILAFWVLPKYKTRKAMRNNVPRDRGDTAMEVGIYANILEKQAKEESVPEVGSRPCVST
Sbjct: 241 ILILAFWVLPKYKTRKAMRNNVPRDRGDTAMEVGIYANILEKQAKEESVPEVGSRPCVST 300
Query: 301 AQDEAKHSQELQYATPVFQEVAPREQEACDSYKSGYVYSELNF 343
AQDEAKHSQELQYATPVFQEVAPREQEACDSYKSGYVYSELNF
Sbjct: 301 AQDEAKHSQELQYATPVFQEVAPREQEACDSYKSGYVYSELNF 343
>gi|21314764 Fc receptor-like 3 precursor [Homo sapiens]
Length = 734
Score = 67.8 bits (164), Expect = 1e-11
Identities = 58/175 (33%), Positives = 77/175 (44%), Gaps = 12/175 (6%)
Query: 49 GQNVSMFCSHKNKSLQITYSLFRRKTHLGTQDG-KGEPAIFNLSITEAHESGPYKCKAQV 107
G + + C S I Y + LG G A FNLS+T H SG Y C A
Sbjct: 397 GDLLELHCESLRGSPPILYRFYHEDVTLGNSSAPSGGGASFNLSLTAEH-SGNYSCDADN 455
Query: 108 TSCSKYSRDFSFTIVDPVTSPVLNIMV--IQTETDRHITLHCLSVNGSLPINYTFFENHV 165
+++S S + PV+ PVL + Q + LHC S+ GS PI Y F+
Sbjct: 456 GLGAQHSHGVSLRVTVPVSRPVLTLRAPGAQAVVGDLLELHCESLRGSFPILYWFYHEDD 515
Query: 166 AISPAISKYDREPAEFN--LTKKNPGEEEEYRCEAKNRLPNYATYSHPVTMPSTG 218
+ IS + A FN LT ++ G Y CEA N L A +S VT+ TG
Sbjct: 516 TLG-NISAHSGGGASFNLSLTTEHSG---NYSCEADNGLG--AQHSKVVTLNVTG 564
Score = 56.2 bits (134), Expect = 4e-08
Identities = 57/193 (29%), Positives = 87/193 (45%), Gaps = 13/193 (6%)
Query: 46 VMKGQNVSMFCSHKNKSLQITYSLFR--RKTHLGTQDGKGEPAIFNLSITEAHESGPYKC 103
+++G+N+ + CS S +T+S + R LG + + A ++ + ++G Y C
Sbjct: 299 LIEGENMVLICSVAQGSGTVTFSWHKEGRVRSLGRKTQRSLLAELHVLTVKESDAGRYYC 358
Query: 104 KAQVTSCSKYSRDFSFTIVDPVTSPVLNIMVIQTET--DRHITLHCLSVNGSLPINYTFF 161
A S T+ PV+ PVL + T + LHC S+ GS PI Y F+
Sbjct: 359 AADNVHSPILSTWIRVTVRIPVSHPVLTFRAPRAHTVVGDLLELHCESLRGSPPILYRFY 418
Query: 162 ENHVAISPAISKYDREPAEFN--LTKKNPGEEEEYRCEAKNRLPNYATYSHPVTMPSTGG 219
V + + S A FN LT ++ G Y C+A N L A +SH V++ T
Sbjct: 419 HEDVTLGNS-SAPSGGGASFNLSLTAEHSG---NYSCDADNGLG--AQHSHGVSLRVTVP 472
Query: 220 DSCPFCLKLLLPG 232
S P L L PG
Sbjct: 473 VSRP-VLTLRAPG 484
>gi|157694526 Fc receptor-like 5 [Homo sapiens]
Length = 977
Score = 64.7 bits (156), Expect = 1e-10
Identities = 61/189 (32%), Positives = 83/189 (43%), Gaps = 13/189 (6%)
Query: 49 GQNVSMFCSHKNKSLQITYSLFRRKTHLGTQDG-KGEPAIFNLSITEAHESGPYKCKAQV 107
G + + C S I Y + LG+ G A FNLS+T H SG Y C+A
Sbjct: 580 GDLLELHCEAPRGSPPILYWFYHEDVTLGSSSAPSGGEASFNLSLTAEH-SGNYSCEANN 638
Query: 108 TSCSKYSRDFSFTIVDPVTSPVLNIMV--IQTETDRHITLHCLSVNGSLPINYTFFENHV 165
+++S S +++ PV+ P+L Q + LHC ++ GS PI Y F+ V
Sbjct: 639 GLVAQHSDTISLSVIVPVSRPILTFRAPRAQAVVGDLLELHCEALRGSSPILYWFYHEDV 698
Query: 166 AISPAISKYDREPAEFN--LTKKNPGEEEEYRCEAKNRLPNYATYSHPVTMPSTGGDSCP 223
+ IS A FN LT ++ G Y CEA N L A S VT+ S P
Sbjct: 699 TLG-KISAPSGGGASFNLSLTTEHSG---IYSCEADNGLE--AQRSEMVTLKVAVPVSRP 752
Query: 224 FCLKLLLPG 232
L L PG
Sbjct: 753 -VLTLRAPG 760
Score = 60.8 bits (146), Expect = 2e-09
Identities = 52/173 (30%), Positives = 75/173 (43%), Gaps = 10/173 (5%)
Query: 35 PSPCLDSKTKVVMKGQNVSMFCSHKNKSLQITYSLFRRKTHLGTQDGKGEPAI-FNLSIT 93
P L S + +G V++ C + S QI Y + L + + F+ S+T
Sbjct: 473 PVLTLSSAEALTFEGATVTLHCEVQRGSPQILYQFYHEDMPLWSSSTPSVGRVSFSFSLT 532
Query: 94 EAHESGPYKCKAQVTSCSKYSRDFSFTIVDPVTSPVLNIMV--IQTETDRHITLHCLSVN 151
E H SG Y C A + S S + PV+ P+L + V Q + LHC +
Sbjct: 533 EGH-SGNYYCTADNGFGPQRSEVVSLFVTVPVSRPILTLRVPRAQAVVGDLLELHCEAPR 591
Query: 152 GSLPINYTFFENHVAISPAISKYDREPAEFN--LTKKNPGEEEEYRCEAKNRL 202
GS PI Y F+ V + + + E A FN LT ++ G Y CEA N L
Sbjct: 592 GSPPILYWFYHEDVTLGSSSAPSGGE-ASFNLSLTAEHSG---NYSCEANNGL 640
Score = 59.3 bits (142), Expect = 5e-09
Identities = 69/239 (28%), Positives = 98/239 (41%), Gaps = 17/239 (7%)
Query: 49 GQNVSMFCSHKNKSLQITYSLFRRKTHLGTQDG-KGEPAIFNLSITEAHESGPYKCKAQV 107
G + + C S I Y + LG G A FNLS+T H SG Y C+A
Sbjct: 673 GDLLELHCEALRGSSPILYWFYHEDVTLGKISAPSGGGASFNLSLTTEH-SGIYSCEADN 731
Query: 108 TSCSKYSRDFSFTIVDPVTSPVLNIMVIQTET--DRHITLHCLSVNGSLPINYTFFENHV 165
++ S + + PV+ PVL + T + LHC ++ GS I Y FF V
Sbjct: 732 GLEAQRSEMVTLKVAVPVSRPVLTLRAPGTHAAVGDLLELHCEALRGSPLILYRFFHEDV 791
Query: 166 AISPAISKYDREPAEFNLTKKNPGEEEEYRCEAKNRLPNYATYSHPVTMPSTG---GDSC 222
+ S +LT ++ G Y CEA N L A S VT+ TG S
Sbjct: 792 TLGNRSSPSGGASLNLSLTAEHSG---NYSCEADNGLG--AQRSETVTLYITGLTANRSG 846
Query: 223 PFCLKLLLPGLLLL--LVVIILILAFWVLPKYKTRKAMRNNVPRDRGDTAMEVGIYANI 279
PF + GLL + L L+L W+ K + A ++ R D+ + Y N+
Sbjct: 847 PFATG-VAGGLLSIAGLAAGALLLYCWLSRKAGRKPA--SDPARSPSDSDSQEPTYHNV 902
Score = 54.3 bits (129), Expect = 2e-07
Identities = 45/166 (27%), Positives = 69/166 (41%), Gaps = 8/166 (4%)
Query: 39 LDSKTKVVMKGQNVSMFCSHKNKSLQITYSLFRRKTHLGTQDGKGEPAI-FNLSITEAHE 97
L S ++ +G V++ C + SL I Y L + + + S+T H
Sbjct: 384 LSSPEDLIFEGAKVTLHCEAQRGSLPILYQFHHEGAALERRSANSAGGVAISFSLTAEH- 442
Query: 98 SGPYKCKAQVTSCSKYSRDFSFTIVDPVTSPVLNIMVIQTET--DRHITLHCLSVNGSLP 155
SG Y C A + S+ S ++ PV+ PVL + + T +TLHC GS
Sbjct: 443 SGNYYCTADNGFGPQRSKAVSLSVTVPVSHPVLTLSSAEALTFEGATVTLHCEVQRGSPQ 502
Query: 156 INYTFFENHVAI-SPAISKYDREPAEFNLTKKNPGEEEEYRCEAKN 200
I Y F+ + + S + R F+LT+ G Y C A N
Sbjct: 503 ILYQFYHEDMPLWSSSTPSVGRVSFSFSLTE---GHSGNYYCTADN 545
Score = 53.9 bits (128), Expect = 2e-07
Identities = 46/172 (26%), Positives = 73/172 (42%), Gaps = 12/172 (6%)
Query: 35 PSPCLDSKTKVVMKGQNVSMFCSHKNKSLQITYSLFRRKT---HLGTQDGKGEPAIFNLS 91
P L + + +G V++ C + SL+ Y + H + +G F+L+
Sbjct: 287 PVLTLSPEKALNFEGTKVTLHCETQEDSLRTLYRFYHEGVPLRHKSVRCERGASISFSLT 346
Query: 92 ITEAHESGPYKCKAQVTSCSKYSRDFSFTIVDPVTSPVLNIMVIQTET--DRHITLHCLS 149
SG Y C A +K S+ S ++ PV+ PVLN+ + +TLHC +
Sbjct: 347 ---TENSGNYYCTADNGLGAKPSKAVSLSVTVPVSHPVLNLSSPEDLIFEGAKVTLHCEA 403
Query: 150 VNGSLPINYTFFENHVAIS-PAISKYDREPAEFNLTKKNPGEEEEYRCEAKN 200
GSLPI Y F A+ + + F+LT ++ G Y C A N
Sbjct: 404 QRGSLPILYQFHHEGAALERRSANSAGGVAISFSLTAEHSG---NYYCTADN 452
Score = 33.1 bits (74), Expect = 0.37
Identities = 28/123 (22%), Positives = 56/123 (45%), Gaps = 9/123 (7%)
Query: 46 VMKGQNVSMFCSHKNKSLQITYSLFRRKTHLGTQDGKGEPAIFNLSITEAHESGPYKCKA 105
V +G +V + C K + + + ++++ L + + + F++ ++G Y+C
Sbjct: 113 VFEGDSVVLRCRAKAE-VTLNNTIYKNDNVLAFLNKRTD---FHIPHACLKDNGAYRCTG 168
Query: 106 QVTSCSKYSRD-FSFTIVDPVTSPVLNIMVIQTETDRHITLHC---LSVNGS-LPINYTF 160
SC S + + +P T PVL Q + +TL C LS+ S +P+ + F
Sbjct: 169 YKESCCPVSSNTVKIQVQEPFTRPVLRASSFQPISGNPVTLTCETQLSLERSDVPLRFRF 228
Query: 161 FEN 163
F +
Sbjct: 229 FRD 231
>gi|19923629 Fc receptor-like 2 precursor [Homo sapiens]
Length = 508
Score = 58.9 bits (141), Expect = 6e-09
Identities = 57/225 (25%), Positives = 96/225 (42%), Gaps = 10/225 (4%)
Query: 46 VMKGQNVSMFCSHKNKSLQITYSLFRRKT--HLGTQDGKGEPAIFNLSITEAHESGPYKC 103
V +GQ + + CS + +T+S +R T +G + + A + + ++G Y C
Sbjct: 216 VTEGQKLILLCSVAGGTGNVTFSWYREATGTSMGKKTQRSLSAELEIPAVKESDAGKYYC 275
Query: 104 KAQVTSCSKYSRDFSFTIVDPVTSPVLNIMV--IQTETDRHITLHCLSVNGSLPINYTFF 161
+A S+ + + PV+ PVL + Q + LHC ++ GS PI Y F+
Sbjct: 276 RADNGHVPIQSKVVNIPVRIPVSRPVLTLRSPGAQAAVGDLLELHCEALRGSPPILYQFY 335
Query: 162 ENHVAISPAISKYDREPAEFN--LTKKNPGEEEEYRCEAKNRLPNYATYSHPVTMPSTGG 219
V + + S A FN LT ++ G Y CEA N L + + PV++ G
Sbjct: 336 HEDVTLGNS-SAPSGGGASFNLSLTAEHSG---NYSCEANNGLGAQCSEAVPVSISGPDG 391
Query: 220 DSCPFCLKLLLPGLLLLLVVIILILAFWVLPKYKTRKAMRNNVPR 264
+L GL +L + L + L + ++ N PR
Sbjct: 392 YRRDLMTAGVLWGLFGVLGFTGVALLLYALFHKISGESSATNEPR 436
>gi|110347451 platelet/endothelial cell adhesion molecule [Homo
sapiens]
Length = 738
Score = 55.8 bits (133), Expect = 5e-08
Identities = 57/227 (25%), Positives = 98/227 (43%), Gaps = 22/227 (9%)
Query: 46 VMKGQNVSMFCSHKNKSLQITYSLFRRKTHL-GTQDGKGEPAIFNLSITEAHESGPYKCK 104
V+KGQ + + C + +L I+Y L + L + +PA+F + TE E Y+C
Sbjct: 421 VIKGQTIEVRCESISGTLPISYQLLKTSKVLENSTKNSNDPAVFKDNPTEDVE---YQCV 477
Query: 105 AQVTSCSKYSRDFSFTI-------VDPVTSPVLNIMVIQTETDRHITLHCLSVNGSLPIN 157
A +C +++ S + VD V +L+ V+++ D I L C GS PI
Sbjct: 478 AD--NCHSHAKMLSEVLRVKVIAPVDEVQISILSSKVVESGED--IVLQCAVNEGSGPIT 533
Query: 158 YTFFENHVAISPAISKYDREPAEFNLTKKNPGEEEEYRCEAKNRLPNYATYSHPVTMPST 217
Y F+ + A + K + +E EY C A NR +H ++P +
Sbjct: 534 YKFYREKEGKPFYQMTSNATQAFWTKQKASKEQEGEYYCTAFNRA------NHASSVPRS 587
Query: 218 GGDSCPFCLKLLLPGLLLLLVVIILILAFWVLPK-YKTRKAMRNNVP 263
+ L GL+ ++++ ++I + K Y RKA +P
Sbjct: 588 KILTVRVILAPWKKGLIAVVIIGVIIALLIIAAKCYFLRKAKAKQMP 634
Score = 50.4 bits (119), Expect = 2e-06
Identities = 45/175 (25%), Positives = 79/175 (45%), Gaps = 21/175 (12%)
Query: 31 TNEFPSPCLDSKTKVVMKGQNVSMFCSHKNKSLQITYSLFRRKTHLG-TQDGKGEPAIFN 89
T F P L+S + +G+ +++ CS +++ + T + TQD
Sbjct: 322 TELFSKPELESSFTHLDQGERLNLSCSIPGAP-PANFTIQKEDTIVSQTQDFT------- 373
Query: 90 LSITEAHESGPYKCKAQVTSCSKYSRDFSFTIVDPVTSPVLN----IMVIQTETDRHITL 145
I +SG Y C A + K S + + ++ P ++ VI+ +T I +
Sbjct: 374 -KIASKSDSGTYICTAGIDKVVKKSNTVQIVVCEMLSQPRISYDAQFEVIKGQT---IEV 429
Query: 146 HCLSVNGSLPINYTFFENHVAISPAISKYDREPAEFNLTKKNPGEEEEYRCEAKN 200
C S++G+LPI+Y + + + +K +PA F K NP E+ EY+C A N
Sbjct: 430 RCESISGTLPISYQLLKTSKVLENS-TKNSNDPAVF---KDNPTEDVEYQCVADN 480
Score = 28.5 bits (62), Expect = 9.1
Identities = 23/109 (21%), Positives = 51/109 (46%), Gaps = 6/109 (5%)
Query: 96 HESGPYKCKAQVTSCSKYSRDFSFTIVDPVTSPVLNIMVIQTETDRHITLHCLSVNGSLP 155
++SG YKC V + K + ++ +V+ V SP + + + + ++C P
Sbjct: 102 YDSGTYKCTVIVNNKEKTTAEYQL-LVEGVPSPRVTLDKKEAIQGGIVRVNCSVPEEKAP 160
Query: 156 INYTFFENHVAISPAISKYDREPAEFN-LTKKNPGEEEE----YRCEAK 199
I++T + + K ++ + N + + P EE++ +RC+A+
Sbjct: 161 IHFTIEKLELNEKMVKLKREKNSRDQNFVILEFPVEEQDRVLSFRCQAR 209
>gi|226958547 Fc receptor-like 1 isoform 2 precursor [Homo sapiens]
Length = 366
Score = 50.1 bits (118), Expect = 3e-06
Identities = 51/179 (28%), Positives = 75/179 (41%), Gaps = 12/179 (6%)
Query: 46 VMKGQNVSMFCSHKNKSLQITYSLFRRKTHLGTQDGKGEPAIFNLSITEAHESGP--YKC 103
VM+G + + CS + IT+ ++ L Q I ES Y C
Sbjct: 124 VMEGDRLVLICSVAMGTGDITFLWYKGAVGLNLQSKTQRSLTAEYEIPSVRESDAEQYYC 183
Query: 104 KAQVTSCSKYSRDFSFTIVDPVTSPVLNIMV--IQTETDRHITLHCLSVNGSLPINYTFF 161
A+ S S T+ PV+ P+L + Q + + LHC ++ GS PI Y F+
Sbjct: 184 VAENGYGPSPSGLVSITVRIPVSRPILMLRAPRAQAAVEDVLELHCEALRGSPPILYWFY 243
Query: 162 ENHVAISPAISKYDREPAEFN--LTKKNPGEEEEYRCEAKNRLPNYATYSHPVTMPSTG 218
+ + + S A FN LT+++ G Y CEA N L A S VT+ TG
Sbjct: 244 HEDITLG-SRSAPSGGGASFNLSLTEEHSG---NYSCEANNGLG--AQRSEAVTLNFTG 296
>gi|226958551 Fc receptor-like 1 isoform 3 precursor [Homo sapiens]
Length = 428
Score = 47.8 bits (112), Expect = 1e-05
Identities = 50/178 (28%), Positives = 74/178 (41%), Gaps = 12/178 (6%)
Query: 46 VMKGQNVSMFCSHKNKSLQITYSLFRRKTHLGTQDGKGEPAIFNLSITEAHESGP--YKC 103
VM+G + + CS + IT+ ++ L Q I ES Y C
Sbjct: 124 VMEGDRLVLICSVAMGTGDITFLWYKGAVGLNLQSKTQRSLTAEYEIPSVRESDAEQYYC 183
Query: 104 KAQVTSCSKYSRDFSFTIVDPVTSPVLNIMV--IQTETDRHITLHCLSVNGSLPINYTFF 161
A+ S S T+ PV+ P+L + Q + + LHC ++ GS PI Y F+
Sbjct: 184 VAENGYGPSPSGLVSITVRIPVSRPILMLRAPRAQAAVEDVLELHCEALRGSPPILYWFY 243
Query: 162 ENHVAISPAISKYDREPAEFN--LTKKNPGEEEEYRCEAKNRLPNYATYSHPVTMPST 217
+ + + S A FN LT+++ G Y CEA N L A S VT+ T
Sbjct: 244 HEDITLG-SRSAPSGGGASFNLSLTEEHSG---NYSCEANNGLG--AQRSEAVTLNFT 295
>gi|16418419 Fc receptor-like 1 isoform 1 precursor [Homo sapiens]
Length = 429
Score = 47.8 bits (112), Expect = 1e-05
Identities = 50/178 (28%), Positives = 74/178 (41%), Gaps = 12/178 (6%)
Query: 46 VMKGQNVSMFCSHKNKSLQITYSLFRRKTHLGTQDGKGEPAIFNLSITEAHESGP--YKC 103
VM+G + + CS + IT+ ++ L Q I ES Y C
Sbjct: 124 VMEGDRLVLICSVAMGTGDITFLWYKGAVGLNLQSKTQRSLTAEYEIPSVRESDAEQYYC 183
Query: 104 KAQVTSCSKYSRDFSFTIVDPVTSPVLNIMV--IQTETDRHITLHCLSVNGSLPINYTFF 161
A+ S S T+ PV+ P+L + Q + + LHC ++ GS PI Y F+
Sbjct: 184 VAENGYGPSPSGLVSITVRIPVSRPILMLRAPRAQAAVEDVLELHCEALRGSPPILYWFY 243
Query: 162 ENHVAISPAISKYDREPAEFN--LTKKNPGEEEEYRCEAKNRLPNYATYSHPVTMPST 217
+ + + S A FN LT+++ G Y CEA N L A S VT+ T
Sbjct: 244 HEDITLG-SRSAPSGGGASFNLSLTEEHSG---NYSCEANNGLG--AQRSEAVTLNFT 295
>gi|8393638 F11 receptor precursor [Homo sapiens]
Length = 299
Score = 40.0 bits (92), Expect = 0.003
Identities = 54/226 (23%), Positives = 93/226 (41%), Gaps = 34/226 (15%)
Query: 34 FPSPCLDSKTKVVMKGQNVSMFCSHKNKSLQITYSLFRRKTHLGTQDGKGEPAIFNLSIT 93
F SP ++ K +G + C + NK IT S R T L T I S+T
Sbjct: 55 FSSPRVEWKFD---QGDTTRLVC-YNNK---ITASYEDRVTFLPT-------GITFKSVT 100
Query: 94 EAHESGPYKCKAQVTSCSKYSR-DFSFTIVDPVTSPVLNIMVIQTETDRHITLHCLSVNG 152
++G Y C + Y ++ P + P +NI T +R + L C +G
Sbjct: 101 R-EDTGTYTCMVSEEGGNSYGEVKVKLIVLVPPSKPTVNIPSSATIGNRAV-LTCSEQDG 158
Query: 153 SLPINYTFFENHVAISP--------AISKYDREP--AEFNLTKKNPGEEEEYRCEAKNRL 202
S P YT+F++ + + + S Y P E + + EY CEA+N
Sbjct: 159 SPPSEYTWFKDGIVMPTNPKSTRAFSNSSYVLNPTTGELVFDPLSASDTGEYSCEARN-- 216
Query: 203 PNYATYSHPVTMPSTGGDSCPFCLKLLLPGLLLLLVVI-ILILAFW 247
Y P+T + ++ + +++ +L+ L+++ IL+ W
Sbjct: 217 ----GYGTPMTSNAVRMEAVERNVGVIVAAVLVTLILLGILVFGIW 258
>gi|157168355 CD22 molecule [Homo sapiens]
Length = 847
Score = 37.0 bits (84), Expect = 0.026
Identities = 46/213 (21%), Positives = 82/213 (38%), Gaps = 32/213 (15%)
Query: 2 WSHLNRLLFWSIFSSVTCRKA-----VLDCEAMKTNEFPSPCLDSKTK----VVMKGQNV 52
WSH ++ VTC+ L + ++ N +P L+ K +V +G +V
Sbjct: 210 WSHHGKI--------VTCQLQDADGKFLSNDTVQLNVKHTPKLEIKVTPSDAIVREGDSV 261
Query: 53 SMFCSHKNKSLQITYSLFRRKTHLGTQDGKGEPAIFNLSITEAHESGPYKCKAQVTSCSK 112
+M C + + + T + + GT K NL +SG Y C+
Sbjct: 262 TMTCEVSSSNPEYTTVSWLKD---GTSLKKQNTFTLNLREVTKDQSGKYCCQVSNDVGPG 318
Query: 113 YSRDFSFTIV---DPVTSPVLNIMVIQTETDRHITLHCLSVNGSLPINYTFFENHVAISP 169
S + + +P T +L+ ++ + C+S+ LP NYT++ N +
Sbjct: 319 RSEEVFLQVQYAPEPSTVQILHSPAVEGS---QVEFLCMSLANPLPTNYTWYHNGKEMQ- 374
Query: 170 AISKYDREPAEFNLTKKNPGEEEEYRCEAKNRL 202
R + ++ K P Y C A+N L
Sbjct: 375 -----GRTEEKVHIPKILPWHAGTYSCVAENIL 402
>gi|13489095 sialoadhesin precursor [Homo sapiens]
Length = 1709
Score = 37.0 bits (84), Expect = 0.026
Identities = 38/170 (22%), Positives = 66/170 (38%), Gaps = 17/170 (10%)
Query: 46 VMKGQNVSMFCSHKNKS-LQITYSLFRRKTHLGTQDGKGEPAIFNLSITEAHESGPYKCK 104
+++ Q V++ C+ N++ + YS + K H+ +D L + ++G Y C+
Sbjct: 336 ILENQTVTLVCNTPNEAPSDLRYSWY--KNHVLLEDAHSHT--LRLHLATRADTGFYFCE 391
Query: 105 AQVTSCSKYSRDFSFTIVDPVTSPVLNIMVIQTETDRHITLHCLSVNGSLPINYTFFENH 164
Q S+ S S + P +PVL ++T+ LHC V+ L H
Sbjct: 392 VQNVHGSERSGPVSVVVNHPPLTPVLTAF-LETQAGLVGILHCSVVSEPLATLVLSHGGH 450
Query: 165 VAISPAISKYDREP----------AEFNLTKKNPGEEEEYRCEAKNRLPN 204
+ S + D P + + EY+C A N L N
Sbjct: 451 ILASTS-GDSDHSPRFSGTSGPNSLRLEIRDLEETDSGEYKCSATNSLGN 499
>gi|226342990 SLAM family member 9 isoform 1 [Homo sapiens]
Length = 289
Score = 36.2 bits (82), Expect = 0.044
Identities = 28/88 (31%), Positives = 38/88 (43%), Gaps = 19/88 (21%)
Query: 184 TKKNPGEEE-EYRCEAKNRLPN-----------YATYSHPVTMPSTGGDSCPFCLKLLLP 231
T PG+ Y C A N + N YA ++ PST FCL L
Sbjct: 187 TSWRPGDSALSYTCRANNPISNVSSCPIPDGPFYADPNYASEKPSTA-----FCL--LAK 239
Query: 232 GLLLLLVVIILILAFWVLPKYKTRKAMR 259
GLL+ L+++IL + WV+ K K R
Sbjct: 240 GLLIFLLLVILAMGLWVIRVQKRHKMPR 267
>gi|118572606 hemicentin 1 [Homo sapiens]
Length = 5635
Score = 36.2 bits (82), Expect = 0.044
Identities = 30/104 (28%), Positives = 45/104 (43%), Gaps = 3/104 (2%)
Query: 97 ESGPYKCKAQVTSCSKYSRDFSFTIVDPVTSPVLNIMVIQTETDRHITLHCLSVNGSLPI 156
++G Y C AQ + + + V PV SP L VI D+ ITL C +G P
Sbjct: 4052 DAGTYMCVAQNPAGTALGKIKLNVQVPPVISPHLKEYVIAV--DKPITLSC-EADGLPPP 4108
Query: 157 NYTFFENHVAISPAISKYDREPAEFNLTKKNPGEEEEYRCEAKN 200
+ T+ ++ AI +I + + PG+ Y C A N
Sbjct: 4109 DITWHKDGRAIVESIRQRVLSSGSLQIAFVQPGDAGHYTCMAAN 4152
>gi|59939900 opioid binding protein/cell adhesion molecule-like
isoform b preproprotein [Homo sapiens]
Length = 338
Score = 34.7 bits (78), Expect = 0.13
Identities = 39/203 (19%), Positives = 76/203 (37%), Gaps = 21/203 (10%)
Query: 10 FWSIFSSVTCRKAVLDCEAMKTNEFPSPCLDSKTKVVMKGQNVSMFCSHKNKSLQITYSL 69
+W +FS+ T + + +D+ T V +G++ ++ C+ ++ ++ +
Sbjct: 6 YWVVFSATTALLFIPGVPVRSGDATFPKAMDNVT--VRQGESATLRCTIDDRVTRVAWLN 63
Query: 70 FRRKTHLGTQDGKGEPAIFNLSIT-----------EAHESGPYKCKAQVTSCSKYSRDFS 118
+ G +P + L T + ++ GPY C Q + K SR
Sbjct: 64 RSTILYAGNDKWSIDPRVIILVNTPTQYSIMIQNVDVYDEGPYTCSVQTDNHPKTSRVHL 123
Query: 119 FTIVDPVTSPVLNIMV-IQTETDRHITLHCLSVNGSLPINYTFFENHVAISPAISKYDRE 177
V P ++NI I +TL CL++ P T H+++ + E
Sbjct: 124 IVQVPP---QIMNISSDITVNEGSSVTLLCLAIGRPEP---TVTWRHLSVKEG-QGFVSE 176
Query: 178 PAEFNLTKKNPGEEEEYRCEAKN 200
++ + EY C A N
Sbjct: 177 DEYLEISDIKRDQSGEYECSALN 199
>gi|11225258 myelin associated glycoprotein isoform a precursor
[Homo sapiens]
Length = 626
Score = 34.3 bits (77), Expect = 0.17
Identities = 40/177 (22%), Positives = 80/177 (45%), Gaps = 12/177 (6%)
Query: 33 EFPSPCLDSKTKV-VMKGQNVSMFC-SHKNKSLQITYSLFRRKTHLGTQDGKGEPAIFNL 90
++P ++ + V ++G +VS+ C + N +T+ R T L ++ E + L
Sbjct: 237 KYPPVIVEMNSSVEAIEGSHVSLLCGADSNPPPLLTW--MRDGTVL--REAVAESLLLEL 292
Query: 91 SITEAHESGPYKCKAQVTSCSKYSRDFSFTIVDPVTSPVLNIMVIQTETDRHITLHCLSV 150
E G Y C A+ + + +R +++ P +N ++ E + +++ C +
Sbjct: 293 EEVTPAEDGVYACLAE-NAYGQDNRTVGLSVMYAPWKPTVNGTMVAVEGET-VSILCSTQ 350
Query: 151 NGSLPINYTFFENHVAISPAISKYDREPAEFNLTKKNPGEEEEYRCEAKNRLPNYAT 207
+ PI T F+ +S I Y+ E + L +P ++ EY C A+N+ AT
Sbjct: 351 SNPDPI-LTIFKEKQILSTVI--YESE-LQLELPAVSPEDDGEYWCVAENQYGQRAT 403
>gi|18104957 myelin associated glycoprotein isoform b precursor
[Homo sapiens]
Length = 582
Score = 34.3 bits (77), Expect = 0.17
Identities = 40/177 (22%), Positives = 80/177 (45%), Gaps = 12/177 (6%)
Query: 33 EFPSPCLDSKTKV-VMKGQNVSMFC-SHKNKSLQITYSLFRRKTHLGTQDGKGEPAIFNL 90
++P ++ + V ++G +VS+ C + N +T+ R T L ++ E + L
Sbjct: 237 KYPPVIVEMNSSVEAIEGSHVSLLCGADSNPPPLLTW--MRDGTVL--REAVAESLLLEL 292
Query: 91 SITEAHESGPYKCKAQVTSCSKYSRDFSFTIVDPVTSPVLNIMVIQTETDRHITLHCLSV 150
E G Y C A+ + + +R +++ P +N ++ E + +++ C +
Sbjct: 293 EEVTPAEDGVYACLAE-NAYGQDNRTVGLSVMYAPWKPTVNGTMVAVEGET-VSILCSTQ 350
Query: 151 NGSLPINYTFFENHVAISPAISKYDREPAEFNLTKKNPGEEEEYRCEAKNRLPNYAT 207
+ PI T F+ +S I Y+ E + L +P ++ EY C A+N+ AT
Sbjct: 351 SNPDPI-LTIFKEKQILSTVI--YESE-LQLELPAVSPEDDGEYWCVAENQYGQRAT 403
>gi|192449445 cartilage intermediate layer protein [Homo sapiens]
Length = 1184
Score = 33.9 bits (76), Expect = 0.22
Identities = 23/74 (31%), Positives = 33/74 (44%), Gaps = 1/74 (1%)
Query: 33 EFPSPCLDSKTKVVMKGQNVSMFCSHKNKSLQITYSLFRRKTHLGTQDGKGEPAIFNLSI 92
E P ++ +TK GQ+VS+ C K Y + T L K E + L
Sbjct: 307 ETPYMVMNPETKARRAGQSVSLCCKATGKPRPDKYFWYHNDTLLDPSLYKHESKLV-LRK 365
Query: 93 TEAHESGPYKCKAQ 106
+ H++G Y CKAQ
Sbjct: 366 LQQHQAGEYFCKAQ 379
>gi|121674801 hepatocyte cell adhesion molecule [Homo sapiens]
Length = 416
Score = 33.9 bits (76), Expect = 0.22
Identities = 35/175 (20%), Positives = 73/175 (41%), Gaps = 9/175 (5%)
Query: 90 LSITEAHESGPYKCKAQVTSCS-KYSRDFSFTIVDPVTSP-VLNIMVIQTETDRHITLHC 147
LS + + G Y+ + +T + + + T+ P++ P VL E TL+C
Sbjct: 109 LSDLQLADEGTYEVEISITDDTFTGEKTINLTVDVPISRPQVLVASTTVLELSEAFTLNC 168
Query: 148 LSVNGSLPINYTFFEN-HVAISPAISKYDREPAEFNLTKKNPGEEEEYRCEAKNRLPNYA 206
NG+ P +YT+ ++ ++ + + +T+ +++ Y C +N +
Sbjct: 169 SHENGTKP-SYTWLKDGKPLLNDSRMLLSPDQKVLTITRVLMEDDDLYSCMVENPISQGR 227
Query: 207 TYSHPVTMPSTGGDSCPFCLKLLLPGLLLLLVVIILILAFWVLPKYKTRKAMRNN 261
+ +T+ +L G + LLV ++ + A W K K +K + N
Sbjct: 228 SLPVKITVYRRSS-----LYIILSTGGIFLLVTLVTVCACWKPSKRKQKKLEKQN 277
>gi|110349719 titin isoform N2-A [Homo sapiens]
Length = 33423
Score = 33.5 bits (75), Expect = 0.28
Identities = 33/120 (27%), Positives = 51/120 (42%), Gaps = 10/120 (8%)
Query: 86 AIFNLSITEAHESGPYKCKAQVTSCSKYSRDFSFTIVDPVTSPVLNIMVIQTETDRHITL 145
A F +S SG Y C+A+ S + +P T + + ++ + L
Sbjct: 4917 ATFQISGARVENSGTYVCEAR-NDAGTASCSIELKVKEPPTF-IRELKPVEVVKYSDVEL 4974
Query: 146 HCLSVNGSLPINYTFFENHVAISPAISKY---DREPAEFNL--TKKNPGEEEEYRCEAKN 200
C V G+ P T+ +N+ I + KY DR FNL TK +P + EY+C N
Sbjct: 4975 EC-EVTGTPPFEVTWLKNNREIRSS-KKYTLTDRVSV-FNLHITKCDPSDTGEYQCIVSN 5031
>gi|226342992 SLAM family member 9 isoform 2 [Homo sapiens]
Length = 198
Score = 32.3 bits (72), Expect = 0.63
Identities = 22/57 (38%), Positives = 29/57 (50%), Gaps = 12/57 (21%)
Query: 203 PNYATYSHPVTMPSTGGDSCPFCLKLLLPGLLLLLVVIILILAFWVLPKYKTRKAMR 259
PNYA+ PST FCL L GLL+ L+++IL + WV+ K K R
Sbjct: 132 PNYASEK-----PSTA-----FCL--LAKGLLIFLLLVILAMGLWVIRVQKRHKMPR 176
>gi|45594240 limbic system-associated membrane protein [Homo
sapiens]
Length = 338
Score = 32.0 bits (71), Expect = 0.83
Identities = 40/165 (24%), Positives = 66/165 (40%), Gaps = 9/165 (5%)
Query: 41 SKTKVVMKGQNVSMFCSHKNKSLQITYSLFRRKTHLGTQDGKGEPAIFNLSITEAHESGP 100
S V +G NV++ C + + +R T G + E + L IT +SG
Sbjct: 138 SSDVTVNEGSNVTLVCMANGRPEPVI--TWRHLTPTGREFEGEEEYLEILGITR-EQSGK 194
Query: 101 YKCKAQVTSCSKYSRDFSFTIVDPVTSPVLNIMVIQTETDRHITLHCLSVNGSLPINYTF 160
Y+CKA S + T+ P T + + T R +L C + P ++ +
Sbjct: 195 YECKAANEVSSADVKQVKVTVNYPPT--ITESKSNEATTGRQASLKCEASAVPAP-DFEW 251
Query: 161 FENHVAISPAIS-KYDREPAEFNLTKKNPGEEE--EYRCEAKNRL 202
+ + I+ A + + +LT N EE Y C A N+L
Sbjct: 252 YRDDTRINSANGLEIKSTEGQSSLTVTNVTEEHYGNYTCVAANKL 296
>gi|50878302 Fc receptor-like B [Homo sapiens]
Length = 426
Score = 31.6 bits (70), Expect = 1.1
Identities = 33/146 (22%), Positives = 58/146 (39%), Gaps = 28/146 (19%)
Query: 95 AHESGPYKC----KAQVTSCSKYSRDFSFTIVDPVTSPVLNIM-------------VIQT 137
A +SG Y+C + V S +S + T+ + +PVL +M V++
Sbjct: 160 ASDSGRYQCSGTMRIPVESAPMFSAKVAVTVQELFRAPVLRVMGPREARGAALGGVVLRC 219
Query: 138 ETDRHITLHCLSVNGSLPINYTFFENHVAISPAISKYDREPAEFNLTKKNPGEEEEYRCE 197
+T H P+ + F++ S A+ ++D AE+ + + E E Y CE
Sbjct: 220 DTRLH------PQKRDTPLQFAFYK----YSRAVRRFDWG-AEYTVPEPEVEELESYWCE 268
Query: 198 AKNRLPNYATYSHPVTMPSTGGDSCP 223
A + S + +P G P
Sbjct: 269 AATATRSVRKRSPWLQLPGPGSPLDP 294
>gi|194328712 pregnancy specific beta-1-glycoprotein 8 isoform c
[Homo sapiens]
Length = 297
Score = 31.6 bits (70), Expect = 1.1
Identities = 42/229 (18%), Positives = 91/229 (39%), Gaps = 36/229 (15%)
Query: 13 IFSSVTCRKAVLDCEAMKTNEFPSPCLDS-KTKVVMKGQNVSMFCSHKNKSLQITYSLFR 71
+ S+ C + + + T E P P + S K + VS+ C + + +
Sbjct: 3 LLSAPPCTQRITWKGLLLTVETPKPSISSSKLNPREAMEAVSLTCDPETPDASYLWWMNG 62
Query: 72 RKTHLG--TQDGKGEPAIFNLSITEAHESGPYKCKAQVTSCSKYSRDFSFTIVDPVTSPV 129
+ + Q + +F L +T+ + +GPY+C+ + + S F+ ++ + P
Sbjct: 63 QSLPMSHRLQLSETNRTLFLLGVTK-YTAGPYECEIRNPVSASRSDPFTLNLLPKLPKPY 121
Query: 130 LNIMVIQTETDRHIT-----------LHCLSVNG-SLPINYTF---FENHVAISPAISKY 174
+ I ++ ++ + + +NG SLP++ EN + I P++++
Sbjct: 122 ITINNLKPRENKDVLNFTCEPKSENYTYIWWLNGQSLPVSPRVKRPIENRILILPSVTRN 181
Query: 175 DREPAEFNLTKKNPGEEEEYRCEAKNRLPNYATYSHPVTMPSTGGDSCP 223
+ P Y+CE +++ +Y PVT+ G P
Sbjct: 182 ETGP---------------YQCEIRDQYGGIRSY--PVTLNVLYGPDLP 213
>gi|115298665 neurotrimin isoform 2 [Homo sapiens]
Length = 344
Score = 31.2 bits (69), Expect = 1.4
Identities = 39/207 (18%), Positives = 75/207 (36%), Gaps = 20/207 (9%)
Query: 5 LNRLLFWSIFSSVTCRKAVLDCEAMKTNEFPSPCLDSKTKVVMKGQNVSMFCSHKNKSLQ 64
++ + W+IF+ + + +D+ T V +G++ ++ C+ N+ +
Sbjct: 8 MHNSISWAIFTGLAALCLFQGVPVRSGDATFPKAMDNVT--VRQGESATLRCTIDNRVTR 65
Query: 65 ITYSLFRRKTHLGTQDGKGEPAIFNLSITEA-----------HESGPYKCKAQVTSCSKY 113
+ + + G +P + LS T+ ++ GPY C Q + K
Sbjct: 66 VAWLNRSTILYAGNDKWCLDPRVVLLSNTQTQYSIEIQNVDVYDEGPYTCSVQTDNHPKT 125
Query: 114 SRDFSFTIVDPVTSPVLNIMVIQTETDRHITLHCLSVNGSLPINYTFFENHVAISPAISK 173
SR V P + + I +I+L C++ P T H ISP
Sbjct: 126 SRVHLIVQVSPKIVEISS--DISINEGNNISLTCIATGRPEP---TVTWRH--ISPKAVG 178
Query: 174 YDREPAEFNLTKKNPGEEEEYRCEAKN 200
+ E + + +Y C A N
Sbjct: 179 FVSEDEYLEIQGITREQSGDYECSASN 205
>gi|194328710 pregnancy specific beta-1-glycoprotein 8 isoform b
[Homo sapiens]
Length = 419
Score = 31.2 bits (69), Expect = 1.4
Identities = 30/152 (19%), Positives = 65/152 (42%), Gaps = 33/152 (21%)
Query: 87 IFNLSITEAHESGPYKCKAQVTSCSKYSRDFSFTIVDPVTSPVLNIMVIQTETDRHIT-- 144
+F L +T+ + +GPY+C+ + + S F+ ++ + P + I ++ ++ +
Sbjct: 202 LFLLGVTK-YTAGPYECEIRNPVSASRSDPFTLNLLPKLPKPYITINNLKPRENKDVLNF 260
Query: 145 ---------LHCLSVNG-SLPINYTF---FENHVAISPAISKYDREPAEFNLTKKNPGEE 191
+ +NG SLP++ EN + I P++++ + P
Sbjct: 261 TCEPKSENYTYIWWLNGQSLPVSPRVKRPIENRILILPSVTRNETGP------------- 307
Query: 192 EEYRCEAKNRLPNYATYSHPVTMPSTGGDSCP 223
Y+CE +++ +Y PVT+ G P
Sbjct: 308 --YQCEIRDQYGGIRSY--PVTLNVLYGPDLP 335
>gi|51510887 pregnancy specific beta-1-glycoprotein 8 isoform a
[Homo sapiens]
Length = 426
Score = 31.2 bits (69), Expect = 1.4
Identities = 30/152 (19%), Positives = 65/152 (42%), Gaps = 33/152 (21%)
Query: 87 IFNLSITEAHESGPYKCKAQVTSCSKYSRDFSFTIVDPVTSPVLNIMVIQTETDRHIT-- 144
+F L +T+ + +GPY+C+ + + S F+ ++ + P + I ++ ++ +
Sbjct: 202 LFLLGVTK-YTAGPYECEIRNPVSASRSDPFTLNLLPKLPKPYITINNLKPRENKDVLNF 260
Query: 145 ---------LHCLSVNG-SLPINYTF---FENHVAISPAISKYDREPAEFNLTKKNPGEE 191
+ +NG SLP++ EN + I P++++ + P
Sbjct: 261 TCEPKSENYTYIWWLNGQSLPVSPRVKRPIENRILILPSVTRNETGP------------- 307
Query: 192 EEYRCEAKNRLPNYATYSHPVTMPSTGGDSCP 223
Y+CE +++ +Y PVT+ G P
Sbjct: 308 --YQCEIRDQYGGIRSY--PVTLNVLYGPDLP 335
>gi|221316762 neurotrimin isoform 4 [Homo sapiens]
Length = 316
Score = 30.8 bits (68), Expect = 1.8
Identities = 34/166 (20%), Positives = 61/166 (36%), Gaps = 18/166 (10%)
Query: 46 VMKGQNVSMFCSHKNKSLQITYSLFRRKTHLGTQDGKGEPAIFNLSITEA---------- 95
V +G++ ++ C+ N+ ++ + + G +P + LS T+
Sbjct: 47 VRQGESATLRCTIDNRVTRVAWLNRSTILYAGNDKWCLDPRVVLLSNTQTQYSIEIQNVD 106
Query: 96 -HESGPYKCKAQVTSCSKYSRDFSFTIVDPVTSPVLNIMVIQTETDRHITLHCLSVNGSL 154
++ GPY C Q + K SR V P + + I +I+L C++
Sbjct: 107 VYDEGPYTCSVQTDNHPKTSRVHLIVQVSPKIVEISS--DISINEGNNISLTCIATGRPE 164
Query: 155 PINYTFFENHVAISPAISKYDREPAEFNLTKKNPGEEEEYRCEAKN 200
P T H ISP + E + + +Y C A N
Sbjct: 165 P---TVTWRH--ISPKAVGFVSEDEYLEIQGITREQSGDYECSASN 205
>gi|221316757 neurotrimin isoform 3 [Homo sapiens]
Length = 355
Score = 30.8 bits (68), Expect = 1.8
Identities = 34/166 (20%), Positives = 61/166 (36%), Gaps = 18/166 (10%)
Query: 46 VMKGQNVSMFCSHKNKSLQITYSLFRRKTHLGTQDGKGEPAIFNLSITEA---------- 95
V +G++ ++ C+ N+ ++ + + G +P + LS T+
Sbjct: 47 VRQGESATLRCTIDNRVTRVAWLNRSTILYAGNDKWCLDPRVVLLSNTQTQYSIEIQNVD 106
Query: 96 -HESGPYKCKAQVTSCSKYSRDFSFTIVDPVTSPVLNIMVIQTETDRHITLHCLSVNGSL 154
++ GPY C Q + K SR V P + + I +I+L C++
Sbjct: 107 VYDEGPYTCSVQTDNHPKTSRVHLIVQVSPKIVEISS--DISINEGNNISLTCIATGRPE 164
Query: 155 PINYTFFENHVAISPAISKYDREPAEFNLTKKNPGEEEEYRCEAKN 200
P T H ISP + E + + +Y C A N
Sbjct: 165 P---TVTWRH--ISPKAVGFVSEDEYLEIQGITREQSGDYECSASN 205
>gi|4505505 opioid binding protein/cell adhesion molecule-like
isoform a preproprotein [Homo sapiens]
Length = 345
Score = 30.8 bits (68), Expect = 1.8
Identities = 33/167 (19%), Positives = 63/167 (37%), Gaps = 19/167 (11%)
Query: 46 VMKGQNVSMFCSHKNKSLQITYSLFRRKTHLGTQDGKGEPAIFNLSIT-----------E 94
V +G++ ++ C+ ++ ++ + + G +P + L T +
Sbjct: 47 VRQGESATLRCTIDDRVTRVAWLNRSTILYAGNDKWSIDPRVIILVNTPTQYSIMIQNVD 106
Query: 95 AHESGPYKCKAQVTSCSKYSRDFSFTIVDPVTSPVLNIMV-IQTETDRHITLHCLSVNGS 153
++ GPY C Q + K SR V P ++NI I +TL CL++
Sbjct: 107 VYDEGPYTCSVQTDNHPKTSRVHLIVQVPP---QIMNISSDITVNEGSSVTLLCLAIGRP 163
Query: 154 LPINYTFFENHVAISPAISKYDREPAEFNLTKKNPGEEEEYRCEAKN 200
P T H+++ + E ++ + EY C A N
Sbjct: 164 EP---TVTWRHLSVKEG-QGFVSEDEYLEISDIKRDQSGEYECSALN 206
>gi|21314600 carcinoembryonic antigen-related cell adhesion molecule
8 [Homo sapiens]
Length = 349
Score = 30.8 bits (68), Expect = 1.8
Identities = 25/122 (20%), Positives = 53/122 (43%), Gaps = 10/122 (8%)
Query: 79 QDGKGEPAIFNLSITEAHESGPYKCKAQVTSCSKYSRDFSFTIVDPVTSPVLNIMVIQTE 138
Q G + LS+T ++ GPY+C+ Q + + +S + ++ +P ++
Sbjct: 192 QLSNGNRTLTLLSVTR-NDVGPYECEIQNPASANFSDPVTLNVLYGPDAPTISPSDTYYH 250
Query: 139 TDRHITLHCLSVNGSLPINYTFFENHVAISPAISKYDREPAEFNLTKKNPGEEEEYRCEA 198
++ L C + + P Y++ +++ +Y ++ N+T KN G Y C
Sbjct: 251 AGVNLNLSCHAASNP-PSQYSW-----SVNGTFQQYTQKLFIPNITTKNSG---SYACHT 301
Query: 199 KN 200
N
Sbjct: 302 TN 303
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.318 0.132 0.400
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,862,565
Number of Sequences: 37866
Number of extensions: 628037
Number of successful extensions: 1788
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 48
Number of HSP's that attempted gapping in prelim test: 1738
Number of HSP's gapped (non-prelim): 76
length of query: 343
length of database: 18,247,518
effective HSP length: 103
effective length of query: 240
effective length of database: 14,347,320
effective search space: 3443356800
effective search space used: 3443356800
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.