Guide to the Human Genome
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Name: FCRL1 Sequence: fasta or formatted (366aa) NCBI GI: 226958547
Description:

Fc receptor-like 1 isoform 2 precursor

Referenced in:

Fc Receptors

Other entries for this name:
alt prot [429aa] Fc receptor-like 1 isoform 1 precursor
alt prot [428aa] Fc receptor-like 1 isoform 3 precursor
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.7         28           2
 C cysteine            2.5          9           1
 D aspartate           2.7         10           1
 E glutamate           6.8         25           2
 F phenylalanine       3.3         12           2
 G glycine             7.1         26           3
 H histidine           2.2          8           1
 I isoleucine          3.8         14           1
 K lysine              2.2          8           1
 L leucine            10.1         37           4
 M methionine          1.9          7           1
 N asparagine          2.7         10           2
 P proline             8.5         31           2
 Q glutamine           5.7         21           2
 R arginine            6.8         25           2
 S serine             10.4         38           3
 T threonine           5.2         19           1
 V valine              5.5         20           1
 W tryptophan          1.9          7           1
 Y tyrosine            3.0         11           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   Fc receptor-like 1 isoform 2 precursor 
FCRL1                 0.872   Fc receptor-like 1 isoform 1 precursor 
FCRL1                 0.872   Fc receptor-like 1 isoform 3 precursor 
FCRL2                 0.488   Fc receptor-like 2 precursor 
FCRL3                 0.434   Fc receptor-like 3 precursor 
FCRL5                 0.251   Fc receptor-like 5 
FCRL4                 0.212   Fc receptor-like 4 precursor 
FCRL6                 0.120   Fc receptor-like 6 
BOC                   0.059   brother of CDO 
SIGLEC1               0.058   sialoadhesin precursor 
TTN                   0.055   titin isoform N2-A 
HMCN2                 0.055   PREDICTED: hemicentin 2 
HMCN2                 0.055   PREDICTED: hemicentin 2 
HMCN2                 0.055   PREDICTED: hemicentin 2 
LOC100292387          0.052   PREDICTED: similar to hemicentin 2 
CD22                  0.051   CD22 molecule 
CADM1                 0.051   immunoglobulin superfamily, member 4D isoform 2 [Ho...
CADM1                 0.050   immunoglobulin superfamily, member 4D isoform 1 [Ho...
HSPG2                 0.050   heparan sulfate proteoglycan 2 
PTK7                  0.048   PTK7 protein tyrosine kinase 7 isoform a precursor [...
PTK7                  0.048   PTK7 protein tyrosine kinase 7 isoform d precursor [...
HMCN1                 0.047   hemicentin 1 
IGLON5                0.046   IgLON family member 5 
ROBO1                 0.044   roundabout 1 isoform d 
ROBO1                 0.044   roundabout 1 isoform c 
ROBO1                 0.044   roundabout 1 isoform b 
LOC642132             0.044   PREDICTED: similar to roundabout 1 isoform 1 
LOC642132             0.044   PREDICTED: similar to roundabout 1 isoform 2 
ROBO1                 0.044   roundabout 1 isoform a 
CEACAM5               0.043   carcinoembryonic antigen-related cell adhesion molec...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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