PCDHGA1 692

Name: PCDHGA1	Sequence: fasta or formatted (931aa)		NCBI GI: 11056032
Description: protocadherin gamma subfamily A, 1 isoform 1 precursor		Referenced in: Cadherins and Related Proteins
Other entries for this name: alt prot [823aa] protocadherin gamma subfamily A, 1 isoform 2 precursor
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.9 74 4 C cysteine 0.8 7 1 D aspartate 6.9 64 2 E glutamate 5.5 51 3 F phenylalanine 3.3 31 1 G glycine 7.3 68 3 H histidine 2.1 20 2 I isoleucine 4.6 43 2 K lysine 3.8 35 3 L leucine 11.1 103 3 M methionine 1.9 18 1 N asparagine 4.9 46 2 P proline 6.0 56 2 Q glutamine 5.0 47 2 R arginine 4.2 39 2 S serine 8.6 80 2 T threonine 5.8 54 2 V valine 6.9 64 2 W tryptophan 0.4 4 1 Y tyrosine 2.9 27 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 protocadherin gamma subfamily A, 1 isoform 1 precurs... PCDHGA1 0.860 protocadherin gamma subfamily A, 1 isoform 2 precurs... PCDHGA2 0.765 protocadherin gamma subfamily A, 2 isoform 1 precurs... PCDHGA5 0.747 protocadherin gamma subfamily A, 5 isoform 1 precurs... PCDHGA3 0.746 protocadherin gamma subfamily A, 3 isoform 1 precurs... PCDHGA6 0.742 protocadherin gamma subfamily A, 6 isoform 1 precurs... PCDHGA10 0.740 protocadherin gamma subfamily A, 10 isoform 1 precur... PCDHGA4 0.732 protocadherin gamma subfamily A, 4 isoform 1 precurs... PCDHGA12 0.730 protocadherin gamma subfamily A, 12 isoform 1 precurs... PCDHGA7 0.728 protocadherin gamma subfamily A, 7 isoform 1 precurs... PCDHGA11 0.727 protocadherin gamma subfamily A, 11 isoform 1 precur... PCDHGA8 0.725 protocadherin gamma subfamily A, 8 isoform 1 precurs... PCDHGA9 0.703 protocadherin gamma subfamily A, 9 isoform 1 precurs... PCDHGA2 0.625 protocadherin gamma subfamily A, 2 isoform 2 precurs... PCDHGA3 0.608 protocadherin gamma subfamily A, 3 isoform 2 precurs... PCDHGA5 0.608 protocadherin gamma subfamily A, 5 isoform 2 precurs... PCDHGA6 0.604 protocadherin gamma subfamily A, 6 isoform 2 precurs... PCDHGA10 0.603 protocadherin gamma subfamily A, 10 isoform 2 precur... PCDHGA12 0.592 protocadherin gamma subfamily A, 12 isoform 2 precur... PCDHGA4 0.592 protocadherin gamma subfamily A, 4 isoform 2 precurs... PCDHGA11 0.591 protocadherin gamma subfamily A, 11 isoform 2 precur... PCDHGA7 0.590 protocadherin gamma subfamily A, 7 isoform 2 precurs... PCDHGA8 0.587 protocadherin gamma subfamily A, 8 isoform 2 precurso... PCDHGA9 0.566 protocadherin gamma subfamily A, 9 isoform 2 precurs... PCDHGB5 0.498 protocadherin gamma subfamily B, 5 isoform 1 precurs... PCDHGB2 0.493 protocadherin gamma subfamily B, 2 isoform 1 precurs... PCDHGB3 0.487 protocadherin gamma subfamily B, 3 isoform 1 precurs... PCDHGB7 0.487 protocadherin gamma subfamily B, 7 isoform 1 precurs... PCDHGB6 0.482 protocadherin gamma subfamily B, 6 isoform 1 precurs... PCDHGB1 0.479 protocadherin gamma subfamily B, 1 isoform 1 precurs... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.