PCDHGA1 3855

Name: PCDHGA1	Sequence: fasta or formatted (823aa)		NCBI GI: 14196459
Description: protocadherin gamma subfamily A, 1 isoform 2 precursor		Referenced in: Cadherins and Related Proteins
Other entries for this name: alt prot [931aa] protocadherin gamma subfamily A, 1 isoform 1 precursor
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.3 60 4 C cysteine 1.1 9 1 D aspartate 7.0 58 1 E glutamate 6.1 50 3 F phenylalanine 3.5 29 1 G glycine 6.1 50 3 H histidine 2.3 19 2 I isoleucine 5.1 42 2 K lysine 3.3 27 2 L leucine 11.9 98 3 M methionine 1.8 15 1 N asparagine 4.9 40 2 P proline 5.8 48 2 Q glutamine 4.6 38 2 R arginine 4.1 34 2 S serine 8.7 72 2 T threonine 5.3 44 2 V valine 7.7 63 2 W tryptophan 0.2 2 1 Y tyrosine 3.0 25 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 protocadherin gamma subfamily A, 1 isoform 2 precurs... PCDHGA1 0.978 protocadherin gamma subfamily A, 1 isoform 1 precurs... PCDHGA2 0.712 protocadherin gamma subfamily A, 2 isoform 2 precurs... PCDHGA2 0.711 protocadherin gamma subfamily A, 2 isoform 1 precurs... PCDHGA5 0.694 protocadherin gamma subfamily A, 5 isoform 2 precurs... PCDHGA3 0.692 protocadherin gamma subfamily A, 3 isoform 1 precurs... PCDHGA3 0.692 protocadherin gamma subfamily A, 3 isoform 2 precurs... PCDHGA5 0.691 protocadherin gamma subfamily A, 5 isoform 1 precurs... PCDHGA6 0.688 protocadherin gamma subfamily A, 6 isoform 2 precurs... PCDHGA6 0.688 protocadherin gamma subfamily A, 6 isoform 1 precurs... PCDHGA10 0.686 protocadherin gamma subfamily A, 10 isoform 1 precur... PCDHGA10 0.686 protocadherin gamma subfamily A, 10 isoform 2 precur... PCDHGA4 0.674 protocadherin gamma subfamily A, 4 isoform 2 precurs... PCDHGA12 0.674 protocadherin gamma subfamily A, 12 isoform 1 precurs... PCDHGA12 0.674 protocadherin gamma subfamily A, 12 isoform 2 precur... PCDHGA4 0.673 protocadherin gamma subfamily A, 4 isoform 1 precurs... PCDHGA11 0.670 protocadherin gamma subfamily A, 11 isoform 2 precur... PCDHGA11 0.670 protocadherin gamma subfamily A, 11 isoform 1 precur... PCDHGA7 0.670 protocadherin gamma subfamily A, 7 isoform 2 precurs... PCDHGA7 0.670 protocadherin gamma subfamily A, 7 isoform 1 precurs... PCDHGA8 0.668 protocadherin gamma subfamily A, 8 isoform 1 precurs... PCDHGA8 0.668 protocadherin gamma subfamily A, 8 isoform 2 precurso... PCDHGA9 0.644 protocadherin gamma subfamily A, 9 isoform 1 precurs... PCDHGA9 0.644 protocadherin gamma subfamily A, 9 isoform 2 precurs... PCDHGA11 0.506 protocadherin gamma subfamily A, 11 isoform 3 precur... PCDHGB5 0.418 protocadherin gamma subfamily B, 5 isoform 2 precurs... PCDHGB5 0.418 protocadherin gamma subfamily B, 5 isoform 1 precurs... PCDHGB2 0.408 protocadherin gamma subfamily B, 2 isoform 1 precurs... PCDHGB2 0.408 protocadherin gamma subfamily B, 2 isoform 2 precurs... PCDHGB3 0.401 protocadherin gamma subfamily B, 3 isoform 2 precurs... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.