PCDHAC1 4293

Name: PCDHAC1	Sequence: fasta or formatted (818aa)		NCBI GI: 14717403
Description: protocadherin alpha subfamily C, 1 isoform 2 precursor		Referenced in: Cadherins and Related Proteins
Other entries for this name: alt prot [963aa] protocadherin alpha subfamily C, 1 isoform 1 precursor
Composition: Amino acid Percentage Count Longest homopolymer A alanine 8.1 66 3 C cysteine 1.8 15 2 D aspartate 6.6 54 3 E glutamate 5.6 46 2 F phenylalanine 3.8 31 2 G glycine 7.2 59 2 H histidine 2.0 16 1 I isoleucine 3.5 29 2 K lysine 1.8 15 1 L leucine 11.9 97 3 M methionine 0.9 7 1 N asparagine 4.8 39 2 P proline 6.1 50 2 Q glutamine 3.4 28 2 R arginine 5.9 48 2 S serine 9.5 78 3 T threonine 5.0 41 2 V valine 9.3 76 5 W tryptophan 0.4 3 1 Y tyrosine 2.4 20 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 protocadherin alpha subfamily C, 1 isoform 2 precurs... PCDHAC1 0.991 protocadherin alpha subfamily C, 1 isoform 1 precurs... PCDHGA10 0.358 protocadherin gamma subfamily A, 10 isoform 1 precur... PCDHGA10 0.358 protocadherin gamma subfamily A, 10 isoform 2 precur... PCDHGA11 0.358 protocadherin gamma subfamily A, 11 isoform 2 precur... PCDHGA11 0.358 protocadherin gamma subfamily A, 11 isoform 1 precur... PCDHAC2 0.353 protocadherin alpha subfamily C, 2 isoform 1 precurso... PCDHAC2 0.353 protocadherin alpha subfamily C, 2 isoform 2 precurs... PCDHGA12 0.350 protocadherin gamma subfamily A, 12 isoform 1 precurs... PCDHGA12 0.350 protocadherin gamma subfamily A, 12 isoform 2 precur... PCDHGC4 0.348 protocadherin gamma subfamily C, 4 isoform 2 precurs... PCDHGC4 0.348 protocadherin gamma subfamily C, 4 isoform 1 precurs... PCDHGA3 0.345 protocadherin gamma subfamily A, 3 isoform 1 precurs... PCDHGA3 0.345 protocadherin gamma subfamily A, 3 isoform 2 precurs... PCDHGA4 0.344 protocadherin gamma subfamily A, 4 isoform 2 precurs... PCDHGA4 0.344 protocadherin gamma subfamily A, 4 isoform 1 precurs... PCDHGA8 0.343 protocadherin gamma subfamily A, 8 isoform 1 precurs... PCDHGA8 0.343 protocadherin gamma subfamily A, 8 isoform 2 precurso... PCDHGA9 0.343 protocadherin gamma subfamily A, 9 isoform 1 precurs... PCDHGA9 0.343 protocadherin gamma subfamily A, 9 isoform 2 precurs... PCDHGA5 0.342 protocadherin gamma subfamily A, 5 isoform 2 precurs... PCDHGA5 0.342 protocadherin gamma subfamily A, 5 isoform 1 precurs... PCDHGB7 0.340 protocadherin gamma subfamily B, 7 isoform 2 precurs... PCDHGB7 0.340 protocadherin gamma subfamily B, 7 isoform 1 precurs... PCDHGA7 0.338 protocadherin gamma subfamily A, 7 isoform 1 precurs... PCDHGA7 0.338 protocadherin gamma subfamily A, 7 isoform 2 precurs... PCDHGB1 0.338 protocadherin gamma subfamily B, 1 isoform 2 precurs... PCDHGB1 0.338 protocadherin gamma subfamily B, 1 isoform 1 precurs... PCDHGA6 0.337 protocadherin gamma subfamily A, 6 isoform 1 precurs... PCDHGA6 0.337 protocadherin gamma subfamily A, 6 isoform 2 precurs... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.