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Search of human proteins with 109633031
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|109633031 telomerase reverse transcriptase isoform 1 [Homo
sapiens]
(1132 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|109633031 telomerase reverse transcriptase isoform 1 [Homo sa... 2300 0.0
gi|38201702 telomerase reverse transcriptase isoform 2 [Homo sap... 2267 0.0
gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo sapi... 51 7e-06
gi|113416994 PREDICTED: hypothetical protein [Homo sapiens] 44 9e-04
gi|113416470 PREDICTED: hypothetical protein [Homo sapiens] 44 9e-04
gi|162138911 IQ motif and Sec7 domain 2 isoform1 [Homo sapiens] 44 9e-04
gi|187829730 BCL2 binding component 3 isoform 1 [Homo sapiens] 43 0.001
gi|169167740 PREDICTED: hypothetical protein [Homo sapiens] 42 0.003
gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 42 0.003
gi|42542379 serine/arginine repetitive matrix 1 [Homo sapiens] 41 0.007
gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 40 0.010
gi|154354974 phosphatase and actin regulator 2 isoform 3 [Homo s... 40 0.010
gi|154354968 phosphatase and actin regulator 2 isoform 1 [Homo s... 40 0.010
gi|45120115 hypothetical protein LOC56905 [Homo sapiens] 40 0.016
gi|4885237 forkhead box C2 [Homo sapiens] 39 0.021
gi|110832843 TBP-associated factor 4 [Homo sapiens] 39 0.021
gi|42544123 splicing factor 1 isoform 3 [Homo sapiens] 39 0.021
gi|42544125 splicing factor 1 isoform 2 [Homo sapiens] 39 0.021
gi|42544130 splicing factor 1 isoform 1 [Homo sapiens] 39 0.021
gi|37537692 proline-rich protein BstNI subfamily 4 precursor [Ho... 39 0.021
gi|156523246 proline-rich transmembrane protein 2 [Homo sapiens] 39 0.021
gi|239756247 PREDICTED: hypothetical protein [Homo sapiens] 39 0.028
gi|239750790 PREDICTED: hypothetical protein XP_002347558 [Homo ... 39 0.028
gi|239745150 PREDICTED: hypothetical protein XP_002343411 [Homo ... 39 0.028
gi|239745134 PREDICTED: hypothetical protein XP_002343399 [Homo ... 39 0.028
gi|239745119 PREDICTED: hypothetical protein XP_002343397 [Homo ... 39 0.028
gi|239745116 PREDICTED: hypothetical protein XP_002343387 [Homo ... 39 0.028
gi|191252816 extracellular leucine-rich repeat and fibronectin t... 39 0.036
gi|91199543 myeloid/lymphoid or mixed-lineage leukemia 5 [Homo s... 39 0.036
gi|33636768 myeloid/lymphoid or mixed-lineage leukemia 5 [Homo s... 39 0.036
>gi|109633031 telomerase reverse transcriptase isoform 1 [Homo
sapiens]
Length = 1132
Score = 2300 bits (5961), Expect = 0.0
Identities = 1132/1132 (100%), Positives = 1132/1132 (100%)
Query: 1 MPRAPRCRAVRSLLRSHYREVLPLATFVRRLGPQGWRLVQRGDPAAFRALVAQCLVCVPW 60
MPRAPRCRAVRSLLRSHYREVLPLATFVRRLGPQGWRLVQRGDPAAFRALVAQCLVCVPW
Sbjct: 1 MPRAPRCRAVRSLLRSHYREVLPLATFVRRLGPQGWRLVQRGDPAAFRALVAQCLVCVPW 60
Query: 61 DARPPPAAPSFRQVSCLKELVARVLQRLCERGAKNVLAFGFALLDGARGGPPEAFTTSVR 120
DARPPPAAPSFRQVSCLKELVARVLQRLCERGAKNVLAFGFALLDGARGGPPEAFTTSVR
Sbjct: 61 DARPPPAAPSFRQVSCLKELVARVLQRLCERGAKNVLAFGFALLDGARGGPPEAFTTSVR 120
Query: 121 SYLPNTVTDALRGSGAWGLLLRRVGDDVLVHLLARCALFVLVAPSCAYQVCGPPLYQLGA 180
SYLPNTVTDALRGSGAWGLLLRRVGDDVLVHLLARCALFVLVAPSCAYQVCGPPLYQLGA
Sbjct: 121 SYLPNTVTDALRGSGAWGLLLRRVGDDVLVHLLARCALFVLVAPSCAYQVCGPPLYQLGA 180
Query: 181 ATQARPPPHASGPRRRLGCERAWNHSVREAGVPLGLPAPGARRRGGSASRSLPLPKRPRR 240
ATQARPPPHASGPRRRLGCERAWNHSVREAGVPLGLPAPGARRRGGSASRSLPLPKRPRR
Sbjct: 181 ATQARPPPHASGPRRRLGCERAWNHSVREAGVPLGLPAPGARRRGGSASRSLPLPKRPRR 240
Query: 241 GAAPEPERTPVGQGSWAHPGRTRGPSDRGFCVVSPARPAEEATSLEGALSGTRHSHPSVG 300
GAAPEPERTPVGQGSWAHPGRTRGPSDRGFCVVSPARPAEEATSLEGALSGTRHSHPSVG
Sbjct: 241 GAAPEPERTPVGQGSWAHPGRTRGPSDRGFCVVSPARPAEEATSLEGALSGTRHSHPSVG 300
Query: 301 RQHHAGPPSTSRPPRPWDTPCPPVYAETKHFLYSSGDKEQLRPSFLLSSLRPSLTGARRL 360
RQHHAGPPSTSRPPRPWDTPCPPVYAETKHFLYSSGDKEQLRPSFLLSSLRPSLTGARRL
Sbjct: 301 RQHHAGPPSTSRPPRPWDTPCPPVYAETKHFLYSSGDKEQLRPSFLLSSLRPSLTGARRL 360
Query: 361 VETIFLGSRPWMPGTPRRLPRLPQRYWQMRPLFLELLGNHAQCPYGVLLKTHCPLRAAVT 420
VETIFLGSRPWMPGTPRRLPRLPQRYWQMRPLFLELLGNHAQCPYGVLLKTHCPLRAAVT
Sbjct: 361 VETIFLGSRPWMPGTPRRLPRLPQRYWQMRPLFLELLGNHAQCPYGVLLKTHCPLRAAVT 420
Query: 421 PAAGVCAREKPQGSVAAPEEEDTDPRRLVQLLRQHSSPWQVYGFVRACLRRLVPPGLWGS 480
PAAGVCAREKPQGSVAAPEEEDTDPRRLVQLLRQHSSPWQVYGFVRACLRRLVPPGLWGS
Sbjct: 421 PAAGVCAREKPQGSVAAPEEEDTDPRRLVQLLRQHSSPWQVYGFVRACLRRLVPPGLWGS 480
Query: 481 RHNERRFLRNTKKFISLGKHAKLSLQELTWKMSVRDCAWLRRSPGVGCVPAAEHRLREEI 540
RHNERRFLRNTKKFISLGKHAKLSLQELTWKMSVRDCAWLRRSPGVGCVPAAEHRLREEI
Sbjct: 481 RHNERRFLRNTKKFISLGKHAKLSLQELTWKMSVRDCAWLRRSPGVGCVPAAEHRLREEI 540
Query: 541 LAKFLHWLMSVYVVELLRSFFYVTETTFQKNRLFFYRKSVWSKLQSIGIRQHLKRVQLRE 600
LAKFLHWLMSVYVVELLRSFFYVTETTFQKNRLFFYRKSVWSKLQSIGIRQHLKRVQLRE
Sbjct: 541 LAKFLHWLMSVYVVELLRSFFYVTETTFQKNRLFFYRKSVWSKLQSIGIRQHLKRVQLRE 600
Query: 601 LSEAEVRQHREARPALLTSRLRFIPKPDGLRPIVNMDYVVGARTFRREKRAERLTSRVKA 660
LSEAEVRQHREARPALLTSRLRFIPKPDGLRPIVNMDYVVGARTFRREKRAERLTSRVKA
Sbjct: 601 LSEAEVRQHREARPALLTSRLRFIPKPDGLRPIVNMDYVVGARTFRREKRAERLTSRVKA 660
Query: 661 LFSVLNYERARRPGLLGASVLGLDDIHRAWRTFVLRVRAQDPPPELYFVKVDVTGAYDTI 720
LFSVLNYERARRPGLLGASVLGLDDIHRAWRTFVLRVRAQDPPPELYFVKVDVTGAYDTI
Sbjct: 661 LFSVLNYERARRPGLLGASVLGLDDIHRAWRTFVLRVRAQDPPPELYFVKVDVTGAYDTI 720
Query: 721 PQDRLTEVIASIIKPQNTYCVRRYAVVQKAAHGHVRKAFKSHVSTLTDLQPYMRQFVAHL 780
PQDRLTEVIASIIKPQNTYCVRRYAVVQKAAHGHVRKAFKSHVSTLTDLQPYMRQFVAHL
Sbjct: 721 PQDRLTEVIASIIKPQNTYCVRRYAVVQKAAHGHVRKAFKSHVSTLTDLQPYMRQFVAHL 780
Query: 781 QETSPLRDAVVIEQSSSLNEASSGLFDVFLRFMCHHAVRIRGKSYVQCQGIPQGSILSTL 840
QETSPLRDAVVIEQSSSLNEASSGLFDVFLRFMCHHAVRIRGKSYVQCQGIPQGSILSTL
Sbjct: 781 QETSPLRDAVVIEQSSSLNEASSGLFDVFLRFMCHHAVRIRGKSYVQCQGIPQGSILSTL 840
Query: 841 LCSLCYGDMENKLFAGIRRDGLLLRLVDDFLLVTPHLTHAKTFLRTLVRGVPEYGCVVNL 900
LCSLCYGDMENKLFAGIRRDGLLLRLVDDFLLVTPHLTHAKTFLRTLVRGVPEYGCVVNL
Sbjct: 841 LCSLCYGDMENKLFAGIRRDGLLLRLVDDFLLVTPHLTHAKTFLRTLVRGVPEYGCVVNL 900
Query: 901 RKTVVNFPVEDEALGGTAFVQMPAHGLFPWCGLLLDTRTLEVQSDYSSYARTSIRASLTF 960
RKTVVNFPVEDEALGGTAFVQMPAHGLFPWCGLLLDTRTLEVQSDYSSYARTSIRASLTF
Sbjct: 901 RKTVVNFPVEDEALGGTAFVQMPAHGLFPWCGLLLDTRTLEVQSDYSSYARTSIRASLTF 960
Query: 961 NRGFKAGRNMRRKLFGVLRLKCHSLFLDLQVNSLQTVCTNIYKILLLQAYRFHACVLQLP 1020
NRGFKAGRNMRRKLFGVLRLKCHSLFLDLQVNSLQTVCTNIYKILLLQAYRFHACVLQLP
Sbjct: 961 NRGFKAGRNMRRKLFGVLRLKCHSLFLDLQVNSLQTVCTNIYKILLLQAYRFHACVLQLP 1020
Query: 1021 FHQQVWKNPTFFLRVISDTASLCYSILKAKNAGMSLGAKGAAGPLPSEAVQWLCHQAFLL 1080
FHQQVWKNPTFFLRVISDTASLCYSILKAKNAGMSLGAKGAAGPLPSEAVQWLCHQAFLL
Sbjct: 1021 FHQQVWKNPTFFLRVISDTASLCYSILKAKNAGMSLGAKGAAGPLPSEAVQWLCHQAFLL 1080
Query: 1081 KLTRHRVTYVPLLGSLRTAQTQLSRKLPGTTLTALEAAANPALPSDFKTILD 1132
KLTRHRVTYVPLLGSLRTAQTQLSRKLPGTTLTALEAAANPALPSDFKTILD
Sbjct: 1081 KLTRHRVTYVPLLGSLRTAQTQLSRKLPGTTLTALEAAANPALPSDFKTILD 1132
>gi|38201702 telomerase reverse transcriptase isoform 2 [Homo sapiens]
Length = 1120
Score = 2267 bits (5875), Expect = 0.0
Identities = 1120/1132 (98%), Positives = 1120/1132 (98%), Gaps = 12/1132 (1%)
Query: 1 MPRAPRCRAVRSLLRSHYREVLPLATFVRRLGPQGWRLVQRGDPAAFRALVAQCLVCVPW 60
MPRAPRCRAVRSLLRSHYREVLPLATFVRRLGPQGWRLVQRGDPAAFRALVAQCLVCVPW
Sbjct: 1 MPRAPRCRAVRSLLRSHYREVLPLATFVRRLGPQGWRLVQRGDPAAFRALVAQCLVCVPW 60
Query: 61 DARPPPAAPSFRQVSCLKELVARVLQRLCERGAKNVLAFGFALLDGARGGPPEAFTTSVR 120
DARPPPAAPSFRQVSCLKELVARVLQRLCERGAKNVLAFGFALLDGARGGPPEAFTTSVR
Sbjct: 61 DARPPPAAPSFRQVSCLKELVARVLQRLCERGAKNVLAFGFALLDGARGGPPEAFTTSVR 120
Query: 121 SYLPNTVTDALRGSGAWGLLLRRVGDDVLVHLLARCALFVLVAPSCAYQVCGPPLYQLGA 180
SYLPNTVTDALRGSGAWGLLLRRVGDDVLVHLLARCALFVLVAPSCAYQVCGPPLYQLGA
Sbjct: 121 SYLPNTVTDALRGSGAWGLLLRRVGDDVLVHLLARCALFVLVAPSCAYQVCGPPLYQLGA 180
Query: 181 ATQARPPPHASGPRRRLGCERAWNHSVREAGVPLGLPAPGARRRGGSASRSLPLPKRPRR 240
ATQARPPPHASGPRRRLGCERAWNHSVREAGVPLGLPAPGARRRGGSASRSLPLPKRPRR
Sbjct: 181 ATQARPPPHASGPRRRLGCERAWNHSVREAGVPLGLPAPGARRRGGSASRSLPLPKRPRR 240
Query: 241 GAAPEPERTPVGQGSWAHPGRTRGPSDRGFCVVSPARPAEEATSLEGALSGTRHSHPSVG 300
GAAPEPERTPVGQGSWAHPGRTRGPSDRGFCVVSPARPAEEATSLEGALSGTRHSHPSVG
Sbjct: 241 GAAPEPERTPVGQGSWAHPGRTRGPSDRGFCVVSPARPAEEATSLEGALSGTRHSHPSVG 300
Query: 301 RQHHAGPPSTSRPPRPWDTPCPPVYAETKHFLYSSGDKEQLRPSFLLSSLRPSLTGARRL 360
RQHHAGPPSTSRPPRPWDTPCPPVYAETKHFLYSSGDKEQLRPSFLLSSLRPSLTGARRL
Sbjct: 301 RQHHAGPPSTSRPPRPWDTPCPPVYAETKHFLYSSGDKEQLRPSFLLSSLRPSLTGARRL 360
Query: 361 VETIFLGSRPWMPGTPRRLPRLPQRYWQMRPLFLELLGNHAQCPYGVLLKTHCPLRAAVT 420
VETIFLGSRPWMPGTPRRLPRLPQRYWQMRPLFLELLGNHAQCPYGVLLKTHCPLRAAVT
Sbjct: 361 VETIFLGSRPWMPGTPRRLPRLPQRYWQMRPLFLELLGNHAQCPYGVLLKTHCPLRAAVT 420
Query: 421 PAAGVCAREKPQGSVAAPEEEDTDPRRLVQLLRQHSSPWQVYGFVRACLRRLVPPGLWGS 480
PAAGVCAREKPQGSVAAPEEEDTDPRRLVQLLRQHSSPWQVYGFVRACLRRLVPPGLWGS
Sbjct: 421 PAAGVCAREKPQGSVAAPEEEDTDPRRLVQLLRQHSSPWQVYGFVRACLRRLVPPGLWGS 480
Query: 481 RHNERRFLRNTKKFISLGKHAKLSLQELTWKMSVRDCAWLRRSPGVGCVPAAEHRLREEI 540
RHNERRFLRNTKKFISLGKHAKLSLQELTWKMSVRDCAWLRRSPGVGCVPAAEHRLREEI
Sbjct: 481 RHNERRFLRNTKKFISLGKHAKLSLQELTWKMSVRDCAWLRRSPGVGCVPAAEHRLREEI 540
Query: 541 LAKFLHWLMSVYVVELLRSFFYVTETTFQKNRLFFYRKSVWSKLQSIGIRQHLKRVQLRE 600
LAKFLHWLMSVYVVELLRSFFYVTETTFQKNRLFFYRKSVWSKLQSIGIRQHLKRVQLRE
Sbjct: 541 LAKFLHWLMSVYVVELLRSFFYVTETTFQKNRLFFYRKSVWSKLQSIGIRQHLKRVQLRE 600
Query: 601 LSEAEVRQHREARPALLTSRLRFIPKPDGLRPIVNMDYVVGARTFRREKRAERLTSRVKA 660
LSEAEVRQHREARPALLTSRLRFIPKPDGLRPIVNMDYVVGARTFRREKRAERLTSRVKA
Sbjct: 601 LSEAEVRQHREARPALLTSRLRFIPKPDGLRPIVNMDYVVGARTFRREKRAERLTSRVKA 660
Query: 661 LFSVLNYERARRPGLLGASVLGLDDIHRAWRTFVLRVRAQDPPPELYFVKVDVTGAYDTI 720
LFSVLNYERARRPGLLGASVLGLDDIHRAWRTFVLRVRAQDPPPELYFVK
Sbjct: 661 LFSVLNYERARRPGLLGASVLGLDDIHRAWRTFVLRVRAQDPPPELYFVK---------- 710
Query: 721 PQDRLTEVIASIIKPQNTYCVRRYAVVQKAAHGHVRKAFKSHVSTLTDLQPYMRQFVAHL 780
DRLTEVIASIIKPQNTYCVRRYAVVQKAAHGHVRKAFKSHVSTLTDLQPYMRQFVAHL
Sbjct: 711 --DRLTEVIASIIKPQNTYCVRRYAVVQKAAHGHVRKAFKSHVSTLTDLQPYMRQFVAHL 768
Query: 781 QETSPLRDAVVIEQSSSLNEASSGLFDVFLRFMCHHAVRIRGKSYVQCQGIPQGSILSTL 840
QETSPLRDAVVIEQSSSLNEASSGLFDVFLRFMCHHAVRIRGKSYVQCQGIPQGSILSTL
Sbjct: 769 QETSPLRDAVVIEQSSSLNEASSGLFDVFLRFMCHHAVRIRGKSYVQCQGIPQGSILSTL 828
Query: 841 LCSLCYGDMENKLFAGIRRDGLLLRLVDDFLLVTPHLTHAKTFLRTLVRGVPEYGCVVNL 900
LCSLCYGDMENKLFAGIRRDGLLLRLVDDFLLVTPHLTHAKTFLRTLVRGVPEYGCVVNL
Sbjct: 829 LCSLCYGDMENKLFAGIRRDGLLLRLVDDFLLVTPHLTHAKTFLRTLVRGVPEYGCVVNL 888
Query: 901 RKTVVNFPVEDEALGGTAFVQMPAHGLFPWCGLLLDTRTLEVQSDYSSYARTSIRASLTF 960
RKTVVNFPVEDEALGGTAFVQMPAHGLFPWCGLLLDTRTLEVQSDYSSYARTSIRASLTF
Sbjct: 889 RKTVVNFPVEDEALGGTAFVQMPAHGLFPWCGLLLDTRTLEVQSDYSSYARTSIRASLTF 948
Query: 961 NRGFKAGRNMRRKLFGVLRLKCHSLFLDLQVNSLQTVCTNIYKILLLQAYRFHACVLQLP 1020
NRGFKAGRNMRRKLFGVLRLKCHSLFLDLQVNSLQTVCTNIYKILLLQAYRFHACVLQLP
Sbjct: 949 NRGFKAGRNMRRKLFGVLRLKCHSLFLDLQVNSLQTVCTNIYKILLLQAYRFHACVLQLP 1008
Query: 1021 FHQQVWKNPTFFLRVISDTASLCYSILKAKNAGMSLGAKGAAGPLPSEAVQWLCHQAFLL 1080
FHQQVWKNPTFFLRVISDTASLCYSILKAKNAGMSLGAKGAAGPLPSEAVQWLCHQAFLL
Sbjct: 1009 FHQQVWKNPTFFLRVISDTASLCYSILKAKNAGMSLGAKGAAGPLPSEAVQWLCHQAFLL 1068
Query: 1081 KLTRHRVTYVPLLGSLRTAQTQLSRKLPGTTLTALEAAANPALPSDFKTILD 1132
KLTRHRVTYVPLLGSLRTAQTQLSRKLPGTTLTALEAAANPALPSDFKTILD
Sbjct: 1069 KLTRHRVTYVPLLGSLRTAQTQLSRKLPGTTLTALEAAANPALPSDFKTILD 1120
>gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo
sapiens]
Length = 816
Score = 50.8 bits (120), Expect = 7e-06
Identities = 61/213 (28%), Positives = 80/213 (37%), Gaps = 26/213 (12%)
Query: 181 ATQARPPPHASGPRRRLGCERAWNHSVREAGVPLGLPAPGARRR---GGSASRSLPLPKR 237
A ARP P GPR+ + A HS E P+P ARRR GG R P +
Sbjct: 184 APSARPRPPTEGPRKSVSS--ASEHSTTE-------PSPAARRRPSAGGGLQR--PASRS 232
Query: 238 PRRGAAP--EPERT-PVGQGSWAHPGRTRGPSDRGFCVVSPAR---PAEEATSLEGALSG 291
A P P R+ P +G+ P P +G + P + P ++A G LS
Sbjct: 233 LSSSATPLSSPARSGPSARGTPRAPAHPSQPKPKGLQALRPPQVTPPRKDAAPALGPLSS 292
Query: 292 TRHSHPSVGRQHHAGPPSTSRPPRPWDTPCPPVYAETKHFLYSSGDKEQLRPSFLLS-SL 350
+ + PS + PPS S PP P PP ++ Q SFL S L
Sbjct: 293 SPLATPSP-----SAPPSPSAPPSLQTLPSPPATPPSQATTSLGSPTLQATHSFLPSPPL 347
Query: 351 RPSLTGARRLVETIFLGSRPWMPGTPRRLPRLP 383
P T + + L P P P P
Sbjct: 348 SPLATPPPQAPPALALPPLQAPPSPPASPPLSP 380
Score = 33.9 bits (76), Expect = 0.90
Identities = 63/244 (25%), Positives = 84/244 (34%), Gaps = 40/244 (16%)
Query: 186 PPPHASGPRRRLGCERAWNHS--VREAGVPLGLPAPGARRRGGSASRSLPLPKRPRRGAA 243
PPP R LG A AG G P + R G S P P R A
Sbjct: 36 PPPVTPAALRVLGAAGAVGRKPLAERAGGIGGATIPESAPRAGPTRTSRP-PASGRGERA 94
Query: 244 PEPERTPVGQGSWAHPGRTRGPSD------------------RGFCVVSPARPAEEATS- 284
P + T G S PGR G + RG +P R A A +
Sbjct: 95 PPAKNTSPGPVS--SPGRASGTTRPGPLGQKGLRISAEETVARGKATEAPKRSALSAGAR 152
Query: 285 --LEGALSGTRHSHPSVGRQHHAG--------PPSTSRPPRPWDTPCPPVYAETKHFLYS 334
G GT P++ R+ A P ++RP P + P V + ++H
Sbjct: 153 RDTSGPTPGT--PSPAMARRSRAAGTEVGLPRPAPSARPRPPTEGPRKSVSSASEHSTTE 210
Query: 335 SGDKEQLRPSFLLSSLRPSLTGARRLVETIFLGSRPWMPG-TPRRLPRLPQRYWQMRPLF 393
+ RPS RP+ +R L + S P G + R PR P Q +P
Sbjct: 211 PSPAARRRPSAGGGLQRPA---SRSLSSSATPLSSPARSGPSARGTPRAPAHPSQPKPKG 267
Query: 394 LELL 397
L+ L
Sbjct: 268 LQAL 271
Score = 31.6 bits (70), Expect = 4.5
Identities = 42/158 (26%), Positives = 51/158 (32%), Gaps = 18/158 (11%)
Query: 170 VCGPPLYQLGAATQARPPPHASGPRRRLGCERAWNHSVREAGVPLGLPAPGARRRGGSAS 229
V GP L A PPP + P L HS P L + GG+A+
Sbjct: 559 VSGPRLTL--ALAPGPPPPPSRSPSSTLSGPDLAGHSSSATSTPEELRGYDSGPEGGAAA 616
Query: 230 RSLP-------LPKRPRRGAAPEPERTPVGQGSWAHPGRTRGPSDRGFCVVSPARPAEEA 282
P P RG AP P T S G C + E A
Sbjct: 617 SPPPDAELAACHPAAWSRGPAPPLAFRGAPGAPLPWPPATGPGSADGLCTIYETEGPESA 676
Query: 283 TSLEGALS-----GTRHSHPSVGRQHHAGPPSTSRPPR 315
T GAL GT + G AG ++SR P+
Sbjct: 677 TPAPGALDPGPSPGTSGGKAAAG----AGAGASSRSPK 710
>gi|113416994 PREDICTED: hypothetical protein [Homo sapiens]
Length = 302
Score = 43.9 bits (102), Expect = 9e-04
Identities = 58/189 (30%), Positives = 71/189 (37%), Gaps = 40/189 (21%)
Query: 186 PPPHASG-PRRRLGCERAWNHSVREAGVPLGLPA------PGARRRGGSASRSLPLPKRP 238
PP HA PR R+ +AW S A P GLPA PG R RG P
Sbjct: 123 PPRHAPRFPRPRMRFPQAWKAS--RAKEPRGLPAQRPTWGPGTRSRGP-----------P 169
Query: 239 RRGAAPEPERTPVGQGSWAHPGRTRGPSDRGFCVVSPARPAEEATSLEGALSGTRHSHPS 298
RR + PER+P +G H R P+ P RP S G S R +H
Sbjct: 170 RRARSQHPERSPEPEGRGNH---ARKPAALPVPGRFPIRPVLGGRSGPGDRS-LRSAHLG 225
Query: 299 VGRQHHAGPPSTSRPPRPWDTPCPPVYAETKHFLYSSGDKEQLRPSFL--------LSSL 350
Q G P T+RPP P P K + G L P + ++
Sbjct: 226 GAGQ---GRPWTARPP-----PIPHTRPRPKCACSAPGTNRNLGPRVAGANHSASGVWAV 277
Query: 351 RPSLTGARR 359
P +T ARR
Sbjct: 278 SPRVTRARR 286
>gi|113416470 PREDICTED: hypothetical protein [Homo sapiens]
Length = 302
Score = 43.9 bits (102), Expect = 9e-04
Identities = 58/189 (30%), Positives = 71/189 (37%), Gaps = 40/189 (21%)
Query: 186 PPPHASG-PRRRLGCERAWNHSVREAGVPLGLPA------PGARRRGGSASRSLPLPKRP 238
PP HA PR R+ +AW S A P GLPA PG R RG P
Sbjct: 123 PPRHAPRFPRPRMRFPQAWKAS--RAKEPRGLPAQRPTWGPGTRSRGP-----------P 169
Query: 239 RRGAAPEPERTPVGQGSWAHPGRTRGPSDRGFCVVSPARPAEEATSLEGALSGTRHSHPS 298
RR + PER+P +G H R P+ P RP S G S R +H
Sbjct: 170 RRARSQHPERSPEPEGRGNH---ARKPAALPVPGRFPIRPVLGGRSGPGDRS-LRSAHLG 225
Query: 299 VGRQHHAGPPSTSRPPRPWDTPCPPVYAETKHFLYSSGDKEQLRPSFL--------LSSL 350
Q G P T+RPP P P K + G L P + ++
Sbjct: 226 GAGQ---GRPWTARPP-----PIPHTRPRPKCACSTPGTNRNLGPRVAGANHSASGVWAV 277
Query: 351 RPSLTGARR 359
P +T ARR
Sbjct: 278 SPRVTRARR 286
>gi|162138911 IQ motif and Sec7 domain 2 isoform1 [Homo sapiens]
Length = 1488
Score = 43.9 bits (102), Expect = 9e-04
Identities = 53/169 (31%), Positives = 64/169 (37%), Gaps = 28/169 (16%)
Query: 173 PPLYQLGAATQARPPPHASGPRRRLGCERAWNHSVREAGVP------LGLPAPGARRRGG 226
PPL QLG+ PPP AS P +G R H VP LG P RR G
Sbjct: 1298 PPLPQLGSI----PPPPASAPP--VGPHR---HFHAHGPVPGPQHYTLGRPGRAPRRGAG 1348
Query: 227 SASRSLPLPKRP-RRGAAPEPERTPVGQGSWAHPGRTRGPSDRGFCVVSPARPAEEATSL 285
+ P + P + +P P +P Q AH +GP F PA A
Sbjct: 1349 GHPQFAPHGRHPLHQPTSPLPLYSPAPQHPPAHK---QGPKHFIFSHHPQMMPAAGAAGG 1405
Query: 286 EGALS-GTRHSHPSVGRQHHAGPPSTSR---PPRPWDTPCPPVYAETKH 330
G+ G +SHP HH P + PP P P PP T H
Sbjct: 1406 PGSRPPGGSYSHP-----HHPQSPLSPHSPIPPHPSYPPLPPPSPHTPH 1449
Score = 35.0 bits (79), Expect = 0.40
Identities = 46/159 (28%), Positives = 59/159 (37%), Gaps = 27/159 (16%)
Query: 170 VCGPPLYQLGAATQARPPPHASGPRRRLGCERAW----NHSVREAGVPLGLPAPG----- 220
V GP Y LG +A PRR G + H + + PL L +P
Sbjct: 1328 VPGPQHYTLGRPGRA--------PRRGAGGHPQFAPHGRHPLHQPTSPLPLYSPAPQHPP 1379
Query: 221 ARRRGGSASRSLPLPKR-PRRGAAPEPERTPVGQGSWAHPGRTRGPSDRGFCVVSPARPA 279
A ++G P+ P GAA P P G GS++HP + P SP P
Sbjct: 1380 AHKQGPKHFIFSHHPQMMPAAGAAGGPGSRPPG-GSYSHPHHPQSPLSPH----SPIPPH 1434
Query: 280 EEATSLEGALSGTRHSH----PSVGRQHHAGPPSTSRPP 314
L T HS G H +GPP T+ PP
Sbjct: 1435 PSYPPLPPPSPHTPHSPLPPTSPHGPLHASGPPGTANPP 1473
>gi|187829730 BCL2 binding component 3 isoform 1 [Homo sapiens]
Length = 261
Score = 43.1 bits (100), Expect = 0.001
Identities = 51/162 (31%), Positives = 58/162 (35%), Gaps = 20/162 (12%)
Query: 172 GPPLYQLGAATQARPP-PHASGPRRRLGCERAWNHSVREAGVPL--GLPAPGARRRGGSA 228
G L L A RP PH + L R R G PL G P P R G +
Sbjct: 68 GSVLRPLRARPGCRPRRPHPAARCLPLRPHRPTRRHRRPGGFPLAWGSPQPAPRPAPGRS 127
Query: 229 SRSLPLPKRPRRGAAPEPERT--PVGQGSWAHPGR--------TRGPSDRGFCVVSPARP 278
S +L L GAAP R P G G +HPG T GP DRG RP
Sbjct: 128 S-ALALAG----GAAPGVARAQRPGGSGGRSHPGGPGSPRGGGTVGPGDRGPAAADGGRP 182
Query: 279 AE--EATSLEGALSGTRHSHPSVGRQHHAGPPSTSRPPRPWD 318
A GA + + + HH P T P P D
Sbjct: 183 QRTVRAAETRGAAAAPPLTLEGPVQSHHGTPALTQGPQSPRD 224
Score = 30.8 bits (68), Expect = 7.6
Identities = 44/143 (30%), Positives = 48/143 (33%), Gaps = 36/143 (25%)
Query: 180 AATQARPPPHASGPRRRLGCERAWNHSVREAGVPLGLPAPGARRRGGSASRSLPLPKRPR 239
AA+ P GPR R H R G L PGARR G R PLP RP
Sbjct: 18 AASTTWVPCQICGPRER--------HGPRTPGGQL----PGARR-GPGPRRPAPLPARP- 63
Query: 240 RGAAPEPERTPVGQGSWAHPGRTRGPSDRGFCVVSPARPAEEATSLEGALSGTRHSHPSV 299
P GS P R R P R P RP A L R P+
Sbjct: 64 ----------PGALGSVLRPLRAR-PGCR------PRRPHPAARCLP-----LRPHRPTR 101
Query: 300 GRQHHAGPPSTSRPPRPWDTPCP 322
+ G P P+P P P
Sbjct: 102 RHRRPGGFPLAWGSPQPAPRPAP 124
>gi|169167740 PREDICTED: hypothetical protein [Homo sapiens]
Length = 302
Score = 42.4 bits (98), Expect = 0.003
Identities = 57/189 (30%), Positives = 71/189 (37%), Gaps = 40/189 (21%)
Query: 186 PPPHASG-PRRRLGCERAWNHSVREAGVPLGLPA------PGARRRGGSASRSLPLPKRP 238
PP HA PR R+ +AW S A P GLPA PG R RG P
Sbjct: 123 PPRHAPRFPRPRMRFPQAWKAS--RAKEPRGLPAQRPTWGPGTRSRGP-----------P 169
Query: 239 RRGAAPEPERTPVGQGSWAHPGRTRGPSDRGFCVVSPARPAEEATSLEGALSGTRHSHPS 298
R+ + PER+P +G H R P+ P RP S G S R +H
Sbjct: 170 RQARSQHPERSPEPEGRGNH---ARKPAALPVPGRFPIRPVLGGRSGPGDRS-LRSAHLG 225
Query: 299 VGRQHHAGPPSTSRPPRPWDTPCPPVYAETKHFLYSSGDKEQLRPSFL--------LSSL 350
Q G P T+RPP P P K + G L P + ++
Sbjct: 226 GAGQ---GRPWTARPP-----PIPHTRPRPKCACSAPGTNRNLGPRVAGANHSASGVWAV 277
Query: 351 RPSLTGARR 359
P +T ARR
Sbjct: 278 SPRVTRARR 286
>gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 855
Score = 42.0 bits (97), Expect = 0.003
Identities = 63/238 (26%), Positives = 81/238 (34%), Gaps = 46/238 (19%)
Query: 181 ATQARPPPHASGPRRRLGCERAWNHSVREAGVPLGLPAPGARRR---GGSASRSLPLPKR 237
A ARP P GPR+ + A HS E P+P ARRR GG R P +
Sbjct: 193 APSARPRPPTEGPRKSVSS--ASEHSTTE-------PSPAARRRPSAGGGLQR--PASRS 241
Query: 238 PRRGAAP--EPERT-PVGQGSWAHPGRTRGPSDRGFCVVSPAR---PAEEATSLEGALSG 291
A P P R+ P +G+ P P +G + P + P ++A G LS
Sbjct: 242 LSSSATPLSSPARSGPSARGTPRAPAHPSQPKPKGLQALRPPQVTPPRKDAAPALGPLSS 301
Query: 292 TRHS--HPSVGRQHHA-----------------------GPPSTSRPPRPWDTPCPPVYA 326
+ + PS Q A PPS S PP P PP
Sbjct: 302 SPLATPSPSAALQSQAPPTLPATPHSSSLTCQLATPLPLAPPSPSAPPSLQTLPSPPATP 361
Query: 327 ETKHFLYSSGDKEQLRPSFLLS-SLRPSLTGARRLVETIFLGSRPWMPGTPRRLPRLP 383
++ Q SFL S L P T + + L P P P P
Sbjct: 362 PSQATTSLGSPTLQATHSFLPSPPLSPLATPPPQAPPALALPPLQAPPSPPASPPLSP 419
Score = 36.6 bits (83), Expect = 0.14
Identities = 61/251 (24%), Positives = 87/251 (34%), Gaps = 45/251 (17%)
Query: 186 PPPHASGPRRRLGCERAWNHS--------VREAGVPLGLPAPGARRRGGSASRSLPLPKR 237
PPP R LG A + A +P P G R G++SR+ P +
Sbjct: 36 PPPVTPAALRVLGAAGAVGRKPLAERAGGIGGATIPESAPRAGPTRSAGTSSRN-PASRP 94
Query: 238 PRRGAAPE-PERTPVGQGSWAHPGRTRGPSD------------------RGFCVVSPARP 278
P G P G + PGR G + RG +P R
Sbjct: 95 PASGRGERAPPAKNTSPGPVSSPGRASGTTRPGPLGQKGLRISAEETVARGKATEAPKRS 154
Query: 279 AEEATS---LEGALSGTRHSHPSVGRQHHAG--------PPSTSRPPRPWDTPCPPVYAE 327
A A + G GT P++ R+ A P ++RP P + P V +
Sbjct: 155 ALSAGARRDTSGPTPGT--PSPAMARRSRAAGTEVGLPRPAPSARPRPPTEGPRKSVSSA 212
Query: 328 TKHFLYSSGDKEQLRPSFLLSSLRPSLTGARRLVETIFLGSRPWMPG-TPRRLPRLPQRY 386
++H + RPS RP+ +R L + S P G + R PR P
Sbjct: 213 SEHSTTEPSPAARRRPSAGGGLQRPA---SRSLSSSATPLSSPARSGPSARGTPRAPAHP 269
Query: 387 WQMRPLFLELL 397
Q +P L+ L
Sbjct: 270 SQPKPKGLQAL 280
Score = 31.6 bits (70), Expect = 4.5
Identities = 42/158 (26%), Positives = 51/158 (32%), Gaps = 18/158 (11%)
Query: 170 VCGPPLYQLGAATQARPPPHASGPRRRLGCERAWNHSVREAGVPLGLPAPGARRRGGSAS 229
V GP L A PPP + P L HS P L + GG+A+
Sbjct: 598 VSGPRLTL--ALAPGPPPPPSRSPSSTLSGPDLAGHSSSATSTPEELRGYDSGPEGGAAA 655
Query: 230 RSLP-------LPKRPRRGAAPEPERTPVGQGSWAHPGRTRGPSDRGFCVVSPARPAEEA 282
P P RG AP P T S G C + E A
Sbjct: 656 SPPPDAELAACHPAAWSRGPAPPLAFRGAPGAPLPWPPATGPGSADGLCTIYETEGPESA 715
Query: 283 TSLEGALS-----GTRHSHPSVGRQHHAGPPSTSRPPR 315
T GAL GT + G AG ++SR P+
Sbjct: 716 TPAPGALDPGPSPGTSGGKAAAG----AGAGASSRSPK 749
>gi|42542379 serine/arginine repetitive matrix 1 [Homo sapiens]
Length = 904
Score = 40.8 bits (94), Expect = 0.007
Identities = 44/148 (29%), Positives = 63/148 (42%), Gaps = 25/148 (16%)
Query: 182 TQARPPPHASGPRRRLGCERAWNHSVREAGVPLGLPAPGARRRGGSASRSLPLPKRPRRG 241
T++R P H PRRR R+ ++S R P P+P RRR + R +P P R RR
Sbjct: 288 TRSRSPSHTR-PRRRHR-SRSRSYSPRRRPSPRRRPSP--RRR--TPPRRMPPPPRHRRS 341
Query: 242 AAPEPER-----TPVGQGSWAHPGRTRGPSDRGFCVVSPARPAEEATSLEGALSGTRHSH 296
+P R + G S + R+R P P +P + +S TR
Sbjct: 342 RSPVRRRRRSSASLSGSSSSSSSSRSRSP---------PKKPPKRTSSPPRK---TRRLS 389
Query: 297 PSVG--RQHHAGPPSTSRPPRPWDTPCP 322
PS R+ H P + PP+ +P P
Sbjct: 390 PSASPPRRRHRPSPPATPPPKTRHSPTP 417
Score = 31.2 bits (69), Expect = 5.8
Identities = 34/114 (29%), Positives = 42/114 (36%), Gaps = 20/114 (17%)
Query: 222 RRRGGSASRSLPLPKRPRRGAAPEPERTPVGQGSWAHPGRTRGPSDRGFCVVSPARPAEE 281
RRR S SRS +RP P P R P R P R SP R
Sbjct: 299 RRRHRSRSRSYSPRRRPSPRRRPSPRRRT--------PPRRMPPPPRHRRSRSPVRRRRR 350
Query: 282 AT-SLEGALSGTRHSH----PSVGRQHHAGPPSTSR-------PPRPWDTPCPP 323
++ SL G+ S + S P + + PP +R PPR P PP
Sbjct: 351 SSASLSGSSSSSSSSRSRSPPKKPPKRTSSPPRKTRRLSPSASPPRRRHRPSPP 404
Score = 31.2 bits (69), Expect = 5.8
Identities = 45/183 (24%), Positives = 64/183 (34%), Gaps = 36/183 (19%)
Query: 217 PAPGARRRGGSAS---RSLPLPKRPRRGAAPEPERTPVGQGSWAHPGRTRGPSDRGFCVV 273
P+P R++ S R P P RR +P P P + + P R R PS
Sbjct: 531 PSPRKRQKETSPRGRRRRSPSPPPTRRRRSPSPAPPPRRRRTPTPPPRRRTPSP------ 584
Query: 274 SPARPAEEATSLEGALSGTRHSHPSVGRQHHAGPPSTSR------PPRPWDTPCPPVYAE 327
P R + R P + R++ PP R PP+ +P PP
Sbjct: 585 PPRRRS----------PSPRRYSPPIQRRYSPSPPPKRRTASPPPPPKRRASPSPPPKRR 634
Query: 328 TKHFLYSSGDKEQLRPSFLLSSLRPSLTGARRLVETIFLGSR------PWMPGTPRRLPR 381
H S K++ P + PSL+ R + +R P +P PR
Sbjct: 635 VSH---SPPPKQRSSP--VTKRRSPSLSSKHRKGSSPSRSTREARSPQPNKRHSPSPRPR 689
Query: 382 LPQ 384
PQ
Sbjct: 690 APQ 692
>gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 1124
Score = 40.4 bits (93), Expect = 0.010
Identities = 51/178 (28%), Positives = 61/178 (34%), Gaps = 44/178 (24%)
Query: 181 ATQARPPPHASGPRRRLGCERAWNHSVREAGVPLGLPAPGARRR---GGS----ASRSL- 232
A ARP P GPR+ + A HS E P+P ARRR GG ASRSL
Sbjct: 193 APSARPRPPTEGPRKSVSS--ASEHSTTE-------PSPAARRRPSAGGGLQRPASRSLS 243
Query: 233 ----PL-------------PKRPRRGAAPEPERTPVGQGSWAHPGRTRGPSDRGFCVVSP 275
PL P+ P + P+P+ + P R G SP
Sbjct: 244 SSATPLSSPARSGPSARGTPRAPAHPSQPKPKGLQALRPPQVTPPRKDAAPALGPLSSSP 303
Query: 276 ----------ARPAEEATSLEGALSGTRHSHPSVGRQHHAGPPSTSRPPRPWDTPCPP 323
ARP + L T P + PPS S PP P PP
Sbjct: 304 LATPSPSGTKARPVPPPDNAATPLPATLPPSPPLATPLPLAPPSPSAPPSLQTLPSPP 361
Score = 36.6 bits (83), Expect = 0.14
Identities = 61/251 (24%), Positives = 87/251 (34%), Gaps = 45/251 (17%)
Query: 186 PPPHASGPRRRLGCERAWNHS--------VREAGVPLGLPAPGARRRGGSASRSLPLPKR 237
PPP R LG A + A +P P G R G++SR+ P +
Sbjct: 36 PPPVTPAALRVLGAAGAVGRKPLAERAGGIGGATIPESAPRAGPTRSAGTSSRN-PASRP 94
Query: 238 PRRGAAPE-PERTPVGQGSWAHPGRTRGPSD------------------RGFCVVSPARP 278
P G P G + PGR G + RG +P R
Sbjct: 95 PASGRGERAPPAKNTSPGPVSSPGRASGTTRPGPLGQKGLRISAEETVARGKATEAPKRS 154
Query: 279 AEEATS---LEGALSGTRHSHPSVGRQHHAG--------PPSTSRPPRPWDTPCPPVYAE 327
A A + G GT P++ R+ A P ++RP P + P V +
Sbjct: 155 ALSAGARRDTSGPTPGT--PSPAMARRSRAAGTEVGLPRPAPSARPRPPTEGPRKSVSSA 212
Query: 328 TKHFLYSSGDKEQLRPSFLLSSLRPSLTGARRLVETIFLGSRPWMPG-TPRRLPRLPQRY 386
++H + RPS RP+ +R L + S P G + R PR P
Sbjct: 213 SEHSTTEPSPAARRRPSAGGGLQRPA---SRSLSSSATPLSSPARSGPSARGTPRAPAHP 269
Query: 387 WQMRPLFLELL 397
Q +P L+ L
Sbjct: 270 SQPKPKGLQAL 280
Score = 31.6 bits (70), Expect = 4.5
Identities = 42/158 (26%), Positives = 51/158 (32%), Gaps = 18/158 (11%)
Query: 170 VCGPPLYQLGAATQARPPPHASGPRRRLGCERAWNHSVREAGVPLGLPAPGARRRGGSAS 229
V GP L A PPP + P L HS P L + GG+A+
Sbjct: 867 VSGPRLTL--ALAPGPPPPPSRSPSSTLSGPDLAGHSSSATSTPEELRGYDSGPEGGAAA 924
Query: 230 RSLP-------LPKRPRRGAAPEPERTPVGQGSWAHPGRTRGPSDRGFCVVSPARPAEEA 282
P P RG AP P T S G C + E A
Sbjct: 925 SPPPDAELAACHPAAWSRGPAPPLAFRGAPGAPLPWPPATGPGSADGLCTIYETEGPESA 984
Query: 283 TSLEGALS-----GTRHSHPSVGRQHHAGPPSTSRPPR 315
T GAL GT + G AG ++SR P+
Sbjct: 985 TPAPGALDPGPSPGTSGGKAAAG----AGAGASSRSPK 1018
>gi|154354974 phosphatase and actin regulator 2 isoform 3 [Homo
sapiens]
Length = 634
Score = 40.4 bits (93), Expect = 0.010
Identities = 36/138 (26%), Positives = 55/138 (39%), Gaps = 13/138 (9%)
Query: 179 GAATQARPPPHASGPRRRLGCERAWNHSVREAGVPLGLPAPGARRRGGSASRSLPLPKRP 238
G+ ++ PP ++ E NHS A L AP R +S PK
Sbjct: 123 GSVSEKTPPLEEQAEDKK---ENTENHSETPAAPALPPSAPPKPRPKPKPKKSPVPPKGA 179
Query: 239 RRGAAPEPERTPVGQGSWAHPGRTRGPSDRGFCVVSPARPAEEATSLEGALSGTRHSHPS 298
GA+ + + P + + PG+ V P +PA T+ E A G+ HS +
Sbjct: 180 TAGASHKGDEVPPIKKNTKAPGKQ--------APVPPPKPASRNTTREAA--GSSHSKKT 229
Query: 299 VGRQHHAGPPSTSRPPRP 316
G + A P ++S RP
Sbjct: 230 TGSKASASPSTSSTSSRP 247
>gi|154354968 phosphatase and actin regulator 2 isoform 1 [Homo
sapiens]
Length = 645
Score = 40.4 bits (93), Expect = 0.010
Identities = 36/138 (26%), Positives = 55/138 (39%), Gaps = 13/138 (9%)
Query: 179 GAATQARPPPHASGPRRRLGCERAWNHSVREAGVPLGLPAPGARRRGGSASRSLPLPKRP 238
G+ ++ PP ++ E NHS A L AP R +S PK
Sbjct: 134 GSVSEKTPPLEEQAEDKK---ENTENHSETPAAPALPPSAPPKPRPKPKPKKSPVPPKGA 190
Query: 239 RRGAAPEPERTPVGQGSWAHPGRTRGPSDRGFCVVSPARPAEEATSLEGALSGTRHSHPS 298
GA+ + + P + + PG+ V P +PA T+ E A G+ HS +
Sbjct: 191 TAGASHKGDEVPPIKKNTKAPGKQ--------APVPPPKPASRNTTREAA--GSSHSKKT 240
Query: 299 VGRQHHAGPPSTSRPPRP 316
G + A P ++S RP
Sbjct: 241 TGSKASASPSTSSTSSRP 258
>gi|45120115 hypothetical protein LOC56905 [Homo sapiens]
Length = 1047
Score = 39.7 bits (91), Expect = 0.016
Identities = 63/245 (25%), Positives = 87/245 (35%), Gaps = 38/245 (15%)
Query: 169 QVCGPPLYQLGAA---TQARPPPHASGPRRRLGCERAWNHSVREAGVPLGLPAP--GARR 223
Q GPP G PPPH P + L C A H ++ LP G +
Sbjct: 255 QPLGPPCQDTGPTHYPPPHHPPPH---PPQALPCPPACRHPEKQGSYSPALPLQPLGGHK 311
Query: 224 RGGSASRSLPLPKRPRRGAAPEPERTPVGQGSWAHPGRTRGPSDRGFCVVSPARP----- 278
G + L P R+ AA P P+G ++ +P G + P P
Sbjct: 312 GTGYQAGGLGSPYL-RQQAAQAPYIPPLGLDAYPYPSAPLPAPSPGLKLEPPLTPRCPLD 370
Query: 279 ----------AEEATSLEGA---LSGTRHSHPSVGRQHHAGPPSTSRPPRPWDTPC---- 321
A + SL GA L GT S +V G + P P PC
Sbjct: 371 FAPQTLSFPYARDDLSLYGASPGLGGTPPSQNNVRAVPQPGAFQRACQPLPASQPCSEPV 430
Query: 322 -PPVYAETKHFLYSSGDKEQLRPSFLLSSLRPSLTGARRLVETIFLGSRPWMPGTPRRLP 380
P AE K +L S KE+L+P S P + + ++ + P +P R
Sbjct: 431 RPAQEAEEKTWL-PSCRKEKLQPRLSEHSGPPIV-----IRDSPVPCTPPALPPCARECQ 484
Query: 381 RLPQR 385
LPQ+
Sbjct: 485 SLPQK 489
>gi|4885237 forkhead box C2 [Homo sapiens]
Length = 501
Score = 39.3 bits (90), Expect = 0.021
Identities = 30/110 (27%), Positives = 39/110 (35%), Gaps = 2/110 (1%)
Query: 259 PGRTRGPSDRGFCVVSPARPAEEATSLEGALSGTRHSHPSVGRQHHAGPPSTSRP-PRPW 317
P SD SP A EGAL+ T H H G H PP P P+P
Sbjct: 352 PALDEALSDHPSGPTSPLSALNLAAGQEGALAATGHHHQHHGHHHPQAPPPPPAPQPQPT 411
Query: 318 DTPCPPVYAETKHFLYSSGDKEQLRPSFLLSSLRPSLTGARRLVETIFLG 367
P +L SGD L P ++ + + R + + LG
Sbjct: 412 PQPGAAAAQAASWYLNHSGDLNHL-PGHTFAAQQQTFPNVREMFNSHRLG 460
>gi|110832843 TBP-associated factor 4 [Homo sapiens]
Length = 1085
Score = 39.3 bits (90), Expect = 0.021
Identities = 44/163 (26%), Positives = 51/163 (31%), Gaps = 33/163 (20%)
Query: 163 APSCAYQVCGPPLYQLGAATQARPPPHASGPRRRLGCERAWNHSVREAGVPLGLPAPGAR 222
AP+ A PP AT ARPP H +GP P +P P A
Sbjct: 260 APAPAAPAAAPPPPPPAPATLARPPGHPAGP---------------PTAAP-AVPPPAAA 303
Query: 223 RRGGSASRSLPLPKRPRRGAAPEPERT---PVGQGSWAHPGRTRGPSDRGFCVVSPARPA 279
+ GGSA GAAP P P G PG G SP R
Sbjct: 304 QNGGSA------------GAAPAPAPAAGGPAGVSGQPGPGAAAAAPAPGVKAESPKRVV 351
Query: 280 EEATSLEGALSGTRHSHPSVGRQHHAGPPSTSRPPRPWDTPCP 322
+ A L+ + S GP P P P P
Sbjct: 352 QAAPPAAQTLAAS--GPASTAASMVIGPTMQGALPSPAAVPPP 392
Score = 35.8 bits (81), Expect = 0.24
Identities = 46/176 (26%), Positives = 61/176 (34%), Gaps = 26/176 (14%)
Query: 217 PAPGARRRGGSASRSLPLPKRPRRGAAPEPERTPVGQGSWAHPGRTRGPSDRGFCVVSPA 276
P GA A+ S P P AA P P PG GP +PA
Sbjct: 242 PFVGAAAPPAPAAPSPPAAPAPAAPAAAPPPPPPAPATLARPPGHPAGPP-----TAAPA 296
Query: 277 RPAEEATSLEGALSGTRHSHPSVGRQHHAGPPSTSRPPRPW---DTPCPPVYAET-KHFL 332
P A G+ P+ G GP S P P P P V AE+ K +
Sbjct: 297 VPPPAAAQNGGSAGAAPAPAPAAG-----GPAGVSGQPGPGAAAAAPAPGVKAESPKRVV 351
Query: 333 YSSGDKEQLRPSFLLSSLRPSLTGARRLVETIFLGSRPW-------MPGTPRRLPR 381
++ Q L++ P+ T A ++ G+ P PGTP LP+
Sbjct: 352 QAAPPAAQ-----TLAASGPASTAASMVIGPTMQGALPSPAAVPPPAPGTPTGLPK 402
Score = 31.6 bits (70), Expect = 4.5
Identities = 33/109 (30%), Positives = 38/109 (34%), Gaps = 4/109 (3%)
Query: 218 APGARRRGGSASRSLPLPKRPRRGAAPEPERTPVGQGSWAHPGRTRGPSD--RGFCVVSP 275
APGA A R+ P P+R P P R V G + R P + G C P
Sbjct: 82 APGAAPEPPPAGRARPGGGGPQRPGPPSPRRPLVPAGPAPPAAKLRPPPEGSAGSCAPVP 141
Query: 276 ARPAEEATSLEGALSGTRHSHPSVGRQHHAGP-PSTSRPPRPWDTPCPP 323
A A A E A +G AGP P P P P P
Sbjct: 142 A-AAAVAAGPEPAPAGPAKPAGPAALAARAGPGPGPGPGPGPGPGPGKP 189
>gi|42544123 splicing factor 1 isoform 3 [Homo sapiens]
Length = 548
Score = 39.3 bits (90), Expect = 0.021
Identities = 47/177 (26%), Positives = 58/177 (32%), Gaps = 36/177 (20%)
Query: 163 APSCAYQVCGPPLYQLGAATQARPPPHASGPRRRLGCERAWNHSVR------EAGVPLGL 216
AP A PP L + TQ+RPP SGP E H + G P
Sbjct: 343 APRPAAPANNPPPPSLMSTTQSRPPWMNSGP-----SESRPYHGMHGGGPGGPGGGPHSF 397
Query: 217 PAPGARRRGGSASRSLPLPKRPRRGAAP--EPERTPVGQGSWAHPGRTRGPSDRGFCVVS 274
P P GG P+ P P +P P+ QG HP GP
Sbjct: 398 PHPLPSLTGGHGGH--PMQHNPNGPPPPWMQPPPPPMNQG--PHPPGHHGPP-------- 445
Query: 275 PARPAEEATSLEGALSGTRHSH--------PSVGRQHHAGPPSTSRPPRPWDTPCPP 323
P ++ SG H P +G PP + +PP P P PP
Sbjct: 446 ---PMDQYLGSTPVGSGVYRLHQGKGMMPPPPMGMMPPPPPPPSGQPPPPPSGPLPP 499
>gi|42544125 splicing factor 1 isoform 2 [Homo sapiens]
Length = 638
Score = 39.3 bits (90), Expect = 0.021
Identities = 47/177 (26%), Positives = 58/177 (32%), Gaps = 36/177 (20%)
Query: 163 APSCAYQVCGPPLYQLGAATQARPPPHASGPRRRLGCERAWNHSVR------EAGVPLGL 216
AP A PP L + TQ+RPP SGP E H + G P
Sbjct: 343 APRPAAPANNPPPPSLMSTTQSRPPWMNSGP-----SESRPYHGMHGGGPGGPGGGPHSF 397
Query: 217 PAPGARRRGGSASRSLPLPKRPRRGAAP--EPERTPVGQGSWAHPGRTRGPSDRGFCVVS 274
P P GG P+ P P +P P+ QG HP GP
Sbjct: 398 PHPLPSLTGGHGGH--PMQHNPNGPPPPWMQPPPPPMNQG--PHPPGHHGPP-------- 445
Query: 275 PARPAEEATSLEGALSGTRHSH--------PSVGRQHHAGPPSTSRPPRPWDTPCPP 323
P ++ SG H P +G PP + +PP P P PP
Sbjct: 446 ---PMDQYLGSTPVGSGVYRLHQGKGMMPPPPMGMMPPPPPPPSGQPPPPPSGPLPP 499
>gi|42544130 splicing factor 1 isoform 1 [Homo sapiens]
Length = 639
Score = 39.3 bits (90), Expect = 0.021
Identities = 47/177 (26%), Positives = 58/177 (32%), Gaps = 36/177 (20%)
Query: 163 APSCAYQVCGPPLYQLGAATQARPPPHASGPRRRLGCERAWNHSVR------EAGVPLGL 216
AP A PP L + TQ+RPP SGP E H + G P
Sbjct: 343 APRPAAPANNPPPPSLMSTTQSRPPWMNSGP-----SESRPYHGMHGGGPGGPGGGPHSF 397
Query: 217 PAPGARRRGGSASRSLPLPKRPRRGAAP--EPERTPVGQGSWAHPGRTRGPSDRGFCVVS 274
P P GG P+ P P +P P+ QG HP GP
Sbjct: 398 PHPLPSLTGGHGGH--PMQHNPNGPPPPWMQPPPPPMNQG--PHPPGHHGPP-------- 445
Query: 275 PARPAEEATSLEGALSGTRHSH--------PSVGRQHHAGPPSTSRPPRPWDTPCPP 323
P ++ SG H P +G PP + +PP P P PP
Sbjct: 446 ---PMDQYLGSTPVGSGVYRLHQGKGMMPPPPMGMMPPPPPPPSGQPPPPPSGPLPP 499
>gi|37537692 proline-rich protein BstNI subfamily 4 precursor [Homo
sapiens]
Length = 247
Score = 39.3 bits (90), Expect = 0.021
Identities = 40/138 (28%), Positives = 47/138 (34%), Gaps = 30/138 (21%)
Query: 186 PPPHASGPRRRLGCERAWNHSVREAGVPLGLPAPGARRR-----GGSASRSLPLPKRPRR 240
PPPH P R + N S G P P PG R G + R P P +P R
Sbjct: 92 PPPHPGKPERPP--PQGGNQS---QGTP---PPPGKPERPPPQGGNQSHRPPPPPGKPER 143
Query: 241 GAAPEPERTPVGQGSWAHPGRTRGPSDRGFCVVSPARPAEEATSLEGALS--GTRHSHPS 298
P P+ QG HPG+ GP P +E A S G P
Sbjct: 144 ---PPPQGGNQSQGPPPHPGKPEGP------------PPQEGNKSRSARSPPGKPQGPPQ 188
Query: 299 VGRQHHAGPPSTSRPPRP 316
GPP +P P
Sbjct: 189 QEGNKPQGPPPPGKPQGP 206
Score = 33.1 bits (74), Expect = 1.5
Identities = 27/104 (25%), Positives = 36/104 (34%), Gaps = 12/104 (11%)
Query: 213 PLGLPAPGARRRGGSASRSLPLPKRPRRGAAPEPERTPVGQGSWAHPGRTRGPSDRGFCV 272
P G P G +GG+ S+ P P G P+ QG HPG+ P
Sbjct: 53 PPGKPQ-GPPPQGGNQSQGPPPPPGKPEGRPPQGGNQ--SQGPPPHPGKPERP------- 102
Query: 273 VSPARPAEEATSLEGALSGTRHSHPSVGRQHHAGPPSTSRPPRP 316
P + ++ P G Q H PP +P RP
Sbjct: 103 --PPQGGNQSQGTPPPPGKPERPPPQGGNQSHRPPPPPGKPERP 144
>gi|156523246 proline-rich transmembrane protein 2 [Homo sapiens]
Length = 340
Score = 39.3 bits (90), Expect = 0.021
Identities = 33/122 (27%), Positives = 42/122 (34%), Gaps = 6/122 (4%)
Query: 205 HSVREAGVP---LGLPAPGARRRGGSASRSLPLPKRPRRGAAPEPERTPVGQGSWAH-PG 260
HS E G P G+P + G + + P+ P+ G APE TP G A
Sbjct: 27 HSEAETGPPQVLAGVPDQPEAPQPGPNTTAAPVDSGPKAGLAPETTETPAGASETAQATD 86
Query: 261 RTRGPSDRGFCVVSPARPAEEATSLEGALSGTRHSHPSVGRQHHAGPPSTSRPPRPWDTP 320
+ P SP P +E S S R A PP + P P P
Sbjct: 87 LSLSPGGESKANCSPEDPCQETVSKPEVSKEATADQGS--RLESAAPPEPAPEPAPQPDP 144
Query: 321 CP 322
P
Sbjct: 145 RP 146
>gi|239756247 PREDICTED: hypothetical protein [Homo sapiens]
Length = 175
Score = 38.9 bits (89), Expect = 0.028
Identities = 43/149 (28%), Positives = 60/149 (40%), Gaps = 21/149 (14%)
Query: 207 VREAGVPLGLPAPGARRRGGSASRSLPLPKRPRRGAAPEPERTPVGQGSWAHPGRTR--- 263
+R G+ P P S+ P K+P +P P ++P G W PG +R
Sbjct: 12 LRHTGLVPPTPVPXGYPHQSFVSQPHPFRKQP----SPCPRQSPQGDFGWVTPGASRSVT 67
Query: 264 GPSDRGFCVVSPARPA-EEATSLEGALSGTRHSHPSVGRQHHAGPPSTSRPPRPWDTPCP 322
GPS SPA P+ SL L G R HP RQ G P P CP
Sbjct: 68 GPS-------SPAAPSLISLGSLGSHLXGAR-PHP---RQSSLGDFGLVTPGAPCCRLCP 116
Query: 323 PVYAETKH--FLYSSGDKEQLRPSFLLSS 349
P+ ++ +G ++L P+ +L S
Sbjct: 117 PLLLPQGRPPWVLCAGVSKELGPNPVLPS 145
>gi|239750790 PREDICTED: hypothetical protein XP_002347558 [Homo
sapiens]
Length = 175
Score = 38.9 bits (89), Expect = 0.028
Identities = 43/149 (28%), Positives = 60/149 (40%), Gaps = 21/149 (14%)
Query: 207 VREAGVPLGLPAPGARRRGGSASRSLPLPKRPRRGAAPEPERTPVGQGSWAHPGRTR--- 263
+R G+ P P S+ P K+P +P P ++P G W PG +R
Sbjct: 12 LRHTGLVPPTPVPLGYPHQSFVSQPHPFSKQP----SPCPRQSPQGDFGWVSPGASRSIT 67
Query: 264 GPSDRGFCVVSPARPA-EEATSLEGALSGTRHSHPSVGRQHHAGPPSTSRPPRPWDTPCP 322
GPS SPA P+ SL L G R HP RQ G P P CP
Sbjct: 68 GPS-------SPAAPSLISLGSLGSHLQGAR-PHP---RQSSLGDFGLVTPGTPCCRLCP 116
Query: 323 PVYAETKH--FLYSSGDKEQLRPSFLLSS 349
P+ ++ +G ++L P+ +L S
Sbjct: 117 PLLLPQGRPPWVLCAGVSKELGPNPVLPS 145
>gi|239745150 PREDICTED: hypothetical protein XP_002343411 [Homo
sapiens]
Length = 175
Score = 38.9 bits (89), Expect = 0.028
Identities = 43/149 (28%), Positives = 60/149 (40%), Gaps = 21/149 (14%)
Query: 207 VREAGVPLGLPAPGARRRGGSASRSLPLPKRPRRGAAPEPERTPVGQGSWAHPGRTR--- 263
+R G+ P P S+ P K+P +P P ++P G W PG +R
Sbjct: 12 LRHTGLVPPTPVPLGYPHQSFVSQPHPFSKQP----SPCPRQSPQGDFGWVSPGASRSIT 67
Query: 264 GPSDRGFCVVSPARPA-EEATSLEGALSGTRHSHPSVGRQHHAGPPSTSRPPRPWDTPCP 322
GPS SPA P+ SL L G R HP RQ G P P CP
Sbjct: 68 GPS-------SPAAPSLISLGSLGSHLQGAR-PHP---RQSSLGDFGLVTPGTPCCRLCP 116
Query: 323 PVYAETKH--FLYSSGDKEQLRPSFLLSS 349
P+ ++ +G ++L P+ +L S
Sbjct: 117 PLLLPQGRPPWVLCAGVSKELGPNPVLPS 145
>gi|239745134 PREDICTED: hypothetical protein XP_002343399 [Homo
sapiens]
Length = 175
Score = 38.9 bits (89), Expect = 0.028
Identities = 43/149 (28%), Positives = 60/149 (40%), Gaps = 21/149 (14%)
Query: 207 VREAGVPLGLPAPGARRRGGSASRSLPLPKRPRRGAAPEPERTPVGQGSWAHPGRTR--- 263
+R G+ P P S+ P K+P +P P ++P G W PG +R
Sbjct: 12 LRHTGLVPPTPVPLGYPHQSFVSQPHPFSKQP----SPCPRQSPQGDFGWVSPGASRSIT 67
Query: 264 GPSDRGFCVVSPARPA-EEATSLEGALSGTRHSHPSVGRQHHAGPPSTSRPPRPWDTPCP 322
GPS SPA P+ SL L G R HP RQ G P P CP
Sbjct: 68 GPS-------SPAAPSLISLGSLGSHLQGAR-PHP---RQSSLGDFGLVTPGTPCCRLCP 116
Query: 323 PVYAETKH--FLYSSGDKEQLRPSFLLSS 349
P+ ++ +G ++L P+ +L S
Sbjct: 117 PLLLPQGRPPWVLCAGVSKELGPNPVLPS 145
>gi|239745119 PREDICTED: hypothetical protein XP_002343397 [Homo
sapiens]
Length = 175
Score = 38.9 bits (89), Expect = 0.028
Identities = 43/149 (28%), Positives = 60/149 (40%), Gaps = 21/149 (14%)
Query: 207 VREAGVPLGLPAPGARRRGGSASRSLPLPKRPRRGAAPEPERTPVGQGSWAHPGRTR--- 263
+R G+ P P S+ P K+P +P P ++P G W PG +R
Sbjct: 12 LRHTGLVPPTPVPLGYPHQSFVSQPHPFSKQP----SPCPRQSPQGDFGWVSPGASRSIT 67
Query: 264 GPSDRGFCVVSPARPA-EEATSLEGALSGTRHSHPSVGRQHHAGPPSTSRPPRPWDTPCP 322
GPS SPA P+ SL L G R HP RQ G P P CP
Sbjct: 68 GPS-------SPAAPSLISLGSLGSHLQGAR-PHP---RQSSLGDFGLVTPGTPCCRLCP 116
Query: 323 PVYAETKH--FLYSSGDKEQLRPSFLLSS 349
P+ ++ +G ++L P+ +L S
Sbjct: 117 PLLLPQGRPPWVLCAGVSKELGPNPVLPS 145
>gi|239745116 PREDICTED: hypothetical protein XP_002343387 [Homo
sapiens]
Length = 175
Score = 38.9 bits (89), Expect = 0.028
Identities = 43/149 (28%), Positives = 60/149 (40%), Gaps = 21/149 (14%)
Query: 207 VREAGVPLGLPAPGARRRGGSASRSLPLPKRPRRGAAPEPERTPVGQGSWAHPGRTR--- 263
+R G+ P P S+ P K+P +P P ++P G W PG +R
Sbjct: 12 LRHTGLVPPTPVPLGYPHQSFVSQPHPFSKQP----SPCPRQSPQGDFGWVSPGASRSIT 67
Query: 264 GPSDRGFCVVSPARPA-EEATSLEGALSGTRHSHPSVGRQHHAGPPSTSRPPRPWDTPCP 322
GPS SPA P+ SL L G R HP RQ G P P CP
Sbjct: 68 GPS-------SPAAPSLISLGSLGSHLQGAR-PHP---RQSSLGDFGLVTPGTPCCRLCP 116
Query: 323 PVYAETKH--FLYSSGDKEQLRPSFLLSS 349
P+ ++ +G ++L P+ +L S
Sbjct: 117 PLLLPQGRPPWVLCAGVSKELGPNPVLPS 145
>gi|191252816 extracellular leucine-rich repeat and fibronectin type
III domain containing 1 [Homo sapiens]
Length = 828
Score = 38.5 bits (88), Expect = 0.036
Identities = 42/148 (28%), Positives = 56/148 (37%), Gaps = 17/148 (11%)
Query: 170 VCGPPLYQLGAATQARPPPHASGPRRRLGCERAWNHSVREAGVPLGLPAPGARRRGGSAS 229
V PPL L A+ A G + G +HSV AG P R S+S
Sbjct: 593 VAEPPLVLLSEPLAAKHGFLAPGYKDAFGHSLQRHHSVEAAGPP---------RASTSSS 643
Query: 230 RSLPLPKRPRRGAAPEPERTPVGQGSWAHPGRTRGPSDRGFCVVSPARPAEEATSLEGAL 289
S+ P R R A + + + G P+ V+PA A + +G
Sbjct: 644 GSVRSP-RAFRAEAVGVHKAAAAEAKYIEKG---SPAADAILTVTPAAAVLRAEAEKGRQ 699
Query: 290 SGT-RHSHPSVGRQHHAGPPSTSRPPRP 316
G RHS+P H A PP+ PP P
Sbjct: 700 YGEHRHSYPG---SHPAEPPAPPGPPPP 724
>gi|91199543 myeloid/lymphoid or mixed-lineage leukemia 5 [Homo
sapiens]
Length = 1858
Score = 38.5 bits (88), Expect = 0.036
Identities = 42/158 (26%), Positives = 52/158 (32%), Gaps = 13/158 (8%)
Query: 186 PPPHASGPRRRLGCERAWNHSVREAGVPLGLPAPGARRRGGSASRSLPLPKRPRRGAAPE 245
PPP A GP HSV P+ PG+ +A LP P P G AP
Sbjct: 1631 PPPPAPGPHLVQQPNSHQQHSVAHVVGPVHAVTPGSHIHSQTAGHHLP-PPPPPPGPAPH 1689
Query: 246 PERTPVGQGSWAHPGR-TRGPSDRGFCVVSPARPAEEATSLEGALSGTRHSHPSVGRQH- 303
P HP +G + VV+ A P L+ H+ + H
Sbjct: 1690 HHPPP-------HPSTGLQGLQAQHQHVVNSAPPPPPPPPPSSVLASGHHTTSAQALHHP 1742
Query: 304 -HAGPPSTSRPPRPWDTPCPPVYAETKHFLYSSGDKEQ 340
H GPP P P P T H G + Q
Sbjct: 1743 PHQGPPLFPSSAHPTVPPYPS--QATHHTTLGPGPQHQ 1778
>gi|33636768 myeloid/lymphoid or mixed-lineage leukemia 5 [Homo
sapiens]
Length = 1858
Score = 38.5 bits (88), Expect = 0.036
Identities = 42/158 (26%), Positives = 52/158 (32%), Gaps = 13/158 (8%)
Query: 186 PPPHASGPRRRLGCERAWNHSVREAGVPLGLPAPGARRRGGSASRSLPLPKRPRRGAAPE 245
PPP A GP HSV P+ PG+ +A LP P P G AP
Sbjct: 1631 PPPPAPGPHLVQQPNSHQQHSVAHVVGPVHAVTPGSHIHSQTAGHHLP-PPPPPPGPAPH 1689
Query: 246 PERTPVGQGSWAHPGR-TRGPSDRGFCVVSPARPAEEATSLEGALSGTRHSHPSVGRQH- 303
P HP +G + VV+ A P L+ H+ + H
Sbjct: 1690 HHPPP-------HPSTGLQGLQAQHQHVVNSAPPPPPPPPPSSVLASGHHTTSAQALHHP 1742
Query: 304 -HAGPPSTSRPPRPWDTPCPPVYAETKHFLYSSGDKEQ 340
H GPP P P P T H G + Q
Sbjct: 1743 PHQGPPLFPSSAHPTVPPYPS--QATHHTTLGPGPQHQ 1778
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.324 0.138 0.434
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 48,345,820
Number of Sequences: 37866
Number of extensions: 2488334
Number of successful extensions: 11375
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 323
Number of HSP's that attempted gapping in prelim test: 10736
Number of HSP's gapped (non-prelim): 879
length of query: 1132
length of database: 18,247,518
effective HSP length: 113
effective length of query: 1019
effective length of database: 13,968,660
effective search space: 14234064540
effective search space used: 14234064540
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 67 (30.4 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.