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Search of human proteins with 109452597
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|109452597 chromosome 10 open reading frame 46 [Homo sapiens]
(369 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|109452597 chromosome 10 open reading frame 46 [Homo sapiens] 747 0.0
gi|4503165 cullin 3 [Homo sapiens] 51 1e-06
gi|148596988 mucoepidermoid carcinoma translocated 1 isoform 3 [... 45 1e-04
gi|148596965 mucoepidermoid carcinoma translocated 1 isoform 1 [... 45 1e-04
gi|238859557 regulatory factor X1 [Homo sapiens] 42 9e-04
gi|18079216 CASK interacting protein 1 [Homo sapiens] 40 0.003
gi|32307177 forkhead box G1 [Homo sapiens] 40 0.003
gi|112789555 ADAM metallopeptidase with thrombospondin type 1 mo... 40 0.003
gi|157743259 H6 family homeobox 3 [Homo sapiens] 39 0.006
gi|40217801 hypothetical protein LOC79864 isoform 2 [Homo sapiens] 39 0.006
gi|18959210 WIRE protein [Homo sapiens] 39 0.006
gi|40217799 hypothetical protein LOC79864 isoform 1 [Homo sapiens] 39 0.006
gi|68161504 Wiskott-Aldrich syndrome protein family member 1 [Ho... 39 0.007
gi|68161502 Wiskott-Aldrich syndrome protein family member 1 [Ho... 39 0.007
gi|68161500 Wiskott-Aldrich syndrome protein family member 1 [Ho... 39 0.007
gi|4507913 Wiskott-Aldrich syndrome protein family member 1 [Hom... 39 0.007
gi|19923350 nuclear factor of activated T-cells, cytosolic compo... 39 0.007
gi|27502393 nuclear factor of activated T-cells, cytosolic compo... 39 0.007
gi|56118221 amyloid beta (A4) precursor protein-binding, family ... 39 0.007
gi|4507909 Wiskott-Aldrich syndrome protein [Homo sapiens] 39 0.010
gi|195963316 PWWP domain containing 2A isoform b [Homo sapiens] 39 0.010
gi|153791982 PWWP domain containing 2A isoform a [Homo sapiens] 39 0.010
gi|14602439 Williams Beuren syndrome chromosome region 14 isofor... 38 0.013
gi|14602437 Williams Beuren syndrome chromosome region 14 isofor... 38 0.013
gi|14602435 Williams Beuren syndrome chromosome region 14 isofor... 38 0.013
gi|14602433 Williams Beuren syndrome chromosome region 14 isofor... 38 0.013
gi|126090663 zinc finger homeodomain 4 [Homo sapiens] 38 0.013
gi|226498192 atonal homolog 8 [Homo sapiens] 38 0.017
gi|51702526 Wiskott-Aldrich syndrome gene-like protein [Homo sap... 38 0.017
gi|6912460 GRB2-associated binding protein 2 isoform b [Homo sap... 38 0.017
>gi|109452597 chromosome 10 open reading frame 46 [Homo sapiens]
Length = 369
Score = 747 bits (1928), Expect = 0.0
Identities = 369/369 (100%), Positives = 369/369 (100%)
Query: 1 MEESMEEEEGGSYEAMMDDQNHNNWEAAVDGFRQPLPPPPPPSSIPAPAREPPGGQLLAV 60
MEESMEEEEGGSYEAMMDDQNHNNWEAAVDGFRQPLPPPPPPSSIPAPAREPPGGQLLAV
Sbjct: 1 MEESMEEEEGGSYEAMMDDQNHNNWEAAVDGFRQPLPPPPPPSSIPAPAREPPGGQLLAV 60
Query: 61 PAVSVDRKGPKEGLPMGPQPPPEANGVIMMLKSCDAAAAVAKAAPAPTASSTININTSTS 120
PAVSVDRKGPKEGLPMGPQPPPEANGVIMMLKSCDAAAAVAKAAPAPTASSTININTSTS
Sbjct: 61 PAVSVDRKGPKEGLPMGPQPPPEANGVIMMLKSCDAAAAVAKAAPAPTASSTININTSTS 120
Query: 121 KFLMNVITIEDYKSTYWPKLDGAIDQLLTQSPGDYIPISYEQIYSCVYKCVCQQHSEQMY 180
KFLMNVITIEDYKSTYWPKLDGAIDQLLTQSPGDYIPISYEQIYSCVYKCVCQQHSEQMY
Sbjct: 121 KFLMNVITIEDYKSTYWPKLDGAIDQLLTQSPGDYIPISYEQIYSCVYKCVCQQHSEQMY 180
Query: 181 SDLIKKITNHLERVSKELQASPPDLYIERFNIALGQYMGALQSIVPLFIYMNKFYIETKL 240
SDLIKKITNHLERVSKELQASPPDLYIERFNIALGQYMGALQSIVPLFIYMNKFYIETKL
Sbjct: 181 SDLIKKITNHLERVSKELQASPPDLYIERFNIALGQYMGALQSIVPLFIYMNKFYIETKL 240
Query: 241 NRDLKDDLIKLFTEHVAEKHIYSLMPLLLEAQSTPFQVTPSTMANIVKGLYTLRPEWVQM 300
NRDLKDDLIKLFTEHVAEKHIYSLMPLLLEAQSTPFQVTPSTMANIVKGLYTLRPEWVQM
Sbjct: 241 NRDLKDDLIKLFTEHVAEKHIYSLMPLLLEAQSTPFQVTPSTMANIVKGLYTLRPEWVQM 300
Query: 301 APTLFSKFIPNILPPAVESELSEYAAQDQKFQRELIQNGFTRGDQSRKRAGDELAYNSSS 360
APTLFSKFIPNILPPAVESELSEYAAQDQKFQRELIQNGFTRGDQSRKRAGDELAYNSSS
Sbjct: 301 APTLFSKFIPNILPPAVESELSEYAAQDQKFQRELIQNGFTRGDQSRKRAGDELAYNSSS 360
Query: 361 ACASSRGYR 369
ACASSRGYR
Sbjct: 361 ACASSRGYR 369
>gi|4503165 cullin 3 [Homo sapiens]
Length = 768
Score = 51.2 bits (121), Expect = 1e-06
Identities = 27/109 (24%), Positives = 59/109 (54%), Gaps = 4/109 (3%)
Query: 130 EDYKSTYWPKLDGAIDQLLTQSPGDYIPISYEQIYSCVYKCVCQQHSEQMYSDLIKKITN 189
E Y ++ W L AI ++ ++ +S+E++Y Y V +H E++Y+ L + +T
Sbjct: 27 EKYVNSIWDLLKNAIQEIQRKNNSG---LSFEELYRNAYTMVLHKHGEKLYTGLREVVTE 83
Query: 190 HL-ERVSKELQASPPDLYIERFNIALGQYMGALQSIVPLFIYMNKFYIE 237
HL +V +++ S + +++ N A + A+ I + +YM++ Y++
Sbjct: 84 HLINKVREDVLNSLNNNFLQTLNQAWNDHQTAMVMIRDILMYMDRVYVQ 132
>gi|148596988 mucoepidermoid carcinoma translocated 1 isoform 3
[Homo sapiens]
Length = 650
Score = 45.1 bits (105), Expect = 1e-04
Identities = 27/58 (46%), Positives = 27/58 (46%), Gaps = 18/58 (31%)
Query: 34 QPLPPPPPPSSIP-------APAREPPGGQLLAVPAVSVDRKGPKEGLPMGPQPPPEA 84
QP PPPPP S P AP R PPGG LL P L GPQPPP A
Sbjct: 384 QPPPPPPPASQQPPPPPPPQAPVRLPPGGPLL-----------PSASLTRGPQPPPLA 430
>gi|148596965 mucoepidermoid carcinoma translocated 1 isoform 1
[Homo sapiens]
Length = 634
Score = 45.1 bits (105), Expect = 1e-04
Identities = 27/58 (46%), Positives = 27/58 (46%), Gaps = 18/58 (31%)
Query: 34 QPLPPPPPPSSIP-------APAREPPGGQLLAVPAVSVDRKGPKEGLPMGPQPPPEA 84
QP PPPPP S P AP R PPGG LL P L GPQPPP A
Sbjct: 368 QPPPPPPPASQQPPPPPPPQAPVRLPPGGPLL-----------PSASLTRGPQPPPLA 414
>gi|238859557 regulatory factor X1 [Homo sapiens]
Length = 979
Score = 42.0 bits (97), Expect = 9e-04
Identities = 34/109 (31%), Positives = 46/109 (42%), Gaps = 36/109 (33%)
Query: 34 QPLPPPPPPSSIPAPAR-----------------------EPPGGQ------LLAVPAVS 64
QP PPPPPP + P P + +PPGGQ L AVPA S
Sbjct: 26 QPQPPPPPPPAAPQPPQPPTAAATPQPQYVTELQSPQPQAQPPGGQKQYVTELPAVPAPS 85
Query: 65 VDRKGPKEGLPMGPQPPPEANGVIMMLK-SCDAAAAVAKAAPAPTASST 112
P P P P+ V+ + + + A+ V++A+P TAS T
Sbjct: 86 QPTGAPT------PSPAPQQYIVVTVSEGAMRASETVSEASPGSTASQT 128
>gi|18079216 CASK interacting protein 1 [Homo sapiens]
Length = 1431
Score = 40.4 bits (93), Expect = 0.003
Identities = 33/93 (35%), Positives = 38/93 (40%), Gaps = 24/93 (25%)
Query: 35 PLPPPPP------------------PSSIPAPAREPPGGQLLAVPAVSVDRKGPKEGLPM 76
P PPPPP PS P+PAR+PP LA P + G P
Sbjct: 1272 PKPPPPPTAPKPVKAVAGLPSGSAGPSPAPSPARQPPAA--LAKPPGTPPSLGASPAKP- 1328
Query: 77 GPQPPPEANGVIMMLKSCDAAAAVAKAAPAPTA 109
P P A + + K AAAA A AA AP A
Sbjct: 1329 ---PSPGAPALHVPAKPPRAAAAAAAAAAAPPA 1358
Score = 33.9 bits (76), Expect = 0.24
Identities = 31/81 (38%), Positives = 32/81 (39%), Gaps = 18/81 (22%)
Query: 31 GFRQPLPPPPPPSSIPAPAREPPG--GQLLAVPAVSVDRKGPKEGLPM--GPQPPPEANG 86
G P P P P PA +PPG L A PA K P G P P PP A
Sbjct: 1293 GSAGPSPAPSPARQPPAALAKPPGTPPSLGASPA-----KPPSPGAPALHVPAKPPRA-- 1345
Query: 87 VIMMLKSCDAAAAVAKAAPAP 107
AAAA A A PAP
Sbjct: 1346 -------AAAAAAAAAAPPAP 1359
Score = 30.4 bits (67), Expect = 2.6
Identities = 18/48 (37%), Positives = 20/48 (41%), Gaps = 1/48 (2%)
Query: 37 PPPPPPSSIPAPAREP-PGGQLLAVPAVSVDRKGPKEGLPMGPQPPPE 83
PP PPS +PA+ P PG L VPA P PPE
Sbjct: 1314 PPGTPPSLGASPAKPPSPGAPALHVPAKPPRAAAAAAAAAAAPPAPPE 1361
Score = 29.6 bits (65), Expect = 4.5
Identities = 18/47 (38%), Positives = 21/47 (44%), Gaps = 12/47 (25%)
Query: 36 LPPPPPPSSIPAPAREPPGGQLLAVPAVSVDRKGPKEGLPMGPQPPP 82
LPPPPPP+ EPP L +P + P EG P PP
Sbjct: 1191 LPPPPPPA-------EPPPTDLAHLPPLP-----PPEGEARKPAKPP 1225
>gi|32307177 forkhead box G1 [Homo sapiens]
Length = 489
Score = 40.0 bits (92), Expect = 0.003
Identities = 26/55 (47%), Positives = 29/55 (52%), Gaps = 8/55 (14%)
Query: 35 PLPPPPP----PSSIPAPAREPPGGQLLAVPAVSVDRKGPKEGL-PMGPQPPPEA 84
P PPPPP P P PA +PP Q PA D KGP++ L P P PPP A
Sbjct: 63 PQPPPPPQQQQPPPPPPPAPQPP--QTRGAPAAD-DDKGPQQLLLPPPPPPPPAA 114
Score = 39.3 bits (90), Expect = 0.006
Identities = 24/52 (46%), Positives = 28/52 (53%), Gaps = 8/52 (15%)
Query: 33 RQPLPPPPPPSSIPAPAREPPGGQLLAVPAVSVDRKGPKEGLPMGPQPPPEA 84
+Q PPPPPP PA +PP Q PA D KGP++ L P PPP A
Sbjct: 70 QQQQPPPPPP-----PAPQPP--QTRGAPAAD-DDKGPQQLLLPPPPPPPPA 113
Score = 29.3 bits (64), Expect = 5.9
Identities = 19/56 (33%), Positives = 24/56 (42%), Gaps = 3/56 (5%)
Query: 31 GFRQPLPPPPPPSSIPAPAREPPGGQLLAVPAVSVDRKGPKEGLPMGPQPPPEANG 86
G +Q L PPPPP P PA G + + GP E P+GP + G
Sbjct: 98 GPQQLLLPPPPP---PPPAAALDGAKADGLGGKGEPGGGPGELAPVGPDEKEKGAG 150
>gi|112789555 ADAM metallopeptidase with thrombospondin type 1
motif, 19 preproprotein [Homo sapiens]
Length = 1207
Score = 40.0 bits (92), Expect = 0.003
Identities = 38/116 (32%), Positives = 45/116 (38%), Gaps = 29/116 (25%)
Query: 3 ESMEEEEGGSYEAMMDDQNHNNWEAAVDGFRQPLPPPPPPSSIPAPAREPPGGQ-LLAVP 61
ES E G S A + +W+ P PP PPPS PA EP G + LL +P
Sbjct: 118 ESQELPRGSSGAAALSPGAPASWQP-------PPPPQPPPSPPPAQHAEPDGDEVLLRIP 170
Query: 62 AVSVD------RKG----PKEGLPMGPQPPPEANGVIMMLKSCDAAAAVAKAAPAP 107
A S D R G P+ + P P P G AA A PAP
Sbjct: 171 AFSRDLYLLLRRDGRFLAPRFAVEQRPNPGPGPTG-----------AASAPQPPAP 215
>gi|157743259 H6 family homeobox 3 [Homo sapiens]
Length = 357
Score = 39.3 bits (90), Expect = 0.006
Identities = 32/84 (38%), Positives = 35/84 (41%), Gaps = 14/84 (16%)
Query: 26 EAAVDGFRQPLPPPPPPSSIPAPAREPPGGQLLAVPAVSVDRKGPKEGLPMGPQPPPEAN 85
+AA QP PPPPPP PAP P + L G P PQPPP
Sbjct: 7 DAAGTASAQPQPPPPPP---PAPKESPFSIKNLL--------NGDHHRPPPKPQPPPR-- 53
Query: 86 GVIMMLKSCDAAAAVAKAAPAPTA 109
+ S AAAA A AA A A
Sbjct: 54 -TLFAPASAAAAAAAAAAAAAKGA 76
>gi|40217801 hypothetical protein LOC79864 isoform 2 [Homo sapiens]
Length = 307
Score = 39.3 bits (90), Expect = 0.006
Identities = 24/80 (30%), Positives = 35/80 (43%), Gaps = 1/80 (1%)
Query: 5 MEEEEGGSYEAMMDDQNHNNWEAAVDGFRQPLPPPPPPSSI-PAPAREPPGGQLLAVPAV 63
MEEE G M +QNH+ W+ + +QP+ P + GQLL+V A+
Sbjct: 88 MEEEASGKAAQMAREQNHHTWDQGANNRQQPIEDKYSDLRYDPNWKSKKEEGQLLSVEAL 147
Query: 64 SVDRKGPKEGLPMGPQPPPE 83
E LP+ P P +
Sbjct: 148 PESTDSSLENLPLAPLYPSQ 167
>gi|18959210 WIRE protein [Homo sapiens]
Length = 440
Score = 39.3 bits (90), Expect = 0.006
Identities = 25/75 (33%), Positives = 33/75 (44%), Gaps = 10/75 (13%)
Query: 20 QNHNNWEAAVDGFRQPLPPPPPPSSIPA--------PAREPPGGQLLAVPAVSVDRKGPK 71
Q HN+ G + L PPPP S+ P+ PAR+PP P V R G +
Sbjct: 278 QRHNSLHRKTPGPVRGLAPPPPTSASPSLLSNRPPPPARDPPSRGAAPPPPPPVIRNGAR 337
Query: 72 EGLPMGPQPPPEANG 86
+ P P PP +G
Sbjct: 338 DAPP--PPPPYRMHG 350
Score = 33.1 bits (74), Expect = 0.41
Identities = 20/47 (42%), Positives = 22/47 (46%), Gaps = 3/47 (6%)
Query: 35 PLPPPPPPSSIPAPAREPPGGQLLAVPAVSVDRKGPKEGLPMGPQPP 81
P PPP P P R P GQ LA P R+ P G+P GP P
Sbjct: 225 PAPPPVKPPPSPVNIRTGPSGQSLAPPPPPY-RQPP--GVPNGPSSP 268
>gi|40217799 hypothetical protein LOC79864 isoform 1 [Homo sapiens]
Length = 778
Score = 39.3 bits (90), Expect = 0.006
Identities = 24/80 (30%), Positives = 35/80 (43%), Gaps = 1/80 (1%)
Query: 5 MEEEEGGSYEAMMDDQNHNNWEAAVDGFRQPLPPPPPPSSI-PAPAREPPGGQLLAVPAV 63
MEEE G M +QNH+ W+ + +QP+ P + GQLL+V A+
Sbjct: 88 MEEEASGKAAQMAREQNHHTWDQGANNRQQPIEDKYSDLRYDPNWKSKKEEGQLLSVEAL 147
Query: 64 SVDRKGPKEGLPMGPQPPPE 83
E LP+ P P +
Sbjct: 148 PESTDSSLENLPLAPLYPSQ 167
>gi|68161504 Wiskott-Aldrich syndrome protein family member 1 [Homo
sapiens]
Length = 559
Score = 38.9 bits (89), Expect = 0.007
Identities = 23/71 (32%), Positives = 30/71 (42%), Gaps = 12/71 (16%)
Query: 35 PLPPPPPPSSIPAPAREPPGGQLLAVPAVSVDRKGPKEGLPMGPQPPPEANGVIMMLKSC 94
P PPPPP +++ APA PP L P V + P PPP A ++
Sbjct: 353 PPPPPPPATALQAPAVPPPPAPLQIAPGV------------LHPAPPPIAPPLVQPSPPV 400
Query: 95 DAAAAVAKAAP 105
AA V + P
Sbjct: 401 ARAAPVCETVP 411
Score = 31.2 bits (69), Expect = 1.6
Identities = 16/48 (33%), Positives = 18/48 (37%)
Query: 34 QPLPPPPPPSSIPAPAREPPGGQLLAVPAVSVDRKGPKEGLPMGPQPP 81
Q LPPPPPP +P P P + A P GP P
Sbjct: 421 QGLPPPPPPPPLPPPGIRPSSPVTVTALAHPPSGLHPTPSTAPGPHVP 468
>gi|68161502 Wiskott-Aldrich syndrome protein family member 1 [Homo
sapiens]
Length = 559
Score = 38.9 bits (89), Expect = 0.007
Identities = 23/71 (32%), Positives = 30/71 (42%), Gaps = 12/71 (16%)
Query: 35 PLPPPPPPSSIPAPAREPPGGQLLAVPAVSVDRKGPKEGLPMGPQPPPEANGVIMMLKSC 94
P PPPPP +++ APA PP L P V + P PPP A ++
Sbjct: 353 PPPPPPPATALQAPAVPPPPAPLQIAPGV------------LHPAPPPIAPPLVQPSPPV 400
Query: 95 DAAAAVAKAAP 105
AA V + P
Sbjct: 401 ARAAPVCETVP 411
Score = 31.2 bits (69), Expect = 1.6
Identities = 16/48 (33%), Positives = 18/48 (37%)
Query: 34 QPLPPPPPPSSIPAPAREPPGGQLLAVPAVSVDRKGPKEGLPMGPQPP 81
Q LPPPPPP +P P P + A P GP P
Sbjct: 421 QGLPPPPPPPPLPPPGIRPSSPVTVTALAHPPSGLHPTPSTAPGPHVP 468
>gi|68161500 Wiskott-Aldrich syndrome protein family member 1 [Homo
sapiens]
Length = 559
Score = 38.9 bits (89), Expect = 0.007
Identities = 23/71 (32%), Positives = 30/71 (42%), Gaps = 12/71 (16%)
Query: 35 PLPPPPPPSSIPAPAREPPGGQLLAVPAVSVDRKGPKEGLPMGPQPPPEANGVIMMLKSC 94
P PPPPP +++ APA PP L P V + P PPP A ++
Sbjct: 353 PPPPPPPATALQAPAVPPPPAPLQIAPGV------------LHPAPPPIAPPLVQPSPPV 400
Query: 95 DAAAAVAKAAP 105
AA V + P
Sbjct: 401 ARAAPVCETVP 411
Score = 31.2 bits (69), Expect = 1.6
Identities = 16/48 (33%), Positives = 18/48 (37%)
Query: 34 QPLPPPPPPSSIPAPAREPPGGQLLAVPAVSVDRKGPKEGLPMGPQPP 81
Q LPPPPPP +P P P + A P GP P
Sbjct: 421 QGLPPPPPPPPLPPPGIRPSSPVTVTALAHPPSGLHPTPSTAPGPHVP 468
>gi|4507913 Wiskott-Aldrich syndrome protein family member 1 [Homo
sapiens]
Length = 559
Score = 38.9 bits (89), Expect = 0.007
Identities = 23/71 (32%), Positives = 30/71 (42%), Gaps = 12/71 (16%)
Query: 35 PLPPPPPPSSIPAPAREPPGGQLLAVPAVSVDRKGPKEGLPMGPQPPPEANGVIMMLKSC 94
P PPPPP +++ APA PP L P V + P PPP A ++
Sbjct: 353 PPPPPPPATALQAPAVPPPPAPLQIAPGV------------LHPAPPPIAPPLVQPSPPV 400
Query: 95 DAAAAVAKAAP 105
AA V + P
Sbjct: 401 ARAAPVCETVP 411
Score = 31.2 bits (69), Expect = 1.6
Identities = 16/48 (33%), Positives = 18/48 (37%)
Query: 34 QPLPPPPPPSSIPAPAREPPGGQLLAVPAVSVDRKGPKEGLPMGPQPP 81
Q LPPPPPP +P P P + A P GP P
Sbjct: 421 QGLPPPPPPPPLPPPGIRPSSPVTVTALAHPPSGLHPTPSTAPGPHVP 468
>gi|19923350 nuclear factor of activated T-cells, cytosolic
component 1 isoform B [Homo sapiens]
Length = 825
Score = 38.9 bits (89), Expect = 0.007
Identities = 37/113 (32%), Positives = 51/113 (45%), Gaps = 30/113 (26%)
Query: 41 PPSSIPAPAREPPGGQLLAVPAVSVDRKGPKEGLPMGPQPPPEANGVIMMLKSCD----- 95
P +S P P++ P G PA +V +G G P P A G +KS +
Sbjct: 2 PSTSFPVPSKFPLG------PAAAVFGRGETLG------PAPRAGGT---MKSAEEEHYG 46
Query: 96 -AAAAVAKAAPAPTASSTI-----NINTSTSKFLMNVITIEDYKSTYWPKLDG 142
A++ V+ A P PTA ST+ N+ TST +I D+ S Y LDG
Sbjct: 47 YASSNVSPALPLPTAHSTLPAPCHNLQTSTP----GIIPPADHPSGYGAALDG 95
>gi|27502393 nuclear factor of activated T-cells, cytosolic
component 1 isoform A [Homo sapiens]
Length = 716
Score = 38.9 bits (89), Expect = 0.007
Identities = 37/113 (32%), Positives = 51/113 (45%), Gaps = 30/113 (26%)
Query: 41 PPSSIPAPAREPPGGQLLAVPAVSVDRKGPKEGLPMGPQPPPEANGVIMMLKSCD----- 95
P +S P P++ P G PA +V +G G P P A G +KS +
Sbjct: 2 PSTSFPVPSKFPLG------PAAAVFGRGETLG------PAPRAGGT---MKSAEEEHYG 46
Query: 96 -AAAAVAKAAPAPTASSTI-----NINTSTSKFLMNVITIEDYKSTYWPKLDG 142
A++ V+ A P PTA ST+ N+ TST +I D+ S Y LDG
Sbjct: 47 YASSNVSPALPLPTAHSTLPAPCHNLQTSTP----GIIPPADHPSGYGAALDG 95
>gi|56118221 amyloid beta (A4) precursor protein-binding, family B,
member 1 interacting protein [Homo sapiens]
Length = 666
Score = 38.9 bits (89), Expect = 0.007
Identities = 26/77 (33%), Positives = 29/77 (37%), Gaps = 5/77 (6%)
Query: 36 LPPPPPPSSIPAPAREPPGGQLLAVPAVSVDRKGPKEGLPMG-----PQPPPEANGVIMM 90
LPPPPPP + P PP + P V P G P PPP A +
Sbjct: 554 LPPPPPPPPLDDPELPPPPPDFMEPPPDFVPPPPPSYAGIAGSELPPPPPPPPAPAPAPV 613
Query: 91 LKSCDAAAAVAKAAPAP 107
S AVAK P P
Sbjct: 614 PDSARPPPAVAKRPPVP 630
Score = 34.3 bits (77), Expect = 0.18
Identities = 16/31 (51%), Positives = 18/31 (58%), Gaps = 4/31 (12%)
Query: 27 AAVDGFRQPLPPPPPPSSIPAP----AREPP 53
A + G P PPPPPP+ PAP AR PP
Sbjct: 591 AGIAGSELPPPPPPPPAPAPAPVPDSARPPP 621
>gi|4507909 Wiskott-Aldrich syndrome protein [Homo sapiens]
Length = 502
Score = 38.5 bits (88), Expect = 0.010
Identities = 21/53 (39%), Positives = 27/53 (50%), Gaps = 12/53 (22%)
Query: 33 RQPLPPPPPPSSIPAPAREPPGGQLLAVPAV---SVDRKGPKEGLPMGPQPPP 82
++PLPPPPPPS GG L P + + R GP +P+G PPP
Sbjct: 310 QEPLPPPPPPSR---------GGNQLPRPPIVGGNKGRSGPLPPVPLGIAPPP 353
Score = 34.3 bits (77), Expect = 0.18
Identities = 18/52 (34%), Positives = 22/52 (42%)
Query: 35 PLPPPPPPSSIPAPAREPPGGQLLAVPAVSVDRKGPKEGLPMGPQPPPEANG 86
P PPPP P P P G+ +P GP P P PPP ++G
Sbjct: 356 PRGPPPPGRGGPPPPPPPATGRSGPLPPPPPGAGGPPMPPPPPPPPPPPSSG 407
Score = 31.6 bits (70), Expect = 1.2
Identities = 22/75 (29%), Positives = 39/75 (52%), Gaps = 14/75 (18%)
Query: 6 EEEEGGSYEAMMDD--QNHNNWEAAVDGFRQPLPPPPPPSSIPAPAREPPGGQLLAVPAV 63
+E+E ++ A++ + Q N ++ G R+ LPPPP P++ E GG +P +
Sbjct: 130 DEDEAQAFRALVQEKIQKRNQRQS---GDRRQLPPPPTPAN-----EERRGG----LPPL 177
Query: 64 SVDRKGPKEGLPMGP 78
+ G + G P+GP
Sbjct: 178 PLHPGGDQGGPPVGP 192
Score = 31.2 bits (69), Expect = 1.6
Identities = 17/54 (31%), Positives = 25/54 (46%), Gaps = 3/54 (5%)
Query: 35 PLPPPPPPSSIPAPAREPPGGQLLAVPAVSVD---RKGPKEGLPMGPQPPPEAN 85
P PPP PP+ +PA P GG+ + + K P QPPP+++
Sbjct: 410 PAPPPLPPALVPAGGLAPGGGRGALLDQIRQGIQLNKTPGAPESSALQPPPQSS 463
>gi|195963316 PWWP domain containing 2A isoform b [Homo sapiens]
Length = 755
Score = 38.5 bits (88), Expect = 0.010
Identities = 26/79 (32%), Positives = 36/79 (45%), Gaps = 11/79 (13%)
Query: 14 EAMMDDQNHNNWEAAVDGFRQPLPPPPPPSSIPAPAREPPGGQL---------LAVPAVS 64
EA + D + ++A PLPPPPPP A + E G +L +A A +
Sbjct: 46 EASVPDGETDGQQSAPQADEPPLPPPPPPPGELARSPEAVGPELEAEEKLSVRVAESAAA 105
Query: 65 VDRKGPKEGLPMGPQPPPE 83
+ GP+ LP P PPE
Sbjct: 106 APQGGPE--LPPSPASPPE 122
>gi|153791982 PWWP domain containing 2A isoform a [Homo sapiens]
Length = 560
Score = 38.5 bits (88), Expect = 0.010
Identities = 26/79 (32%), Positives = 36/79 (45%), Gaps = 11/79 (13%)
Query: 14 EAMMDDQNHNNWEAAVDGFRQPLPPPPPPSSIPAPAREPPGGQL---------LAVPAVS 64
EA + D + ++A PLPPPPPP A + E G +L +A A +
Sbjct: 46 EASVPDGETDGQQSAPQADEPPLPPPPPPPGELARSPEAVGPELEAEEKLSVRVAESAAA 105
Query: 65 VDRKGPKEGLPMGPQPPPE 83
+ GP+ LP P PPE
Sbjct: 106 APQGGPE--LPPSPASPPE 122
>gi|14602439 Williams Beuren syndrome chromosome region 14 isoform
delta [Homo sapiens]
Length = 831
Score = 38.1 bits (87), Expect = 0.013
Identities = 37/123 (30%), Positives = 50/123 (40%), Gaps = 19/123 (15%)
Query: 35 PLPPP----PPPSSIPAPAREPPGGQLLAVPAVSVDRKGPKEGLPMGPQPPPEANGVIMM 90
PLP P P P S+P+PA P +LL + S GP +P G P P G
Sbjct: 448 PLPAPAAFPPTPQSVPSPAPTPFPIELLPL-GYSEPAFGPCFSMPRGKPPAPSPRG---- 502
Query: 91 LKSCDAAAAVAKAAPAPTASSTININTSTSKFLMNVITIEDYKSTYWPKLDGAIDQLLTQ 150
K+ A A A+P TA S + L ++T + P L + L +
Sbjct: 503 QKASPPTLAPATASPPTTAG-------SNNPCLTQLLTAAKPEQALEPPL---VSSTLLR 552
Query: 151 SPG 153
SPG
Sbjct: 553 SPG 555
>gi|14602437 Williams Beuren syndrome chromosome region 14 isoform
gamma [Homo sapiens]
Length = 850
Score = 38.1 bits (87), Expect = 0.013
Identities = 37/123 (30%), Positives = 50/123 (40%), Gaps = 19/123 (15%)
Query: 35 PLPPP----PPPSSIPAPAREPPGGQLLAVPAVSVDRKGPKEGLPMGPQPPPEANGVIMM 90
PLP P P P S+P+PA P +LL + S GP +P G P P G
Sbjct: 448 PLPAPAAFPPTPQSVPSPAPTPFPIELLPL-GYSEPAFGPCFSMPRGKPPAPSPRG---- 502
Query: 91 LKSCDAAAAVAKAAPAPTASSTININTSTSKFLMNVITIEDYKSTYWPKLDGAIDQLLTQ 150
K+ A A A+P TA S + L ++T + P L + L +
Sbjct: 503 QKASPPTLAPATASPPTTAG-------SNNPCLTQLLTAAKPEQALEPPL---VSSTLLR 552
Query: 151 SPG 153
SPG
Sbjct: 553 SPG 555
>gi|14602435 Williams Beuren syndrome chromosome region 14 isoform
beta [Homo sapiens]
Length = 833
Score = 38.1 bits (87), Expect = 0.013
Identities = 37/123 (30%), Positives = 50/123 (40%), Gaps = 19/123 (15%)
Query: 35 PLPPP----PPPSSIPAPAREPPGGQLLAVPAVSVDRKGPKEGLPMGPQPPPEANGVIMM 90
PLP P P P S+P+PA P +LL + S GP +P G P P G
Sbjct: 448 PLPAPAAFPPTPQSVPSPAPTPFPIELLPL-GYSEPAFGPCFSMPRGKPPAPSPRG---- 502
Query: 91 LKSCDAAAAVAKAAPAPTASSTININTSTSKFLMNVITIEDYKSTYWPKLDGAIDQLLTQ 150
K+ A A A+P TA S + L ++T + P L + L +
Sbjct: 503 QKASPPTLAPATASPPTTAG-------SNNPCLTQLLTAAKPEQALEPPL---VSSTLLR 552
Query: 151 SPG 153
SPG
Sbjct: 553 SPG 555
>gi|14602433 Williams Beuren syndrome chromosome region 14 isoform
alpha [Homo sapiens]
Length = 852
Score = 38.1 bits (87), Expect = 0.013
Identities = 37/123 (30%), Positives = 50/123 (40%), Gaps = 19/123 (15%)
Query: 35 PLPPP----PPPSSIPAPAREPPGGQLLAVPAVSVDRKGPKEGLPMGPQPPPEANGVIMM 90
PLP P P P S+P+PA P +LL + S GP +P G P P G
Sbjct: 448 PLPAPAAFPPTPQSVPSPAPTPFPIELLPL-GYSEPAFGPCFSMPRGKPPAPSPRG---- 502
Query: 91 LKSCDAAAAVAKAAPAPTASSTININTSTSKFLMNVITIEDYKSTYWPKLDGAIDQLLTQ 150
K+ A A A+P TA S + L ++T + P L + L +
Sbjct: 503 QKASPPTLAPATASPPTTAG-------SNNPCLTQLLTAAKPEQALEPPL---VSSTLLR 552
Query: 151 SPG 153
SPG
Sbjct: 553 SPG 555
>gi|126090663 zinc finger homeodomain 4 [Homo sapiens]
Length = 3571
Score = 38.1 bits (87), Expect = 0.013
Identities = 19/48 (39%), Positives = 22/48 (45%)
Query: 35 PLPPPPPPSSIPAPAREPPGGQLLAVPAVSVDRKGPKEGLPMGPQPPP 82
P PPPPPP PAP + G + VS + P P P PPP
Sbjct: 1958 PPPPPPPPPLPPAPPQPSSMGPVKIPNTVSTPLQAPPPTPPPPPPPPP 2005
Score = 31.2 bits (69), Expect = 1.6
Identities = 13/23 (56%), Positives = 13/23 (56%)
Query: 35 PLPPPPPPSSIPAPAREPPGGQL 57
P PPPPPP P P PP QL
Sbjct: 2002 PPPPPPPPPPPPPPPSAPPQVQL 2024
Score = 30.4 bits (67), Expect = 2.6
Identities = 14/32 (43%), Positives = 15/32 (46%)
Query: 35 PLPPPPPPSSIPAPAREPPGGQLLAVPAVSVD 66
P PPPPPP P P PP VS+D
Sbjct: 1998 PPPPPPPPPPPPPPPPPPPSAPPQVQLPVSLD 2029
Score = 30.0 bits (66), Expect = 3.5
Identities = 11/19 (57%), Positives = 11/19 (57%)
Query: 35 PLPPPPPPSSIPAPAREPP 53
P PPPPPP P P PP
Sbjct: 1995 PTPPPPPPPPPPPPPPPPP 2013
Score = 29.3 bits (64), Expect = 5.9
Identities = 11/19 (57%), Positives = 11/19 (57%)
Query: 35 PLPPPPPPSSIPAPAREPP 53
P PPPPPP P P PP
Sbjct: 1997 PPPPPPPPPPPPPPPPPPP 2015
>gi|226498192 atonal homolog 8 [Homo sapiens]
Length = 321
Score = 37.7 bits (86), Expect = 0.017
Identities = 28/91 (30%), Positives = 32/91 (35%), Gaps = 22/91 (24%)
Query: 8 EEGGSYEAMMDDQNHNNWEAAVDGFRQPLPPPPPPSSIPAPAREPPGGQ----------- 56
E GGS + D + G P PPPPPP PAP + PGG
Sbjct: 95 ERGGSRAPEVSDARKRCFALGAVGPGLPTPPPPPP---PAPQSQAPGGPEAQPFREPGLR 151
Query: 57 ---LLAVPAVSVDRKGPKEGLPMGPQPPPEA 84
LL P P P P PPE+
Sbjct: 152 PRILLCAPPAR-----PAPSAPPAPPAPPES 177
Score = 32.3 bits (72), Expect = 0.70
Identities = 27/66 (40%), Positives = 28/66 (42%), Gaps = 17/66 (25%)
Query: 34 QPLPPPPPPSSIPAPAREPPGGQLLA-------VPAVSVDRK--------GPKEGLPMGP 78
QP+P P P APA P GG A P VS RK GP GLP P
Sbjct: 68 QPVPVPVPVPVPVAPAVPPRGGTDTAGERGGSRAPEVSDARKRCFALGAVGP--GLPTPP 125
Query: 79 QPPPEA 84
PPP A
Sbjct: 126 PPPPPA 131
>gi|51702526 Wiskott-Aldrich syndrome gene-like protein [Homo
sapiens]
Length = 505
Score = 37.7 bits (86), Expect = 0.017
Identities = 22/53 (41%), Positives = 24/53 (45%), Gaps = 8/53 (15%)
Query: 38 PPPPPSSIP--APAREPPGGQLLAVPAVSVDRKGP------KEGLPMGPQPPP 82
PPPPPS P AP PP +AVP +R P P GP PPP
Sbjct: 310 PPPPPSRAPTAAPPPPPPSRPSVAVPPPPPNRMYPPPPPALPSSAPSGPPPPP 362
Score = 32.3 bits (72), Expect = 0.70
Identities = 21/59 (35%), Positives = 23/59 (38%), Gaps = 7/59 (11%)
Query: 26 EAAVDGFRQPLPPPPPPSSIPAPAREPPGGQLLAVPAVSVDRKGPKEGLPMGPQPPPEA 84
EA + R+ PPPPPPS P PP P S P G P PP A
Sbjct: 266 EAVKNELRRQAPPPPPPSRGGPPPPPPP-------PHNSGPPPPPARGRGAPPPPPSRA 317
Score = 32.0 bits (71), Expect = 0.91
Identities = 22/54 (40%), Positives = 25/54 (46%), Gaps = 13/54 (24%)
Query: 35 PLPP----PPPPSSIP--APAREPPGGQLLAVPAVSVDRKGPKEGLPMGPQPPP 82
P PP PPPP ++P AP+ PP P SV GP P P PPP
Sbjct: 336 PPPPNRMYPPPPPALPSSAPSGPPP-------PPPSVLGVGPVAPPPPPPPPPP 382
Score = 29.6 bits (65), Expect = 4.5
Identities = 11/21 (52%), Positives = 12/21 (57%)
Query: 35 PLPPPPPPSSIPAPAREPPGG 55
P+ PPPPP P P PP G
Sbjct: 370 PVAPPPPPPPPPPPGPPPPPG 390
>gi|6912460 GRB2-associated binding protein 2 isoform b [Homo
sapiens]
Length = 638
Score = 37.7 bits (86), Expect = 0.017
Identities = 37/151 (24%), Positives = 55/151 (36%), Gaps = 13/151 (8%)
Query: 19 DQNHNNWEAAVDGFRQPLPPPPPPSSIPAPAREPPGGQLLAVPAVSVDRKGPKEGLPMGP 78
D+NHN A G PPP PP P+ A P G P +S + + +P
Sbjct: 295 DKNHNAMTVATPGDSAIAPPPRPPK--PSQAETPRWGSPQQRPPISENSRSVAATIPRRN 352
Query: 79 QPPPEANGVIMMLKSCDAAAAVAKAAPAPTASSTININTSTSKFLMNVITIEDYKST--- 135
P N + SC+ + + S +++ FL + + ST
Sbjct: 353 TLPAMDNSRLHRASSCETYEYPQRGGES-AGRSAESMSDGVGSFLPGKMIVGRSDSTNSE 411
Query: 136 --YWPKLDGAIDQLLTQSPGD-----YIPIS 159
Y P G+ L + GD YIP+S
Sbjct: 412 DNYVPMNPGSSTLLAMERAGDNSQSVYIPMS 442
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.315 0.132 0.387
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,537,988
Number of Sequences: 37866
Number of extensions: 947748
Number of successful extensions: 14491
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 213
Number of HSP's successfully gapped in prelim test: 497
Number of HSP's that attempted gapping in prelim test: 9375
Number of HSP's gapped (non-prelim): 3789
length of query: 369
length of database: 18,247,518
effective HSP length: 104
effective length of query: 265
effective length of database: 14,309,454
effective search space: 3792005310
effective search space used: 3792005310
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.5 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.