Guide to the Human Genome
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Name: RANBP17 Sequence: fasta or formatted (1088aa) NCBI GI: 12597633
Description:

RAN binding protein 17

Referenced in:

Ran and Rag

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.0         54           2
 C cysteine            2.7         29           2
 D aspartate           5.1         56           2
 E glutamate           5.6         61           1
 F phenylalanine       5.0         54           2
 G glycine             3.7         40           2
 H histidine           1.9         21           1
 I isoleucine          5.1         55           2
 K lysine              4.9         53           2
 L leucine            14.9        162           3
 M methionine          2.8         30           2
 N asparagine          4.3         47           3
 P proline             3.7         40           2
 Q glutamine           5.6         61           2
 R arginine            4.8         52           2
 S serine              7.2         78           3
 T threonine           6.3         69           2
 V valine              7.1         77           2
 W tryptophan          0.9         10           1
 Y tyrosine            3.6         39           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   RAN binding protein 17 
XPO7                  0.691   exportin 7 isoform b 
XPO7                  0.688   exportin 7 isoform c 
XPO7                  0.688   exportin 7 isoform a 
XPO4                  0.022   exportin 4 
GOSR1                 0.004   golgi SNAP receptor complex member 1 isoform 2 [Homo...
GPI                   0.003   glucose phosphate isomerase 
FAM98B                0.003   family with sequence similarity 98, member B isofor...
FAM98B                0.003   family with sequence similarity 98, member B isofor...
GCC2                  0.003   GRIP and coiled-coil domain-containing 2 
UTP20                 0.003   down-regulated in metastasis 
LOC653877             0.003   PREDICTED: similar to Temporarily Assigned Gene name...
VPS54                 0.003   vacuolar protein sorting 54 isoform 2 
VPS54                 0.003   vacuolar protein sorting 54 isoform 1 
PLVAP                 0.002   plasmalemma vesicle associated protein 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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