Guide to the Human Genome
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Search of human proteins with 109255241

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|109255241 natural resistance-associated macrophage protein 1
[Homo sapiens]
         (550 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|109255241 natural resistance-associated macrophage protein 1 ...  1097   0.0  
gi|10835169 solute carrier family 11 (proton-coupled divalent me...   696   0.0  
gi|15718767 TRAAK [Homo sapiens]                                       35   0.14 
gi|224465184 nuclear factor I/A isoform 4 [Homo sapiens]               33   0.52 
gi|224465182 nuclear factor I/A isoform 3 [Homo sapiens]               33   0.52 
gi|30840980 nuclear factor I/A isoform 2 [Homo sapiens]                33   0.52 
gi|197927284 nuclear factor I/A isoform 1 [Homo sapiens]               33   0.52 
gi|56549675 solute carrier family 41, member 3 isoform 3 [Homo s...    33   0.52 
gi|50513245 chromatin assembly factor 1, subunit A (p150) [Homo ...    31   2.6  
gi|150456460 EPH receptor A10 isofom 3 [Homo sapiens]                  31   3.4  
gi|31542785 sec1 family domain containing 2 [Homo sapiens]             31   3.4  
gi|65508004 Wilms tumor 1 isoform D [Homo sapiens]                     30   4.4  
gi|65507908 Wilms tumor 1 isoform C [Homo sapiens]                     30   4.4  
gi|65507817 Wilms tumor 1 isoform B [Homo sapiens]                     30   4.4  
gi|65507714 Wilms tumor 1 isoform A [Homo sapiens]                     30   4.4  
gi|10181096 adenylate cyclase 6 isoform a [Homo sapiens]               30   4.4  
gi|10947061 adenylate cyclase 6 isoform b [Homo sapiens]               30   4.4  
gi|24308179 CTTNBP2 N-terminal like [Homo sapiens]                     30   4.4  
gi|5031587 adenomatosis polyposis coli 2 [Homo sapiens]                30   4.4  
gi|38787970 tensin like C1 domain containing phosphatase isoform...    30   7.5  
gi|38787957 tensin like C1 domain containing phosphatase isoform...    30   7.5  
gi|38787941 tensin like C1 domain containing phosphatase isoform...    30   7.5  
gi|7669528 neuregulin 2 isoform 2 [Homo sapiens]                       30   7.5  
gi|7669532 neuregulin 2 isoform 4 [Homo sapiens]                       30   7.5  
gi|7669530 neuregulin 2 isoform 3 [Homo sapiens]                       30   7.5  
gi|4758832 neuregulin 2 isoform 1 [Homo sapiens]                       30   7.5  
gi|56790299 pleckstrin and Sec7 domain containing [Homo sapiens]       30   7.5  
gi|170014696 transcription factor 7-like 2 isoform 2 [Homo sapiens]    29   9.8  
gi|226371627 transcription factor 7-like 2 isoform 6 [Homo sapiens]    29   9.8  
gi|226371625 transcription factor 7-like 2 isoform 5 [Homo sapiens]    29   9.8  

>gi|109255241 natural resistance-associated macrophage protein 1
           [Homo sapiens]
          Length = 550

 Score = 1097 bits (2836), Expect = 0.0
 Identities = 550/550 (100%), Positives = 550/550 (100%)

Query: 1   MTGDKGPQRLSGSSYGSISSPTSPTSPGPQQAPPRETYLSEKIPIPDTKPGTFSLRKLWA 60
           MTGDKGPQRLSGSSYGSISSPTSPTSPGPQQAPPRETYLSEKIPIPDTKPGTFSLRKLWA
Sbjct: 1   MTGDKGPQRLSGSSYGSISSPTSPTSPGPQQAPPRETYLSEKIPIPDTKPGTFSLRKLWA 60

Query: 61  FTGPGFLMSIAFLDPGNIESDLQAGAVAGFKLLWVLLWATVLGLLCQRLAARLGVVTGKD 120
           FTGPGFLMSIAFLDPGNIESDLQAGAVAGFKLLWVLLWATVLGLLCQRLAARLGVVTGKD
Sbjct: 61  FTGPGFLMSIAFLDPGNIESDLQAGAVAGFKLLWVLLWATVLGLLCQRLAARLGVVTGKD 120

Query: 121 LGEVCHLYYPKVPRTVLWLTIELAIVGSDMQEVIGTAIAFNLLSAGRIPLWGGVLITIVD 180
           LGEVCHLYYPKVPRTVLWLTIELAIVGSDMQEVIGTAIAFNLLSAGRIPLWGGVLITIVD
Sbjct: 121 LGEVCHLYYPKVPRTVLWLTIELAIVGSDMQEVIGTAIAFNLLSAGRIPLWGGVLITIVD 180

Query: 181 TFFFLFLDNYGLRKLEAFFGLLITIMALTFGYEYVVARPEQGALLRGLFLPSCPGCGHPE 240
           TFFFLFLDNYGLRKLEAFFGLLITIMALTFGYEYVVARPEQGALLRGLFLPSCPGCGHPE
Sbjct: 181 TFFFLFLDNYGLRKLEAFFGLLITIMALTFGYEYVVARPEQGALLRGLFLPSCPGCGHPE 240

Query: 241 LLQAVGIVGAIIMPHNIYLHSALVKSREIDRARRADIREANMYFLIEATIALSVSFIINL 300
           LLQAVGIVGAIIMPHNIYLHSALVKSREIDRARRADIREANMYFLIEATIALSVSFIINL
Sbjct: 241 LLQAVGIVGAIIMPHNIYLHSALVKSREIDRARRADIREANMYFLIEATIALSVSFIINL 300

Query: 301 FVMAVFGQAFYQKTNQAAFNICANSSLHDYAKIFPMNNATVAVDIYQGGVILGCLFGPAA 360
           FVMAVFGQAFYQKTNQAAFNICANSSLHDYAKIFPMNNATVAVDIYQGGVILGCLFGPAA
Sbjct: 301 FVMAVFGQAFYQKTNQAAFNICANSSLHDYAKIFPMNNATVAVDIYQGGVILGCLFGPAA 360

Query: 361 LYIWAIGLLAAGQSSTMTGTYAGQFVMEGFLRLRWSRFARVLLTRSCAILPTVLVAVFRD 420
           LYIWAIGLLAAGQSSTMTGTYAGQFVMEGFLRLRWSRFARVLLTRSCAILPTVLVAVFRD
Sbjct: 361 LYIWAIGLLAAGQSSTMTGTYAGQFVMEGFLRLRWSRFARVLLTRSCAILPTVLVAVFRD 420

Query: 421 LRDLSGLNDLLNVLQSLLLPFAVLPILTFTSMPTLMQEFANGLLNKVVTSSIMVLVCAIN 480
           LRDLSGLNDLLNVLQSLLLPFAVLPILTFTSMPTLMQEFANGLLNKVVTSSIMVLVCAIN
Sbjct: 421 LRDLSGLNDLLNVLQSLLLPFAVLPILTFTSMPTLMQEFANGLLNKVVTSSIMVLVCAIN 480

Query: 481 LYFVVSYLPSLPHPAYFGLAALLAAAYLGLSTYLVWTCCLAHGATFLAHSSHHHFLYGLL 540
           LYFVVSYLPSLPHPAYFGLAALLAAAYLGLSTYLVWTCCLAHGATFLAHSSHHHFLYGLL
Sbjct: 481 LYFVVSYLPSLPHPAYFGLAALLAAAYLGLSTYLVWTCCLAHGATFLAHSSHHHFLYGLL 540

Query: 541 EEDQKGETSG 550
           EEDQKGETSG
Sbjct: 541 EEDQKGETSG 550


>gi|10835169 solute carrier family 11 (proton-coupled divalent metal
           ion transporters), member 2 [Homo sapiens]
          Length = 561

 Score =  696 bits (1797), Expect = 0.0
 Identities = 346/543 (63%), Positives = 430/543 (79%), Gaps = 2/543 (0%)

Query: 1   MTGDKGPQRLSGSSYGSISSPTSPTSPGPQQAPPRETYLSEKIPIPDTKPGTFSLRKLWA 60
           ++GD G     G+   + S+P+   SPG  +     TY +EKI IP+ +   FS RKLWA
Sbjct: 14  VSGDHGESASLGNINPAYSNPSLSQSPGDSEEY-FATYFNEKISIPEEEYSCFSFRKLWA 72

Query: 61  FTGPGFLMSIAFLDPGNIESDLQAGAVAGFKLLWVLLWATVLGLLCQRLAARLGVVTGKD 120
           FTGPGFLMSIA+LDPGNIESDLQ+GAVAGFKLLW+LL AT++GLL QRLAARLGVVTG  
Sbjct: 73  FTGPGFLMSIAYLDPGNIESDLQSGAVAGFKLLWILLLATLVGLLLQRLAARLGVVTGLH 132

Query: 121 LGEVCHLYYPKVPRTVLWLTIELAIVGSDMQEVIGTAIAFNLLSAGRIPLWGGVLITIVD 180
           L EVCH  YPKVPR +LWL +ELAI+GSDMQEVIG+AIA NLLS GRIPLWGGVLITI D
Sbjct: 133 LAEVCHRQYPKVPRVILWLMVELAIIGSDMQEVIGSAIAINLLSVGRIPLWGGVLITIAD 192

Query: 181 TFFFLFLDNYGLRKLEAFFGLLITIMALTFGYEYVVARPEQGALLRGLFLPSCPGCGHPE 240
           TF FLFLD YGLRKLEAFFG LITIMALTFGYEYV  +P Q  +L+G+F+PSC GC  P+
Sbjct: 193 TFVFLFLDKYGLRKLEAFFGFLITIMALTFGYEYVTVKPSQSQVLKGMFVPSCSGCRTPQ 252

Query: 241 LLQAVGIVGAIIMPHNIYLHSALVKSREIDRARRADIREANMYFLIEATIALSVSFIINL 300
           + QAVGIVGA+IMPHN+YLHSALVKSR+++R  + ++REAN YF IE+ IAL VSFIIN+
Sbjct: 253 IEQAVGIVGAVIMPHNMYLHSALVKSRQVNRNNKQEVREANKYFFIESCIALFVSFIINV 312

Query: 301 FVMAVFGQAFYQKTNQAAFNICANSSLHDYAKIFPMNNATVAVDIYQGGVILGCLFGPAA 360
           FV++VF +AF+ KTN+    +C N+S   +A +FP +N+T+AVDIY+GGV+LGC FGPAA
Sbjct: 313 FVVSVFAEAFFGKTNEQVVEVCTNTS-SPHAGLFPKDNSTLAVDIYKGGVVLGCYFGPAA 371

Query: 361 LYIWAIGLLAAGQSSTMTGTYAGQFVMEGFLRLRWSRFARVLLTRSCAILPTVLVAVFRD 420
           LYIWA+G+LAAGQSSTMTGTY+GQFVMEGFL L+WSRFARV+LTRS AI+PT+LVAVF+D
Sbjct: 372 LYIWAVGILAAGQSSTMTGTYSGQFVMEGFLNLKWSRFARVVLTRSIAIIPTLLVAVFQD 431

Query: 421 LRDLSGLNDLLNVLQSLLLPFAVLPILTFTSMPTLMQEFANGLLNKVVTSSIMVLVCAIN 480
           +  L+G+ND LNVLQSL LPFA++PILTFTS+  +M +FANGL  ++    +++++C+IN
Sbjct: 432 VEHLTGMNDFLNVLQSLQLPFALIPILTFTSLRPVMSDFANGLGWRIAGGILVLIICSIN 491

Query: 481 LYFVVSYLPSLPHPAYFGLAALLAAAYLGLSTYLVWTCCLAHGATFLAHSSHHHFLYGLL 540
           +YFVV Y+  L H A + +AA+++ AYLG   YL W C +A G +FL          GLL
Sbjct: 492 MYFVVVYVRDLGHVALYVVAAVVSVAYLGFVFYLGWQCLIALGMSFLDCGHTVSISKGLL 551

Query: 541 EED 543
            E+
Sbjct: 552 TEE 554


>gi|15718767 TRAAK [Homo sapiens]
          Length = 393

 Score = 35.4 bits (80), Expect = 0.14
 Identities = 41/180 (22%), Positives = 72/180 (40%), Gaps = 32/180 (17%)

Query: 46  PDTKPGTFSLRKLWAFTGPGFLMS---IAFLDPGNIESDLQAGAVAGFKLLWVLLWATVL 102
           P+T   + S    W   G  F  S   I  +  GN+     AG +  F + + L+   + 
Sbjct: 75  PETNSTSNSSHSAWDL-GSAFFFSGTIITTIGYGNVALRTDAGRL--FCIFYALVGIPLF 131

Query: 103 GLLCQRLAARLGVVTGKDLGEVCHLYYP-KVPRTVLWLTIELAIVGSDMQEVIGTAIAFN 161
           G+L   +  RLG      +G +  ++    VP  ++                        
Sbjct: 132 GILLAGVGDRLGSSLRHGIGHIEAIFLKWHVPPELV-----------------------R 168

Query: 162 LLSAGRIPLWGGVLITIVDTFFFLFLDNYGLRKLEAFFGLLITIMALTFGYEYVVARPEQ 221
           +LSA    L G +L  +  TF F +++++   KLEA + +++T+  + FG     A P Q
Sbjct: 169 VLSAMLFLLIGCLLFVLTPTFVFCYMEDWS--KLEAIYFVIVTLTTVGFGDYVAGADPRQ 226


>gi|224465184 nuclear factor I/A isoform 4 [Homo sapiens]
          Length = 554

 Score = 33.5 bits (75), Expect = 0.52
 Identities = 20/52 (38%), Positives = 25/52 (48%), Gaps = 1/52 (1%)

Query: 3   GDKGPQRLSGSSYGSISSPTSPTSPGPQQAPPRETYLSEKIPIPDTKPGTFS 54
           G  G    +GSS G + +P  PT   P   PP        +P+PDTKP T S
Sbjct: 457 GQVGFLNPNGSSQGKVHNPFLPTPMLPPPPPP-PMARPVPLPVPDTKPPTTS 507


>gi|224465182 nuclear factor I/A isoform 3 [Homo sapiens]
          Length = 501

 Score = 33.5 bits (75), Expect = 0.52
 Identities = 20/52 (38%), Positives = 25/52 (48%), Gaps = 1/52 (1%)

Query: 3   GDKGPQRLSGSSYGSISSPTSPTSPGPQQAPPRETYLSEKIPIPDTKPGTFS 54
           G  G    +GSS G + +P  PT   P   PP        +P+PDTKP T S
Sbjct: 404 GQVGFLNPNGSSQGKVHNPFLPTPMLPPPPPP-PMARPVPLPVPDTKPPTTS 454


>gi|30840980 nuclear factor I/A isoform 2 [Homo sapiens]
          Length = 498

 Score = 33.5 bits (75), Expect = 0.52
 Identities = 20/52 (38%), Positives = 25/52 (48%), Gaps = 1/52 (1%)

Query: 3   GDKGPQRLSGSSYGSISSPTSPTSPGPQQAPPRETYLSEKIPIPDTKPGTFS 54
           G  G    +GSS G + +P  PT   P   PP        +P+PDTKP T S
Sbjct: 412 GQVGFLNPNGSSQGKVHNPFLPTPMLPPPPPP-PMARPVPLPVPDTKPPTTS 462


>gi|197927284 nuclear factor I/A isoform 1 [Homo sapiens]
          Length = 509

 Score = 33.5 bits (75), Expect = 0.52
 Identities = 20/52 (38%), Positives = 25/52 (48%), Gaps = 1/52 (1%)

Query: 3   GDKGPQRLSGSSYGSISSPTSPTSPGPQQAPPRETYLSEKIPIPDTKPGTFS 54
           G  G    +GSS G + +P  PT   P   PP        +P+PDTKP T S
Sbjct: 412 GQVGFLNPNGSSQGKVHNPFLPTPMLPPPPPP-PMARPVPLPVPDTKPPTTS 462


>gi|56549675 solute carrier family 41, member 3 isoform 3 [Homo
           sapiens]
          Length = 471

 Score = 33.5 bits (75), Expect = 0.52
 Identities = 35/112 (31%), Positives = 54/112 (48%), Gaps = 9/112 (8%)

Query: 13  SSYGSISSPTSPT-SPGPQQAPP-RETYLSEKIPIPDTKPGTFS-LRKLWAFTGPGFLMS 69
           S  G++ +P S + +P P +  P RET  S  I +  T P  F+ L   WA    G L+ 
Sbjct: 35  SEDGALRAPESQSVTPKPLETEPSRETAWS--IGLQVTVPFMFAGLGLSWA----GMLLD 88

Query: 70  IAFLDPGNIESDLQAGAVAGFKLLWVLLWATVLGLLCQRLAARLGVVTGKDL 121
               + G I+   +   V    L  + + ATV+GLL    A  LGVV+ +++
Sbjct: 89  YFQANTGQIDDPQEQHRVISSNLALIQVQATVVGLLAAVAALLLGVVSREEV 140


>gi|50513245 chromatin assembly factor 1, subunit A (p150) [Homo
           sapiens]
          Length = 956

 Score = 31.2 bits (69), Expect = 2.6
 Identities = 17/44 (38%), Positives = 25/44 (56%), Gaps = 2/44 (4%)

Query: 7   PQRLSGSSYGSISSPTSPTSPGPQQAPPRETYLSEKIPIPDTKP 50
           P+  S  S+ S+SSP+S +SP    APP++   S   P P + P
Sbjct: 276 PEEDSVLSHSSLSSPSSTSSPEGPPAPPKQH--SSTSPFPTSTP 317


>gi|150456460 EPH receptor A10 isofom 3 [Homo sapiens]
          Length = 1008

 Score = 30.8 bits (68), Expect = 3.4
 Identities = 16/57 (28%), Positives = 27/57 (47%), Gaps = 6/57 (10%)

Query: 1   MTGDKGPQRLSGSSYGSISSPTSPTSPGPQ------QAPPRETYLSEKIPIPDTKPG 51
           + G  GP   +G++Y  ++  T P +P  +      +  P+   LS + PIP   PG
Sbjct: 428 LNGVSGPAAAAGTTYAQVTVSTGPGAPWEEDEIRRDRVEPQSVSLSWREPIPAGAPG 484


>gi|31542785 sec1 family domain containing 2 [Homo sapiens]
          Length = 684

 Score = 30.8 bits (68), Expect = 3.4
 Identities = 21/78 (26%), Positives = 33/78 (42%), Gaps = 13/78 (16%)

Query: 235 GCGHPELLQAVG-------------IVGAIIMPHNIYLHSALVKSREIDRARRADIREAN 281
           GCG   LL+AVG             I G    P  +++ S L+K R ++  R    R   
Sbjct: 39  GCGSTRLLEAVGGPDCHLREFEPDAIGGGAKQPKAVFVLSCLLKGRTVEILRDIICRSHF 98

Query: 282 MYFLIEATIALSVSFIIN 299
            Y ++  T++ +V    N
Sbjct: 99  QYCVVVTTVSHAVHLTAN 116


>gi|65508004 Wilms tumor 1 isoform D [Homo sapiens]
          Length = 517

 Score = 30.4 bits (67), Expect = 4.4
 Identities = 10/30 (33%), Positives = 18/30 (60%)

Query: 13  SSYGSISSPTSPTSPGPQQAPPRETYLSEK 42
           S+YGS+  P  P +P P   PP  +++ ++
Sbjct: 114 SAYGSLGGPAPPPAPPPPPPPPPHSFIKQE 143


>gi|65507908 Wilms tumor 1 isoform C [Homo sapiens]
          Length = 500

 Score = 30.4 bits (67), Expect = 4.4
 Identities = 10/30 (33%), Positives = 18/30 (60%)

Query: 13  SSYGSISSPTSPTSPGPQQAPPRETYLSEK 42
           S+YGS+  P  P +P P   PP  +++ ++
Sbjct: 114 SAYGSLGGPAPPPAPPPPPPPPPHSFIKQE 143


>gi|65507817 Wilms tumor 1 isoform B [Homo sapiens]
          Length = 514

 Score = 30.4 bits (67), Expect = 4.4
 Identities = 10/30 (33%), Positives = 18/30 (60%)

Query: 13  SSYGSISSPTSPTSPGPQQAPPRETYLSEK 42
           S+YGS+  P  P +P P   PP  +++ ++
Sbjct: 114 SAYGSLGGPAPPPAPPPPPPPPPHSFIKQE 143


>gi|65507714 Wilms tumor 1 isoform A [Homo sapiens]
          Length = 497

 Score = 30.4 bits (67), Expect = 4.4
 Identities = 10/30 (33%), Positives = 18/30 (60%)

Query: 13  SSYGSISSPTSPTSPGPQQAPPRETYLSEK 42
           S+YGS+  P  P +P P   PP  +++ ++
Sbjct: 114 SAYGSLGGPAPPPAPPPPPPPPPHSFIKQE 143


>gi|10181096 adenylate cyclase 6 isoform a [Homo sapiens]
          Length = 1168

 Score = 30.4 bits (67), Expect = 4.4
 Identities = 16/40 (40%), Positives = 25/40 (62%), Gaps = 2/40 (5%)

Query: 471 SIMVLVCAINLYFVVSYLPSLPHPAYFGLAALLAAAYLGL 510
           +++VL+ A+ L F  +  P+ P PAY  L A  AA ++GL
Sbjct: 157 AVLVLLTAVLLAFHAA--PARPQPAYVALLACAAALFVGL 194


>gi|10947061 adenylate cyclase 6 isoform b [Homo sapiens]
          Length = 1115

 Score = 30.4 bits (67), Expect = 4.4
 Identities = 16/40 (40%), Positives = 25/40 (62%), Gaps = 2/40 (5%)

Query: 471 SIMVLVCAINLYFVVSYLPSLPHPAYFGLAALLAAAYLGL 510
           +++VL+ A+ L F  +  P+ P PAY  L A  AA ++GL
Sbjct: 157 AVLVLLTAVLLAFHAA--PARPQPAYVALLACAAALFVGL 194


>gi|24308179 CTTNBP2 N-terminal like [Homo sapiens]
          Length = 639

 Score = 30.4 bits (67), Expect = 4.4
 Identities = 15/36 (41%), Positives = 17/36 (47%)

Query: 16  GSISSPTSPTSPGPQQAPPRETYLSEKIPIPDTKPG 51
           G +SSP SP SPG +             PIP  KPG
Sbjct: 553 GKVSSPLSPLSPGIKSPTIPRAERGNPPPIPPKKPG 588


>gi|5031587 adenomatosis polyposis coli 2 [Homo sapiens]
          Length = 2303

 Score = 30.4 bits (67), Expect = 4.4
 Identities = 23/77 (29%), Positives = 29/77 (37%), Gaps = 1/77 (1%)

Query: 11   SGSSYGSISSPTSPTSPGPQQAPPRETYLSEKIPIPDTKPGTFSLRKLWAFTGPGFLMSI 70
            SG   G+IS    P SPG Q  PP  +      P P   P        W      FL   
Sbjct: 1186 SGQGSGTISPSELPDSPG-QTMPPSRSKTPPLAPAPQGPPEATQFSLQWESYVKRFLDIA 1244

Query: 71   AFLDPGNIESDLQAGAV 87
               +   + S+L AG+V
Sbjct: 1245 DCRERCRLPSELDAGSV 1261


>gi|38787970 tensin like C1 domain containing phosphatase isoform 3
           [Homo sapiens]
          Length = 1285

 Score = 29.6 bits (65), Expect = 7.5
 Identities = 15/40 (37%), Positives = 18/40 (45%), Gaps = 2/40 (5%)

Query: 1   MTGDKGPQRLSGSSYGSISSPTSPTSPGPQQAPPRETYLS 40
           +T  +GP  L GS Y  +  P   T P P   PP    LS
Sbjct: 347 LTHTRGP--LDGSPYAQVQRPPRQTPPAPSPEPPPPPMLS 384


>gi|38787957 tensin like C1 domain containing phosphatase isoform 2
           [Homo sapiens]
          Length = 1409

 Score = 29.6 bits (65), Expect = 7.5
 Identities = 15/40 (37%), Positives = 18/40 (45%), Gaps = 2/40 (5%)

Query: 1   MTGDKGPQRLSGSSYGSISSPTSPTSPGPQQAPPRETYLS 40
           +T  +GP  L GS Y  +  P   T P P   PP    LS
Sbjct: 471 LTHTRGP--LDGSPYAQVQRPPRQTPPAPSPEPPPPPMLS 508


>gi|38787941 tensin like C1 domain containing phosphatase isoform 1
           [Homo sapiens]
          Length = 1419

 Score = 29.6 bits (65), Expect = 7.5
 Identities = 15/40 (37%), Positives = 18/40 (45%), Gaps = 2/40 (5%)

Query: 1   MTGDKGPQRLSGSSYGSISSPTSPTSPGPQQAPPRETYLS 40
           +T  +GP  L GS Y  +  P   T P P   PP    LS
Sbjct: 481 LTHTRGP--LDGSPYAQVQRPPRQTPPAPSPEPPPPPMLS 518


>gi|7669528 neuregulin 2 isoform 2 [Homo sapiens]
          Length = 844

 Score = 29.6 bits (65), Expect = 7.5
 Identities = 13/32 (40%), Positives = 17/32 (53%)

Query: 2  TGDKGPQRLSGSSYGSISSPTSPTSPGPQQAP 33
          + + G    S S+  SIS P +P  P PQQ P
Sbjct: 40 SSESGSSSRSSSNNSSISRPAAPPEPRPQQQP 71


>gi|7669532 neuregulin 2 isoform 4 [Homo sapiens]
          Length = 852

 Score = 29.6 bits (65), Expect = 7.5
 Identities = 13/32 (40%), Positives = 17/32 (53%)

Query: 2  TGDKGPQRLSGSSYGSISSPTSPTSPGPQQAP 33
          + + G    S S+  SIS P +P  P PQQ P
Sbjct: 40 SSESGSSSRSSSNNSSISRPAAPPEPRPQQQP 71


>gi|7669530 neuregulin 2 isoform 3 [Homo sapiens]
          Length = 858

 Score = 29.6 bits (65), Expect = 7.5
 Identities = 13/32 (40%), Positives = 17/32 (53%)

Query: 2  TGDKGPQRLSGSSYGSISSPTSPTSPGPQQAP 33
          + + G    S S+  SIS P +P  P PQQ P
Sbjct: 40 SSESGSSSRSSSNNSSISRPAAPPEPRPQQQP 71


>gi|4758832 neuregulin 2 isoform 1 [Homo sapiens]
          Length = 850

 Score = 29.6 bits (65), Expect = 7.5
 Identities = 13/32 (40%), Positives = 17/32 (53%)

Query: 2  TGDKGPQRLSGSSYGSISSPTSPTSPGPQQAP 33
          + + G    S S+  SIS P +P  P PQQ P
Sbjct: 40 SSESGSSSRSSSNNSSISRPAAPPEPRPQQQP 71


>gi|56790299 pleckstrin and Sec7 domain containing [Homo sapiens]
          Length = 1024

 Score = 29.6 bits (65), Expect = 7.5
 Identities = 16/42 (38%), Positives = 22/42 (52%)

Query: 9   RLSGSSYGSISSPTSPTSPGPQQAPPRETYLSEKIPIPDTKP 50
           R  G+SY S++S  +  SPGP Q+P     L  + P P   P
Sbjct: 414 RAKGTSYTSLASLEALASPGPTQSPFFTFELPPQPPAPRPDP 455


>gi|170014696 transcription factor 7-like 2 isoform 2 [Homo sapiens]
          Length = 596

 Score = 29.3 bits (64), Expect = 9.8
 Identities = 18/53 (33%), Positives = 24/53 (45%), Gaps = 1/53 (1%)

Query: 5   KGPQRLSGSSYGSISSPTSPTSPGPQQAPPRETYLSEKIPIPDTKPGTFSLRK 57
           KGP    G  +  I   TSP  P    +P   TYL  K P+ D + G+   R+
Sbjct: 96  KGPP-YPGYPFIMIPDLTSPYLPNGSLSPTARTYLQMKWPLLDVQAGSLQSRQ 147


>gi|226371627 transcription factor 7-like 2 isoform 6 [Homo sapiens]
          Length = 442

 Score = 29.3 bits (64), Expect = 9.8
 Identities = 18/53 (33%), Positives = 24/53 (45%), Gaps = 1/53 (1%)

Query: 5   KGPQRLSGSSYGSISSPTSPTSPGPQQAPPRETYLSEKIPIPDTKPGTFSLRK 57
           KGP    G  +  I   TSP  P    +P   TYL  K P+ D + G+   R+
Sbjct: 96  KGPP-YPGYPFIMIPDLTSPYLPNGSLSPTARTYLQMKWPLLDVQAGSLQSRQ 147


>gi|226371625 transcription factor 7-like 2 isoform 5 [Homo sapiens]
          Length = 579

 Score = 29.3 bits (64), Expect = 9.8
 Identities = 18/53 (33%), Positives = 24/53 (45%), Gaps = 1/53 (1%)

Query: 5   KGPQRLSGSSYGSISSPTSPTSPGPQQAPPRETYLSEKIPIPDTKPGTFSLRK 57
           KGP    G  +  I   TSP  P    +P   TYL  K P+ D + G+   R+
Sbjct: 96  KGPP-YPGYPFIMIPDLTSPYLPNGSLSPTARTYLQMKWPLLDVQAGSLQSRQ 147


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.326    0.141    0.434 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 20,615,408
Number of Sequences: 37866
Number of extensions: 930689
Number of successful extensions: 4769
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 24
Number of HSP's that attempted gapping in prelim test: 4732
Number of HSP's gapped (non-prelim): 49
length of query: 550
length of database: 18,247,518
effective HSP length: 107
effective length of query: 443
effective length of database: 14,195,856
effective search space: 6288764208
effective search space used: 6288764208
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 64 (29.3 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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